AT4G18710
ERF Family

belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0015786
Physical Location & Seq
Forward (+)
10296138 .. 10301228
5091 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G18710.1

Sequence Viewer

Length: 1143 bp
ATGGCTGATGATAAGGAGATGCCTGCTGCTGTAGTTGATGGACATGATCAAGTCACTGGTCATATTATTTCCACCACAATCGGTGGCAAAAATGGTGAACCAAAACAGACAATTAGTTACATGGCGGAGCGAGTTGTTGGTACAGGCTCGTTCGGGATCGTTTTCCAAGCAAAATGTTTGGAGACTGGAGAAACCGTGGCGATAAAGAAGGTTTTGCAAGATAGAAGATACAAGAACCGAGAACTTCAGTTGATGCGTGTGATGGATCATCCGAATGTGGTTTGTTTGAAGCATTGCTTCTTTTCGACTACAAGTAAAGACGAGCTTTTCTTGAACTTGGTTATGGAGTATGTCCCTGAGAGCTTGTATCGAGTTCTGAAACATTATAGTAGTGCAAACCAAAGAATGCCTCTTGTCTATGTTAAACTTTACATGTATCAGATCTTCCGGGGACTTGCTTACATTCACAATGTTGCTGGAGTTTGTCACAGAGATCTAAAGCCTCAAAATCTTCTGGTTGATCCTCTTACTCATCAAGTCAAAATCTGTGACTTTGGCAGTGCGAAACAGCTCGTTAAAGGTGAAGCCAACATTTCTTACATCTGCTCACGATTCTACCGTGCACCCGAGCTCATATTTGGTGCCACTGAGTACACAACTTCTATTGATATCTGGTCTGCTGGTTGTGTTCTTGCTGAGCTTCTTCTTGGTCAGCCATTATTTCCCGGAGAAAATGCTGTGGATCAGCTCGTTGAAATTATAAAAGTTCTTGGTACACCAACTCGAGAAGAAATCCGTTGTATGAATCCACATTACACAGATTTCAGGTTTCCACAGATAAAGGCACATCCCTGGCACAAGATCTTCCACAAAAGGATGCCCCCAGAAGCGATTGATTTTGCATCAAGGCTGCTTCAATACTCTCCAAGTCTAAGATGCACAGCGCTCGAAGCTTGTGCACATCCGTTCTTTGATGAACTCAGAGAACCAAACGCTCGTTTACCAAATGGACGGCCTTTCCCGCCTCTCTTCAACTTCAAACAAGAAGTAGCTGGATCATCACCTGAACTGGTCAACAAGTTGATTCCAGACCATATCAAGAGACAATTGGGTCTAAGCTTCTTGAATCAATCTGGAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009593 GO:0009653 GO:0009719 GO:0009720 GO:0009725 GO:0009726 GO:0009729 GO:0009733 GO:0009741 GO:0009742 GO:0009755 GO:0009825 GO:0009888 GO:0009965 GO:0009966 GO:0009968 GO:0009987 GO:0010015 GO:0010016 GO:0010033 GO:0010053 GO:0010054 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0032880 GO:0033157 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0042802 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0046822 GO:0046824 GO:0046825 GO:0046827 GO:0048364 GO:0048366 GO:0048367 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048523 GO:0048545 GO:0048583 GO:0048585 GO:0048731 GO:0048764 GO:0048765 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051222 GO:0051223 GO:0051606 GO:0051716 GO:0060341 GO:0065007 GO:0070201 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071695 GO:0071704 GO:0071944 GO:0090087 GO:0090316 GO:0090558 GO:0090627 GO:0099402 GO:0140096 GO:1900457 GO:1900458 GO:1901564 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904951 GO:1905392
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Pkinase

Protein Analysis

380

Amino Acids

43.1

Weight (kDa)

8.43

Isoelectric Point (pI)

47.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 41 - 324 1.2e-63 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 43 - 244 1.3e-26 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015786)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G18710
fragaria_vesca FvH4_3g07480
rosa_chinensis RchiOBHm_Chr5g0011371
rosa_laevigata RLG00000031827
rosa_multiflora Rmu_co8427111.1_g000001 Rmu_sc0009975.1_g000011
rosa_roxburghii Rroxscaffold_1G00065080
rosa_rugosa Rorug04G0456500 Rorug04G0456600 Rorug04G0456600
rosa_samantha Rh5AG088300 Rh5BG083300 Rh5CG096600 Rh5DG083200
rosa_wichuraiana Rw5G007660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 761
AasI GACNNNNNNGTC 1 cut(s) 1110
AccB1I GGYRCC 1 cut(s) 641
AciI CCGC 2 cut(s) 125, 1022
AclWI GGATC 5 cut(s) 164, 273, 515, 750, 1063
AcuI CTGAAG 1 cut(s) 230
AfaI GTAC 3 cut(s) 142, 653, 775
AfeI AGCGCT 1 cut(s) 945
AflIII ACRYGT 1 cut(s) 432
AgsI TTSAA 7 cut(s) 289, 334, 755, 917, 1033, 1039, 1126
AjnI CCWGG 1 cut(s) 851
AluBI AGCT 9 cut(s) 325, 363, 571, 631, 700, 748, 953, 1052, 1119
AluI AGCT 9 cut(s) 325, 363, 571, 631, 700, 748, 953, 1052, 1119
Alw21I GWGCWC 3 cut(s) 625, 633, 961
Alw26I GTCTC 2 cut(s) 176, 1096
Alw44I GTGCAC 2 cut(s) 621, 957
AlwI GGATC 5 cut(s) 164, 273, 515, 750, 1063
Ama87I CYCGRG 2 cut(s) 626, 783
Aor51HI AGCGCT 1 cut(s) 945
AoxI GGCC 1 cut(s) 1013
ApaLI GTGCAC 2 cut(s) 621, 957
ApeKI GCWGC 2 cut(s) 26, 910
AspLEI GCGC 1 cut(s) 946
AsuC2I CCSGG 2 cut(s) 449, 726
AsuHPI GGTGA 3 cut(s) 107, 593, 1053
AvaI CYCGRG 2 cut(s) 626, 783
BaeGI GKGCMC 2 cut(s) 625, 961
BanI GGYRCC 1 cut(s) 641
BanII GRGCYC 1 cut(s) 633
BarI GAAGNNNNNNTAC 2 cut(s) 428, 460
Bbv12I GWGCWC 3 cut(s) 625, 633, 961
BbvI GCAGC 2 cut(s) 13, 897
BccI CCATC 2 cut(s) 32, 256
BceAI ACGGC 1 cut(s) 1028
BcgI CGANNNNNNTGC 4 cut(s) 928, 938, 962, 972
BciT130I CCWGG 1 cut(s) 853
BclI TGATCA 1 cut(s) 46
BcnI CCSGG 2 cut(s) 449, 726
BcoDI GTCTC 2 cut(s) 176, 1096
BfmI CTRYAG 1 cut(s) 30
BfoI RGCGCY 1 cut(s) 947
BglII AGATCT 3 cut(s) 441, 493, 861
BisI GCNGC 2 cut(s) 27, 911
BlpI GCTNAGC 1 cut(s) 696
BlsI GCNGC 2 cut(s) 28, 912
Bme1390I CCNGG 3 cut(s) 449, 726, 853
BmeT110I CYCGRG 2 cut(s) 626, 783
BmiI GGNNCC 1 cut(s) 643
BmrFI CCNGG 3 cut(s) 449, 726, 853
BmsI GCATC 5 cut(s) 9, 243, 867, 911, 926
BpmI CTGGAG 2 cut(s) 207, 498
Bpu1102I GCTNAGC 1 cut(s) 696
BpuMI CCSGG 2 cut(s) 449, 726
BsaJI CCNNGG 3 cut(s) 195, 448, 851
BsaXI ACNNNNNCTCC 2 cut(s) 180, 210
Bse1I ACTGG 3 cut(s) 61, 190, 1074
Bse3DI GCAATG 1 cut(s) 292
BseBI CCWGG 1 cut(s) 853
BseDI CCNNGG 3 cut(s) 195, 448, 851
BseGI GGATG 4 cut(s) 268, 847, 882, 961
BseMI GCAATG 1 cut(s) 292
BseMII CTCAG 4 cut(s) 348, 639, 687, 994
BseNI ACTGG 3 cut(s) 61, 190, 1074
BseSI GKGCMC 2 cut(s) 625, 961
BseXI GCAGC 2 cut(s) 13, 897
BshFI GGCC 1 cut(s) 1015
BshNI GGYRCC 1 cut(s) 641
BsiHKAI GWGCWC 3 cut(s) 625, 633, 961
BsiHKCI CYCGRG 2 cut(s) 626, 783
BsiSI CCGG 2 cut(s) 448, 726
BslFI GGGAC 2 cut(s) 338, 465
BsmAI GTCTC 2 cut(s) 176, 1096
BsmFI GGGAC 2 cut(s) 338, 465
BsmI GAATGC 1 cut(s) 411
BsnI GGCC 1 cut(s) 1015
BsoBI CYCGRG 2 cut(s) 626, 783
Bsp1286I GDGCHC 3 cut(s) 625, 633, 961
Bsp143I GATC 9 cut(s) 46, 156, 265, 441, 493, 520, 742, 861, 1055
Bsp1720I GCTNAGC 1 cut(s) 696
BspACI CCGC 2 cut(s) 125, 1022
BspANI GGCC 1 cut(s) 1015
BspCNI CTCAG 4 cut(s) 349, 640, 688, 993
BspLI GGNNCC 1 cut(s) 643
BspPI GGATC 5 cut(s) 164, 273, 515, 750, 1063
BspT107I GGYRCC 1 cut(s) 641
BsrDI GCAATG 1 cut(s) 292
BsrI ACTGG 3 cut(s) 61, 190, 1074
BssECI CCNNGG 3 cut(s) 195, 448, 851
BssMI GATC 9 cut(s) 46, 156, 265, 441, 493, 520, 742, 861, 1055
Bst2UI CCWGG 1 cut(s) 853
Bst4CI ACNGT 2 cut(s) 196, 620
Bst6I CTCTTC 1 cut(s) 1034
BstC8I GCNNGC 1 cut(s) 24
BstDEI CTNAG 6 cut(s) 357, 648, 696, 932, 980, 1115
BstDSI CCRYGG 1 cut(s) 195
BstF5I GGATG 4 cut(s) 268, 847, 882, 961
BstH2I RGCGCY 1 cut(s) 947
BstHHI GCGC 1 cut(s) 946
BstKTI GATC 9 cut(s) 49, 159, 268, 444, 496, 523, 745, 864, 1058
BstMAI GTCTC 2 cut(s) 176, 1096
BstMBI GATC 9 cut(s) 46, 156, 265, 441, 493, 520, 742, 861, 1055
BstMWI GCNNNNNNNGC 2 cut(s) 950, 1021
BstNI CCWGG 1 cut(s) 853
BstNSI RCATGY 1 cut(s) 436
BstSCI CCNGG 3 cut(s) 447, 724, 851
BstSFI CTRYAG 1 cut(s) 30
BstSLI GKGCMC 2 cut(s) 625, 961
BstV1I GCAGC 2 cut(s) 13, 897
BstX2I RGATCY 3 cut(s) 441, 493, 861
BstYI RGATCY 3 cut(s) 441, 493, 861
BsuRI GGCC 1 cut(s) 1015
BtgI CCRYGG 1 cut(s) 195
BtsCI GGATG 4 cut(s) 268, 847, 882, 961
BtsI GCAGTG 1 cut(s) 565
BtsIMutI CAGTG 3 cut(s) 54, 565, 645
Cac8I GCNNGC 1 cut(s) 24
CfoI GCGC 1 cut(s) 946
Csp6I GTAC 3 cut(s) 141, 652, 774
CviAII CATG 3 cut(s) 44, 121, 433
CviQI GTAC 3 cut(s) 141, 652, 774
DdeI CTNAG 6 cut(s) 357, 648, 696, 932, 980, 1115
DpnI GATC 9 cut(s) 48, 158, 267, 443, 495, 522, 744, 863, 1057
DpnII GATC 9 cut(s) 46, 156, 265, 441, 493, 520, 742, 861, 1055
DrdI GACNNNNNNGTC 1 cut(s) 1110
DseDI GACNNNNNNGTC 1 cut(s) 1110
Eam1104I CTCTTC 1 cut(s) 1034
EarI CTCTTC 1 cut(s) 1034
EciI GGCGGA 1 cut(s) 140
Ecl136II GAGCTC 1 cut(s) 631
Eco24I GRGCYC 1 cut(s) 633
Eco32I GATATC 1 cut(s) 670
Eco47III AGCGCT 1 cut(s) 945
Eco53kI GAGCTC 1 cut(s) 631
Eco57I CTGAAG 1 cut(s) 230
Eco88I CYCGRG 2 cut(s) 626, 783
EcoICRI GAGCTC 1 cut(s) 631
EcoRII CCWGG 1 cut(s) 851
EcoRV GATATC 1 cut(s) 670
EcoT38I GRGCYC 1 cut(s) 633
FaeI CATG 3 cut(s) 47, 124, 436
FalI AAGNNNNNCTT 4 cut(s) 281, 313, 309, 341
FaqI GGGAC 2 cut(s) 338, 465
FatI CATG 3 cut(s) 43, 120, 432
FauI CCCGC 1 cut(s) 1029
FbaI TGATCA 1 cut(s) 46
Fnu4HI GCNGC 2 cut(s) 27, 911
FokI GGATG 4 cut(s) 255, 834, 889, 948
FriOI GRGCYC 1 cut(s) 633
Fsp4HI GCNGC 2 cut(s) 27, 911
GlaI GCGC 1 cut(s) 945
GluI GCNGC 2 cut(s) 27, 911
GsuI CTGGAG 2 cut(s) 207, 498
HaeII RGCGCY 1 cut(s) 947
HaeIII GGCC 1 cut(s) 1015
HapII CCGG 2 cut(s) 448, 726
HhaI GCGC 1 cut(s) 946
Hin1II CATG 3 cut(s) 47, 124, 436
Hin6I GCGC 1 cut(s) 944
HinP1I GCGC 1 cut(s) 944
HincII GTYRAC 1 cut(s) 1075
HindII GTYRAC 1 cut(s) 1075
HindIII AAGCTT 2 cut(s) 951, 1117
HinfI GANTC 4 cut(s) 612, 805, 1084, 1126
HpaII CCGG 2 cut(s) 448, 726
HphI GGTGA 3 cut(s) 107, 593, 1053
Hpy166II GTNNAC 7 cut(s) 98, 623, 654, 776, 959, 1001, 1075
Hpy188I TCNGA 4 cut(s) 273, 378, 441, 983
Hpy188III TCNNGA 8 cut(s) 154, 331, 609, 785, 1088, 1099, 1123, 1134
Hpy8I GTNNAC 7 cut(s) 98, 623, 654, 776, 959, 1001, 1075
HpyAV CCTTC 1 cut(s) 202
HpyCH4III ACNGT 2 cut(s) 196, 620
HpyCH4V TGCA 6 cut(s) 217, 395, 623, 902, 939, 959
HpyF10VI GCNNNNNNNGC 2 cut(s) 950, 1021
HpyF3I CTNAG 6 cut(s) 357, 648, 696, 932, 980, 1115
Hsp92II CATG 3 cut(s) 47, 124, 436
HspAI GCGC 1 cut(s) 944
Ksp22I TGATCA 1 cut(s) 46
Kzo9I GATC 9 cut(s) 46, 156, 265, 441, 493, 520, 742, 861, 1055
LmnI GCTCC 1 cut(s) 127
Lsp1109I GCAGC 2 cut(s) 13, 897
LweI GCATC 5 cut(s) 9, 243, 867, 911, 926
MaeIII GTNAC 4 cut(s) 52, 116, 485, 548
MalI GATC 9 cut(s) 48, 158, 267, 443, 495, 522, 744, 863, 1057
MboI GATC 9 cut(s) 46, 156, 265, 441, 493, 520, 742, 861, 1055
MboII GAAGA 7 cut(s) 237, 436, 503, 695, 800, 856, 1021
MfeI CAATTG 1 cut(s) 1106
MflI RGATCY 3 cut(s) 441, 493, 861
MhlI GDGCHC 3 cut(s) 625, 633, 961
MluCI AATT 3 cut(s) 111, 756, 1106
MnlI CCTC 4 cut(s) 420, 513, 534, 1035
MseI TTAA 3 cut(s) 423, 576, 1141
MslI CAYNNNNRTG 1 cut(s) 273
MspI CCGG 2 cut(s) 448, 726
MspR9I CCNGG 3 cut(s) 449, 726, 853
MunI CAATTG 1 cut(s) 1106
Mva1269I GAATGC 1 cut(s) 411
MvaI CCWGG 1 cut(s) 853
MwoI GCNNNNNNNGC 2 cut(s) 950, 1021
NciI CCSGG 2 cut(s) 449, 726
NdeII GATC 9 cut(s) 46, 156, 265, 441, 493, 520, 742, 861, 1055
NlaIII CATG 3 cut(s) 47, 124, 436
NlaIV GGNNCC 1 cut(s) 643
NmuCI GTSAC 3 cut(s) 52, 485, 548
NspI RCATGY 1 cut(s) 436
PaeR7I CTCGAG 1 cut(s) 783
PciI ACATGT 1 cut(s) 432
PcsI WCGNNNNNNNCGW 1 cut(s) 616
PctI GAATGC 1 cut(s) 411
PfeI GAWTC 4 cut(s) 612, 805, 1084, 1126
PfoI TCCNGGA 1 cut(s) 724
PkrI GCNGC 2 cut(s) 28, 912
PscI ACATGT 1 cut(s) 432
PsiI TTATAA 1 cut(s) 761
Psp124BI GAGCTC 1 cut(s) 633
Psp6I CCWGG 1 cut(s) 851
PspGI CCWGG 1 cut(s) 851
PspN4I GGNNCC 1 cut(s) 643
PsuI RGATCY 3 cut(s) 441, 493, 861
RsaI GTAC 3 cut(s) 142, 653, 775
RsaNI GTAC 3 cut(s) 141, 652, 774
RseI CAYNNNNRTG 1 cut(s) 273
SacI GAGCTC 1 cut(s) 633
SaqAI TTAA 3 cut(s) 423, 576, 1141
SatI GCNGC 2 cut(s) 27, 911
Sau3AI GATC 9 cut(s) 46, 156, 265, 441, 493, 520, 742, 861, 1055
ScrFI CCNGG 3 cut(s) 449, 726, 853
SduI GDGCHC 3 cut(s) 625, 633, 961
SfaNI GCATC 5 cut(s) 9, 243, 867, 911, 926
SfcI CTRYAG 1 cut(s) 30
Sfr274I CTCGAG 1 cut(s) 783
SlaI CTCGAG 1 cut(s) 783
SmiMI CAYNNNNRTG 1 cut(s) 273
SmlI CTYRAG 1 cut(s) 783
SmoI CTYRAG 1 cut(s) 783
Sse9I AATT 3 cut(s) 111, 756, 1106
SsiI CCGC 2 cut(s) 125, 1022
SstI GAGCTC 1 cut(s) 633
StyD4I CCNGG 3 cut(s) 447, 724, 851
TaaI ACNGT 2 cut(s) 196, 620
TaqI TCGA 4 cut(s) 305, 370, 784, 948
TasI AATT 3 cut(s) 111, 756, 1106
TatI WGTACW 1 cut(s) 651
TfiI GAWTC 4 cut(s) 612, 805, 1084, 1126
Tru1I TTAA 3 cut(s) 423, 576, 1141
Tru9I TTAA 3 cut(s) 423, 576, 1141
TscAI CASTG 3 cut(s) 61, 565, 652
TseFI GTSAC 3 cut(s) 52, 485, 548
TseI GCWGC 2 cut(s) 26, 910
Tsp45I GTSAC 3 cut(s) 52, 485, 548
TspDTI ATGAA 2 cut(s) 818, 990
TspGWI ACGGA 2 cut(s) 785, 954
TspRI CASTG 3 cut(s) 61, 565, 652
VneI GTGCAC 2 cut(s) 621, 957
XceI RCATGY 1 cut(s) 436
XhoI CTCGAG 1 cut(s) 783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.