FvH4_3g07480
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
4424884 .. 4429735
4852 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g07480.t1

Sequence Viewer

Length: 1140 bp
ATGGCTGATGATAAGGAAATGGCTGCTTCTGTCGTAGATGGTAGCGATCCAACTGGTCATATAATTTCCACAACCATAGGAGGCAAAAATGGAGAGCCCAAACAGACCATTAGTTATATGGCAGAGCGTGTTGTGGGAACTGGGTCATTTGGAATTGTATTCCAGGCGAAATGCTTGGAAACTGGTGAGACTGTGGCCATAAAGAAGGTTTTACAGGACAGAAGGTATAAGAACAGGGAACTTCAATTGATGCGTGTAATGGATCATCCAAATGTGATTTGTTTGAAGCATTGTTTCTTCTCTACAACAAGCAAAAATGAGCTTTTTCTCAATTTGGTTATGGAATATGTTCCGGAGACTATGTATCGGGTTATAAAGCATTACAGCAATGCAAACCAGAGAATGCCCCTTGTCTATGTCAAACTTTACATGTACCAGATTTTCAGAGGGCTGGCTTACATACACACCGTTCCTGGAGTTTGCCATAGAGATTTGAAGCCTCAAAATTTATTGGTTGATCCTCTTACTCACCAGGTCAAGCTTTGTGATTTTGGAAGTGCCAAAATGCTGGTGAAAGGCGAAGCAAACATAGCATACATATGTTCACGTTTCTATCGGGCTCCTGAACTAATTTTTGGTGCAACGGATTATACAACTTCAATTGATATCTGGTCAGCTGGCTGTGTCTTAGCAGAGCTTCTTTTGGGCCAGCCTTTGTTTCCTGGAGAAAATGCAGTGGACCAACTTGTAGAGATCATCAAGGTTCTGGGAACACCAACACGTGAAGAAATTCGCTGTATGAATCCAAATTATACAGATTTCAGGTTTCCACAGATAAAAGCACACCCTTGGCACAAGGTTTTCCACAAGCGCATGCCACCAGAAGCAATTGATCTGGCTTCAAGACTGCTGCAATACTCTCCAAGTCTTCGTTGCACAGCTCTGGAAGCATGTGCACATCCTTTCTTTGACGAACTCCGTGAGCCCAATGCCCGCCTACCAAATGGTCGTGCATTTCCTCCGCTCTTTAATTTTAAGCAAGAGTTGTCCAGCGCTTCTCCAGAACTTGTCAACAAGTTGATTCCTGATCATGTGAAACGCCAAATGGGTCTCGCTTTCTTGCATCCGCCCGGCACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009593 GO:0009653 GO:0009719 GO:0009720 GO:0009725 GO:0009726 GO:0009729 GO:0009733 GO:0009741 GO:0009742 GO:0009755 GO:0009825 GO:0009888 GO:0009965 GO:0009966 GO:0009968 GO:0009987 GO:0010015 GO:0010016 GO:0010033 GO:0010053 GO:0010054 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022622 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0032880 GO:0033157 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0042802 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0046822 GO:0046824 GO:0046825 GO:0046827 GO:0048364 GO:0048366 GO:0048367 GO:0048468 GO:0048469 GO:0048518 GO:0048519 GO:0048523 GO:0048545 GO:0048583 GO:0048585 GO:0048731 GO:0048764 GO:0048765 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051222 GO:0051223 GO:0051606 GO:0051716 GO:0060341 GO:0065007 GO:0070201 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071695 GO:0071704 GO:0071944 GO:0090087 GO:0090316 GO:0090558 GO:0090627 GO:0099402 GO:0140096 GO:1900457 GO:1900458 GO:1901564 GO:1901700 GO:1901701 GO:1903827 GO:1903829 GO:1904951 GO:1905392
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

380

Amino Acids

42.9

Weight (kDa)

8.58

Isoelectric Point (pI)

41.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 40 - 323 2.4e-61 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 42 - 243 3.6e-24 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015786)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 374
AccBSI CCGCTC 1 cut(s) 1024
AccIII TCCGGA 1 cut(s) 352
AciI CCGC 3 cut(s) 994, 1022, 1127
AclWI GGATC 3 cut(s) 41, 270, 512
AcoI YGGCCR 1 cut(s) 195
AcsI RAATTY 2 cut(s) 505, 789
AcvI CACGTG 1 cut(s) 782
AfaI GTAC 1 cut(s) 434
AfeI AGCGCT 1 cut(s) 1054
AflIII ACRYGT 2 cut(s) 429, 779
AgsI TTSAA 5 cut(s) 245, 286, 496, 660, 903
AjnI CCWGG 4 cut(s) 162, 472, 531, 721
AjuI GAANNNNNNNTTGG 2 cut(s) 618, 650
AluBI AGCT 5 cut(s) 322, 541, 677, 697, 941
AluI AGCT 5 cut(s) 322, 541, 677, 697, 941
Alw21I GWGCWC 1 cut(s) 958
Alw26I GTCTC 3 cut(s) 182, 350, 1115
Alw44I GTGCAC 1 cut(s) 954
AlwI GGATC 3 cut(s) 41, 270, 512
Aor13HI TCCGGA 1 cut(s) 352
Aor51HI AGCGCT 1 cut(s) 1054
AoxI GGCC 2 cut(s) 195, 706
ApaLI GTGCAC 1 cut(s) 954
ApeKI GCWGC 2 cut(s) 23, 910
ApoI RAATTY 2 cut(s) 505, 789
Asp700I GAANNNNTTC 2 cut(s) 348, 789
AspLEI GCGC 2 cut(s) 873, 1055
AspS9I GGNCC 2 cut(s) 706, 739
AsuC2I CCSGG 1 cut(s) 1131
AsuHPI GGTGA 3 cut(s) 197, 521, 583
AvaII GGWCC 1 cut(s) 739
BaeGI GKGCMC 1 cut(s) 958
BalI TGGCCA 1 cut(s) 197
BanII GRGCYC 3 cut(s) 99, 622, 987
BbrPI CACGTG 1 cut(s) 782
BbsI GAAGAC 1 cut(s) 920
Bbv12I GWGCWC 1 cut(s) 958
BbvI GCAGC 2 cut(s) 10, 897
BccI CCATC 1 cut(s) 32
BciT130I CCWGG 4 cut(s) 164, 474, 533, 723
BclI TGATCA 1 cut(s) 1087
BcnI CCSGG 1 cut(s) 1131
BcoDI GTCTC 3 cut(s) 182, 350, 1115
BfoI RGCGCY 1 cut(s) 1056
BisI GCNGC 2 cut(s) 24, 911
BlsI GCNGC 2 cut(s) 25, 912
Bme1390I CCNGG 5 cut(s) 164, 474, 533, 723, 1131
Bme18I GGWCC 1 cut(s) 739
BmgT120I GGNCC 2 cut(s) 706, 739
BmiI GGNNCC 1 cut(s) 621
BmrFI CCNGG 5 cut(s) 164, 474, 533, 723, 1131
BmrI ACTGGG 1 cut(s) 150
BmsI GCATC 2 cut(s) 240, 1132
BmuI ACTGGG 1 cut(s) 150
BpiI GAAGAC 1 cut(s) 920
BpmI CTGGAG 3 cut(s) 495, 744, 1044
BpuMI CCSGG 1 cut(s) 1131
BsaAI YACGTR 1 cut(s) 782
BsaI GGTCTC 1 cut(s) 1115
BsaJI CCNNGG 1 cut(s) 848
BsaWI WCCGGW 1 cut(s) 352
BsaXI ACNNNNNCTCC 2 cut(s) 347, 377
Bse1I ACTGG 3 cut(s) 58, 145, 187
Bse3DI GCAATG 1 cut(s) 394
BseAI TCCGGA 1 cut(s) 352
BseBI CCWGG 4 cut(s) 164, 474, 533, 723
BseDI CCNNGG 1 cut(s) 848
BseGI GGATG 3 cut(s) 265, 958, 1123
BseMI GCAATG 1 cut(s) 394
BseNI ACTGG 3 cut(s) 58, 145, 187
BseSI GKGCMC 1 cut(s) 958
BseXI GCAGC 2 cut(s) 10, 897
BshFI GGCC 2 cut(s) 197, 708
BsiHKAI GWGCWC 1 cut(s) 958
BsiSI CCGG 2 cut(s) 353, 1131
BsmAI GTCTC 3 cut(s) 182, 350, 1115
BsmI GAATGC 1 cut(s) 408
BsnI GGCC 2 cut(s) 197, 708
Bso31I GGTCTC 1 cut(s) 1115
Bsp1286I GDGCHC 4 cut(s) 99, 622, 958, 987
Bsp13I TCCGGA 1 cut(s) 352
Bsp143I GATC 6 cut(s) 46, 262, 517, 753, 892, 1087
BspACI CCGC 3 cut(s) 994, 1022, 1127
BspANI GGCC 2 cut(s) 197, 708
BspEI TCCGGA 1 cut(s) 352
BspLI GGNNCC 1 cut(s) 621
BspPI GGATC 3 cut(s) 41, 270, 512
BspTNI GGTCTC 1 cut(s) 1115
BsrBI CCGCTC 1 cut(s) 1024
BsrDI GCAATG 1 cut(s) 394
BsrI ACTGG 3 cut(s) 58, 145, 187
BssECI CCNNGG 1 cut(s) 848
BssMI GATC 6 cut(s) 46, 262, 517, 753, 892, 1087
BssT1I CCWWGG 1 cut(s) 848
Bst2UI CCWGG 4 cut(s) 164, 474, 533, 723
Bst4CI ACNGT 2 cut(s) 193, 469
BstBAI YACGTR 1 cut(s) 782
BstC8I GCNNGC 5 cut(s) 453, 679, 710, 875, 994
BstDEI CTNAG 1 cut(s) 688
BstF5I GGATG 3 cut(s) 265, 958, 1123
BstH2I RGCGCY 1 cut(s) 1056
BstHHI GCGC 2 cut(s) 873, 1055
BstKTI GATC 6 cut(s) 49, 265, 520, 756, 895, 1090
BstMAI GTCTC 3 cut(s) 182, 350, 1115
BstMBI GATC 6 cut(s) 46, 262, 517, 753, 892, 1087
BstMWI GCNNNNNNNGC 2 cut(s) 590, 947
BstNI CCWGG 4 cut(s) 164, 474, 533, 723
BstNSI RCATGY 3 cut(s) 433, 877, 954
BstSCI CCNGG 5 cut(s) 162, 472, 531, 721, 1129
BstSLI GKGCMC 1 cut(s) 958
BstV1I GCAGC 2 cut(s) 10, 897
BstV2I GAAGAC 1 cut(s) 920
BstXI CCANNNNNNTGG 1 cut(s) 568
BsuRI GGCC 2 cut(s) 197, 708
BtsCI GGATG 3 cut(s) 265, 958, 1123
BtsI GCAGTG 1 cut(s) 741
BtsIMutI CAGTG 1 cut(s) 741
Cac8I GCNNGC 5 cut(s) 453, 679, 710, 875, 994
CfoI GCGC 2 cut(s) 873, 1055
Cfr13I GGNCC 2 cut(s) 706, 739
CsiI ACCWGGT 1 cut(s) 531
Csp6I GTAC 1 cut(s) 433
CviAII CATG 4 cut(s) 430, 874, 951, 1091
CviQI GTAC 1 cut(s) 433
DdeI CTNAG 1 cut(s) 688
DpnI GATC 6 cut(s) 48, 264, 519, 755, 894, 1089
DpnII GATC 6 cut(s) 46, 262, 517, 753, 892, 1087
EaeI YGGCCR 1 cut(s) 195
EciI GGCGGA 1 cut(s) 1116
Eco130I CCWWGG 1 cut(s) 848
Eco24I GRGCYC 3 cut(s) 99, 622, 987
Eco31I GGTCTC 1 cut(s) 1115
Eco32I GATATC 1 cut(s) 667
Eco47I GGWCC 1 cut(s) 739
Eco47III AGCGCT 1 cut(s) 1054
Eco72I CACGTG 1 cut(s) 782
EcoRII CCWGG 4 cut(s) 162, 472, 531, 721
EcoRV GATATC 1 cut(s) 667
EcoT14I CCWWGG 1 cut(s) 848
EcoT38I GRGCYC 3 cut(s) 99, 622, 987
ErhI CCWWGG 1 cut(s) 848
FaeI CATG 4 cut(s) 433, 877, 954, 1094
FatI CATG 4 cut(s) 429, 873, 950, 1090
FauI CCCGC 1 cut(s) 1001
FauNDI CATATG 1 cut(s) 599
FbaI TGATCA 1 cut(s) 1087
Fnu4HI GCNGC 2 cut(s) 24, 911
FokI GGATG 3 cut(s) 252, 945, 1110
FriOI GRGCYC 3 cut(s) 99, 622, 987
Fsp4HI GCNGC 2 cut(s) 24, 911
GlaI GCGC 2 cut(s) 872, 1054
GluI GCNGC 2 cut(s) 24, 911
GsuI CTGGAG 3 cut(s) 495, 744, 1044
HaeII RGCGCY 1 cut(s) 1056
HaeIII GGCC 2 cut(s) 197, 708
HapII CCGG 2 cut(s) 353, 1131
HhaI GCGC 2 cut(s) 873, 1055
Hin1II CATG 4 cut(s) 433, 877, 954, 1094
Hin6I GCGC 2 cut(s) 871, 1053
HinP1I GCGC 2 cut(s) 871, 1053
HincII GTYRAC 1 cut(s) 1072
HindII GTYRAC 1 cut(s) 1072
HindIII AAGCTT 1 cut(s) 539
HinfI GANTC 2 cut(s) 802, 1081
HpaII CCGG 2 cut(s) 353, 1131
HphI GGTGA 3 cut(s) 197, 521, 583
Hpy166II GTNNAC 4 cut(s) 605, 739, 956, 1072
Hpy188I TCNGA 1 cut(s) 446
Hpy188III TCNNGA 6 cut(s) 353, 623, 903, 944, 1061, 1085
Hpy8I GTNNAC 4 cut(s) 605, 739, 956, 1072
HpyAV CCTTC 2 cut(s) 199, 216
HpyCH4III ACNGT 2 cut(s) 193, 469
HpyCH4IV ACGT 2 cut(s) 607, 781
HpyCH4V TGCA 8 cut(s) 392, 641, 734, 913, 936, 956, 1013, 1123
HpyF10VI GCNNNNNNNGC 2 cut(s) 590, 947
HpyF3I CTNAG 1 cut(s) 688
HpySE526I ACGT 2 cut(s) 607, 781
Hsp92II CATG 4 cut(s) 433, 877, 954, 1094
HspAI GCGC 2 cut(s) 871, 1053
Kpn2I TCCGGA 1 cut(s) 352
Ksp22I TGATCA 1 cut(s) 1087
Kzo9I GATC 6 cut(s) 46, 262, 517, 753, 892, 1087
LmnI GCTCC 1 cut(s) 625
Lsp1109I GCAGC 2 cut(s) 10, 897
LweI GCATC 2 cut(s) 240, 1132
MabI ACCWGGT 1 cut(s) 531
MaeII ACGT 2 cut(s) 607, 781
MalI GATC 6 cut(s) 48, 264, 519, 755, 894, 1089
MbiI CCGCTC 1 cut(s) 1024
MboI GATC 6 cut(s) 46, 262, 517, 753, 892, 1087
MboII GAAGA 3 cut(s) 289, 797, 920
MfeI CAATTG 3 cut(s) 245, 660, 888
MhlI GDGCHC 4 cut(s) 99, 622, 958, 987
MlsI TGGCCA 1 cut(s) 197
MluNI TGGCCA 1 cut(s) 197
MmeI TCCRAC 1 cut(s) 74
MnlI CCTC 5 cut(s) 74, 440, 510, 531, 1029
Mox20I TGGCCA 1 cut(s) 197
MroI TCCGGA 1 cut(s) 352
MroXI GAANNNNTTC 2 cut(s) 348, 789
MscI TGGCCA 1 cut(s) 197
MseI TTAA 2 cut(s) 1029, 1035
MslI CAYNNNNRTG 2 cut(s) 270, 598
Msp20I TGGCCA 1 cut(s) 197
MspA1I CMGCKG 1 cut(s) 677
MspI CCGG 2 cut(s) 353, 1131
MspR9I CCNGG 5 cut(s) 164, 474, 533, 723, 1131
MunI CAATTG 3 cut(s) 245, 660, 888
Mva1269I GAATGC 1 cut(s) 408
MvaI CCWGG 4 cut(s) 164, 474, 533, 723
MwoI GCNNNNNNNGC 2 cut(s) 590, 947
NciI CCSGG 1 cut(s) 1131
NdeI CATATG 1 cut(s) 599
NdeII GATC 6 cut(s) 46, 262, 517, 753, 892, 1087
NlaIII CATG 4 cut(s) 433, 877, 954, 1094
NlaIV GGNNCC 1 cut(s) 621
NspI RCATGY 3 cut(s) 433, 877, 954
PaeI GCATGC 1 cut(s) 877
PciI ACATGT 1 cut(s) 429
PctI GAATGC 1 cut(s) 408
PdmI GAANNNNTTC 2 cut(s) 348, 789
PfeI GAWTC 2 cut(s) 802, 1081
PfoI TCCNGGA 2 cut(s) 472, 721
PkrI GCNGC 2 cut(s) 25, 912
PmaCI CACGTG 1 cut(s) 782
PmlI CACGTG 1 cut(s) 782
Ppu21I YACGTR 1 cut(s) 782
PscI ACATGT 1 cut(s) 429
PsiI TTATAA 1 cut(s) 374
Psp6I CCWGG 4 cut(s) 162, 472, 531, 721
PspCI CACGTG 1 cut(s) 782
PspGI CCWGG 4 cut(s) 162, 472, 531, 721
PspN4I GGNNCC 1 cut(s) 621
PspPI GGNCC 2 cut(s) 706, 739
PvuII CAGCTG 1 cut(s) 677
RsaI GTAC 1 cut(s) 434
RsaNI GTAC 1 cut(s) 433
RseI CAYNNNNRTG 2 cut(s) 270, 598
SaqAI TTAA 2 cut(s) 1029, 1035
SatI GCNGC 2 cut(s) 24, 911
Sau3AI GATC 6 cut(s) 46, 262, 517, 753, 892, 1087
Sau96I GGNCC 2 cut(s) 706, 739
ScrFI CCNGG 5 cut(s) 164, 474, 533, 723, 1131
SduI GDGCHC 4 cut(s) 99, 622, 958, 987
SexAI ACCWGGT 1 cut(s) 531
SfaNI GCATC 2 cut(s) 240, 1132
SinI GGWCC 1 cut(s) 739
SmiMI CAYNNNNRTG 2 cut(s) 270, 598
SphI GCATGC 1 cut(s) 877
SsiI CCGC 3 cut(s) 994, 1022, 1127
StyD4I CCNGG 5 cut(s) 162, 472, 531, 721, 1129
StyI CCWWGG 1 cut(s) 848
TaaI ACNGT 2 cut(s) 193, 469
TaiI ACGT 2 cut(s) 610, 784
TfiI GAWTC 2 cut(s) 802, 1081
Tru1I TTAA 2 cut(s) 1029, 1035
Tru9I TTAA 2 cut(s) 1029, 1035
TscAI CASTG 1 cut(s) 741
TseI GCWGC 2 cut(s) 23, 910
TspDTI ATGAA 1 cut(s) 815
TspGWI ACGGA 2 cut(s) 659, 968
TspRI CASTG 1 cut(s) 741
VneI GTGCAC 1 cut(s) 954
VpaK11BI GGWCC 1 cut(s) 739
XapI RAATTY 2 cut(s) 505, 789
XceI RCATGY 3 cut(s) 433, 877, 954
XcmI CCANNNNNNNNNTGG 1 cut(s) 115
XmnI GAANNNNTTC 2 cut(s) 348, 789
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.