Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015880

Physical Location & Seq

Genomic Coordinates Reverse (-)

14143958 .. 14147537

Gene Structure 3580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G28650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3042 bp

ATGAAGATGAAGATAATAGTTCTCTTCCTTTACTACTGTTACATTGGTTCTACTTCCTCTGTTTTAGCTTCCATCGACAATGTCAACGAGCTCTCTGTTTTGCTGTCGGTGAAATCAACTCTTGTGGATCCTCTCAACTTTCTCAAAGACTGGAAGCTTTCAGACACCAGCGATCACTGTAATTGGACCGGTGTTCGGTGCAACTCAAATGGCAATGTTGAGAAGCTCGACCTGGCGGGGATGAATCTCACAGGCAAAATCTCAGATTCGATCAGCCAGCTGAGTAGCCTTGTCTCGTTTAACATATCATGCAACGGATTCGAGTCGCTGCTCCCGAAATCAATCCCTCCGTTGAAATCTATTGACATCAGCCAGAATTCATTCTCAGGGAGTCTTTTTCTATTTAGCAATGAATCACTTGGGCTTGTTCACCTCAATGCTTCAGGGAACAATCTCTCCGGAAATCTCACGGAGGATCTCGGGAACTTAGTCTCTTTAGAAGTTCTTGATCTCCGAGGGAATTTCTTTCAAGGGTCACTTCCAAGTTCATTCAAGAATCTACAGAAGCTGAGATTTCTCGGATTATCCGGAAACAATCTCACCGGCGAGTTACCAAGCGTTCTCGGCCAGCTCCCTTCACTTGAAACCGCCATTCTTGGTTACAACGAATTCAAAGGTCCGATTCCACCGGAATTTGGAAACATAAACAGCCTCAAGTACCTTGATTTGGCCATCGGAAAGCTCAGTGGTGAGATTCCGTCAGAGCTTGGGAAGCTCAAGTCACTCGAGACGCTTCTCCTGTACGAGAATAACTTCACCGGAACAATTCCAAGAGAGATAGGAAGCATTACCACGCTAAAGGTTCTTGATTTCTCCGATAATGCGTTAACCGGCGAGATTCCAATGGAGATAACAAAGCTCAAGAACCTCCAGCTACTGAACCTGATGCGCAACAAACTCTCAGGCTCCATTCCTCCCGCCATCAGCAGTCTAGCACAGTTACAAGTCCTCGAGCTCTGGAACAACACGCTCTCCGGCGAGTTACCAAGCGATCTCGGGAAGAATTCTCCATTACAATGGCTTGACGTTTCTTCAAACTCCTTCTCAGGCGAGATTCCTTCAACTCTATGCAACAAGGGAAATCTAACCAAGCTCATTCTCTTCAACAACACCTTCACCGGTCAGATTCCAGCGACTCTTTCCACTTGCCAATCACTAGTTCGTGTTAGAATGCAGAACAATCTACTAAACGGATCAATTCCTATCGGCTTTGGCAAGCTTGAGAAGCTACAGAGACTCGAACTAGCCGGAAATCGTCTCAGCGGAGGGATCCCTGGAGACATCTCCGATTCAGTTTCACTTTCTTTCATTGATTTCTCAAGAAACCAGATCCGATCATCTCTCCCTTCCACAATCCTCTCAATTCACAACCTACAGGCGTTTTTAGTCGCCGATAACTTTATCTCCGGCGAAGTTCCAGACCAATTCCAGGATTGTCCTTCACTCTCTAATCTCGATCTCTCATCAAACACTCTCACTGGCACTATCCCTTCAAGCATTGCTTCATGCGAGAAGCTCGTAAGCCTCAACCTAAGAAATAATAACCTCACCGGCGAAATCCCTAGACAGATCACGACAATGTCTGCATTAGCAGTGCTAGATCTCTCCAACAATTCCTTAACCGGAGTACTACCAGAGAGCATCGGAACATCTCCAGCTCTGGAACTCCTAAACGTCTCATACAACAAGCTCACAGGTCCAGTCCCTATCAACGGCTTTCTCAAAACCATAAATCCAGATGATCTAAGAGGAAACTCCGGTCTCTGCGGCGGCGTTCTACCACCGTGTAGTAAATTCCAAAGAGCAACATCGAGTCACAGTAGCCTCCACGGGAAACGAATTGTCGCCGGATGGTTGATTGGGATAGCATCGGTTCTAGCTCTAGGGATTCTCACCATTGTTACGAGAACTCTGTACAAGAAATGGTATTCTAACGGATTCTGCGGCGACGAGACGGCGAGCAAAGGTGAATGGCCTTGGAGATTAATGGCGTTTCATAGATTAGGGTTTACAGCTTCCGATATCTTGGCATGTATCAAAGAATCAAACATGATCGGAATGGGAGCAACCGGAATCGTGTACAAAGCAGAAATGTCACGATCAAGCACAGTTCTCGCCGTGAAGAAGCTCTGGAGATCTGCCGCGGATATTGAAGATGGAACCACCGGAGATTTCGTAGGCGAAGTTAACCTCCTCGGGAAATTGAGACACAGAAACATAGTGAGGCTCCTAGGGTTCTTATACAACGACAAAAACATGATGATCGTATATGAATTCATGCTCAACGGAAACCTTGGTGATGCGATTCACGGCAAAAACGCCGCCGGGAGACTTCTCGTTGATTGGGTTTCGCGTTACAACATCGCGTTAGGTGTAGCTCACGGCCTCGCTTACCTCCACCATGATTGTCATCCTCCGGTGATTCACAGAGACATCAAATCCAACAATATCTTGCTCGACGCGAATCTCGACGCCAGAATCGCCGATTTTGGCCTCGCCAGGATGATGGCGAGGAAGAAAGAAACCGTTTCAATGGTCGCCGGTTCTTACGGTTACATTGCTCCCGAGTATGGATACACTTTGAAGGTGGATGAGAAGATAGACATATACAGCTACGGCGTCGTACTATTGGAGCTGTTAACCGGAAGAAGACCATTGGAACCGGAGTTTGGAGAATCAGTAGACATTGTGGAGTGGGTGAGAAGGAAGATAAGAGACAACATATCACTAGAAGAAGCATTAGATCCTAACGTAGGAAACTGCAGATATGTGCAAGAAGAGATGCTTTTAGTTCTACAGATTGCTCTTCTCTGCACTACAAAGCTCCCGAAAGACAGACCTTCGATGAGAGATGTGATATCGATGCTCGGAGAGGCTAAACCGAGGAGGAAAAGTAATAGTAATGAAGAGAACACTAGTCGTAGCTTGGCCGAGAAACATTCATCGGTTTTTAGTACTTCACCTGTAAATGGCCTTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009987 GO:0010065 GO:0010067 GO:0010087 GO:0010154 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0042995 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0048316 GO:0048507 GO:0048508 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090406 GO:0120025 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase TENA_THI-4

Protein Analysis

1013

Amino Acids

110.48

Weight (kDa)

6.57

Isoelectric Point (pI)

29.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	29 - 68	6.1e-10	Leucine rich repeat N-terminal domain
LRR_14	PF23598	154 - 216	1e-06	Leucine-rich repeat region
LRR_8	PF13855	165 - 222	7.2e-06	Leucine rich repeat
LRR_14	PF23598	232 - 317	2e-09	Leucine-rich repeat region
LRR_8	PF13855	477 - 536	4.3e-08	Leucine rich repeat
LRR_8	PF13855	525 - 584	2.9e-09	Leucine rich repeat
Pkinase	PF00069	701 - 973	4.7e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	701 - 976	2e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015880)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28650
fragaria_vesca	FvH4_2g20490
malus_domestica	MD05G1188700.v1.1 MD10G1176300.v1.1
prunus_persica	Prupe.8G215300_v2.0.a1
pyrus_communis	pycom10g15220
rosa_chinensis	RchiOBHm_Chr6g0286591
rosa_laevigata	RLG00000012556
rosa_multiflora	Rmu_sc0000560.1_g000003
rosa_roxburghii	Rroxscaffold_7G00182160
rosa_rugosa	Rorug06G0181300
rosa_samantha	Rh6AG294200 Rh6BG297300 Rh6CG297700 Rh6DG289600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	950
AccI	GTMKAC	1 cut(s)	2742
AccII	CGCG	4 cut(s)	2204, 2413, 2426, 2522
AccIII	TCCGGA	2 cut(s)	458, 587
AclWI	GGATC	8 cut(s)	122, 135, 483, 1261, 1324, 1337, 1384, 2798
AcoI	YGGCCR	3 cut(s)	625, 729, 2988
AcsI	RAATTY	7 cut(s)	376, 520, 668, 692, 1063, 1853, 2333
AcuI	CTGAAG	1 cut(s)	426
AcyI	GRCGYC	2 cut(s)	2532, 2679
AfaI	GTAC	7 cut(s)	719, 803, 1689, 1976, 2141, 2685, 3016
AfiI	CCNNNNNNNGG	9 cut(s)	195, 695, 727, 1489, 1772, 2630, 2729, 2813, 3029
AgeI	ACCGGT	2 cut(s)	188, 1178
AhlI	ACTAGT	2 cut(s)	1216, 2975
AjnI	CCWGG	4 cut(s)	231, 1333, 1488, 2558
AjuI	GAANNNNNNNTTGG	4 cut(s)	1203, 1235, 2712, 2744
AloI	GAACNNNNNNTCC	2 cut(s)	440, 472
Alw21I	GWGCWC	2 cut(s)	93, 1017
AlwI	GGATC	8 cut(s)	122, 135, 483, 1261, 1324, 1337, 1384, 2798
AlwNI	CAGNNNCTG	2 cut(s)	568, 937
Ama87I	CYCGRG	6 cut(s)	479, 785, 1010, 1055, 2255, 2624
Aor13HI	TCCGGA	2 cut(s)	458, 587
AoxI	GGCC	7 cut(s)	625, 729, 2033, 2443, 2551, 2988, 3031
ApeKI	GCWGC	1 cut(s)	328
ApoI	RAATTY	7 cut(s)	376, 520, 668, 692, 1063, 1853, 2333
AseI	ATTAAT	1 cut(s)	2045
AsiGI	ACCGGT	2 cut(s)	188, 1178
Asp700I	GAANNNNTTC	2 cut(s)	380, 812
AspA2I	CCTAGG	1 cut(s)	2290
AspLEI	GCGC	1 cut(s)	951
AspS9I	GGNCC	3 cut(s)	186, 677, 1757
AsuC2I	CCSGG	1 cut(s)	2386
AvaI	CYCGRG	6 cut(s)	479, 785, 1010, 1055, 2255, 2624
AvaII	GGWCC	3 cut(s)	186, 677, 1757
AvrII	CCTAGG	1 cut(s)	2290
BalI	TGGCCA	1 cut(s)	731
BamHI	GGATCC	2 cut(s)	127, 1329
BanII	GRGCYC	2 cut(s)	93, 1017
BarI	GAAGNNNNNNTAC	1 cut(s)	3018
BbsI	GAAGAC	1 cut(s)	2716
Bbv12I	GWGCWC	2 cut(s)	93, 1017
BbvI	GCAGC	1 cut(s)	315
BccI	CCATC	6 cut(s)	80, 740, 989, 1905, 2210, 2560
BceAI	ACGGC	6 cut(s)	1789, 2031, 2162, 2386, 2458, 2692
BcgI	CGANNNNNNTGC	4 cut(s)	301, 335, 2155, 2189
BciT130I	CCWGG	4 cut(s)	233, 1335, 1490, 2560
BciVI	GTATCC	1 cut(s)	2627
BcnI	CCSGG	1 cut(s)	2386
BcuI	ACTAGT	2 cut(s)	1216, 2975
BfmI	CTRYAG	5 cut(s)	560, 1289, 1433, 2821, 2855
BfuI	GTATCC	1 cut(s)	2627
BglII	AGATCT	2 cut(s)	1660, 2195
BisI	GCNGC	6 cut(s)	329, 1828, 1831, 2005, 2202, 2382
BlnI	CCTAGG	1 cut(s)	2290
BlsI	GCNGC	6 cut(s)	330, 1829, 1832, 2006, 2203, 2383
BmcAI	AGTACT	2 cut(s)	1689, 3016
Bme1390I	CCNGG	5 cut(s)	233, 1335, 1490, 2386, 2560
Bme18I	GGWCC	3 cut(s)	186, 677, 1757
BmeT110I	CYCGRG	6 cut(s)	479, 785, 1010, 1055, 2255, 2624
BmgT120I	GGNCC	3 cut(s)	186, 677, 1757
BmiI	GGNNCC	6 cut(s)	129, 967, 1331, 2221, 2288, 2721
BmrFI	CCNGG	5 cut(s)	233, 1335, 1490, 2386, 2560
BmsI	GCATC	6 cut(s)	936, 1710, 1937, 2350, 2832, 2913
BpiI	GAAGAC	1 cut(s)	2716
BpmI	CTGGAG	4 cut(s)	914, 1356, 1698, 2212
BpuEI	CTTGAG	5 cut(s)	698, 761, 905, 1301, 1363
BpuMI	CCSGG	1 cut(s)	2386
Bsa29I	ATCGAT	1 cut(s)	2921
BsaBI	GATNNNNATC	1 cut(s)	2469
BsaHI	GRCGYC	2 cut(s)	2532, 2679
BsaI	GGTCTC	1 cut(s)	1826
BsaJI	CCNNGG	9 cut(s)	514, 1333, 1888, 2036, 2202, 2254, 2290, 2353, 2942
Bsc4I	CCNNNNNNNGG	9 cut(s)	195, 695, 727, 1489, 1772, 2630, 2729, 2813, 3029
Bse118I	RCCGGY	6 cut(s)	188, 602, 890, 1178, 1610, 2600
Bse1I	ACTGG	3 cut(s)	155, 1543, 1760
Bse3DI	GCAATG	4 cut(s)	220, 415, 1557, 2616
Bse8I	GATNNNNATC	1 cut(s)	2469
BseAI	TCCGGA	2 cut(s)	458, 587
BseBI	CCWGG	4 cut(s)	233, 1335, 1490, 2560
BseCI	ATCGAT	1 cut(s)	2921
BseDI	CCNNGG	9 cut(s)	514, 1333, 1888, 2036, 2202, 2254, 2290, 2353, 2942
BseGI	GGATG	5 cut(s)	246, 1916, 2470, 2568, 2656
BseJI	GATNNNNATC	1 cut(s)	2469
BseLI	CCNNNNNNNGG	9 cut(s)	195, 695, 727, 1489, 1772, 2630, 2729, 2813, 3029
BseMI	GCAATG	4 cut(s)	220, 415, 1557, 2616
BseMII	CTCAG	8 cut(s)	272, 276, 399, 560, 757, 975, 1119, 1333
BseNI	ACTGG	3 cut(s)	155, 1543, 1760
BseRI	GAGGAG	2 cut(s)	2243, 2959
BseXI	GCAGC	1 cut(s)	315
BsgI	GTGCAG	1 cut(s)	2857
Bsh1236I	CGCG	4 cut(s)	2204, 2413, 2426, 2522
BshFI	GGCC	7 cut(s)	627, 731, 2035, 2445, 2553, 2990, 3033
BshTI	ACCGGT	2 cut(s)	188, 1178
BshVI	ATCGAT	1 cut(s)	2921
BsiHKAI	GWGCWC	2 cut(s)	93, 1017
BsiHKCI	CYCGRG	6 cut(s)	479, 785, 1010, 1055, 2255, 2624
BslFI	GGGAC	1 cut(s)	1748
BslI	CCNNNNNNNGG	9 cut(s)	195, 695, 727, 1489, 1772, 2630, 2729, 2813, 3029
BsmBI	CGTCTC	4 cut(s)	782, 1322, 1741, 2006
BsmFI	GGGAC	1 cut(s)	1748
BsmI	GAATGC	1 cut(s)	1236
BsnI	GGCC	7 cut(s)	627, 731, 2035, 2445, 2553, 2990, 3033
Bso31I	GGTCTC	1 cut(s)	1826
BsoBI	CYCGRG	6 cut(s)	479, 785, 1010, 1055, 2255, 2624
Bsp1286I	GDGCHC	2 cut(s)	93, 1017
Bsp13I	TCCGGA	2 cut(s)	458, 587
Bsp1407I	TGTACA	2 cut(s)	1974, 2139
BspANI	GGCC	7 cut(s)	627, 731, 2035, 2445, 2553, 2990, 3033
BspCNI	CTCAG	8 cut(s)	273, 275, 398, 561, 756, 974, 1118, 1332
BspDI	ATCGAT	1 cut(s)	2921
BspEI	TCCGGA	2 cut(s)	458, 587
BspFNI	CGCG	4 cut(s)	2204, 2413, 2426, 2522
BspLI	GGNNCC	6 cut(s)	129, 967, 1331, 2221, 2288, 2721
BspMAI	CTGCAG	1 cut(s)	2825
BspPI	GGATC	8 cut(s)	122, 135, 483, 1261, 1324, 1337, 1384, 2798
BspQI	GCTCTTC	1 cut(s)	2871
BspTNI	GGTCTC	1 cut(s)	1826
BsrDI	GCAATG	4 cut(s)	220, 415, 1557, 2616
BsrFI	RCCGGY	6 cut(s)	188, 602, 890, 1178, 1610, 2600
BsrGI	TGTACA	2 cut(s)	1974, 2139
BsrI	ACTGG	3 cut(s)	155, 1543, 1760
BssAI	RCCGGY	6 cut(s)	188, 602, 890, 1178, 1610, 2600
BssECI	CCNNGG	9 cut(s)	514, 1333, 1888, 2036, 2202, 2254, 2290, 2353, 2942
BssNI	GRCGYC	2 cut(s)	2532, 2679
BssT1I	CCWWGG	3 cut(s)	2036, 2290, 2353
Bst2UI	CCWGG	4 cut(s)	233, 1335, 1490, 2560
Bst4CI	ACNGT	8 cut(s)	38, 179, 999, 1845, 1880, 2170, 2587, 2612
Bst6I	CTCTTC	5 cut(s)	29, 1166, 2832, 2871, 2961
BstACI	GRCGYC	2 cut(s)	2532, 2679
BstAUI	TGTACA	2 cut(s)	1974, 2139
BstC8I	GCNNGC	4 cut(s)	278, 629, 1277, 2020
BstDSI	CCRYGG	2 cut(s)	1888, 2202
BstENI	CCTNNNNNAGG	1 cut(s)	2811
BstF5I	GGATG	5 cut(s)	246, 1916, 2470, 2568, 2656
BstFNI	CGCG	4 cut(s)	2204, 2413, 2426, 2522
BstHHI	GCGC	1 cut(s)	951
BstMWI	GCNNNNNNNGC	4 cut(s)	624, 772, 1285, 2540
BstNI	CCWGG	4 cut(s)	233, 1335, 1490, 2560
BstNSI	RCATGY	1 cut(s)	2094
BstSCI	CCNGG	5 cut(s)	231, 1333, 1488, 2384, 2558
BstSFI	CTRYAG	5 cut(s)	560, 1289, 1433, 2821, 2855
BstUI	CGCG	4 cut(s)	2204, 2413, 2426, 2522
BstV1I	GCAGC	1 cut(s)	315
BstV2I	GAAGAC	1 cut(s)	2716
BstX2I	RGATCY	7 cut(s)	127, 475, 1329, 1389, 1660, 2195, 2803
BstXI	CCANNNNNNTGG	2 cut(s)	1077, 2566
BstYI	RGATCY	7 cut(s)	127, 475, 1329, 1389, 1660, 2195, 2803
Bsu15I	ATCGAT	1 cut(s)	2921
BsuI	GTATCC	1 cut(s)	2627
BsuRI	GGCC	7 cut(s)	627, 731, 2035, 2445, 2553, 2990, 3033
BsuTUI	ATCGAT	1 cut(s)	2921
BtgI	CCRYGG	2 cut(s)	1888, 2202
BtgZI	GCGATG	1 cut(s)	2407
BtsCI	GGATG	5 cut(s)	246, 1916, 2470, 2568, 2656
BtsI	GCAGTG	1 cut(s)	1659
BtsIMutI	CAGTG	4 cut(s)	175, 751, 1536, 1659
Cac8I	GCNNGC	4 cut(s)	278, 629, 1277, 2020
CaiI	CAGNNNCTG	2 cut(s)	568, 937
CfoI	GCGC	1 cut(s)	951
Cfr10I	RCCGGY	6 cut(s)	188, 602, 890, 1178, 1610, 2600
Cfr13I	GGNCC	3 cut(s)	186, 677, 1757
Cfr42I	CCGCGG	1 cut(s)	2205
ClaI	ATCGAT	1 cut(s)	2921
CseI	GACGC	4 cut(s)	799, 2528, 2540, 2668
Csp6I	GTAC	7 cut(s)	718, 802, 1688, 1975, 2140, 2684, 3015
CspAI	ACCGGT	2 cut(s)	188, 1178
CspCI	CAANNNNNGTGG	4 cut(s)	105, 140, 2447, 2482
CviAII	CATG	7 cut(s)	309, 1566, 2091, 2110, 2317, 2338, 2462
CviQI	GTAC	7 cut(s)	718, 802, 1688, 1975, 2140, 2684, 3015
EaeI	YGGCCR	3 cut(s)	625, 729, 2988
Eam1104I	CTCTTC	5 cut(s)	29, 1166, 2832, 2871, 2961
EarI	CTCTTC	5 cut(s)	29, 1166, 2832, 2871, 2961
Ecl136II	GAGCTC	2 cut(s)	91, 1015
Eco130I	CCWWGG	3 cut(s)	2036, 2290, 2353
Eco24I	GRGCYC	2 cut(s)	93, 1017
Eco31I	GGTCTC	1 cut(s)	1826
Eco32I	GATATC	2 cut(s)	2083, 2919
Eco47I	GGWCC	3 cut(s)	186, 677, 1757
Eco53kI	GAGCTC	2 cut(s)	91, 1015
Eco57I	CTGAAG	1 cut(s)	426
Eco88I	CYCGRG	6 cut(s)	479, 785, 1010, 1055, 2255, 2624
EcoICRI	GAGCTC	2 cut(s)	91, 1015
EcoNI	CCTNNNNNAGG	1 cut(s)	2811
EcoRI	GAATTC	4 cut(s)	376, 668, 1063, 2333
EcoRII	CCWGG	4 cut(s)	231, 1333, 1488, 2558
EcoRV	GATATC	2 cut(s)	2083, 2919
EcoT14I	CCWWGG	3 cut(s)	2036, 2290, 2353
EcoT38I	GRGCYC	2 cut(s)	93, 1017
ErhI	CCWWGG	3 cut(s)	2036, 2290, 2353
Esp3I	CGTCTC	4 cut(s)	782, 1322, 1741, 2006
FaeI	CATG	7 cut(s)	312, 1569, 2094, 2113, 2320, 2341, 2465
FalI	AAGNNNNNCTT	6 cut(s)	522, 554, 1546, 1578, 2829, 2861
FaqI	GGGAC	1 cut(s)	1748
FatI	CATG	7 cut(s)	308, 1565, 2090, 2109, 2316, 2337, 2461
FauI	CCCGC	2 cut(s)	229, 985
FblI	GTMKAC	1 cut(s)	2742
Fnu4HI	GCNGC	6 cut(s)	329, 1828, 1831, 2005, 2202, 2382
FokI	GGATG	5 cut(s)	253, 1923, 2457, 2575, 2663
FriOI	GRGCYC	2 cut(s)	93, 1017
Fsp4HI	GCNGC	6 cut(s)	329, 1828, 1831, 2005, 2202, 2382
FspI	TGCGCA	1 cut(s)	950
GlaI	GCGC	1 cut(s)	950
GluI	GCNGC	6 cut(s)	329, 1828, 1831, 2005, 2202, 2382
GsuI	CTGGAG	4 cut(s)	914, 1356, 1698, 2212
HaeIII	GGCC	7 cut(s)	627, 731, 2035, 2445, 2553, 2990, 3033
HgaI	GACGC	4 cut(s)	799, 2528, 2540, 2668
HhaI	GCGC	1 cut(s)	951
Hin1I	GRCGYC	2 cut(s)	2532, 2679
Hin1II	CATG	7 cut(s)	312, 1569, 2094, 2113, 2320, 2341, 2465
Hin6I	GCGC	1 cut(s)	949
HinP1I	GCGC	1 cut(s)	949
HincII	GTYRAC	4 cut(s)	85, 888, 2248, 2700
HindII	GTYRAC	4 cut(s)	85, 888, 2248, 2700
HindIII	AAGCTT	2 cut(s)	155, 1277
HpaI	GTTAAC	3 cut(s)	888, 2248, 2700
Hpy166II	GTNNAC	8 cut(s)	85, 430, 888, 2070, 2140, 2248, 2700, 2743
Hpy8I	GTNNAC	8 cut(s)	85, 430, 888, 2070, 2140, 2248, 2700, 2743
Hpy99I	CGWCG	4 cut(s)	2012, 2522, 2534, 2684
HpyCH4III	ACNGT	8 cut(s)	38, 179, 999, 1845, 1880, 2170, 2587, 2612
HpyCH4IV	ACGT	3 cut(s)	1086, 1734, 2811
HpyCH4V	TGCA	8 cut(s)	201, 312, 1131, 1234, 1646, 2823, 2833, 2874
HpyF10VI	GCNNNNNNNGC	4 cut(s)	624, 772, 1285, 2540
HpySE526I	ACGT	3 cut(s)	1086, 1734, 2811
Hsp92I	GRCGYC	2 cut(s)	2532, 2679
Hsp92II	CATG	7 cut(s)	312, 1569, 2094, 2113, 2320, 2341, 2465
HspAI	GCGC	1 cut(s)	949
Kpn2I	TCCGGA	2 cut(s)	458, 587
KspAI	GTTAAC	3 cut(s)	888, 2248, 2700
KspI	CCGCGG	1 cut(s)	2205
LguI	GCTCTTC	1 cut(s)	2871
LmnI	GCTCC	8 cut(s)	336, 636, 971, 2123, 2292, 2626, 2692, 2889
Lsp1109I	GCAGC	1 cut(s)	315
LweI	GCATC	6 cut(s)	936, 1710, 1937, 2350, 2832, 2913
MaeII	ACGT	3 cut(s)	1086, 1734, 2811
MflI	RGATCY	7 cut(s)	127, 475, 1329, 1389, 1660, 2195, 2803
MhlI	GDGCHC	2 cut(s)	93, 1017
MlsI	TGGCCA	1 cut(s)	731
MluNI	TGGCCA	1 cut(s)	731
MlyI	GAGTC	5 cut(s)	332, 400, 1189, 1290, 1882
MmeI	TCCRAC	2 cut(s)	1692, 2526
Mox20I	TGGCCA	1 cut(s)	731
MroI	TCCGGA	2 cut(s)	458, 587
MroXI	GAANNNNTTC	2 cut(s)	380, 812
MscI	TGGCCA	1 cut(s)	731
MseI	TTAA	6 cut(s)	300, 887, 1679, 2045, 2247, 2699
MslI	CAYNNNNRTG	3 cut(s)	435, 1075, 1637
Msp20I	TGGCCA	1 cut(s)	731
MspA1I	CMGCKG	3 cut(s)	280, 1323, 2204
MspR9I	CCNGG	5 cut(s)	233, 1335, 1490, 2386, 2560
Mva1269I	GAATGC	1 cut(s)	1236
MvaI	CCWGG	4 cut(s)	233, 1335, 1490, 2560
MvnI	CGCG	4 cut(s)	2204, 2413, 2426, 2522
MwoI	GCNNNNNNNGC	4 cut(s)	624, 772, 1285, 2540
NciI	CCSGG	1 cut(s)	2386
NlaIII	CATG	7 cut(s)	312, 1569, 2094, 2113, 2320, 2341, 2465
NlaIV	GGNNCC	6 cut(s)	129, 967, 1331, 2221, 2288, 2721
NmeAIII	GCCGAG	2 cut(s)	603, 3016
NmuCI	GTSAC	4 cut(s)	534, 780, 1874, 2154
NsbI	TGCGCA	1 cut(s)	950
NspI	RCATGY	1 cut(s)	2094
PaeR7I	CTCGAG	2 cut(s)	785, 1010
PciSI	GCTCTTC	1 cut(s)	2871
PcsI	WCGNNNNNNNCGW	2 cut(s)	332, 2526
PctI	GAATGC	1 cut(s)	1236
PdmI	GAANNNNTTC	2 cut(s)	380, 812
PflFI	GACNNNGTC	2 cut(s)	80, 1639
PfoI	TCCNGGA	1 cut(s)	1488
PinAI	ACCGGT	2 cut(s)	188, 1178
PkrI	GCNGC	6 cut(s)	330, 1829, 1832, 2006, 2203, 2383
PleI	GAGTC	5 cut(s)	331, 399, 1189, 1290, 1881
PpsI	GAGTC	5 cut(s)	331, 399, 1189, 1290, 1881
PshBI	ATTAAT	1 cut(s)	2045
Psp124BI	GAGCTC	2 cut(s)	93, 1017
Psp6I	CCWGG	4 cut(s)	231, 1333, 1488, 2558
PspGI	CCWGG	4 cut(s)	231, 1333, 1488, 2558
PspN4I	GGNNCC	6 cut(s)	129, 967, 1331, 2221, 2288, 2721
PspPI	GGNCC	3 cut(s)	186, 677, 1757
PspXI	VCTCGAGB	1 cut(s)	1010
PstI	CTGCAG	1 cut(s)	2825
PstNI	CAGNNNCTG	2 cut(s)	568, 937
PsuI	RGATCY	7 cut(s)	127, 475, 1329, 1389, 1660, 2195, 2803
PsyI	GACNNNGTC	2 cut(s)	80, 1639
PvuII	CAGCTG	1 cut(s)	280
RsaI	GTAC	7 cut(s)	719, 803, 1689, 1976, 2141, 2685, 3016
RsaNI	GTAC	7 cut(s)	718, 802, 1688, 1975, 2140, 2684, 3015
RseI	CAYNNNNRTG	3 cut(s)	435, 1075, 1637
SacI	GAGCTC	2 cut(s)	93, 1017
SacII	CCGCGG	1 cut(s)	2205
SapI	GCTCTTC	1 cut(s)	2871
SaqAI	TTAA	6 cut(s)	300, 887, 1679, 2045, 2247, 2699
SatI	GCNGC	6 cut(s)	329, 1828, 1831, 2005, 2202, 2382
Sau96I	GGNCC	3 cut(s)	186, 677, 1757
ScaI	AGTACT	2 cut(s)	1689, 3016
SchI	GAGTC	5 cut(s)	332, 400, 1189, 1290, 1882
ScrFI	CCNGG	5 cut(s)	233, 1335, 1490, 2386, 2560
SduI	GDGCHC	2 cut(s)	93, 1017
SfaNI	GCATC	6 cut(s)	936, 1710, 1937, 2350, 2832, 2913
SfcI	CTRYAG	5 cut(s)	560, 1289, 1433, 2821, 2855
Sfr274I	CTCGAG	2 cut(s)	785, 1010
Sfr303I	CCGCGG	1 cut(s)	2205
SgrAI	CRCCGGYG	2 cut(s)	602, 1610
SgrBI	CCGCGG	1 cut(s)	2205
SinI	GGWCC	3 cut(s)	186, 677, 1757
SlaI	CTCGAG	2 cut(s)	785, 1010
SmiMI	CAYNNNNRTG	3 cut(s)	435, 1075, 1637
SmlI	CTYRAG	7 cut(s)	713, 776, 785, 920, 1010, 1280, 1378
SmoI	CTYRAG	7 cut(s)	713, 776, 785, 920, 1010, 1280, 1378
SpeI	ACTAGT	2 cut(s)	1216, 2975
SstI	GAGCTC	2 cut(s)	93, 1017
StyD4I	CCNGG	5 cut(s)	231, 1333, 1488, 2384, 2558
StyI	CCWWGG	3 cut(s)	2036, 2290, 2353
TaaI	ACNGT	8 cut(s)	38, 179, 999, 1845, 1880, 2170, 2587, 2612
TaiI	ACGT	3 cut(s)	1089, 1737, 2814
TatI	WGTACW	4 cut(s)	1687, 1974, 2139, 3014
TauI	GCSGC	5 cut(s)	1830, 1833, 2007, 2204, 2384
Tru1I	TTAA	6 cut(s)	300, 887, 1679, 2045, 2247, 2699
Tru9I	TTAA	6 cut(s)	300, 887, 1679, 2045, 2247, 2699
TscAI	CASTG	4 cut(s)	182, 751, 1543, 1659
TseFI	GTSAC	4 cut(s)	534, 780, 1874, 2154
TseI	GCWGC	1 cut(s)	328
Tsp45I	GTSAC	4 cut(s)	534, 780, 1874, 2154
TspGWI	ACGGA	7 cut(s)	330, 339, 485, 747, 1266, 2010, 2361
TspRI	CASTG	4 cut(s)	182, 751, 1543, 1659
Tth111I	GACNNNGTC	2 cut(s)	80, 1639
VpaK11BI	GGWCC	3 cut(s)	186, 677, 1757
VspI	ATTAAT	1 cut(s)	2045
XagI	CCTNNNNNAGG	1 cut(s)	2811
XapI	RAATTY	7 cut(s)	376, 520, 668, 692, 1063, 1853, 2333
XceI	RCATGY	1 cut(s)	2094
XhoI	CTCGAG	2 cut(s)	785, 1010
XmaJI	CCTAGG	1 cut(s)	2290
XmiI	GTMKAC	1 cut(s)	2742
XmnI	GAANNNNTTC	2 cut(s)	380, 812
ZrmI	AGTACT	2 cut(s)	1689, 3016

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.