Rorug06G0181300
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
28635494 .. 28639629
4136 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0181300.1

Sequence Viewer

Length: 3210 bp
ATGGGCGGCGACGAGAAAGCTAAAACAGTGGTTGAAGAAGAGCCCAAAATCCCAGTGTTCACAGTCCTTAAGAACGGAGCGATTCTCAAGAACATCTTCATCGTCAACAAACCCCCACCACCGCCACACTCGGAACCAATCTCGTCCGTCCATCAAGAAACCGAAGAAATCTTGATCGTCGGACGGCACCCCGACTGCAACATCGTGTTGACTCACCCCAGCGTCAGCAGATTCCACCTCCAAATCCTCTCTAATCCCTCCTCCCACAGGCTTTCCCTCACCGATTTATCATCAGTCCATGGGACTTGGATCTCGGAGAAGAGGATTGAGCCAGGGGTTCGAGTAGAGCTGAGGCAAGGGGACACGCTCAGGGTTGGTGCTTCTAGCAGGCTCTACAGGCTTCACTGGATTCCTTTGAGCCACGCCTATGAACAAGACGCACTCAGGGTTCTGAATTGTTTGCCAGTTGAAAACGCAGAACCTGATTGTTCTGATATGAATTTTGAGGGTATGGAGTCTTTATTCTCTGATGAAAATATGGGATTAATTCAACCTCCGGTGCCTCGAGGAGGAGATCAAAGTGAACAAGGTGTTGGCAACTCATCAGAAGATGATTGTGAAGAGAAAAAGATGTGTGACATTCCAGAAATAGACCAGGTTGTGAATATTTTGCCAATTGAAAAAGCAGAATTTGAATCTACTGAATCTCTAGTCTGTGGTGATAATTTGGGATTTATTGGGCGGAAGGAGATCCCATCAGCACCTCCAATGCCTGAAGAAGAAGACCGAAGTGAACATGGTGGTGAGAACTCGTCAAAAGTTGTTGGCCAAGAGAATGTGTTGTCAAGCTTCTGGGCCTTTGGAACTGAATCGGTGAACCTGTTTTTTCCTCTTGAAGACTCTACTTCTAATTCAAAGGAAAACCAGTACGTGCAACTAAATTGTGTCACAGGAGGTTCTGAATTGGAAAAAGACCAGGGACAGAGTGATATCTCTGGTCTTTCAGCTGGACCTTTTGTGATAGAGAATTCATCCTTGCTGATCCGAGAAGTCCTTGCGGAGACGAAACATCAACAAGTTGAAGAAGTAAATCTGACCCCAGAAGCAAAATCAGACTCGCTGGTTAATCTGGATGGCAAAAGCTCTATAACGAAAGACCATGGACAGGCTGATCAATTGTGTCTATCTTCTGAACCTCTTGAATATTCCGATGACAAGGAAGAGGGTGCCTATCCTGCTGCGCAAATACCTGGGACAAATGCTGACCAAAGCTCTTTGAGCAAAGACCATGGACAGAATGATAATGTCTTGTGTCTTTCAGCTGGACCTTTTGTGACGGAGAACTCATCCTTGCTGGTTGGGGAAGTCCTTGGGGAGATCAACAATCAACAAGGTGAAGAAGAAAACCCATCACAAAAACCTACCTTGCTGGTTAACCTGGATTTTGAGATTTCTAATGAAATCAGATGTCTTGTTGATGAAAGACGTGGAGAAACTGAAAAGAGAAGTGTGTCACCCAAAAACCACCATGAAAAGAGGGATACCAAAACCATCTCCTCTGTGCCTCTTGTCACAGATTTTGTAGACTCATTTTCACCAGACAGGGATCTCTCAGAGAAAATAGATGACAAAGAGAACCAGACTCCACTATCTATCTGCACTGCAGGAGGACAGCCTGAATCAGAATTCTGTAATAGCCCTCCCCTGAGATCCGAAGATAAGTCAATCTTTGGAGAAAGCATTTGGGAAAGAAGAGGTAAACCTGCTAGTGCTGTTACGATTCAAACAGAGAGAAGCAGAGAAAGAACTACTGTGGAGGCAGGAATTGATAACGATAATGAACAGGCAGGAATTGATAATGATAATGAACAGAAGGTGGAAAGCTTTACTCCAGACAAGGAGAATCTAACACCAAATACTCTTCGTCTGAGGTCCTTGAAAAAGAAGTTTGAGGTAGAAATTAAGCTGGATGATACTCAAGAGGAGCAGGAAATCTTTACTCCTGACAAGGAAAACTTCACACCAAATACTCTTCGACTGAGGTCCTTGAAGAAGAAGGGTAAGCTAGAATTAACCGATTCCAAATCCCACAGATCATCCTTGTCGAAGCAAAACTTCAATTCCAATATCCCTAGAGAAGATCTGCTTGTATCTCCAGGGAAAGAGAACCAGAAATTGAAGGATATCCAAGAAAGCAAATCAGTAGAAACTACTACTGGGAATCAAGCAAGGCTGGAAAAAAAGTTGATGCTCACAAGCAGCACGAAAAGGATGCCATTCCAATCACTACTTAAAAGTTCTGCAGGCAAGAACAGCACATCAGAAGCTTCAGTGCCCGATGTAGCTACTAAAAGCAGCACATCAGAAGCTTCAGTCCCCGATGTAGCTACTAAAAACAGCACATTTCTTGCTTGTAGTCGAACGAAGGAGAAGGTCAAGAATACACTCTCTAATAAATTTGCTGGAGAAGGAAAGAGGGGCTGGACTATGGTTGCAGACACTAATACTCTCCTTCACAAGGAATCAAGGAAGTCATTGCAACTTCTACAAGGTCTTAAGGGGACTCATTTGATCATTCCAAGAATGGTTATACGGGAACTGGATTGCTTGAAACAGTGTGGCAGCCTGTTCAGAAAGAAAACAGAGGCTTGTTTGGTTCTGGAATGGATTGAAGAGTGTATGGTAAAAACAAATTGGTGGATCCATGTCCAGAGTTCACTGGAAGATGGAAGACTGATCGCTCCAACCCCTCCTGCTTCTCCACTGTCTCTATTTAGTGAGGACAGTTGGGGACTTACTTCTGGAACAACAAGCTCGTTTCCCTTCTTAAGATGTAAGAGTTCTATGGAACTTGTATCGCCAGCAGCAGAAGATCATATACTTGATTGTGCTCTTTTACATAGGAAGATGAGCAATGAGGGACAACTTGTTCTTCTAAGTAGTGACATCACCCTGAAGATCAAAGCCATGGCAGAGGGTTTGATTTGTGAGACAGCTCAAGAATTCCATGAGAGTCTAGTGAACCCGTCTTCTGAGAGGTTTATGTGGGCTGGTAGCTGTCCCCGTGGGCGTACTTGGTCCTACTTAGCTGACATAGTTTTGGCGGAGAAGTATAATCGCTGCCAACTGAAGAAGTCATCAAGGGGGGAAGGCGCAAAAGGTCTCAAGCTCATTTTACTCCACAATTCTCAGTATGGACAGATCCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1069

Amino Acids

118.49

Weight (kDa)

5.13

Isoelectric Point (pI)

51.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Yop-YscD_cpl PF16697 55 - 127 1.3e-08 Inner membrane component of T3SS, cytoplasmic domain
FHA PF00498 59 - 126 6e-17 FHA domain
PIN_4 PF13638 830 - 999 5.1e-19 PIN domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015880)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28650
fragaria_vesca FvH4_2g20490
malus_domestica MD05G1188700.v1.1 MD10G1176300.v1.1
prunus_persica Prupe.8G215300_v2.0.a1
pyrus_communis pycom10g15220
rosa_chinensis RchiOBHm_Chr6g0286591
rosa_laevigata RLG00000012556
rosa_multiflora Rmu_sc0000560.1_g000003
rosa_roxburghii Rroxscaffold_7G00182160
rosa_rugosa Rorug06G0181300
rosa_samantha Rh6AG294200 Rh6BG297300 Rh6CG297700 Rh6DG289600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 564
Acc16I TGCGCA 1 cut(s) 1242
Acc36I ACCTGC 1 cut(s) 1771
AccB1I GGYRCC 3 cut(s) 186, 559, 1226
AccI GTMKAC 1 cut(s) 1584
AciI CCGC 5 cut(s) 6, 122, 742, 1058, 3104
AclWI GGATC 8 cut(s) 317, 745, 1036, 1614, 1704, 2695, 2708, 3196
AcoI YGGCCR 1 cut(s) 826
AcsI RAATTY 6 cut(s) 499, 689, 1027, 1685, 2456, 3002
AcuI CTGAAG 5 cut(s) 795, 2313, 2355, 2975, 3149
AfaI GTAC 2 cut(s) 929, 3073
AfiI CCNNNNNNNGG 4 cut(s) 267, 569, 1165, 2518
AflII CTTAAG 3 cut(s) 68, 2555, 2827
AjiI CACGTC 1 cut(s) 1487
AjnI CCWGG 6 cut(s) 331, 654, 975, 1249, 1437, 2155
AjuI GAANNNNNNNTTGG 2 cut(s) 576, 608
AloI GAACNNNNNNTCC 2 cut(s) 2913, 2945
Alw21I GWGCWC 1 cut(s) 2893
Alw26I GTCTC 4 cut(s) 1055, 2772, 2984, 3167
AlwI GGATC 8 cut(s) 317, 745, 1036, 1614, 1704, 2695, 2708, 3196
AlwNI CAGNNNCTG 1 cut(s) 482
Ama87I CYCGRG 1 cut(s) 564
AoxI GGCC 2 cut(s) 826, 855
ApeKI GCWGC 6 cut(s) 1238, 2259, 2355, 2622, 2864, 3120
ApoI RAATTY 6 cut(s) 499, 689, 1027, 1685, 2456, 3002
AseI ATTAAT 1 cut(s) 545
Asp700I GAANNNNTTC 1 cut(s) 95
AspLEI GCGC 2 cut(s) 1243, 3155
AspS9I GGNCC 6 cut(s) 855, 1010, 1325, 1932, 2043, 3078
AsuHPI GGTGA 9 cut(s) 206, 271, 731, 815, 886, 1406, 1506, 1587, 2941
AvaI CYCGRG 1 cut(s) 564
AvaII GGWCC 5 cut(s) 1010, 1325, 1932, 2043, 3078
BaeGI GKGCMC 1 cut(s) 2337
BalI TGGCCA 1 cut(s) 828
BamHI GGATCC 1 cut(s) 2700
BanI GGYRCC 3 cut(s) 186, 559, 1226
BanII GRGCYC 1 cut(s) 45
BarI GAAGNNNNNNTAC 2 cut(s) 2862, 2894
BbsI GAAGAC 4 cut(s) 789, 903, 2737, 3021
Bbv12I GWGCWC 1 cut(s) 2893
BbvCI CCTCAGC 1 cut(s) 350
BbvI GCAGC 6 cut(s) 1225, 2271, 2367, 2634, 2876, 3107
BccI CCATC 6 cut(s) 159, 763, 1127, 1417, 1559, 2720
BceAI ACGGC 1 cut(s) 200
BcgI CGANNNNNNTGC 2 cut(s) 2254, 2288
BciT130I CCWGG 6 cut(s) 333, 656, 977, 1251, 1439, 2157
BciVI GTATCC 1 cut(s) 1534
BclI TGATCA 2 cut(s) 1171, 2571
BcoDI GTCTC 4 cut(s) 1055, 2772, 2984, 3167
BfaI CTAG 6 cut(s) 384, 710, 1767, 2066, 2133, 3017
BfmI CTRYAG 3 cut(s) 394, 1662, 2301
BfrI CTTAAG 3 cut(s) 68, 2555, 2827
BfuAI ACCTGC 1 cut(s) 1771
BfuI GTATCC 1 cut(s) 1534
BglII AGATCT 1 cut(s) 2140
BisI GCNGC 7 cut(s) 7, 1239, 2260, 2356, 2623, 2865, 3121
BlsI GCNGC 7 cut(s) 8, 1240, 2261, 2357, 2624, 2866, 3122
Bme1390I CCNGG 6 cut(s) 333, 656, 977, 1251, 1439, 2157
Bme18I GGWCC 5 cut(s) 1010, 1325, 1932, 2043, 3078
BmeT110I CYCGRG 1 cut(s) 564
BmgBI CACGTC 1 cut(s) 1487
BmgT120I GGNCC 6 cut(s) 855, 1010, 1325, 1932, 2043, 3078
BmiI GGNNCC 5 cut(s) 135, 188, 561, 1228, 2702
BmrFI CCNGG 6 cut(s) 333, 656, 977, 1251, 1439, 2157
BmrI ACTGGG 2 cut(s) 47, 2226
BmsI GCATC 2 cut(s) 2238, 2262
BmuI ACTGGG 2 cut(s) 47, 2226
BoxI GACNNNNGTC 1 cut(s) 2041
BpiI GAAGAC 4 cut(s) 789, 903, 2737, 3021
BplI GAGNNNNNCTC 2 cut(s) 69, 101
BpmI CTGGAG 3 cut(s) 1875, 2139, 2484
Bpu10I CCTNAGC 2 cut(s) 350, 368
BpuEI CTTGAG 4 cut(s) 71, 1962, 2982, 3149
BsaAI YACGTR 1 cut(s) 931
BsaI GGTCTC 1 cut(s) 3167
BsaWI WCCGGW 1 cut(s) 556
Bsc4I CCNNNNNNNGG 4 cut(s) 267, 569, 1165, 2518
Bse1I ACTGG 7 cut(s) 53, 410, 464, 925, 2221, 2604, 2724
Bse3DI GCAATG 2 cut(s) 2534, 2920
BseBI CCWGG 6 cut(s) 333, 656, 977, 1251, 1439, 2157
BseGI GGATG 6 cut(s) 1031, 1138, 1346, 1975, 2096, 2277
BseLI CCNNNNNNNGG 4 cut(s) 267, 569, 1165, 2518
BseMI GCAATG 2 cut(s) 2534, 2920
BseMII CTCAG 9 cut(s) 341, 382, 457, 1626, 1697, 1919, 2030, 3024, 3203
BseNI ACTGG 7 cut(s) 53, 410, 464, 925, 2221, 2604, 2724
BseRI GAGGAG 5 cut(s) 250, 582, 585, 1546, 1997
BseSI GKGCMC 1 cut(s) 2337
BseXI GCAGC 6 cut(s) 1225, 2271, 2367, 2634, 2876, 3107
BseYI CCCAGC 1 cut(s) 218
BsgI GTGCAG 1 cut(s) 1642
BshFI GGCC 2 cut(s) 828, 857
BshNI GGYRCC 3 cut(s) 186, 559, 1226
BsiHKAI GWGCWC 1 cut(s) 2893
BsiHKCI CYCGRG 1 cut(s) 564
BsiSI CCGG 1 cut(s) 557
BslFI GGGAC 9 cut(s) 316, 374, 993, 1267, 2360, 2575, 2805, 2934, 3045
BslI CCNNNNNNNGG 4 cut(s) 267, 569, 1165, 2518
BsmAI GTCTC 4 cut(s) 1055, 2772, 2984, 3167
BsmBI CGTCTC 1 cut(s) 1055
BsmFI GGGAC 9 cut(s) 316, 374, 993, 1267, 2360, 2575, 2805, 2934, 3045
BsnI GGCC 2 cut(s) 828, 857
Bso31I GGTCTC 1 cut(s) 3167
BsoBI CYCGRG 1 cut(s) 564
Bsp1286I GDGCHC 3 cut(s) 45, 2337, 2893
Bsp19I CCATGG 4 cut(s) 298, 1159, 1288, 2967
BspACI CCGC 5 cut(s) 6, 122, 742, 1058, 3104
BspANI GGCC 2 cut(s) 828, 857
BspCNI CTCAG 9 cut(s) 342, 381, 456, 1625, 1698, 1920, 2031, 3025, 3202
BspLI GGNNCC 5 cut(s) 135, 188, 561, 1228, 2702
BspMAI CTGCAG 2 cut(s) 1666, 2305
BspMI ACCTGC 1 cut(s) 1771
BspPI GGATC 8 cut(s) 317, 745, 1036, 1614, 1704, 2695, 2708, 3196
BspQI GCTCTTC 1 cut(s) 33
BspT107I GGYRCC 3 cut(s) 186, 559, 1226
BspTI CTTAAG 3 cut(s) 68, 2555, 2827
BspTNI GGTCTC 1 cut(s) 3167
BsrDI GCAATG 2 cut(s) 2534, 2920
BsrI ACTGG 7 cut(s) 53, 410, 464, 925, 2221, 2604, 2724
BssT1I CCWWGG 5 cut(s) 298, 1159, 1288, 1369, 2967
Bst2UI CCWGG 6 cut(s) 333, 656, 977, 1251, 1439, 2157
Bst4CI ACNGT 6 cut(s) 28, 64, 1813, 2616, 2766, 2786
Bst6I CTCTTC 8 cut(s) 33, 314, 615, 1215, 1747, 1926, 2037, 2667
BstAFI CTTAAG 3 cut(s) 68, 2555, 2827
BstBAI YACGTR 1 cut(s) 931
BstC8I GCNNGC 3 cut(s) 389, 2305, 2862
BstDSI CCRYGG 5 cut(s) 298, 1159, 1288, 2967, 3064
BstENI CCTNNNNNAGG 3 cut(s) 265, 567, 2516
BstF5I GGATG 6 cut(s) 1031, 1138, 1346, 1975, 2096, 2277
BstHHI GCGC 2 cut(s) 1243, 3155
BstMAI GTCTC 4 cut(s) 1055, 2772, 2984, 3167
BstMWI GCNNNNNNNGC 4 cut(s) 397, 1235, 1278, 2313
BstNI CCWGG 6 cut(s) 333, 656, 977, 1251, 1439, 2157
BstPAI GACNNNNGTC 1 cut(s) 2041
BstSCI CCNGG 6 cut(s) 331, 654, 975, 1249, 1437, 2155
BstSFI CTRYAG 3 cut(s) 394, 1662, 2301
BstSLI GKGCMC 1 cut(s) 2337
BstV1I GCAGC 6 cut(s) 1225, 2271, 2367, 2634, 2876, 3107
BstV2I GAAGAC 4 cut(s) 789, 903, 2737, 3021
BstX2I RGATCY 7 cut(s) 309, 750, 1606, 1709, 2140, 2700, 3201
BstYI RGATCY 7 cut(s) 309, 750, 1606, 1709, 2140, 2700, 3201
BsuI GTATCC 1 cut(s) 1534
BsuRI GGCC 2 cut(s) 828, 857
BtgI CCRYGG 5 cut(s) 298, 1159, 1288, 2967, 3064
BtrI CACGTC 1 cut(s) 1487
BtsCI GGATG 6 cut(s) 1031, 1138, 1346, 1975, 2096, 2277
BtsI GCAGTG 1 cut(s) 1659
BtsIMutI CAGTG 8 cut(s) 33, 60, 403, 1659, 2337, 2621, 2717, 2762
BveI ACCTGC 1 cut(s) 1771
Cac8I GCNNGC 3 cut(s) 389, 2305, 2862
CaiI CAGNNNCTG 1 cut(s) 482
CfoI GCGC 2 cut(s) 1243, 3155
Cfr13I GGNCC 6 cut(s) 855, 1010, 1325, 1932, 2043, 3078
CseI GACGC 2 cut(s) 211, 446
CsiI ACCWGGT 1 cut(s) 654
Csp6I GTAC 2 cut(s) 928, 3072
CviAII CATG 8 cut(s) 299, 797, 1160, 1289, 1529, 2705, 2968, 3008
CviQI GTAC 2 cut(s) 928, 3072
EaeI YGGCCR 1 cut(s) 826
Eam1104I CTCTTC 8 cut(s) 33, 314, 615, 1215, 1747, 1926, 2037, 2667
EarI CTCTTC 8 cut(s) 33, 314, 615, 1215, 1747, 1926, 2037, 2667
EciI GGCGGA 2 cut(s) 757, 3119
Eco130I CCWWGG 5 cut(s) 298, 1159, 1288, 1369, 2967
Eco24I GRGCYC 1 cut(s) 45
Eco31I GGTCTC 1 cut(s) 3167
Eco32I GATATC 2 cut(s) 991, 2185
Eco47I GGWCC 5 cut(s) 1010, 1325, 1932, 2043, 3078
Eco57I CTGAAG 5 cut(s) 795, 2313, 2355, 2975, 3149
Eco88I CYCGRG 1 cut(s) 564
EcoNI CCTNNNNNAGG 3 cut(s) 265, 567, 2516
EcoO109I RGGNCCY 2 cut(s) 1932, 2043
EcoRI GAATTC 3 cut(s) 1027, 1685, 3002
EcoRII CCWGG 6 cut(s) 331, 654, 975, 1249, 1437, 2155
EcoRV GATATC 2 cut(s) 991, 2185
EcoT14I CCWWGG 5 cut(s) 298, 1159, 1288, 1369, 2967
EcoT38I GRGCYC 1 cut(s) 45
ErhI CCWWGG 5 cut(s) 298, 1159, 1288, 1369, 2967
Esp3I CGTCTC 1 cut(s) 1055
FaeI CATG 8 cut(s) 302, 800, 1163, 1292, 1532, 2708, 2971, 3011
FaqI GGGAC 9 cut(s) 316, 374, 993, 1267, 2360, 2575, 2805, 2934, 3045
FatI CATG 8 cut(s) 298, 796, 1159, 1288, 1528, 2704, 2967, 3007
FbaI TGATCA 2 cut(s) 1171, 2571
FblI GTMKAC 1 cut(s) 1584
Fnu4HI GCNGC 7 cut(s) 7, 1239, 2260, 2356, 2623, 2865, 3121
FokI GGATG 6 cut(s) 1018, 1145, 1333, 1982, 2083, 2284
FriOI GRGCYC 1 cut(s) 45
Fsp4HI GCNGC 7 cut(s) 7, 1239, 2260, 2356, 2623, 2865, 3121
FspBI CTAG 6 cut(s) 384, 710, 1767, 2066, 2133, 3017
FspI TGCGCA 1 cut(s) 1242
GlaI GCGC 2 cut(s) 1242, 3154
GluI GCNGC 7 cut(s) 7, 1239, 2260, 2356, 2623, 2865, 3121
GsaI CCCAGC 1 cut(s) 222
GsuI CTGGAG 3 cut(s) 1875, 2139, 2484
HaeIII GGCC 2 cut(s) 828, 857
HapII CCGG 1 cut(s) 557
HgaI GACGC 2 cut(s) 211, 446
HhaI GCGC 2 cut(s) 1243, 3155
Hin1II CATG 8 cut(s) 302, 800, 1163, 1292, 1532, 2708, 2971, 3011
Hin6I GCGC 2 cut(s) 1241, 3153
HinP1I GCGC 2 cut(s) 1241, 3153
HincII GTYRAC 3 cut(s) 106, 210, 1435
HindII GTYRAC 3 cut(s) 106, 210, 1435
HindIII AAGCTT 4 cut(s) 847, 1882, 2325, 2367
HpaI GTTAAC 1 cut(s) 1435
HpaII CCGG 1 cut(s) 557
HphI GGTGA 9 cut(s) 206, 271, 731, 815, 886, 1406, 1506, 1587, 2941
Hpy99I CGWCG 2 cut(s) 14, 182
HpyCH4III ACNGT 6 cut(s) 28, 64, 1813, 2616, 2766, 2786
HpyCH4IV ACGT 2 cut(s) 930, 1486
HpyCH4V TGCA 7 cut(s) 198, 934, 1659, 1664, 2303, 2495, 2539
HpyF10VI GCNNNNNNNGC 4 cut(s) 397, 1235, 1278, 2313
HpySE526I ACGT 2 cut(s) 930, 1486
Hsp92II CATG 8 cut(s) 302, 800, 1163, 1292, 1532, 2708, 2971, 3011
HspAI GCGC 2 cut(s) 1241, 3153
Ksp22I TGATCA 2 cut(s) 1171, 2571
KspAI GTTAAC 1 cut(s) 1435
LguI GCTCTTC 1 cut(s) 33
LmnI GCTCC 3 cut(s) 77, 1984, 2746
Lsp1109I GCAGC 6 cut(s) 1225, 2271, 2367, 2634, 2876, 3107
LweI GCATC 2 cut(s) 2238, 2262
MabI ACCWGGT 1 cut(s) 654
MaeI CTAG 6 cut(s) 384, 710, 1767, 2066, 2133, 3017
MaeII ACGT 2 cut(s) 930, 1486
MaeIII GTNAC 7 cut(s) 635, 946, 1333, 1512, 1570, 1774, 2942
MfeI CAATTG 2 cut(s) 675, 1175
MflI RGATCY 7 cut(s) 309, 750, 1606, 1709, 2140, 2700, 3201
MhlI GDGCHC 3 cut(s) 45, 2337, 2893
MlsI TGGCCA 1 cut(s) 828
MluNI TGGCCA 1 cut(s) 828
MlyI GAGTC 8 cut(s) 205, 524, 893, 1109, 1580, 1636, 2557, 3022
MmeI TCCRAC 2 cut(s) 160, 2768
Mox20I TGGCCA 1 cut(s) 828
MroXI GAANNNNTTC 1 cut(s) 95
MscI TGGCCA 1 cut(s) 828
MseI TTAA 9 cut(s) 69, 545, 1125, 1434, 1962, 2072, 2292, 2556, 2828
MslI CAYNNNNRTG 2 cut(s) 426, 801
Msp20I TGGCCA 1 cut(s) 828
MspA1I CMGCKG 2 cut(s) 1007, 1322
MspCI CTTAAG 3 cut(s) 68, 2555, 2827
MspI CCGG 1 cut(s) 557
MspR9I CCNGG 6 cut(s) 333, 656, 977, 1251, 1439, 2157
MunI CAATTG 2 cut(s) 675, 1175
MvaI CCWGG 6 cut(s) 333, 656, 977, 1251, 1439, 2157
MwoI GCNNNNNNNGC 4 cut(s) 397, 1235, 1278, 2313
NcoI CCATGG 4 cut(s) 298, 1159, 1288, 2967
NlaIII CATG 8 cut(s) 302, 800, 1163, 1292, 1532, 2708, 2971, 3011
NlaIV GGNNCC 5 cut(s) 135, 188, 561, 1228, 2702
NmuCI GTSAC 6 cut(s) 635, 946, 1333, 1512, 1570, 2942
NsbI TGCGCA 1 cut(s) 1242
PaeR7I CTCGAG 1 cut(s) 564
PciSI GCTCTTC 1 cut(s) 33
PdmI GAANNNNTTC 1 cut(s) 95
PkrI GCNGC 7 cut(s) 8, 1240, 2261, 2357, 2624, 2866, 3122
PleI GAGTC 8 cut(s) 205, 523, 893, 1109, 1580, 1636, 2557, 3021
PpsI GAGTC 8 cut(s) 205, 523, 893, 1109, 1580, 1636, 2557, 3021
Ppu21I YACGTR 1 cut(s) 931
PpuMI RGGWCCY 2 cut(s) 1932, 2043
PshAI GACNNNNGTC 1 cut(s) 2041
PshBI ATTAAT 1 cut(s) 545
Psp5II RGGWCCY 2 cut(s) 1932, 2043
Psp6I CCWGG 6 cut(s) 331, 654, 975, 1249, 1437, 2155
PspFI CCCAGC 1 cut(s) 218
PspGI CCWGG 6 cut(s) 331, 654, 975, 1249, 1437, 2155
PspN4I GGNNCC 5 cut(s) 135, 188, 561, 1228, 2702
PspPI GGNCC 6 cut(s) 855, 1010, 1325, 1932, 2043, 3078
PspPPI RGGWCCY 2 cut(s) 1932, 2043
PspXI VCTCGAGB 1 cut(s) 564
PstI CTGCAG 2 cut(s) 1666, 2305
PstNI CAGNNNCTG 1 cut(s) 482
PsuI RGATCY 7 cut(s) 309, 750, 1606, 1709, 2140, 2700, 3201
PvuII CAGCTG 2 cut(s) 1007, 1322
RsaI GTAC 2 cut(s) 929, 3073
RsaNI GTAC 2 cut(s) 928, 3072
RseI CAYNNNNRTG 2 cut(s) 426, 801
SapI GCTCTTC 1 cut(s) 33
SaqAI TTAA 9 cut(s) 69, 545, 1125, 1434, 1962, 2072, 2292, 2556, 2828
SatI GCNGC 7 cut(s) 7, 1239, 2260, 2356, 2623, 2865, 3121
Sau96I GGNCC 6 cut(s) 855, 1010, 1325, 1932, 2043, 3078
SchI GAGTC 8 cut(s) 205, 524, 893, 1109, 1580, 1636, 2557, 3022
ScrFI CCNGG 6 cut(s) 333, 656, 977, 1251, 1439, 2157
SduI GDGCHC 3 cut(s) 45, 2337, 2893
SexAI ACCWGGT 1 cut(s) 654
SfaNI GCATC 2 cut(s) 2238, 2262
SfcI CTRYAG 3 cut(s) 394, 1662, 2301
Sfr274I CTCGAG 1 cut(s) 564
SinI GGWCC 5 cut(s) 1010, 1325, 1932, 2043, 3078
SlaI CTCGAG 1 cut(s) 564
SmiMI CAYNNNNRTG 2 cut(s) 426, 801
SmlI CTYRAG 8 cut(s) 68, 86, 564, 1977, 2555, 2827, 2997, 3164
SmoI CTYRAG 8 cut(s) 68, 86, 564, 1977, 2555, 2827, 2997, 3164
SsiI CCGC 5 cut(s) 6, 122, 742, 1058, 3104
SspI AATATT 2 cut(s) 667, 1205
SspMI CTAG 6 cut(s) 384, 710, 1767, 2066, 2133, 3017
StyD4I CCNGG 6 cut(s) 331, 654, 975, 1249, 1437, 2155
StyI CCWWGG 5 cut(s) 298, 1159, 1288, 1369, 2967
TaaI ACNGT 6 cut(s) 28, 64, 1813, 2616, 2766, 2786
TaiI ACGT 2 cut(s) 933, 1489
TaqI TCGA 5 cut(s) 340, 565, 2035, 2105, 2419
TaqII GACCGA 1 cut(s) 801
TauI GCSGC 1 cut(s) 9
Tru1I TTAA 9 cut(s) 69, 545, 1125, 1434, 1962, 2072, 2292, 2556, 2828
Tru9I TTAA 9 cut(s) 69, 545, 1125, 1434, 1962, 2072, 2292, 2556, 2828
TscAI CASTG 8 cut(s) 33, 60, 410, 1666, 2337, 2621, 2724, 2769
TseFI GTSAC 6 cut(s) 635, 946, 1333, 1512, 1570, 2942
TseI GCWGC 6 cut(s) 1238, 2259, 2355, 2622, 2864, 3120
Tsp45I GTSAC 6 cut(s) 635, 946, 1333, 1512, 1570, 2942
TspGWI ACGGA 3 cut(s) 90, 136, 1352
TspRI CASTG 8 cut(s) 33, 60, 410, 1666, 2337, 2621, 2724, 2769
Vha464I CTTAAG 3 cut(s) 68, 2555, 2827
VpaK11BI GGWCC 5 cut(s) 1010, 1325, 1932, 2043, 3078
VspI ATTAAT 1 cut(s) 545
XagI CCTNNNNNAGG 3 cut(s) 265, 567, 2516
XapI RAATTY 6 cut(s) 499, 689, 1027, 1685, 2456, 3002
XhoI CTCGAG 1 cut(s) 564
XmiI GTMKAC 1 cut(s) 1584
XmnI GAANNNNTTC 1 cut(s) 95
XspI CTAG 6 cut(s) 384, 710, 1767, 2066, 2133, 3017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.