FvH4_2g20490
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0015880
Physical Location & Seq
Forward (+)
17191870 .. 17195528
3659 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g20490.t1

Sequence Viewer

Length: 3039 bp
ATGAAGATTTTGCTCATCTTCTTCTTGTTTTACTGTTCCATTGGTTTTGCTTCCTATGGTTCAGCTGCTGTGGCCAACAATGATGAAGCATCTGCCTTGCTTTCACTAAAAGCAGGCCTGCTTGATCCATTGGGGAGTCTGAAGAATTGGAAGGCTGAATCTGATCACTGTAAATGGACTGGTGTGTGGTGCAACACTGAGGGTCATGTAGAGAAGCTTGATCTCTCCCACATGAATCTCAGTGGTTCAGTCTCAGGTGACGTCCAATGGCTCAAGAGTCTCACTACTCTCAACCTGTGCTGCAGTACATTCTCTTCAGCATTGCCGAAATCCATGTCAAATCTCACAGCACTGAAGAGCCTTGATGTGAGTCAGAATTCCTTTGTTGGTGATTTTCCGGTGGGACTTGGAAATGCGGATGGCTTGTCATATCTGAATGCTTCTAGCAACAACTTCTCGGGGATTCTCCCCGAGGATCTAGGCAATGCCACAATGCTGGAGACTCTGGATCTTCGAGGGAGCTTCTTTGAAGGGGAGATTCCCAAGTCCTTCAGGAAGTTGCAAAAGCTGAAGTTTCTTGGCCTCTCTGGAAATAACCTCACAGGTCAAATCCCATCAGAGCTTGGGGAGCTGATGTCATTGGAGAGCATCATTCTGGGGTACAATGAGTTCCAAGGTGGGATTCCATTGGAATTTGGAAACCTCACCAACTTGAAGTATCTTGATTTGGCAGTTGGCAATCTCAGTGGTGAGATTCCAGCCGAGTTGGGAAAGCTGAAGCTGCTAGAGACAGTGTTCTTGTACAAGAACAACTTTGAAGGTAGAATCCCTCCTCAGATTGGCACCATTCCTTCGTTGCAGTTGCTTGATCTCTCCGATAACAAGTTATCAGGTGAAATCCCAGCTGAGATAGGTGAGCTGAAGAATCTGCAGCTTCTGAATCTCATGTGCAATAAGCTGTCAGGTTCAGTGCCACTGGGACTTGGAAACTTGACTCAGTTGGCGGTGCTTGAGCTGTGGAACAATTCTTTATCAGGGTCTTTACCAAGTGATCTTGGTAAAAGTGCTCCATTGGTGTGGTTGGATGTATCATCCAATTCATTTACCGGTGAGATTCCAGCGACATTGTGCAACAAGGGCAATCTTACCAAGCTCATCCTCTTCAACAATGCCTTCACAGGTCCAATTCCAGTTGGCTTGTCAACCTGTGTTTCACTTGTTCGTGTCCGAATGCAGAACAATCTTCTTTCAGGGACAATTCCAGTTGGTCTTGGCAAGCTTGGGAGGCTTCAAAGGTTAGAGTTGGCTAATAACTATCTCACTGGTGCACTACCAGATGACATTTCTTCTTCTACTTCAATTTCTTTTATTGATCTCTCTCGAAACCGCCTACATTATTCTCTTCCTTCCACCATTCTCTCTGCTCCAAGTTTGCAAACCTTCATGGCCTCCAATAACTTCTTAGTAGGAGAGATTCCAGACCAGTTCCAGGATTGTCCTTCGCTTTCTGTGCTTGATCTCTCATCAAACAGTTTCTCTGGAACCATTCCAGCAAGCATTGCTTCATGTGAGAGATTAGTGAATTTGAATCTTGCCAACAACCAGTTGACTGGTGAAATCCCAAAGTCTATTGCCATGATGCCCACATTGTCCATTTTGGACTTGTCTAACAACTCTCTCACTGGAGGTATACCAGAAAATTTCGGTATCTCTCCAGCCTTGGAAACTCTCAATGTCTCATACAACAAGCTAGAGGGTGCTGTCCCAGCAAATGGCGTGCTTCGAACAATAAATCCGAGTGACCTTGTAGGCAATGCCGGTCTCTGTGGTAGTGTGCTGCCTCCTTGTGCTAGAAATCCAGCATTGGGATCAAGGCATAGGAGCTTGCATACAAAGAAGATTATTGAAGGGTGGGTGATTGGGATTTCTTCAGCTTTAGCAGTCTGCACTGCACTTTTTGGTGCAAGGTTCGTATACAAAAGATGGTATGCGAATGGAAGCTGCTTCGAAGATAGGTTCGATGTGGGAAATGGAGAGTGGCCATGGAGGTTAATGGCATTCCAGAGGCTTGGGTTTACAACTGCTGACATTCTGGCTTGTGTGAAGGAATCAAATGTGATTGGAATGGGAGCTACTGGCATTGTCTACAAGGCTGAGATAACAAGATCAAACACAGTTGTTGCTGTTAAGAAGCTGTGGAGACCAGCAACAGATGTTGAAACTGGTAGCAGTGGTGATCTAGTAGGGGAAGTGAATCTCTTGGGGAGGCTAAGGCATCGAAACATTGTTCGATTACTAGGTTTTCTGAACAATGACACCAATTTGATGATAATATATGAGTATATGAACAATGGCAGCCTTGGAGAAGCCCTTCATGGCAAGCAAGCTGCAAGGTTGCTTGTAGATTGGGTTTCAAGGTATAACATAGCAGTCGGAGTTGCGCAAGGTCTCGCTTATCTCCACCATGATTGTCACCCACCAGTCATTCATAGAGACATCAAGTCCAACAACATACTACTTGATGCAAACCTTGAAGCTAGGATTGCAGATTTCGGGTTGGCAAGGATGATGGTCCGGAAAAATGAGACAGTTTCCATGGTGGCTGGTTCATACGGCTACATTGCCCCTGAATATGGATACACATTGAAGGTTGATGAGAAGATTGACATCTACAGCTATGGTGTGGTACTATTGGAGCTTCTAACCGGAAAGAGGCCATTAGACCCTGAGTTTGGAGAGTCAGTAGACATTGTGGAATGGATTCGAAGGAAGATTAGGGACAACAAATGCTTAGAAGAAGTATTAGACCCAAGTGTAGGAAATTCCAAGCATGTTCAAGAGGAGATGCTCTTAGTCCTTAGAATAGCACTTGTTTGCACTACCAAGCTTCCCAAGGACAGACCCTCCATGAGAGATGTCATAACCATGCTTGGAGAAGCAAAGCCTCGAAGGAAAAGCAGTAGCAACAACAATGATGCATATGCAACTAACAAAGACCAACCTGTCTTTAGTACCTCACCTGTAAATGGTCTTCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase

Protein Analysis

1013

Amino Acids

109.78

Weight (kDa)

6.01

Isoelectric Point (pI)

30.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 65 6.6e-11 Leucine rich repeat N-terminal domain
LRR_8 PF13855 93 - 152 7.7e-06 Leucine rich repeat
LRR_14 PF23598 141 - 217 3.9e-07 Leucine-rich repeat region
LRR_14 PF23598 232 - 340 4.3e-12 Leucine-rich repeat region
LRR_14 PF23598 327 - 559 2e-08 Leucine-rich repeat region
LRR_8 PF13855 476 - 536 1.1e-07 Leucine rich repeat
LRR_8 PF13855 525 - 584 1.2e-06 Leucine rich repeat
Pkinase PF00069 703 - 974 6.3e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 703 - 976 6.4e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015880)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28650
fragaria_vesca FvH4_2g20490
malus_domestica MD05G1188700.v1.1 MD10G1176300.v1.1
prunus_persica Prupe.8G215300_v2.0.a1
pyrus_communis pycom10g15220
rosa_chinensis RchiOBHm_Chr6g0286591
rosa_laevigata RLG00000012556
rosa_multiflora Rmu_sc0000560.1_g000003
rosa_roxburghii Rroxscaffold_7G00182160
rosa_rugosa Rorug06G0181300
rosa_samantha Rh6AG294200 Rh6BG297300 Rh6CG297700 Rh6DG289600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 3002
AatII GACGTC 1 cut(s) 264
Acc16I TGCGCA 1 cut(s) 2442
AccB1I GGYRCC 1 cut(s) 842
AccB7I CCANNNNNTGG 1 cut(s) 1772
AccI GTMKAC 4 cut(s) 1690, 1974, 2145, 2745
AccIII TCCGGA 1 cut(s) 2574
AciI CCGC 3 cut(s) 416, 1004, 1387
AclWI GGATC 4 cut(s) 119, 483, 516, 1876
AcoI YGGCCR 2 cut(s) 72, 2039
AcsI RAATTY 5 cut(s) 376, 692, 1582, 1699, 2821
AcuI CTGAAG 8 cut(s) 161, 300, 374, 535, 590, 797, 941, 1914
AcyI GRCGYC 1 cut(s) 261
AfaI GTAC 5 cut(s) 307, 662, 803, 2688, 3013
AfiI CCNNNNNNNGG 9 cut(s) 839, 1489, 1772, 1865, 2633, 2712, 2732, 2816, 3026
AgeI ACCGGT 1 cut(s) 1106
AhdI GACNNNNNGTC 1 cut(s) 2500
AjnI CCWGG 1 cut(s) 1488
AjuI GAANNNNNNNTTGG 2 cut(s) 666, 698
AloI GAACNNNNNNTCC 2 cut(s) 1777, 1809
Alw21I GWGCWC 2 cut(s) 1069, 1330
Alw44I GTGCAC 1 cut(s) 1326
AlwI GGATC 4 cut(s) 119, 483, 516, 1876
AlwNI CAGNNNCTG 2 cut(s) 68, 937
Ama87I CYCGRG 2 cut(s) 457, 470
Aor13HI TCCGGA 1 cut(s) 2574
AoxI GGCC 6 cut(s) 72, 115, 580, 1446, 2039, 2714
ApaLI GTGCAC 1 cut(s) 1326
ApeKI GCWGC 8 cut(s) 65, 300, 781, 931, 1837, 2001, 2355, 2387
ApoI RAATTY 5 cut(s) 376, 692, 1582, 1699, 2821
ArsI GACNNNNNNTTYG 4 cut(s) 320, 352, 2714, 2746
AsiGI ACCGGT 1 cut(s) 1106
Asp700I GAANNNNTTC 2 cut(s) 2370, 2760
AspLEI GCGC 1 cut(s) 2443
AspS9I GGNCC 2 cut(s) 1181, 2572
AsuII TTCGAA 3 cut(s) 1783, 2007, 2764
AvaI CYCGRG 2 cut(s) 457, 470
AvaII GGWCC 2 cut(s) 1181, 2572
BaeGI GKGCMC 1 cut(s) 1330
BalI TGGCCA 2 cut(s) 74, 2041
BanI GGYRCC 1 cut(s) 842
BarI GAAGNNNNNNTAC 3 cut(s) 298, 330, 3015
BbsI GAAGAC 1 cut(s) 3023
Bbv12I GWGCWC 2 cut(s) 1069, 1330
BbvI GCAGC 8 cut(s) 52, 287, 768, 943, 1824, 1988, 2367, 2374
BccI CCATC 4 cut(s) 413, 622, 1977, 2563
BceAI ACGGC 1 cut(s) 2629
BciT130I CCWGG 1 cut(s) 1490
BciVI GTATCC 1 cut(s) 2630
BclI TGATCA 1 cut(s) 163
BfaI CTAG 8 cut(s) 444, 479, 785, 1751, 1851, 2240, 2297, 2538
BfmI CTRYAG 4 cut(s) 301, 929, 2671, 3035
BfuI GTATCC 1 cut(s) 2630
BisI GCNGC 8 cut(s) 66, 301, 782, 932, 1838, 2002, 2356, 2388
BlsI GCNGC 8 cut(s) 67, 302, 783, 933, 1839, 2003, 2357, 2389
Bme1390I CCNGG 1 cut(s) 1490
Bme18I GGWCC 2 cut(s) 1181, 2572
BmeRI GACNNNNNGTC 1 cut(s) 2500
BmeT110I CYCGRG 2 cut(s) 457, 470
BmgT120I GGNCC 2 cut(s) 1181, 2572
BmiI GGNNCC 2 cut(s) 844, 1543
BmrFI CCNGG 1 cut(s) 1490
BmrI ACTGGG 1 cut(s) 986
BmsI GCATC 7 cut(s) 98, 657, 1629, 2284, 2512, 2835, 2965
BmuI ACTGGG 1 cut(s) 986
BpiI GAAGAC 1 cut(s) 3023
BpmI CTGGAG 3 cut(s) 518, 1698, 1704
Bpu10I CCTNAGC 1 cut(s) 2270
Bpu14I TTCGAA 3 cut(s) 1783, 2007, 2764
BpuEI CTTGAG 2 cut(s) 257, 1031
BsaBI GATNNNNATC 1 cut(s) 2666
BsaHI GRCGYC 1 cut(s) 261
BsaI GGTCTC 3 cut(s) 1826, 2194, 2453
BsaJI CCNNGG 7 cut(s) 471, 673, 1719, 2042, 2359, 2595, 2892
BsaWI WCCGGW 4 cut(s) 397, 1106, 2574, 2705
BsaXI ACNNNNNCTCC 6 cut(s) 620, 650, 2727, 2757, 2888, 2918
Bsc4I CCNNNNNNNGG 9 cut(s) 839, 1489, 1772, 1865, 2633, 2712, 2732, 2816, 3026
Bse118I RCCGGY 2 cut(s) 1106, 1817
Bse3DI GCAATG 5 cut(s) 320, 490, 1557, 1819, 2619
Bse8I GATNNNNATC 1 cut(s) 2666
BseAI TCCGGA 1 cut(s) 2574
BseBI CCWGG 1 cut(s) 1490
BseDI CCNNGG 7 cut(s) 471, 673, 1719, 2042, 2359, 2595, 2892
BseGI GGATG 5 cut(s) 424, 1090, 1091, 1155, 2571
BseJI GATNNNNATC 1 cut(s) 2666
BseLI CCNNNNNNNGG 9 cut(s) 839, 1489, 1772, 1865, 2633, 2712, 2732, 2816, 3026
BseMI GCAATG 5 cut(s) 320, 490, 1557, 1819, 2619
BseMII CTCAG 9 cut(s) 189, 253, 267, 757, 848, 897, 1010, 2145, 2718
BseRI GAGGAG 2 cut(s) 822, 2855
BseSI GKGCMC 1 cut(s) 1330
BseXI GCAGC 8 cut(s) 52, 287, 768, 943, 1824, 1988, 2367, 2374
BseYI CCCAGC 2 cut(s) 901, 1765
BsgI GTGCAG 2 cut(s) 1930, 1935
BshFI GGCC 6 cut(s) 74, 117, 582, 1448, 2041, 2716
BshNI GGYRCC 1 cut(s) 842
BshTI ACCGGT 1 cut(s) 1106
BsiHKAI GWGCWC 2 cut(s) 1069, 1330
BsiHKCI CYCGRG 2 cut(s) 457, 470
BsiSI CCGG 5 cut(s) 398, 1107, 1818, 2575, 2706
BslFI GGGAC 5 cut(s) 417, 993, 1267, 1748, 2792
BslI CCNNNNNNNGG 9 cut(s) 839, 1489, 1772, 1865, 2633, 2712, 2732, 2816, 3026
BsmFI GGGAC 5 cut(s) 417, 993, 1267, 1748, 2792
BsmI GAATGC 3 cut(s) 442, 1236, 2057
BsnI GGCC 6 cut(s) 74, 117, 582, 1448, 2041, 2716
Bso31I GGTCTC 3 cut(s) 1826, 2194, 2453
BsoBI CYCGRG 2 cut(s) 457, 470
Bsp119I TTCGAA 3 cut(s) 1783, 2007, 2764
Bsp1286I GDGCHC 2 cut(s) 1069, 1330
Bsp13I TCCGGA 1 cut(s) 2574
Bsp1407I TGTACA 1 cut(s) 801
Bsp19I CCATGG 2 cut(s) 2042, 2595
BspACI CCGC 3 cut(s) 416, 1004, 1387
BspANI GGCC 6 cut(s) 74, 117, 582, 1448, 2041, 2716
BspCNI CTCAG 9 cut(s) 190, 252, 266, 756, 847, 898, 1009, 2146, 2719
BspEI TCCGGA 1 cut(s) 2574
BspLI GGNNCC 2 cut(s) 844, 1543
BspMAI CTGCAG 2 cut(s) 305, 933
BspPI GGATC 4 cut(s) 119, 483, 516, 1876
BspQI GCTCTTC 1 cut(s) 350
BspT104I TTCGAA 3 cut(s) 1783, 2007, 2764
BspT107I GGYRCC 1 cut(s) 842
BspTNI GGTCTC 3 cut(s) 1826, 2194, 2453
BsrDI GCAATG 5 cut(s) 320, 490, 1557, 1819, 2619
BsrFI RCCGGY 2 cut(s) 1106, 1817
BsrGI TGTACA 1 cut(s) 801
BssAI RCCGGY 2 cut(s) 1106, 1817
BssECI CCNNGG 7 cut(s) 471, 673, 1719, 2042, 2359, 2595, 2892
BssNAI GTATAC 2 cut(s) 1691, 1975
BssNI GRCGYC 1 cut(s) 261
BssT1I CCWWGG 6 cut(s) 673, 1719, 2042, 2359, 2595, 2892
Bst1107I GTATAC 2 cut(s) 1691, 1975
Bst2UI CCWGG 1 cut(s) 1490
Bst4CI ACNGT 6 cut(s) 35, 170, 793, 1532, 2176, 2590
Bst6I CTCTTC 4 cut(s) 319, 350, 1166, 1407
BstACI GRCGYC 1 cut(s) 261
BstAPI GCANNNNNTGC 1 cut(s) 1559
BstAUI TGTACA 1 cut(s) 801
BstBI TTCGAA 3 cut(s) 1783, 2007, 2764
BstC8I GCNNGC 8 cut(s) 115, 119, 1277, 1555, 1778, 1886, 2381, 2385
BstDSI CCRYGG 2 cut(s) 2042, 2595
BstF5I GGATG 5 cut(s) 424, 1090, 1091, 1155, 2571
BstHHI GCGC 1 cut(s) 2443
BstMWI GCNNNNNNNGC 9 cut(s) 71, 628, 781, 1137, 1285, 1510, 1559, 1766, 2543
BstNI CCWGG 1 cut(s) 1490
BstNSI RCATGY 1 cut(s) 2834
BstSCI CCNGG 1 cut(s) 1488
BstSFI CTRYAG 4 cut(s) 301, 929, 2671, 3035
BstSLI GKGCMC 1 cut(s) 1330
BstV1I GCAGC 8 cut(s) 52, 287, 768, 943, 1824, 1988, 2367, 2374
BstV2I GAAGAC 1 cut(s) 3023
BstX2I RGATCY 2 cut(s) 475, 508
BstXI CCANNNNNNTGG 4 cut(s) 496, 1077, 1610, 2069
BstYI RGATCY 2 cut(s) 475, 508
BstZ17I GTATAC 2 cut(s) 1691, 1975
BsuI GTATCC 1 cut(s) 2630
BsuRI GGCC 6 cut(s) 74, 117, 582, 1448, 2041, 2716
BtgI CCRYGG 2 cut(s) 2042, 2595
BtsCI GGATG 5 cut(s) 424, 1090, 1091, 1155, 2571
BtsI GCAGTG 2 cut(s) 1947, 2236
Cac8I GCNNGC 8 cut(s) 115, 119, 1277, 1555, 1778, 1886, 2381, 2385
CaiI CAGNNNCTG 2 cut(s) 68, 937
CfoI GCGC 1 cut(s) 2443
Cfr10I RCCGGY 2 cut(s) 1106, 1817
Cfr13I GGNCC 2 cut(s) 1181, 2572
Csp6I GTAC 5 cut(s) 306, 661, 802, 2687, 3012
CspAI ACCGGT 1 cut(s) 1106
CspCI CAANNNNNGTGG 4 cut(s) 727, 762, 2450, 2485
CviQI GTAC 5 cut(s) 306, 661, 802, 2687, 3012
DrdI GACNNNNNNGTC 1 cut(s) 3002
DriI GACNNNNNGTC 1 cut(s) 2500
DseDI GACNNNNNNGTC 1 cut(s) 3002
EaeI YGGCCR 2 cut(s) 72, 2039
Eam1104I CTCTTC 4 cut(s) 319, 350, 1166, 1407
Eam1105I GACNNNNNGTC 1 cut(s) 2500
EarI CTCTTC 4 cut(s) 319, 350, 1166, 1407
Eco130I CCWWGG 6 cut(s) 673, 1719, 2042, 2359, 2595, 2892
Eco147I AGGCCT 1 cut(s) 117
Eco31I GGTCTC 3 cut(s) 1826, 2194, 2453
Eco47I GGWCC 2 cut(s) 1181, 2572
Eco57I CTGAAG 8 cut(s) 161, 300, 374, 535, 590, 797, 941, 1914
Eco88I CYCGRG 2 cut(s) 457, 470
EcoRI GAATTC 1 cut(s) 376
EcoRII CCWGG 1 cut(s) 1488
EcoT14I CCWWGG 6 cut(s) 673, 1719, 2042, 2359, 2595, 2892
EcoT22I ATGCAT 1 cut(s) 2980
ErhI CCWWGG 6 cut(s) 673, 1719, 2042, 2359, 2595, 2892
FalI AAGNNNNNCTT 4 cut(s) 797, 829, 1546, 1578
FaqI GGGAC 5 cut(s) 417, 993, 1267, 1748, 2792
FauNDI CATATG 1 cut(s) 2980
FbaI TGATCA 1 cut(s) 163
FblI GTMKAC 4 cut(s) 1690, 1974, 2145, 2745
Fnu4HI GCNGC 8 cut(s) 66, 301, 782, 932, 1838, 2002, 2356, 2388
FokI GGATG 5 cut(s) 431, 1078, 1097, 1142, 2578
Fsp4HI GCNGC 8 cut(s) 66, 301, 782, 932, 1838, 2002, 2356, 2388
FspBI CTAG 8 cut(s) 444, 479, 785, 1751, 1851, 2240, 2297, 2538
FspI TGCGCA 1 cut(s) 2442
GlaI GCGC 1 cut(s) 2442
GluI GCNGC 8 cut(s) 66, 301, 782, 932, 1838, 2002, 2356, 2388
GsaI CCCAGC 2 cut(s) 905, 1769
GsuI CTGGAG 3 cut(s) 518, 1698, 1704
HaeIII GGCC 6 cut(s) 74, 117, 582, 1448, 2041, 2716
HapII CCGG 5 cut(s) 398, 1107, 1818, 2575, 2706
HhaI GCGC 1 cut(s) 2443
Hin1I GRCGYC 1 cut(s) 261
Hin6I GCGC 1 cut(s) 2441
HinP1I GCGC 1 cut(s) 2441
HincII GTYRAC 2 cut(s) 1203, 1608
HindII GTYRAC 2 cut(s) 1203, 1608
HindIII AAGCTT 3 cut(s) 215, 1277, 2885
HpaII CCGG 5 cut(s) 398, 1107, 1818, 2575, 2706
Hpy166II GTNNAC 8 cut(s) 1203, 1328, 1608, 1691, 1975, 2076, 2146, 2746
Hpy8I GTNNAC 8 cut(s) 1203, 1328, 1608, 1691, 1975, 2076, 2146, 2746
HpyCH4III ACNGT 6 cut(s) 35, 170, 793, 1532, 2176, 2590
HpyCH4IV ACGT 1 cut(s) 261
HpyF10VI GCNNNNNNNGC 9 cut(s) 71, 628, 781, 1137, 1285, 1510, 1559, 1766, 2543
HpySE526I ACGT 1 cut(s) 261
Hsp92I GRCGYC 1 cut(s) 261
HspAI GCGC 1 cut(s) 2441
Kpn2I TCCGGA 1 cut(s) 2574
Ksp22I TGATCA 1 cut(s) 163
LguI GCTCTTC 1 cut(s) 350
LmnI GCTCC 7 cut(s) 519, 628, 1072, 1429, 1881, 2129, 2695
Lsp1109I GCAGC 8 cut(s) 52, 287, 768, 943, 1824, 1988, 2367, 2374
LweI GCATC 7 cut(s) 98, 657, 1629, 2284, 2512, 2835, 2965
MaeI CTAG 8 cut(s) 444, 479, 785, 1751, 1851, 2240, 2297, 2538
MaeII ACGT 1 cut(s) 261
MaeIII GTNAC 3 cut(s) 257, 1799, 2471
MflI RGATCY 2 cut(s) 475, 508
MhlI GDGCHC 2 cut(s) 1069, 1330
MlsI TGGCCA 2 cut(s) 74, 2041
MluNI TGGCCA 2 cut(s) 74, 2041
MlyI GAGTC 6 cut(s) 145, 286, 379, 496, 988, 2747
MmeI TCCRAC 3 cut(s) 1062, 2413, 2529
Mox20I TGGCCA 2 cut(s) 74, 2041
Mph1103I ATGCAT 1 cut(s) 2980
MroI TCCGGA 1 cut(s) 2574
MroXI GAANNNNTTC 2 cut(s) 2370, 2760
MscI TGGCCA 2 cut(s) 74, 2041
MseI TTAA 2 cut(s) 2051, 2187
MslI CAYNNNNRTG 2 cut(s) 1075, 2924
Msp20I TGGCCA 2 cut(s) 74, 2041
MspA1I CMGCKG 2 cut(s) 65, 905
MspI CCGG 5 cut(s) 398, 1107, 1818, 2575, 2706
MspR9I CCNGG 1 cut(s) 1490
Mva1269I GAATGC 3 cut(s) 442, 1236, 2057
MvaI CCWGG 1 cut(s) 1490
MwoI GCNNNNNNNGC 9 cut(s) 71, 628, 781, 1137, 1285, 1510, 1559, 1766, 2543
NcoI CCATGG 2 cut(s) 2042, 2595
NdeI CATATG 1 cut(s) 2980
NlaIV GGNNCC 2 cut(s) 844, 1543
NmeAIII GCCGAG 1 cut(s) 787
NmuCI GTSAC 3 cut(s) 257, 1799, 2471
NsbI TGCGCA 1 cut(s) 2442
NsiI ATGCAT 1 cut(s) 2980
NspI RCATGY 1 cut(s) 2834
NspV TTCGAA 3 cut(s) 1783, 2007, 2764
PceI AGGCCT 1 cut(s) 117
PciSI GCTCTTC 1 cut(s) 350
PctI GAATGC 3 cut(s) 442, 1236, 2057
PdmI GAANNNNTTC 2 cut(s) 2370, 2760
PflMI CCANNNNNTGG 1 cut(s) 1772
PfoI TCCNGGA 1 cut(s) 1488
PinAI ACCGGT 1 cut(s) 1106
PkrI GCNGC 8 cut(s) 67, 302, 783, 933, 1839, 2003, 2357, 2389
PleI GAGTC 6 cut(s) 144, 285, 378, 496, 988, 2746
PpsI GAGTC 6 cut(s) 144, 285, 378, 496, 988, 2746
Psp6I CCWGG 1 cut(s) 1488
PspFI CCCAGC 2 cut(s) 901, 1765
PspGI CCWGG 1 cut(s) 1488
PspN4I GGNNCC 2 cut(s) 844, 1543
PspPI GGNCC 2 cut(s) 1181, 2572
PsrI GAACNNNNNNTAC 2 cut(s) 653, 685
PstI CTGCAG 2 cut(s) 305, 933
PstNI CAGNNNCTG 2 cut(s) 68, 937
PsuI RGATCY 2 cut(s) 475, 508
PvuII CAGCTG 2 cut(s) 65, 905
RsaI GTAC 5 cut(s) 307, 662, 803, 2688, 3013
RsaNI GTAC 5 cut(s) 306, 661, 802, 2687, 3012
RseI CAYNNNNRTG 2 cut(s) 1075, 2924
SapI GCTCTTC 1 cut(s) 350
SaqAI TTAA 2 cut(s) 2051, 2187
SatI GCNGC 8 cut(s) 66, 301, 782, 932, 1838, 2002, 2356, 2388
Sau96I GGNCC 2 cut(s) 1181, 2572
SchI GAGTC 6 cut(s) 145, 286, 379, 496, 988, 2747
ScrFI CCNGG 1 cut(s) 1490
SduI GDGCHC 2 cut(s) 1069, 1330
SfaNI GCATC 7 cut(s) 98, 657, 1629, 2284, 2512, 2835, 2965
SfcI CTRYAG 4 cut(s) 301, 929, 2671, 3035
SfuI TTCGAA 3 cut(s) 1783, 2007, 2764
SinI GGWCC 2 cut(s) 1181, 2572
SmiMI CAYNNNNRTG 2 cut(s) 1075, 2924
SmlI CTYRAG 2 cut(s) 272, 1010
SmoI CTYRAG 2 cut(s) 272, 1010
SseBI AGGCCT 1 cut(s) 117
SsiI CCGC 3 cut(s) 416, 1004, 1387
SspMI CTAG 8 cut(s) 444, 479, 785, 1751, 1851, 2240, 2297, 2538
StuI AGGCCT 1 cut(s) 117
StyD4I CCNGG 1 cut(s) 1488
StyI CCWWGG 6 cut(s) 673, 1719, 2042, 2359, 2595, 2892
TaaI ACNGT 6 cut(s) 35, 170, 793, 1532, 2176, 2590
TaiI ACGT 1 cut(s) 264
TaqI TCGA 9 cut(s) 514, 1381, 1783, 2007, 2019, 2278, 2290, 2764, 2947
TatI WGTACW 2 cut(s) 305, 801
Tru1I TTAA 2 cut(s) 2051, 2187
Tru9I TTAA 2 cut(s) 2051, 2187
TseFI GTSAC 3 cut(s) 257, 1799, 2471
TseI GCWGC 8 cut(s) 65, 300, 781, 931, 1837, 2001, 2355, 2387
Tsp45I GTSAC 3 cut(s) 257, 1799, 2471
Van91I CCANNNNNTGG 1 cut(s) 1772
VneI GTGCAC 1 cut(s) 1326
VpaK11BI GGWCC 2 cut(s) 1181, 2572
XapI RAATTY 5 cut(s) 376, 692, 1582, 1699, 2821
XceI RCATGY 1 cut(s) 2834
XmiI GTMKAC 4 cut(s) 1690, 1974, 2145, 2745
XmnI GAANNNNTTC 2 cut(s) 2370, 2760
XspI CTAG 8 cut(s) 444, 479, 785, 1751, 1851, 2240, 2297, 2538
ZraI GACGTC 1 cut(s) 262
Zsp2I ATGCAT 1 cut(s) 2980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.