isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G19390 AT2G19390 AT4G29790 |
| fragaria_vesca | FvH4_1g08000 |
| malus_domestica | MD02G1084500.v1.1 MD15G1211900.v1.1 |
| prunus_persica | Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 Prupe.7G204900_v2.0.a1 |
| pyrus_communis | pycom02g06750 pycom15g18830 |
| rosa_chinensis | RchiOBHm_Chr2g0094041 |
| rosa_laevigata | RLG00000016448 |
| rosa_multiflora | Rmu_ssc0000469.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00147530 |
| rosa_rugosa | Rorug02G0040600 |
| rosa_samantha | Rh2AG088000 Rh2BG088200 Rh2CG090500 Rh2DG087200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3480 |
| Acc36I | ACCTGC | 2 cut(s) | 1871, 3480 |
| AccBSI | CCGCTC | 4 cut(s) | 507, 915, 2419, 2728 |
| AccI | GTMKAC | 2 cut(s) | 699, 1568 |
| AccII | CGCG | 3 cut(s) | 381, 1021, 2840 |
| AclI | AACGTT | 1 cut(s) | 2621 |
| AclWI | GGATC | 3 cut(s) | 203, 1219, 3016 |
| AcsI | RAATTY | 6 cut(s) | 414, 1595, 2029, 2324, 2381, 2553 |
| AcuI | CTGAAG | 2 cut(s) | 1173, 2139 |
| AdeI | CACNNNGTG | 1 cut(s) | 2144 |
| AfaI | GTAC | 6 cut(s) | 462, 646, 1061, 1288, 2134, 3181 |
| AfeI | AGCGCT | 1 cut(s) | 2063 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 320, 539, 620, 1208, 2422, 2423 |
| AflIII | ACRYGT | 3 cut(s) | 641, 939, 1470 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1456 |
| AjnI | CCWGG | 7 cut(s) | 10, 398, 532, 571, 1034, 1690, 2140 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1485, 1517 |
| Alw21I | GWGCWC | 2 cut(s) | 155, 3053 |
| Alw26I | GTCTC | 6 cut(s) | 98, 127, 483, 1687, 1747, 3428 |
| AlwI | GGATC | 3 cut(s) | 203, 1219, 3016 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 11, 568, 3572 |
| Ama87I | CYCGRG | 3 cut(s) | 136, 916, 2183 |
| Aor51HI | AGCGCT | 1 cut(s) | 2063 |
| AoxI | GGCC | 8 cut(s) | 38, 47, 396, 530, 1374, 1768, 2835, 3266 |
| ApeKI | GCWGC | 7 cut(s) | 71, 1016, 1219, 1526, 1997, 2219, 3142 |
| ApoI | RAATTY | 6 cut(s) | 414, 1595, 2029, 2324, 2381, 2553 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 461, 493 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 416, 1855, 2178, 2461, 2809, 2982 |
| AspLEI | GCGC | 5 cut(s) | 381, 968, 1021, 2064, 3274 |
| AspS9I | GGNCC | 9 cut(s) | 38, 60, 530, 830, 1199, 1374, 1426, 2563, 3497 |
| AsuC2I | CCSGG | 1 cut(s) | 2941 |
| AsuII | TTCGAA | 2 cut(s) | 664, 2883 |
| AvaI | CYCGRG | 3 cut(s) | 136, 916, 2183 |
| AvaII | GGWCC | 6 cut(s) | 60, 830, 1199, 1426, 2563, 3497 |
| AxyI | CCTNAGG | 1 cut(s) | 213 |
| BbsI | GAAGAC | 2 cut(s) | 1341, 2464 |
| Bbv12I | GWGCWC | 2 cut(s) | 155, 3053 |
| BbvI | GCAGC | 7 cut(s) | 58, 1028, 1206, 1538, 1984, 2206, 3129 |
| BceAI | ACGGC | 1 cut(s) | 1755 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2174, 2208, 3539, 3573 |
| BciT130I | CCWGG | 7 cut(s) | 12, 400, 534, 573, 1036, 1692, 2142 |
| BcnI | CCSGG | 1 cut(s) | 2941 |
| BcoDI | GTCTC | 6 cut(s) | 98, 127, 483, 1687, 1747, 3428 |
| BfmI | CTRYAG | 2 cut(s) | 1524, 3473 |
| BfoI | RGCGCY | 2 cut(s) | 969, 2065 |
| BfuAI | ACCTGC | 2 cut(s) | 1871, 3480 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 46 |
| BglII | AGATCT | 4 cut(s) | 86, 983, 1395, 3526 |
| BlpI | GCTNAGC | 1 cut(s) | 2437 |
| Bme1390I | CCNGG | 8 cut(s) | 12, 400, 534, 573, 1036, 1692, 2142, 2941 |
| Bme18I | GGWCC | 6 cut(s) | 60, 830, 1199, 1426, 2563, 3497 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1456 |
| BmeT110I | CYCGRG | 3 cut(s) | 136, 916, 2183 |
| BmgT120I | GGNCC | 9 cut(s) | 38, 60, 530, 830, 1199, 1374, 1426, 2563, 3497 |
| BmiI | GGNNCC | 4 cut(s) | 1317, 1428, 2308, 2565 |
| BmrFI | CCNGG | 8 cut(s) | 12, 400, 534, 573, 1036, 1692, 2142, 2941 |
| BmsI | GCATC | 4 cut(s) | 825, 2074, 2797, 3547 |
| BpiI | GAAGAC | 2 cut(s) | 1341, 2464 |
| BpmI | CTGGAG | 2 cut(s) | 1018, 1746 |
| Bpu10I | CCTNAGC | 1 cut(s) | 508 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2437 |
| Bpu14I | TTCGAA | 2 cut(s) | 664, 2883 |
| BpuEI | CTTGAG | 1 cut(s) | 2405 |
| BpuMI | CCSGG | 1 cut(s) | 2941 |
| Bsa29I | ATCGAT | 2 cut(s) | 757, 3549 |
| BsaAI | YACGTR | 1 cut(s) | 644 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1044, 1050, 1210, 2242 |
| BsaI | GGTCTC | 1 cut(s) | 483 |
| BsaWI | WCCGGW | 1 cut(s) | 1237 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1243, 1273, 2298, 2328, 2705, 2735 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 320, 539, 620, 1208, 2422, 2423 |
| Bse118I | RCCGGY | 1 cut(s) | 692 |
| Bse1I | ACTGG | 5 cut(s) | 1090, 1377, 2271, 2382, 3444 |
| Bse21I | CCTNAGG | 1 cut(s) | 213 |
| Bse3DI | GCAATG | 3 cut(s) | 1450, 2934, 3032 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1044, 1050, 1210, 2242 |
| BseBI | CCWGG | 7 cut(s) | 12, 400, 534, 573, 1036, 1692, 2142 |
| BseCI | ATCGAT | 2 cut(s) | 757, 3549 |
| BseGI | GGATG | 6 cut(s) | 115, 664, 1686, 1747, 3448, 3610 |
| BseJI | GATNNNNATC | 4 cut(s) | 1044, 1050, 1210, 2242 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 320, 539, 620, 1208, 2422, 2423 |
| BseMI | GCAATG | 3 cut(s) | 1450, 2934, 3032 |
| BseMII | CTCAG | 8 cut(s) | 522, 1013, 1126, 1599, 1679, 2280, 2451, 2502 |
| BseNI | ACTGG | 5 cut(s) | 1090, 1377, 2271, 2382, 3444 |
| BseRI | GAGGAG | 2 cut(s) | 163, 1765 |
| BseXI | GCAGC | 7 cut(s) | 58, 1028, 1206, 1538, 1984, 2206, 3129 |
| BsgI | GTGCAG | 1 cut(s) | 57 |
| Bsh1236I | CGCG | 3 cut(s) | 381, 1021, 2840 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3265 |
| BshFI | GGCC | 8 cut(s) | 40, 49, 398, 532, 1376, 1770, 2837, 3268 |
| BshVI | ATCGAT | 2 cut(s) | 757, 3549 |
| BsiEI | CGRYCG | 1 cut(s) | 3265 |
| BsiHKAI | GWGCWC | 2 cut(s) | 155, 3053 |
| BsiHKCI | CYCGRG | 3 cut(s) | 136, 916, 2183 |
| BsiSI | CCGG | 3 cut(s) | 693, 1238, 2940 |
| BslFI | GGGAC | 4 cut(s) | 887, 1412, 2161, 3218 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 320, 539, 620, 1208, 2422, 2423 |
| BsmAI | GTCTC | 6 cut(s) | 98, 127, 483, 1687, 1747, 3428 |
| BsmBI | CGTCTC | 1 cut(s) | 98 |
| BsmFI | GGGAC | 4 cut(s) | 887, 1412, 2161, 3218 |
| BsnI | GGCC | 8 cut(s) | 40, 49, 398, 532, 1376, 1770, 2837, 3268 |
| Bso31I | GGTCTC | 1 cut(s) | 483 |
| BsoBI | CYCGRG | 3 cut(s) | 136, 916, 2183 |
| Bsp119I | TTCGAA | 2 cut(s) | 664, 2883 |
| Bsp1286I | GDGCHC | 2 cut(s) | 155, 3053 |
| Bsp1407I | TGTACA | 2 cut(s) | 1059, 1286 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2437 |
| Bsp19I | CCATGG | 1 cut(s) | 3600 |
| BspANI | GGCC | 8 cut(s) | 40, 49, 398, 532, 1376, 1770, 2837, 3268 |
| BspCNI | CTCAG | 8 cut(s) | 521, 1012, 1125, 1600, 1678, 2279, 2450, 2501 |
| BspDI | ATCGAT | 2 cut(s) | 757, 3549 |
| BspFNI | CGCG | 3 cut(s) | 381, 1021, 2840 |
| BspHI | TCATGA | 3 cut(s) | 1138, 2100, 2170 |
| BspLI | GGNNCC | 4 cut(s) | 1317, 1428, 2308, 2565 |
| BspMAI | CTGCAG | 2 cut(s) | 1528, 3477 |
| BspMI | ACCTGC | 2 cut(s) | 1871, 3480 |
| BspPI | GGATC | 3 cut(s) | 203, 1219, 3016 |
| BspQI | GCTCTTC | 2 cut(s) | 1725, 1980 |
| BspT104I | TTCGAA | 2 cut(s) | 664, 2883 |
| BspTNI | GGTCTC | 1 cut(s) | 483 |
| BsrBI | CCGCTC | 4 cut(s) | 507, 915, 2419, 2728 |
| BsrDI | GCAATG | 3 cut(s) | 1450, 2934, 3032 |
| BsrFI | RCCGGY | 1 cut(s) | 692 |
| BsrGI | TGTACA | 2 cut(s) | 1059, 1286 |
| BsrI | ACTGG | 5 cut(s) | 1090, 1377, 2271, 2382, 3444 |
| BssAI | RCCGGY | 1 cut(s) | 692 |
| BssT1I | CCWWGG | 4 cut(s) | 556, 3285, 3583, 3600 |
| Bst2UI | CCWGG | 7 cut(s) | 12, 400, 534, 573, 1036, 1692, 2142 |
| Bst4CI | ACNGT | 1 cut(s) | 3488 |
| Bst6I | CTCTTC | 5 cut(s) | 345, 1064, 1725, 1980, 3125 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2901 |
| BstAUI | TGTACA | 2 cut(s) | 1059, 1286 |
| BstBAI | YACGTR | 1 cut(s) | 644 |
| BstBI | TTCGAA | 2 cut(s) | 664, 2883 |
| BstC8I | GCNNGC | 8 cut(s) | 726, 1282, 1328, 1520, 1524, 2688, 2835, 3270 |
| BstDSI | CCRYGG | 2 cut(s) | 1771, 3600 |
| BstF5I | GGATG | 6 cut(s) | 115, 664, 1686, 1747, 3448, 3610 |
| BstFNI | CGCG | 3 cut(s) | 381, 1021, 2840 |
| BstH2I | RGCGCY | 2 cut(s) | 969, 2065 |
| BstHHI | GCGC | 5 cut(s) | 381, 968, 1021, 2064, 3274 |
| BstMAI | GTCTC | 6 cut(s) | 98, 127, 483, 1687, 1747, 3428 |
| BstMCI | CGRYCG | 1 cut(s) | 3265 |
| BstNI | CCWGG | 7 cut(s) | 12, 400, 534, 573, 1036, 1692, 2142 |
| BstNSI | RCATGY | 3 cut(s) | 145, 943, 1474 |
| BstSCI | CCNGG | 8 cut(s) | 10, 398, 532, 571, 1034, 1690, 2140, 2939 |
| BstSFI | CTRYAG | 2 cut(s) | 1524, 3473 |
| BstUI | CGCG | 3 cut(s) | 381, 1021, 2840 |
| BstV1I | GCAGC | 7 cut(s) | 58, 1028, 1206, 1538, 1984, 2206, 3129 |
| BstV2I | GAAGAC | 2 cut(s) | 1341, 2464 |
| BstX2I | RGATCY | 4 cut(s) | 86, 983, 1395, 3526 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1269, 2453 |
| BstYI | RGATCY | 4 cut(s) | 86, 983, 1395, 3526 |
| Bsu15I | ATCGAT | 2 cut(s) | 757, 3549 |
| Bsu36I | CCTNAGG | 1 cut(s) | 213 |
| BsuRI | GGCC | 8 cut(s) | 40, 49, 398, 532, 1376, 1770, 2837, 3268 |
| BsuTUI | ATCGAT | 2 cut(s) | 757, 3549 |
| BtgI | CCRYGG | 2 cut(s) | 1771, 3600 |
| BtsCI | GGATG | 6 cut(s) | 115, 664, 1686, 1747, 3448, 3610 |
| BtsI | GCAGTG | 2 cut(s) | 963, 1849 |
| BtsIMutI | CAGTG | 7 cut(s) | 200, 314, 963, 1849, 2278, 2335, 3437 |
| BveI | ACCTGC | 2 cut(s) | 1871, 3480 |
| Cac8I | GCNNGC | 8 cut(s) | 726, 1282, 1328, 1520, 1524, 2688, 2835, 3270 |
| CaiI | CAGNNNCTG | 3 cut(s) | 11, 568, 3572 |
| CciI | TCATGA | 3 cut(s) | 1138, 2100, 2170 |
| CfoI | GCGC | 5 cut(s) | 381, 968, 1021, 2064, 3274 |
| Cfr10I | RCCGGY | 1 cut(s) | 692 |
| Cfr13I | GGNCC | 9 cut(s) | 38, 60, 530, 830, 1199, 1374, 1426, 2563, 3497 |
| ClaI | ATCGAT | 2 cut(s) | 757, 3549 |
| CseI | GACGC | 2 cut(s) | 251, 1524 |
| CsiI | ACCWGGT | 1 cut(s) | 2140 |
| Csp6I | GTAC | 6 cut(s) | 461, 645, 1060, 1287, 2133, 3180 |
| CviQI | GTAC | 6 cut(s) | 461, 645, 1060, 1287, 2133, 3180 |
| DraIII | CACNNNGTG | 1 cut(s) | 2144 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1456 |
| Eam1104I | CTCTTC | 5 cut(s) | 345, 1064, 1725, 1980, 3125 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1456 |
| EarI | CTCTTC | 5 cut(s) | 345, 1064, 1725, 1980, 3125 |
| EciI | GGCGGA | 1 cut(s) | 3258 |
| Eco130I | CCWWGG | 4 cut(s) | 556, 3285, 3583, 3600 |
| Eco147I | AGGCCT | 1 cut(s) | 49 |
| Eco31I | GGTCTC | 1 cut(s) | 483 |
| Eco32I | GATATC | 1 cut(s) | 2826 |
| Eco47I | GGWCC | 6 cut(s) | 60, 830, 1199, 1426, 2563, 3497 |
| Eco47III | AGCGCT | 1 cut(s) | 2063 |
| Eco57I | CTGAAG | 2 cut(s) | 1173, 2139 |
| Eco81I | CCTNAGG | 1 cut(s) | 213 |
| Eco88I | CYCGRG | 3 cut(s) | 136, 916, 2183 |
| EcoRI | GAATTC | 2 cut(s) | 1595, 2324 |
| EcoRII | CCWGG | 7 cut(s) | 10, 398, 532, 571, 1034, 1690, 2140 |
| EcoRV | GATATC | 1 cut(s) | 2826 |
| EcoT14I | CCWWGG | 4 cut(s) | 556, 3285, 3583, 3600 |
| EcoT22I | ATGCAT | 1 cut(s) | 3562 |
| ErhI | CCWWGG | 4 cut(s) | 556, 3285, 3583, 3600 |
| Esp3I | CGTCTC | 1 cut(s) | 98 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1150, 1182 |
| FaqI | GGGAC | 4 cut(s) | 887, 1412, 2161, 3218 |
| FauI | CCCGC | 2 cut(s) | 920, 2424 |
| FauNDI | CATATG | 3 cut(s) | 976, 2343, 2761 |
| FblI | GTMKAC | 2 cut(s) | 699, 1568 |
| FokI | GGATG | 6 cut(s) | 102, 671, 1673, 1754, 3455, 3617 |
| GlaI | GCGC | 5 cut(s) | 380, 967, 1020, 2063, 3273 |
| GsuI | CTGGAG | 2 cut(s) | 1018, 1746 |
| HaeII | RGCGCY | 2 cut(s) | 969, 2065 |
| HaeIII | GGCC | 8 cut(s) | 40, 49, 398, 532, 1376, 1770, 2837, 3268 |
| HapII | CCGG | 3 cut(s) | 693, 1238, 2940 |
| HgaI | GACGC | 2 cut(s) | 251, 1524 |
| HhaI | GCGC | 5 cut(s) | 381, 968, 1021, 2064, 3274 |
| Hin6I | GCGC | 5 cut(s) | 379, 966, 1019, 2062, 3272 |
| HinP1I | GCGC | 5 cut(s) | 379, 966, 1019, 2062, 3272 |
| HincII | GTYRAC | 4 cut(s) | 1123, 1798, 2005, 2946 |
| HindII | GTYRAC | 4 cut(s) | 1123, 1798, 2005, 2946 |
| HindIII | AAGCTT | 1 cut(s) | 426 |
| HpaI | GTTAAC | 1 cut(s) | 2005 |
| HpaII | CCGG | 3 cut(s) | 693, 1238, 2940 |
| HpyAV | CCTTC | 8 cut(s) | 388, 482, 843, 1755, 2134, 2591, 2710, 3086 |
| HpyCH4III | ACNGT | 1 cut(s) | 3488 |
| HpyCH4IV | ACGT | 5 cut(s) | 643, 1927, 2586, 2621, 2707 |
| HpySE526I | ACGT | 5 cut(s) | 643, 1927, 2586, 2621, 2707 |
| HspAI | GCGC | 5 cut(s) | 379, 966, 1019, 2062, 3272 |
| KspAI | GTTAAC | 1 cut(s) | 2005 |
| LguI | GCTCTTC | 2 cut(s) | 1725, 1980 |
| LmnI | GCTCC | 6 cut(s) | 150, 403, 2059, 2306, 2367, 3370 |
| Lsp1109I | GCAGC | 7 cut(s) | 58, 1028, 1206, 1538, 1984, 2206, 3129 |
| LweI | GCATC | 4 cut(s) | 825, 2074, 2797, 3547 |
| MabI | ACCWGGT | 1 cut(s) | 2140 |
| MaeII | ACGT | 5 cut(s) | 643, 1927, 2586, 2621, 2707 |
| MaeIII | GTNAC | 5 cut(s) | 178, 251, 929, 1363, 3425 |
| MbiI | CCGCTC | 4 cut(s) | 507, 915, 2419, 2728 |
| MfeI | CAATTG | 1 cut(s) | 765 |
| MflI | RGATCY | 4 cut(s) | 86, 983, 1395, 3526 |
| MhlI | GDGCHC | 2 cut(s) | 155, 3053 |
| MlyI | GAGTC | 6 cut(s) | 559, 926, 2258, 2327, 2921, 3455 |
| MmeI | TCCRAC | 2 cut(s) | 87, 1187 |
| Mph1103I | ATGCAT | 1 cut(s) | 3562 |
| MroXI | GAANNNNTTC | 6 cut(s) | 416, 1855, 2178, 2461, 2809, 2982 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2451, 2753 |
| MspI | CCGG | 3 cut(s) | 693, 1238, 2940 |
| MspR9I | CCNGG | 8 cut(s) | 12, 400, 534, 573, 1036, 1692, 2142, 2941 |
| MunI | CAATTG | 1 cut(s) | 765 |
| MvaI | CCWGG | 7 cut(s) | 12, 400, 534, 573, 1036, 1692, 2142 |
| MvnI | CGCG | 3 cut(s) | 381, 1021, 2840 |
| NciI | CCSGG | 1 cut(s) | 2941 |
| NcoI | CCATGG | 1 cut(s) | 3600 |
| NdeI | CATATG | 3 cut(s) | 976, 2343, 2761 |
| NlaIV | GGNNCC | 4 cut(s) | 1317, 1428, 2308, 2565 |
| NmeAIII | GCCGAG | 1 cut(s) | 1988 |
| NmuCI | GTSAC | 2 cut(s) | 251, 929 |
| NsiI | ATGCAT | 1 cut(s) | 3562 |
| NspI | RCATGY | 3 cut(s) | 145, 943, 1474 |
| NspV | TTCGAA | 2 cut(s) | 664, 2883 |
| PaeR7I | CTCGAG | 1 cut(s) | 916 |
| PagI | TCATGA | 3 cut(s) | 1138, 2100, 2170 |
| PaqCI | CACCTGC | 1 cut(s) | 3480 |
| PceI | AGGCCT | 1 cut(s) | 49 |
| PciI | ACATGT | 2 cut(s) | 939, 1470 |
| PciSI | GCTCTTC | 2 cut(s) | 1725, 1980 |
| PdmI | GAANNNNTTC | 6 cut(s) | 416, 1855, 2178, 2461, 2809, 2982 |
| PleI | GAGTC | 6 cut(s) | 559, 926, 2258, 2326, 2920, 3454 |
| PpsI | GAGTC | 6 cut(s) | 559, 926, 2258, 2326, 2920, 3454 |
| Ppu21I | YACGTR | 1 cut(s) | 644 |
| PscI | ACATGT | 2 cut(s) | 939, 1470 |
| Psp1406I | AACGTT | 1 cut(s) | 2621 |
| Psp6I | CCWGG | 7 cut(s) | 10, 398, 532, 571, 1034, 1690, 2140 |
| PspGI | CCWGG | 7 cut(s) | 10, 398, 532, 571, 1034, 1690, 2140 |
| PspN4I | GGNNCC | 4 cut(s) | 1317, 1428, 2308, 2565 |
| PspPI | GGNCC | 9 cut(s) | 38, 60, 530, 830, 1199, 1374, 1426, 2563, 3497 |
| PstI | CTGCAG | 2 cut(s) | 1528, 3477 |
| PstNI | CAGNNNCTG | 3 cut(s) | 11, 568, 3572 |
| PsuI | RGATCY | 4 cut(s) | 86, 983, 1395, 3526 |
| RsaI | GTAC | 6 cut(s) | 462, 646, 1061, 1288, 2134, 3181 |
| RsaNI | GTAC | 6 cut(s) | 461, 645, 1060, 1287, 2133, 3180 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2451, 2753 |
| SapI | GCTCTTC | 2 cut(s) | 1725, 1980 |
| Sau96I | GGNCC | 9 cut(s) | 38, 60, 530, 830, 1199, 1374, 1426, 2563, 3497 |
| SchI | GAGTC | 6 cut(s) | 559, 926, 2258, 2327, 2921, 3455 |
| ScrFI | CCNGG | 8 cut(s) | 12, 400, 534, 573, 1036, 1692, 2142, 2941 |
| SduI | GDGCHC | 2 cut(s) | 155, 3053 |
| SexAI | ACCWGGT | 1 cut(s) | 2140 |
| SfaNI | GCATC | 4 cut(s) | 825, 2074, 2797, 3547 |
| SfcI | CTRYAG | 2 cut(s) | 1524, 3473 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 46 |
| Sfr274I | CTCGAG | 1 cut(s) | 916 |
| SfuI | TTCGAA | 2 cut(s) | 664, 2883 |
| SinI | GGWCC | 6 cut(s) | 60, 830, 1199, 1426, 2563, 3497 |
| SlaI | CTCGAG | 1 cut(s) | 916 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2451, 2753 |
| SmlI | CTYRAG | 2 cut(s) | 916, 2420 |
| SmoI | CTYRAG | 2 cut(s) | 916, 2420 |
| SseBI | AGGCCT | 1 cut(s) | 49 |
| SspI | AATATT | 2 cut(s) | 1135, 2178 |
| StuI | AGGCCT | 1 cut(s) | 49 |
| StyD4I | CCNGG | 8 cut(s) | 10, 398, 532, 571, 1034, 1690, 2140, 2939 |
| StyI | CCWWGG | 4 cut(s) | 556, 3285, 3583, 3600 |
| TaaI | ACNGT | 1 cut(s) | 3488 |
| TaiI | ACGT | 5 cut(s) | 646, 1930, 2589, 2624, 2710 |
| TaqII | GACCGA | 2 cut(s) | 1335, 3251 |
| TatI | WGTACW | 2 cut(s) | 1059, 1286 |
| TauI | GCSGC | 5 cut(s) | 227, 1225, 2731, 2788, 2840 |
| TscAI | CASTG | 7 cut(s) | 200, 321, 963, 1849, 2278, 2335, 3444 |
| TseFI | GTSAC | 2 cut(s) | 251, 929 |
| TseI | GCWGC | 7 cut(s) | 71, 1016, 1219, 1526, 1997, 2219, 3142 |
| Tsp45I | GTSAC | 2 cut(s) | 251, 929 |
| TspGWI | ACGGA | 4 cut(s) | 1044, 1446, 3068, 3310 |
| TspRI | CASTG | 7 cut(s) | 200, 321, 963, 1849, 2278, 2335, 3444 |
| VpaK11BI | GGWCC | 6 cut(s) | 60, 830, 1199, 1426, 2563, 3497 |
| XapI | RAATTY | 6 cut(s) | 414, 1595, 2029, 2324, 2381, 2553 |
| XceI | RCATGY | 3 cut(s) | 145, 943, 1474 |
| XhoI | CTCGAG | 1 cut(s) | 916 |
| XmiI | GTMKAC | 2 cut(s) | 699, 1568 |
| XmnI | GAANNNNTTC | 6 cut(s) | 416, 1855, 2178, 2461, 2809, 2982 |
| Zsp2I | ATGCAT | 1 cut(s) | 3562 |