FvH4_1g08000

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0005061
Physical Location & Seq
Forward (+)
4224051 .. 4234663
10613 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g08000.t1

Sequence Viewer

Length: 3918 bp
ATGGCGACTTCTAGCAAGTTTGATCTCTCTTCTGGTAGCCCGGACAGACCATTATATACCAGTGGGCAGCGTGGGTCCCACATGGCTGCTTCATTGGAAAGACCTGGCAGCTTTCGTGAGAGCATGGAAAATCCAATTTTATCTTCACTTCCAAGCATGTCAAGAAGCACATCTGCAATAGTTCAAGGAGATGTGACAAACTTCCTCCAATGCGTGCGCTTCGACCCAAAAACGGTGGCCGCAGAGCACAAGTCTAACCGACAAGGGGACTTGAAAAGACTAGTGAATGCTGCTTTTAGCATTTCACCTGATGATTCTCCATCTAGTTCTGTGAAAGGCAAGTTGCTACCACCCCCACTACCGGAGGATGTAAAACGAGTCAGGGCTAGTCTGCGTGAAAGCTGTGGTAAAGCCAGGGACCGTGTAAAGACTTTCAGTGAAGCATTATCGGTATTCAATAACGTTTTTCCTAGTGTACCATCAAAGAAGAGATCAAGAACAGAAAGTTTTTCAAATGAACGGTCTGGTGTGGTGTTACCGGGTGATCGGTCAATGATGGGACCAAGCATGGGTAAGATCGGTATTCAGAATCATGCTGTGGCAGGTGGTTTTGAAATTGATCAGCAAAAGTCAGAAGAAAGGACAAAAAATTCTGTACCGAACAAACGCACACGCACTTCTTTGGTGGATGTGAGGATGGATGTGCGAAATAATACTCTTGTCCGACCATCGGGGGTAGTAGAAAGAGAAAGGGAAATGATGAGGCTTGCAAGTAGTGGTGCAGTTCAAGGAGAGGAACGTAATCTATCCATTGGTGTTGACGGTTGGGAAAAATCAAAAATGAAGAAAAAGCGTTCTGGGATAAAACCAGATGTTTCTCTGATGGTGACTAGTAAACCAATTGATGGCTACCGTGAAACCAAACAGGGGATGCAGCAAAGGCCTGTCAATGATGTCCGTTCAAGGTTAAACAATGACTCCCATGGGTTCAGGCCTGGAGTCGCCAATGGAGCTGTTGGAGTTGGAAAGTCGGACGGAATCAAACAACCAACTGGCCCAGCCTTCCGTTCATCCATCCCTAAGACTGAACCAGACAACCCTTCCCTTATCAATGATAAGAGAGATCGTCCTATGGGTTCAGATAAGGAAAGAGGGAACCAGAGAGTTGTTAACAAATCAAATGCTCGTGACGACTTTAATTCTGCTAGTCCTACCTCTAGTACAAAGATGAATGCATCTGTTCGGGCTCCGCGATCAGGCTCAGCTGTTACACCCAAGTTGTCCCCAGTTGTTCATCGAGCAACTGTACCTAATGATTGGGAGATATCTCAATGTACAAACAAGCCCCCTGCTGTTGTTGGACCTAACAATCGCAAACGCATGACATCAGCACGATCTTCATCCCCGCCTGTTGCTCAATGGGCTGGCCAGAGACCACAAAAGATGTCCCGCACTGCTAGACGATCAAATTTCAATCCTATTGTTTCAAGTAATGAGGAAACCCCTGTTATTGATAGTGCATCGGACATGACTGGTAGTGACATCGGTCAAGGATTCGCCAGACGCTTACCTGGAAGTTCTCCTCAGCAAGTTAAGTTAAAAGGTGAACCTTTGTCCTCAGCAGCACTATCAGAGAGTGAGGAGTCGGGTGCCGCTGAGGTCAAATCCAGAGACAAAGGCAAAAAATCTGATGAGATAGATGAGAAACCTGGACAGAACATTCAAATTCAGAAGGTGCCTAGTCTGGTCTTGCCATCAAGAAAACAGAAGTCGGCTGCTGGGGAAGACCTTGGAGATGGTGTTCGGAGGCAGGGGAGAACAGGACGAGGTTTTGCTTCGACAAGGTCTATTGTGCCGATGACTGTTGAAAAGATGGGAAATGTTGGTACAGCTAAACAGCTGAGAAGTTCCAGACTTGGTGTAGATAAGAGTGAAAGCAAGGCAGGCCGTCCACCAACTAGGAGGCTTTCTGATCGAAAGGCCTATACACGTCAAAAGCATACAGCAATTAACCCCGCAGCAGATTTTCTCGTTGGGTCAGATGATGGACATGAAGAGCTAATGACTGCTGCAAAAGCCGCTGTTGATTCTGCTCGTTCCTGCTCCAGCTCATTTTGGATGAAGATGGAGCCATTTTTTCGTTTTGTGTCTGATGCGGACATTAATTACCTAAAGGGAAACATTGAATCTAGTGTGACCACTCCAGCTGAAGTCCCTTGTAGTTTAGATGGTAACCTTACAGTCCACTATGGACTGGGTTCGAATGAATTTGAACCAAGGAGTGGAGAGTTTCGTTCCGAACAATCAGTGCCAGGCACTGGGGATCACTCTGAAATTCCCCTCTGTCAGAGACTCATAGCGGCATTAATTTCAGAAGAGGATACTAGTAGTGGAAATGAAGATCCTGTGTTTGATGCATATGGAGTTGAATCTGATCTGGATGCAGAGGTTGAATCAAATGGTCTGAGTTATCAATCTCAAGTCAACTTTCAGTTTGCTGGAAATGCTGCTTCAAATGGTTATAGGATTACTGGAAGGCCGGAACATGATGAACCTGAAGGTGGAATCCGCATTCCAAACAGAACAATTAGTTCAAACTTTGGTCTTTCCCAAAATGGTGTACTTCCGGATGAAGCATTTTTTTCTGGTTTTGCCTGTTCAGAATTCCAGTATGGTAACATGCACATAAATGAAAAACTTCTACTGGAGATTCAGAGTATTGGAATCTACCCAGAACTACTGCCTGACATGACACAGACGACCGATGACGAAATCAGTGGGGAAATTAGGAAATTAGAGGAAAAGTATCATGAACAGGTCTCCAACAAGAAAGGGTTGCTGGATGGACTGTTTAGGTCTGCCTCAGAAAAGAAAGAACGCCAAATAAAGGAGCTAGAACAGCGTGCGCTTGACAAACTCATTGGAATGGCTTATGAGAAGTATTTGGCTCCAAATGCCACCGGGGGAAAGAGTTCCAGTAATAAAATGGCCAAGCAAGCTGCCTTAGCATTTGTCAGACGGACACTGGACCGATGCCATAAATTTGAAGAGACAGGGACAAGCTGCTTCAGTGAACCGGTATATAGGGATATACTTCTTTCTATGGCTTCCAATGTGAATGGCACACGACAAGCAGAGGCTATTGCAGATGGTGAATCCACCAAATCATATGCCTCCACTCGTTGTTTGGAAGGTAGTCTTTCAGCTTCCATGAGCTCCAAGCAACACCATCCACAGTTTAGTCAGAATATGGATAATACCATTACTTCTTCAGATGTGCTTCCACCTTTAAATCATTTACCCGAACAAAGTACGGGTAGAGAAGAAACATGGACAAACAGGGTGAAGAAGAGGGAATTATCCCTTGATGATGTTGGTAGTACTATTGGAACTTCAAATTCCCCATCAGGTATTGGAAATTCTCTATCTAGCAGTGCAAAAGGAAAGAGGAGTGAGAGGGATAGAGATGGAAAAGGGCACAACCGGGAGGTGTTATCAAGAAATGGAACTGCTAAAATTGGTAGGCCAGCAGTGTCCAATGTTAAGGGTGAAAGAAAATCAAAAACTAAGCCTAAGCAGAAAACGACTCAGCTATCTGTTTCAGTAAATGGCCCTGTTGGTAAGATATCAGAACATCCCAAACCAGCATTGCCTTCTGTACCGAAGTCTGGTGAAATGACTACCAGTCGGAATCCCAAGCAAAAGGATCATCATCCTGTAGATGCACTGGAAGACCCTATTGACTTGTCTCACCTGCAATTACCAGGAATGGATGTGTTAGGTGCTGATGATATTGATGGTCAAACACAGGATTTAGGTTCATGGTTGAATATCGATGATGATGGTTTACAAGATCATGATTTCATGGGTCTTGAAATTCCAATGGATGACCTTTCAGACTTAAATATGATGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ada3

Protein Analysis

1306

Amino Acids

142.06

Weight (kDa)

8.95

Isoelectric Point (pI)

51.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ada3 PF10198 895 - 1006 3.8e-06 Histone acetyltransferases subunit 3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 593, 3762
Acc36I ACCTGC 2 cut(s) 593, 3762
AccB1I GGYRCC 2 cut(s) 1649, 1735
AccB7I CCANNNNNTGG 3 cut(s) 905, 2282, 2318
AccII CGCG 1 cut(s) 1252
AccIII TCCGGA 1 cut(s) 2626
AclI AACGTT 1 cut(s) 462
AclWI GGATC 3 cut(s) 2331, 2396, 3714
AcoI YGGCCR 3 cut(s) 237, 1426, 2988
AcuI CTGAAG 4 cut(s) 2229, 2577, 3052, 3255
AflIII ACRYGT 1 cut(s) 1988
AgeI ACCGGT 1 cut(s) 3076
AhdI GACNNNNNGTC 1 cut(s) 3684
AhlI ACTAGT 3 cut(s) 280, 890, 2384
AjiI CACGTC 1 cut(s) 1991
AjnI CCWGG 7 cut(s) 103, 413, 994, 1570, 1708, 2311, 3763
AjuI GAANNNNNNNTTGG 2 cut(s) 127, 159
AloI GAACNNNNNNTCC 2 cut(s) 1785, 1817
Alw21I GWGCWC 2 cut(s) 249, 3218
Alw26I GTCTC 6 cut(s) 1426, 1665, 2344, 2824, 3044, 3753
AlwI GGATC 3 cut(s) 2331, 2396, 3714
AlwNI CAGNNNCTG 1 cut(s) 2318
Aor13HI TCCGGA 1 cut(s) 2626
ArsI GACNNNNNNTTYG 2 cut(s) 506, 538
AseI ATTAAT 2 cut(s) 2163, 2366
AsiGI ACCGGT 1 cut(s) 3076
Asp700I GAANNNNTTC 2 cut(s) 2697, 2971
AspLEI GCGC 2 cut(s) 219, 2908
AspS9I GGNCC 7 cut(s) 75, 418, 560, 1055, 1361, 3028, 3611
AsuC2I CCSGG 4 cut(s) 41, 540, 2962, 3485
AsuHPI GGTGA 9 cut(s) 297, 554, 898, 1616, 3164, 3355, 3560, 3683, 3743
AsuII TTCGAA 1 cut(s) 2261
AvaII GGWCC 5 cut(s) 75, 418, 560, 1361, 3028
BaeGI GKGCMC 1 cut(s) 3480
BalI TGGCCA 2 cut(s) 1428, 2990
BanI GGYRCC 2 cut(s) 1649, 1735
BanII GRGCYC 2 cut(s) 1249, 3218
BauI CACGAG 1 cut(s) 1185
BbsI GAAGAC 2 cut(s) 1791, 3738
Bbv12I GWGCWC 2 cut(s) 249, 3218
BbvCI CCTCAGC 3 cut(s) 1584, 1618, 1656
BceAI ACGGC 1 cut(s) 1932
BciT130I CCWGG 7 cut(s) 105, 415, 996, 1572, 1710, 2313, 3765
BciVI GTATCC 1 cut(s) 2374
BclI TGATCA 1 cut(s) 619
BcnI CCSGG 4 cut(s) 41, 540, 2962, 3485
BcoDI GTCTC 6 cut(s) 1426, 1665, 2344, 2824, 3044, 3753
BcuI ACTAGT 3 cut(s) 280, 890, 2384
BfmI CTRYAG 1 cut(s) 3717
BfuAI ACCTGC 2 cut(s) 593, 3762
BfuI GTATCC 1 cut(s) 2374
BlpI GCTNAGC 1 cut(s) 1261
BmcAI AGTACT 1 cut(s) 3382
Bme18I GGWCC 5 cut(s) 75, 418, 560, 1361, 3028
BmeRI GACNNNNNGTC 1 cut(s) 3684
BmgBI CACGTC 1 cut(s) 1991
BmgT120I GGNCC 7 cut(s) 75, 418, 560, 1055, 1361, 3028, 3611
BmrI ACTGGG 3 cut(s) 1280, 2264, 2328
BmsI GCATC 8 cut(s) 921, 1244, 1529, 2143, 2404, 2431, 3023, 3712
BmuI ACTGGG 3 cut(s) 1280, 2264, 2328
BoxI GACNNNNGTC 1 cut(s) 1545
BpiI GAAGAC 2 cut(s) 1791, 3738
BpmI CTGGAG 4 cut(s) 1017, 2089, 2187, 2726
Bpu10I CCTNAGC 5 cut(s) 1584, 1618, 1656, 3004, 3573
Bpu1102I GCTNAGC 1 cut(s) 1261
Bpu14I TTCGAA 1 cut(s) 2261
BpuEI CTTGAG 1 cut(s) 2463
BpuMI CCSGG 4 cut(s) 41, 540, 2962, 3485
Bsa29I ATCGAT 1 cut(s) 3834
BsaBI GATNNNNATC 2 cut(s) 1399, 3711
BsaI GGTCTC 2 cut(s) 1426, 2824
BsaJI CCNNGG 5 cut(s) 414, 982, 1789, 2276, 2961
BsaWI WCCGGW 3 cut(s) 361, 2626, 3076
BsaXI ACNNNNNCTCC 4 cut(s) 962, 992, 1785, 1815
Bse118I RCCGGY 1 cut(s) 3076
Bse3DI GCAATG 1 cut(s) 3647
Bse8I GATNNNNATC 2 cut(s) 1399, 3711
BseAI TCCGGA 1 cut(s) 2626
BseBI CCWGG 7 cut(s) 105, 415, 996, 1572, 1710, 2313, 3765
BseCI ATCGAT 1 cut(s) 3834
BseDI CCNNGG 5 cut(s) 414, 982, 1789, 2276, 2961
BseJI GATNNNNATC 2 cut(s) 1399, 3711
BseMI GCAATG 1 cut(s) 3647
BseMII CTCAG 8 cut(s) 1275, 1598, 1632, 1647, 1892, 2456, 2877, 3602
BseRI GAGGAG 3 cut(s) 1572, 1655, 3463
BseSI GKGCMC 1 cut(s) 3480
BseYI CCCAGC 2 cut(s) 1057, 1778
BsgI GTGCAG 1 cut(s) 801
Bsh1236I CGCG 1 cut(s) 1252
Bsh1285I CGRYCG 1 cut(s) 2763
BshNI GGYRCC 2 cut(s) 1649, 1735
BshTI ACCGGT 1 cut(s) 3076
BshVI ATCGAT 1 cut(s) 3834
BsiEI CGRYCG 1 cut(s) 2763
BsiHKAI GWGCWC 2 cut(s) 249, 3218
BsiSI CCGG 8 cut(s) 41, 362, 539, 2540, 2627, 2961, 3077, 3484
BslFI GGGAC 8 cut(s) 61, 281, 431, 573, 1267, 1432, 2198, 3070
BsmAI GTCTC 6 cut(s) 1426, 1665, 2344, 2824, 3044, 3753
BsmFI GGGAC 8 cut(s) 61, 281, 431, 573, 1267, 1432, 2198, 3070
BsmI GAATGC 3 cut(s) 292, 1237, 2571
Bso31I GGTCTC 2 cut(s) 1426, 2824
Bsp119I TTCGAA 1 cut(s) 2261
Bsp1286I GDGCHC 4 cut(s) 249, 1249, 3218, 3480
Bsp13I TCCGGA 1 cut(s) 2626
Bsp1407I TGTACA 1 cut(s) 1334
Bsp1720I GCTNAGC 1 cut(s) 1261
Bsp19I CCATGG 1 cut(s) 982
BspCNI CTCAG 8 cut(s) 1274, 1597, 1631, 1648, 1893, 2457, 2876, 3601
BspDI ATCGAT 1 cut(s) 3834
BspEI TCCGGA 1 cut(s) 2626
BspFNI CGCG 1 cut(s) 1252
BspHI TCATGA 2 cut(s) 2809, 3856
BspMI ACCTGC 2 cut(s) 593, 3762
BspPI GGATC 3 cut(s) 2331, 2396, 3714
BspQI GCTCTTC 1 cut(s) 2049
BspT104I TTCGAA 1 cut(s) 2261
BspT107I GGYRCC 2 cut(s) 1649, 1735
BspTNI GGTCTC 2 cut(s) 1426, 2824
BsrDI GCAATG 1 cut(s) 3647
BsrFI RCCGGY 1 cut(s) 3076
BsrGI TGTACA 1 cut(s) 1334
BssAI RCCGGY 1 cut(s) 3076
BssECI CCNNGG 5 cut(s) 414, 982, 1789, 2276, 2961
BssSI CACGAG 1 cut(s) 1185
BssT1I CCWWGG 3 cut(s) 982, 1789, 2276
Bst2BI CACGAG 1 cut(s) 1185
Bst2UI CCWGG 7 cut(s) 105, 415, 996, 1572, 1710, 2313, 3765
Bst6I CTCTTC 6 cut(s) 34, 482, 2049, 2370, 3042, 3344
BstAUI TGTACA 1 cut(s) 1334
BstBI TTCGAA 1 cut(s) 2261
BstC8I GCNNGC 7 cut(s) 215, 768, 1426, 1945, 2904, 2997, 3528
BstDSI CCRYGG 1 cut(s) 982
BstEII GGTNACC 1 cut(s) 2231
BstFNI CGCG 1 cut(s) 1252
BstHHI GCGC 2 cut(s) 219, 2908
BstMAI GTCTC 6 cut(s) 1426, 1665, 2344, 2824, 3044, 3753
BstMCI CGRYCG 1 cut(s) 2763
BstNI CCWGG 7 cut(s) 105, 415, 996, 1572, 1710, 2313, 3765
BstNSI RCATGY 2 cut(s) 160, 2683
BstPAI GACNNNNGTC 1 cut(s) 1545
BstPI GGTNACC 1 cut(s) 2231
BstSFI CTRYAG 1 cut(s) 3717
BstSLI GKGCMC 1 cut(s) 3480
BstUI CGCG 1 cut(s) 1252
BstV2I GAAGAC 2 cut(s) 1791, 3738
BstX2I RGATCY 1 cut(s) 2401
BstYI RGATCY 1 cut(s) 2401
Bsu15I ATCGAT 1 cut(s) 3834
BsuI GTATCC 1 cut(s) 2374
BsuTUI ATCGAT 1 cut(s) 3834
BtgI CCRYGG 1 cut(s) 982
BtrI CACGTC 1 cut(s) 1991
BtsI GCAGTG 3 cut(s) 1452, 3439, 3537
BveI ACCTGC 2 cut(s) 593, 3762
Cac8I GCNNGC 7 cut(s) 215, 768, 1426, 1945, 2904, 2997, 3528
CaiI CAGNNNCTG 1 cut(s) 2318
CciI TCATGA 2 cut(s) 2809, 3856
CfoI GCGC 2 cut(s) 219, 2908
Cfr10I RCCGGY 1 cut(s) 3076
Cfr13I GGNCC 7 cut(s) 75, 418, 560, 1055, 1361, 3028, 3611
ClaI ATCGAT 1 cut(s) 3834
CseI GACGC 1 cut(s) 1572
CspAI ACCGGT 1 cut(s) 3076
CspCI CAANNNNNGTGG 2 cut(s) 216, 251
DraI TTTAAA 1 cut(s) 3291
DriI GACNNNNNGTC 1 cut(s) 3684
EaeI YGGCCR 3 cut(s) 237, 1426, 2988
Eam1104I CTCTTC 6 cut(s) 34, 482, 2049, 2370, 3042, 3344
Eam1105I GACNNNNNGTC 1 cut(s) 3684
EarI CTCTTC 6 cut(s) 34, 482, 2049, 2370, 3042, 3344
Ecl136II GAGCTC 1 cut(s) 3216
Eco130I CCWWGG 3 cut(s) 982, 1789, 2276
Eco147I AGGCCT 3 cut(s) 943, 994, 1982
Eco24I GRGCYC 2 cut(s) 1249, 3218
Eco31I GGTCTC 2 cut(s) 1426, 2824
Eco32I GATATC 2 cut(s) 1326, 3627
Eco47I GGWCC 5 cut(s) 75, 418, 560, 1361, 3028
Eco53kI GAGCTC 1 cut(s) 3216
Eco57I CTGAAG 4 cut(s) 2229, 2577, 3052, 3255
Eco91I GGTNACC 1 cut(s) 2231
EcoICRI GAGCTC 1 cut(s) 3216
EcoO109I RGGNCCY 1 cut(s) 75
EcoO65I GGTNACC 1 cut(s) 2231
EcoRI GAATTC 1 cut(s) 2663
EcoRII CCWGG 7 cut(s) 103, 413, 994, 1570, 1708, 2311, 3763
EcoRV GATATC 2 cut(s) 1326, 3627
EcoT14I CCWWGG 3 cut(s) 982, 1789, 2276
EcoT22I ATGCAT 2 cut(s) 1237, 2419
EcoT38I GRGCYC 2 cut(s) 1249, 3218
ErhI CCWWGG 3 cut(s) 982, 1789, 2276
FalI AAGNNNNNCTT 2 cut(s) 3183, 3215
FaqI GGGAC 8 cut(s) 61, 281, 431, 573, 1267, 1432, 2198, 3070
FauI CCCGC 3 cut(s) 1413, 1457, 2023
FauNDI CATATG 2 cut(s) 2419, 3169
FbaI TGATCA 1 cut(s) 619
FriOI GRGCYC 2 cut(s) 1249, 3218
GlaI GCGC 2 cut(s) 218, 2907
GsaI CCCAGC 2 cut(s) 1061, 1782
GsuI CTGGAG 4 cut(s) 1017, 2089, 2187, 2726
HapII CCGG 8 cut(s) 41, 362, 539, 2540, 2627, 2961, 3077, 3484
HgaI GACGC 1 cut(s) 1572
HhaI GCGC 2 cut(s) 219, 2908
Hin6I GCGC 2 cut(s) 217, 2906
HinP1I GCGC 2 cut(s) 217, 2906
HincII GTYRAC 3 cut(s) 820, 1171, 2485
HindII GTYRAC 3 cut(s) 820, 1171, 2485
HpaI GTTAAC 1 cut(s) 1171
HpaII CCGG 8 cut(s) 41, 362, 539, 2540, 2627, 2961, 3077, 3484
HphI GGTGA 9 cut(s) 297, 554, 898, 1616, 3164, 3355, 3560, 3683, 3743
HpyAV CCTTC 7 cut(s) 1072, 1110, 1726, 2529, 2552, 3185, 3663
HpyCH4IV ACGT 3 cut(s) 462, 799, 1990
HpySE526I ACGT 3 cut(s) 462, 799, 1990
HspAI GCGC 2 cut(s) 217, 2906
KflI GGGWCCC 1 cut(s) 75
Kpn2I TCCGGA 1 cut(s) 2626
Ksp22I TGATCA 1 cut(s) 619
KspAI GTTAAC 1 cut(s) 1171
LguI GCTCTTC 1 cut(s) 2049
LmnI GCTCC 7 cut(s) 1010, 1252, 2108, 2128, 2890, 2953, 3221
LweI GCATC 8 cut(s) 921, 1244, 1529, 2143, 2404, 2431, 3023, 3712
MaeII ACGT 3 cut(s) 462, 799, 1990
MaeIII GTNAC 9 cut(s) 193, 534, 886, 1187, 1267, 1538, 2194, 2231, 2675
MfeI CAATTG 1 cut(s) 900
MflI RGATCY 1 cut(s) 2401
MhlI GDGCHC 4 cut(s) 249, 1249, 3218, 3480
MlsI TGGCCA 2 cut(s) 1428, 2990
MluNI TGGCCA 2 cut(s) 1428, 2990
MlyI GAGTC 6 cut(s) 387, 971, 1008, 1652, 2346, 3580
MmeI TCCRAC 7 cut(s) 748, 997, 1003, 1011, 1339, 2847, 3668
Mox20I TGGCCA 2 cut(s) 1428, 2990
Mph1103I ATGCAT 2 cut(s) 1237, 2419
MroI TCCGGA 1 cut(s) 2626
MroXI GAANNNNTTC 2 cut(s) 2697, 2971
MscI TGGCCA 2 cut(s) 1428, 2990
MslI CAYNNNNRTG 2 cut(s) 2688, 2924
Msp20I TGGCCA 2 cut(s) 1428, 2990
MspA1I CMGCKG 5 cut(s) 1265, 1655, 1900, 2081, 2207
MspI CCGG 8 cut(s) 41, 362, 539, 2540, 2627, 2961, 3077, 3484
MunI CAATTG 1 cut(s) 900
Mva1269I GAATGC 3 cut(s) 292, 1237, 2571
MvaI CCWGG 7 cut(s) 105, 415, 996, 1572, 1710, 2313, 3765
MvnI CGCG 1 cut(s) 1252
NciI CCSGG 4 cut(s) 41, 540, 2962, 3485
NcoI CCATGG 1 cut(s) 982
NdeI CATATG 2 cut(s) 2419, 3169
NmuCI GTSAC 5 cut(s) 193, 886, 1187, 1538, 2194
NsiI ATGCAT 2 cut(s) 1237, 2419
NspI RCATGY 2 cut(s) 160, 2683
NspV TTCGAA 1 cut(s) 2261
PagI TCATGA 2 cut(s) 2809, 3856
PaqCI CACCTGC 2 cut(s) 593, 3762
PceI AGGCCT 3 cut(s) 943, 994, 1982
PciSI GCTCTTC 1 cut(s) 2049
PcsI WCGNNNNNNNCGW 1 cut(s) 1249
PctI GAATGC 3 cut(s) 292, 1237, 2571
PdmI GAANNNNTTC 2 cut(s) 2697, 2971
PflFI GACNNNGTC 1 cut(s) 1843
PflMI CCANNNNNTGG 3 cut(s) 905, 2282, 2318
PinAI ACCGGT 1 cut(s) 3076
PleI GAGTC 6 cut(s) 386, 971, 1007, 1651, 2346, 3580
PpsI GAGTC 6 cut(s) 386, 971, 1007, 1651, 2346, 3580
PpuMI RGGWCCY 1 cut(s) 75
PshAI GACNNNNGTC 1 cut(s) 1545
PshBI ATTAAT 2 cut(s) 2163, 2366
Psp124BI GAGCTC 1 cut(s) 3218
Psp1406I AACGTT 1 cut(s) 462
Psp5II RGGWCCY 1 cut(s) 75
Psp6I CCWGG 7 cut(s) 103, 413, 994, 1570, 1708, 2311, 3763
PspEI GGTNACC 1 cut(s) 2231
PspFI CCCAGC 2 cut(s) 1057, 1778
PspGI CCWGG 7 cut(s) 103, 413, 994, 1570, 1708, 2311, 3763
PspPI GGNCC 7 cut(s) 75, 418, 560, 1055, 1361, 3028, 3611
PspPPI RGGWCCY 1 cut(s) 75
PstNI CAGNNNCTG 1 cut(s) 2318
PsuI RGATCY 1 cut(s) 2401
PsyI GACNNNGTC 1 cut(s) 1843
PvuII CAGCTG 3 cut(s) 1265, 1900, 2207
RseI CAYNNNNRTG 2 cut(s) 2688, 2924
SacI GAGCTC 1 cut(s) 3218
SapI GCTCTTC 1 cut(s) 2049
Sau96I GGNCC 7 cut(s) 75, 418, 560, 1055, 1361, 3028, 3611
ScaI AGTACT 1 cut(s) 3382
SchI GAGTC 6 cut(s) 387, 971, 1008, 1652, 2346, 3580
SduI GDGCHC 4 cut(s) 249, 1249, 3218, 3480
SfaNI GCATC 8 cut(s) 921, 1244, 1529, 2143, 2404, 2431, 3023, 3712
SfcI CTRYAG 1 cut(s) 3717
SfuI TTCGAA 1 cut(s) 2261
SinI GGWCC 5 cut(s) 75, 418, 560, 1361, 3028
SmiMI CAYNNNNRTG 2 cut(s) 2688, 2924
SmlI CTYRAG 1 cut(s) 2478
SmoI CTYRAG 1 cut(s) 2478
SpeI ACTAGT 3 cut(s) 280, 890, 2384
SseBI AGGCCT 3 cut(s) 943, 994, 1982
SstI GAGCTC 1 cut(s) 3218
StuI AGGCCT 3 cut(s) 943, 994, 1982
StyI CCWWGG 3 cut(s) 982, 1789, 2276
TaiI ACGT 3 cut(s) 465, 802, 1993
TaqI TCGA 6 cut(s) 222, 1297, 1838, 1975, 2261, 3834
TaqII GACCGA 4 cut(s) 537, 1535, 2777, 3045
TatI WGTACW 4 cut(s) 1220, 1334, 2620, 3380
TauI GCSGC 4 cut(s) 242, 1655, 2081, 2363
TseFI GTSAC 5 cut(s) 193, 886, 1187, 1538, 2194
Tsp45I GTSAC 5 cut(s) 193, 886, 1187, 1538, 2194
TspGWI ACGGA 4 cut(s) 947, 1050, 1055, 3034
Tth111I GACNNNGTC 1 cut(s) 1843
Van91I CCANNNNNTGG 3 cut(s) 905, 2282, 2318
VpaK11BI GGWCC 5 cut(s) 75, 418, 560, 1361, 3028
VspI ATTAAT 2 cut(s) 2163, 2366
XceI RCATGY 2 cut(s) 160, 2683
XcmI CCANNNNNNNNNTGG 2 cut(s) 2983, 3184
XmnI GAANNNNTTC 2 cut(s) 2697, 2971
ZrmI AGTACT 1 cut(s) 3382
Zsp2I ATGCAT 2 cut(s) 1237, 2419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.