Rh2DG087200

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0005061
Physical Location & Seq
Forward (+)
6759390 .. 6768385
8996 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG087200.1

Sequence Viewer

Length: 3924 bp
ATGGCAACTTCTAGCAAGTTTGATCTCTCTTCTGGTAGCCCAGATAGACCATTATATACCAGTGGGCAGCGTGGGTCCCACATGGCTGCTTCGCTCGAAAGACCTGGTAGCTTTCGCGAGAGCATGGAAAATCCAATTTTGTCTTCACTTCCAAACATGTCAAGAAGCACGTCTGCAATAGCCCAAGGAGATGTGACAAACTTCTTACAATGCTTGCGCTTCGACCCAAAACAGGTGGCCGCAGAGCACAAGTCCAACCGACAAGGGGACTTGAAAAGACTTGTGAATGTTGCTCTTAGCATTTCACCTGATGAATCTCCGTCTAGTTCTGTGAAAGGTAAGTTGCTACCAGCCCCACTACCGGAGGATGTAAAACGAGTGAAGGCTGGTCTCCGTGAAAGCATTGTTAAAGCCAGGGAACGCATAAAGATTTTCAATGAAGCATTATCTGTATTCAACAAGGTTTTTCCCAGTGTACCATCAAAGAAGAGATCAAGAACTGAAAGTTTTTCTAATGAACGGTCTGGTGTGGTGTTACCAACTGATCGGTCAATGATGGTGCCAAGCATGGGTAAGATTGGTTTGCAGAGTCATGCTGTGGCAGGTGGTTTTGAACTTGAGCAGCAAAAGTCAGAAGAAAGGACAAAAAATTCTGTCCCGAACAAACGCACTCGTACTTCTTTGGTGGATGTGAGGATGGATGTGCGAAGTAATACTCTTGTACGACCATCGGGGGCTGTAGAAAGAGAAAGGGAAATGATGAGGCTTGCAAGTAGTGGTGCGGTTCAGGGAGAGGAACGTAATCTATCTATCAGTGTTGATGGTTGGGAAAAATCAAAAATGAAGAAAAAGCGTTCTGGGATAAAGCCAGATGTTTCTCCAATGGTGACCAGTAAACCAATTGATGGCTACCGTGAAACTAAACAGGGGATGCAGCAAAGGCCTGTTAATGATGTCCGTTCAAGGTTGAATAATGACTCCCATGGGTTCAGGCCTGGAGTCACTAATGGAGCAGTTGGAGTTGGAAAGTCGGACGGAATCACACAACCAACTGGCCCAGCCTTCCGTTCATCCATCCCTAAGACTGAACCAGACAACCCTTCCCTTATCAATGATAAGAGAGATCGTCCTATTGGTTCAGATAAGGAAAGGGTGAACCAGAGAGCTGTTAATAAATCAAATGCTCGTGATGATTTTAATTCTGCTAGTCCCACCTCTAGTACAAAGATGAATGCATCTGTTCGGGCTCCGCGATCAGGCTCAGCTGTTGCACCCAAGTTGTCCCCAGTTGTTCATCGAGCAACTGTTCCTAATGATTGGGAGATATCTCAATGTACAAACAAGCCACCGGCTGTTGTTGGAGCTAACAATCGCAAACGTATGACATCAGCACGATCTTCATCCCCACCTGTTGCTCAATGGGCTGGCCAGAGACCACAGAAGATGTCCCGCACTGCTAGACGATCAAATTTCAATCCAATTGTTTCAGGTAATGAGGAAAACCCTGCTATTGATAGTGCATCGGACGTCACTGGTAGTGACATCGGGCAAGGATTCGCCAGACGCTTACCCGGAAGTTCTCCTCAGCAAGTTAAGTTAAAAAGTGAACCTTTGTCTTCAGCTGCACTATCAGAGAGTGAGGAGTCGGGAGTTGCTGAGGTCAAATCCAGAGACAAAGGCAAAAAATCCGATGAGATAGATGAGAAACCTGGACAGAATATTCAAATTCAAAAGGTGCCTAGTCTGGTCTTGCCATCAAGAAAACATAAGTCGGCTCCCGGGGAAGACCTTGGAGATGGTGTTCGGAGGCAGGGGAGAACAGGACGAGGTTTTGCTTCGACAAGGTCTCTTGTCCCAATGTCTGTTGAGAAGATGGGAAATGTTGGTACTGCTAAACAGCTGAGAAGTTCCAGACTTGGTGTAGATAAGAGTGAAAGCAAGGCAGGCCGTCCACCAACTAGGAGACTTTCTGATCGAAAGGCCTATACACGTCAAAAGCATACAGCAATTAATACAGCACCAGATTTTCTCGTTGGGTCAGATGATGGACATGAAGAGCTAATGACTGCTGCGAAAGCTGTCATTGATTCTGCTCGTTCCTTCTCCAGCTCATTTTGGAAGCAGATGGAGCCATTTTTTGGTTTTTTATCTGATGCAGACATAGATTACCTAAAGGGAAACATCGAAGCCAGTGTGACGACTCCAGCCGAAGTCCCATGTAGTTTAGATGGTAACCTTACTGGCCATTATGGACTTGGGTCAAGAGAATTTGAACCAAAGAGTGAAGAGTTCCATTCCGAACAATTAATGCCAGGCACTGGGGATTCTGAAATTCCTCTCTGTCAGAGACTCATAGCAGCATTAATTTCAGAAGAGGATTCCATTAGTGGAAATGAAGATCCTGTGTTTGATGCATATGGAGTTGAATCTGATCTGGATGCAGAGGTAGAATCAAATGGTCTGAATTATCAATCTCAAGTTAACTTTCAGTTTGCTGGGAAATCTGCTTCAAATGGTTATAGGATTACTGGGAGGCCGGAACATGATGAGCTTGAAGGTGGAATCCACATCCCAAACAGAACAATTAGTTCAAACTTTGGTCATTCGCAAAATGGTTTACTTCCGGATCAAGCATTTTTTTCTGGTTTCGCCTGTTCAGAATTCCAGTATGGTAACATGCACATAAATGAAAAACTTCTACTGGAGATTCAGAGTATTGGGATTTACCCAGAGCTACTGCCTGACATGACACAGACGGGGGATGACGAAATCAGTGGGGAAATTAGGAAATTAGAGGAGAAGTATCATGAACAGGTCTCCAACAAGAAAGGGCTGCTAGATGGACTGTTTAGGTCTGCCTCAGAAAAGAAAGAACGCCAAGCAAAGGATCTAGAACAGCGCGCCCTTGATAAACTCGTTGGAATGGCTTATGAGAAGTATTTGGCTTGTTGCGGCCCAAATGCCACTGGGGGAAAGAGTTCCAGTAATAAAATGGCCAAGCAAGCTGCCTTAGCATTTGTCAAACGGACACTGGACCGATGCCATAAATATGAAGAGACCGGAACAAGCTGCTTCAGTGAACTGATATATAGGGATATACTTCTTTCTGTGGCTTCCGATGTTAATGGCGCACGAAAAGCAGAGGCTATTGCAGACGGTGAATCCACCAAATCATATGCCTCCACTCGCTGTTTGGAAGGTAGTGTTTCAGCTTCTGTAGGCTCCAAACAACACCATTCACAGTTTAGTCAGAATATGGATAATAATGTTACTTCTTCAGATGTGCTTCCACCTTTAAATCACTTGCCTGAACAAACTACTGGTAGAGAAGAAACATGGACAAACAGGGTGAAGAAGAGGGAATTGTCCCTTGATGATGTTGGTAGTACTATTGGAACTTCAAATTCCCCATCAGGTATTGGAAATTCTCTATCTAGCAGTGCAAAAGGAAAGAGGAGTGAGAGGGATAGAGATGGCAAAGGGCATAACAGGGAGGTCTTATCTAGAAATGGAACTGCTAAAATTGGTCGGCCAGCAGTGTCCAATGTTAAGGGTGAAAGAAAATCAAAAACGAAGCCCAAGCAGAAAACGACTCAGCTATCTGTTTCAGTAAATGGCCCTGTTGGTAAGATATCAGAACAACCCAAACCAGCATTGCCTTCTGTACCAAAGTCTGGCGAAATGACTACCAGTCGGAATCCCAAGCAAAAGGATCAGTTTCCATTAGATGCAATGGAAGACCCTATCGACTTGTCTCACCTGCAATTACCAGGAATGGATGTGTTAGGTGCTGATGATATGGATGGTCAAGCACAGGATTTAGGTTCATGGTTGAATATCGATGATGATGGTTTACAAGATCATGATTTCATGGGTCTTGAAATTCCAATGGATGACCTTTCAGACTTAAATATGATGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ada3

Protein Analysis

1307

Amino Acids

142.25

Weight (kDa)

8.84

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ada3 PF10198 894 - 1008 1.6e-06 Histone acetyltransferases subunit 3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 593, 3768
AatII GACGTC 1 cut(s) 1530
Acc36I ACCTGC 2 cut(s) 593, 3768
AccB1I GGYRCC 2 cut(s) 559, 1735
AccB7I CCANNNNNTGG 4 cut(s) 905, 2138, 2318, 3674
AccII CGCG 3 cut(s) 117, 1252, 2901
AccIII TCCGGA 1 cut(s) 2623
AciI CCGC 5 cut(s) 240, 782, 1250, 1450, 2952
AclWI GGATC 4 cut(s) 2393, 2634, 2895, 3720
AcoI YGGCCR 5 cut(s) 237, 1426, 2242, 2994, 3530
AcsI RAATTY 9 cut(s) 649, 1468, 1725, 2267, 2331, 2660, 3403, 3424, 3882
AcuI CTGAAG 3 cut(s) 1602, 3058, 3261
AcyI GRCGYC 1 cut(s) 1527
AfaI GTAC 8 cut(s) 477, 676, 723, 1222, 1336, 1888, 3388, 3666
AflIII ACRYGT 2 cut(s) 156, 1988
AhdI GACNNNNNGTC 1 cut(s) 3690
AjiI CACGTC 2 cut(s) 171, 1991
AjnI CCWGG 6 cut(s) 103, 413, 994, 1708, 2311, 3769
AjuI GAANNNNNNNTTGG 2 cut(s) 127, 159
AloI GAACNNNNNNTCC 2 cut(s) 1785, 1817
Alw21I GWGCWC 1 cut(s) 249
Alw26I GTCTC 9 cut(s) 395, 1426, 1665, 1851, 1957, 2341, 2821, 3050, 3759
AlwI GGATC 4 cut(s) 2393, 2634, 2895, 3720
AlwNI CAGNNNCTG 2 cut(s) 2318, 3215
Ama87I CYCGRG 1 cut(s) 1778
Aor13HI TCCGGA 1 cut(s) 2623
ApoI RAATTY 9 cut(s) 649, 1468, 1725, 2267, 2331, 2660, 3403, 3424, 3882
AseI ATTAAT 3 cut(s) 2010, 2306, 2363
Asp700I GAANNNNTTC 2 cut(s) 2694, 2977
AspLEI GCGC 4 cut(s) 219, 2901, 2903, 3131
AspS9I GGNCC 5 cut(s) 75, 1055, 2954, 3034, 3617
AsuC2I CCSGG 3 cut(s) 1572, 1779, 1780
AsuHPI GGTGA 7 cut(s) 297, 898, 1165, 3170, 3361, 3566, 3749
AvaI CYCGRG 1 cut(s) 1778
AvaII GGWCC 2 cut(s) 75, 3034
BalI TGGCCA 3 cut(s) 1428, 2244, 2996
BanI GGYRCC 2 cut(s) 559, 1735
BanII GRGCYC 1 cut(s) 1249
BauI CACGAG 1 cut(s) 1185
BbsI GAAGAC 4 cut(s) 135, 1608, 1791, 3744
Bbv12I GWGCWC 1 cut(s) 249
BbvCI CCTCAGC 2 cut(s) 1584, 1656
BceAI ACGGC 1 cut(s) 1932
BciT130I CCWGG 6 cut(s) 105, 415, 996, 1710, 2313, 3771
BcnI CCSGG 3 cut(s) 1572, 1779, 1780
BcoDI GTCTC 9 cut(s) 395, 1426, 1665, 1851, 1957, 2341, 2821, 3050, 3759
BfmI CTRYAG 2 cut(s) 738, 3216
BfuAI ACCTGC 2 cut(s) 593, 3768
BlpI GCTNAGC 1 cut(s) 1261
BmcAI AGTACT 1 cut(s) 3388
Bme1390I CCNGG 9 cut(s) 105, 415, 996, 1572, 1710, 1779, 1780, 2313, 3771
Bme18I GGWCC 2 cut(s) 75, 3034
BmeRI GACNNNNNGTC 1 cut(s) 3690
BmeT110I CYCGRG 1 cut(s) 1778
BmgBI CACGTC 2 cut(s) 171, 1991
BmgT120I GGNCC 5 cut(s) 75, 1055, 2954, 3034, 3617
BmiI GGNNCC 8 cut(s) 76, 77, 561, 1248, 1737, 1776, 2130, 3223
BmrFI CCNGG 9 cut(s) 105, 415, 996, 1572, 1710, 1779, 1780, 2313, 3771
BmrI ACTGGG 5 cut(s) 465, 1280, 2328, 2538, 2976
BmsI GCATC 8 cut(s) 921, 1244, 1529, 2143, 2401, 2428, 3029, 3718
BmuI ACTGGG 5 cut(s) 465, 1280, 2328, 2538, 2976
BoxI GACNNNNGTC 1 cut(s) 2257
BpiI GAAGAC 4 cut(s) 135, 1608, 1791, 3744
BpmI CTGGAG 4 cut(s) 1017, 2089, 2187, 2723
Bpu10I CCTNAGC 3 cut(s) 1584, 1656, 3010
Bpu1102I GCTNAGC 1 cut(s) 1261
BpuEI CTTGAG 2 cut(s) 638, 2460
BpuMI CCSGG 3 cut(s) 1572, 1779, 1780
Bsa29I ATCGAT 1 cut(s) 3840
BsaBI GATNNNNATC 1 cut(s) 1399
BsaHI GRCGYC 1 cut(s) 1527
BsaI GGTCTC 5 cut(s) 395, 1426, 1851, 2821, 3050
BsaJI CCNNGG 6 cut(s) 184, 414, 982, 1778, 1779, 1789
BsaWI WCCGGW 3 cut(s) 361, 2623, 3059
BsaXI ACNNNNNCTCC 2 cut(s) 1785, 1815
Bse118I RCCGGY 1 cut(s) 1348
Bse3DI GCAATG 2 cut(s) 3653, 3738
Bse8I GATNNNNATC 1 cut(s) 1399
BseAI TCCGGA 1 cut(s) 2623
BseBI CCWGG 6 cut(s) 105, 415, 996, 1710, 2313, 3771
BseCI ATCGAT 1 cut(s) 3840
BseDI CCNNGG 6 cut(s) 184, 414, 982, 1778, 1779, 1789
BseJI GATNNNNATC 1 cut(s) 1399
BseMI GCAATG 2 cut(s) 3653, 3738
BseMII CTCAG 6 cut(s) 1275, 1598, 1647, 1892, 2874, 3608
BsePI GCGCGC 1 cut(s) 2899
BseRI GAGGAG 4 cut(s) 1572, 1655, 2810, 3469
BseYI CCCAGC 2 cut(s) 1057, 2495
BsgI GTGCAG 1 cut(s) 1608
Bsh1236I CGCG 3 cut(s) 117, 1252, 2901
BshNI GGYRCC 2 cut(s) 559, 1735
BshVI ATCGAT 1 cut(s) 3840
BsiHKAI GWGCWC 1 cut(s) 249
BsiHKCI CYCGRG 1 cut(s) 1778
BsiSI CCGG 7 cut(s) 362, 1349, 1572, 1779, 2537, 2624, 3060
BslFI GGGAC 9 cut(s) 61, 281, 641, 1194, 1267, 1432, 1838, 2198, 3352
BsmAI GTCTC 9 cut(s) 395, 1426, 1665, 1851, 1957, 2341, 2821, 3050, 3759
BsmFI GGGAC 9 cut(s) 61, 281, 641, 1194, 1267, 1432, 1838, 2198, 3352
BsmI GAATGC 1 cut(s) 1237
Bso31I GGTCTC 5 cut(s) 395, 1426, 1851, 2821, 3050
BsoBI CYCGRG 1 cut(s) 1778
Bsp1286I GDGCHC 2 cut(s) 249, 1249
Bsp13I TCCGGA 1 cut(s) 2623
Bsp1407I TGTACA 1 cut(s) 1334
Bsp1720I GCTNAGC 1 cut(s) 1261
Bsp19I CCATGG 1 cut(s) 982
Bsp68I TCGCGA 1 cut(s) 117
BspACI CCGC 5 cut(s) 240, 782, 1250, 1450, 2952
BspCNI CTCAG 6 cut(s) 1274, 1597, 1648, 1893, 2873, 3607
BspDI ATCGAT 1 cut(s) 3840
BspEI TCCGGA 1 cut(s) 2623
BspFNI CGCG 3 cut(s) 117, 1252, 2901
BspHI TCATGA 2 cut(s) 2806, 3862
BspLI GGNNCC 8 cut(s) 76, 77, 561, 1248, 1737, 1776, 2130, 3223
BspMI ACCTGC 2 cut(s) 593, 3768
BspPI GGATC 4 cut(s) 2393, 2634, 2895, 3720
BspQI GCTCTTC 1 cut(s) 2049
BspT107I GGYRCC 2 cut(s) 559, 1735
BspTNI GGTCTC 5 cut(s) 395, 1426, 1851, 2821, 3050
BsrDI GCAATG 2 cut(s) 3653, 3738
BsrFI RCCGGY 1 cut(s) 1348
BsrGI TGTACA 1 cut(s) 1334
BssAI RCCGGY 1 cut(s) 1348
BssECI CCNNGG 6 cut(s) 184, 414, 982, 1778, 1779, 1789
BssHII GCGCGC 1 cut(s) 2899
BssNI GRCGYC 1 cut(s) 1527
BssSI CACGAG 1 cut(s) 1185
BssT1I CCWWGG 3 cut(s) 184, 982, 1789
Bst2BI CACGAG 1 cut(s) 1185
Bst2UI CCWGG 6 cut(s) 105, 415, 996, 1710, 2313, 3771
Bst4CI ACNGT 6 cut(s) 522, 914, 1306, 2847, 3158, 3243
Bst6I CTCTTC 7 cut(s) 34, 482, 2049, 2280, 2367, 3048, 3350
BstACI GRCGYC 1 cut(s) 1527
BstAUI TGTACA 1 cut(s) 1334
BstC8I GCNNGC 7 cut(s) 215, 768, 1426, 1945, 2901, 3003, 3534
BstDEI CTNAG 9 cut(s) 296, 1080, 1261, 1584, 1656, 1901, 2860, 3010, 3594
BstDSI CCRYGG 1 cut(s) 982
BstEII GGTNACC 2 cut(s) 886, 2231
BstFNI CGCG 3 cut(s) 117, 1252, 2901
BstHHI GCGC 4 cut(s) 219, 2901, 2903, 3131
BstMAI GTCTC 9 cut(s) 395, 1426, 1665, 1851, 1957, 2341, 2821, 3050, 3759
BstMWI GCNNNNNNNGC 8 cut(s) 940, 1421, 1944, 2075, 2128, 3002, 3011, 3137
BstNI CCWGG 6 cut(s) 105, 415, 996, 1710, 2313, 3771
BstNSI RCATGY 2 cut(s) 160, 2680
BstPAI GACNNNNGTC 1 cut(s) 2257
BstPI GGTNACC 2 cut(s) 886, 2231
BstSCI CCNGG 9 cut(s) 103, 413, 994, 1570, 1708, 1777, 1778, 2311, 3769
BstSFI CTRYAG 2 cut(s) 738, 3216
BstUI CGCG 3 cut(s) 117, 1252, 2901
BstV2I GAAGAC 4 cut(s) 135, 1608, 1791, 3744
BstX2I RGATCY 2 cut(s) 2398, 2887
BstYI RGATCY 2 cut(s) 2398, 2887
Bsu15I ATCGAT 1 cut(s) 3840
BsuTUI ATCGAT 1 cut(s) 3840
BtgI CCRYGG 1 cut(s) 982
BtrI CACGTC 2 cut(s) 171, 1991
BtsI GCAGTG 3 cut(s) 1452, 3445, 3543
BtuMI TCGCGA 1 cut(s) 117
BveI ACCTGC 2 cut(s) 593, 3768
Cac8I GCNNGC 7 cut(s) 215, 768, 1426, 1945, 2901, 3003, 3534
CaiI CAGNNNCTG 2 cut(s) 2318, 3215
CciI TCATGA 2 cut(s) 2806, 3862
CfoI GCGC 4 cut(s) 219, 2901, 2903, 3131
Cfr10I RCCGGY 1 cut(s) 1348
Cfr13I GGNCC 5 cut(s) 75, 1055, 2954, 3034, 3617
Cfr9I CCCGGG 1 cut(s) 1778
ClaI ATCGAT 1 cut(s) 3840
CseI GACGC 1 cut(s) 1572
CsiI ACCWGGT 1 cut(s) 103
Csp6I GTAC 8 cut(s) 476, 675, 722, 1221, 1335, 1887, 3387, 3665
CspCI CAANNNNNGTGG 2 cut(s) 216, 251
CviQI GTAC 8 cut(s) 476, 675, 722, 1221, 1335, 1887, 3387, 3665
DdeI CTNAG 9 cut(s) 296, 1080, 1261, 1584, 1656, 1901, 2860, 3010, 3594
DraI TTTAAA 1 cut(s) 3297
DriI GACNNNNNGTC 1 cut(s) 3690
EaeI YGGCCR 5 cut(s) 237, 1426, 2242, 2994, 3530
Eam1104I CTCTTC 7 cut(s) 34, 482, 2049, 2280, 2367, 3048, 3350
Eam1105I GACNNNNNGTC 1 cut(s) 3690
EarI CTCTTC 7 cut(s) 34, 482, 2049, 2280, 2367, 3048, 3350
Eco130I CCWWGG 3 cut(s) 184, 982, 1789
Eco147I AGGCCT 3 cut(s) 943, 994, 1982
Eco24I GRGCYC 1 cut(s) 1249
Eco31I GGTCTC 5 cut(s) 395, 1426, 1851, 2821, 3050
Eco32I GATATC 2 cut(s) 1326, 3633
Eco47I GGWCC 2 cut(s) 75, 3034
Eco57I CTGAAG 3 cut(s) 1602, 3058, 3261
Eco88I CYCGRG 1 cut(s) 1778
Eco91I GGTNACC 2 cut(s) 886, 2231
EcoO109I RGGNCCY 1 cut(s) 75
EcoO65I GGTNACC 2 cut(s) 886, 2231
EcoRI GAATTC 1 cut(s) 2660
EcoRII CCWGG 6 cut(s) 103, 413, 994, 1708, 2311, 3769
EcoRV GATATC 2 cut(s) 1326, 3633
EcoT14I CCWWGG 3 cut(s) 184, 982, 1789
EcoT22I ATGCAT 2 cut(s) 1237, 2416
EcoT38I GRGCYC 1 cut(s) 1249
ErhI CCWWGG 3 cut(s) 184, 982, 1789
FalI AAGNNNNNCTT 2 cut(s) 1594, 1626
FaqI GGGAC 9 cut(s) 61, 281, 641, 1194, 1267, 1432, 1838, 2198, 3352
FauI CCCGC 1 cut(s) 1457
FauNDI CATATG 2 cut(s) 2416, 3175
FriOI GRGCYC 1 cut(s) 1249
GlaI GCGC 4 cut(s) 218, 2900, 2902, 3130
GsaI CCCAGC 2 cut(s) 1061, 2499
GsuI CTGGAG 4 cut(s) 1017, 2089, 2187, 2723
HapII CCGG 7 cut(s) 362, 1349, 1572, 1779, 2537, 2624, 3060
HgaI GACGC 1 cut(s) 1572
HhaI GCGC 4 cut(s) 219, 2901, 2903, 3131
Hin1I GRCGYC 1 cut(s) 1527
Hin6I GCGC 4 cut(s) 217, 2899, 2901, 3129
HinP1I GCGC 4 cut(s) 217, 2899, 2901, 3129
HincII GTYRAC 1 cut(s) 2482
HindII GTYRAC 1 cut(s) 2482
HpaI GTTAAC 1 cut(s) 2482
HpaII CCGG 7 cut(s) 362, 1349, 1572, 1779, 2537, 2624, 3060
HphI GGTGA 7 cut(s) 297, 898, 1165, 3170, 3361, 3566, 3749
Hpy166II GTNNAC 9 cut(s) 476, 896, 1156, 1607, 1952, 2482, 2618, 3080, 3854
Hpy8I GTNNAC 9 cut(s) 476, 896, 1156, 1607, 1952, 2482, 2618, 3080, 3854
HpyAV CCTTC 7 cut(s) 376, 1072, 1110, 2110, 2549, 3191, 3669
HpyCH4III ACNGT 6 cut(s) 522, 914, 1306, 2847, 3158, 3243
HpyCH4IV ACGT 5 cut(s) 170, 799, 1378, 1527, 1990
HpyF10VI GCNNNNNNNGC 8 cut(s) 940, 1421, 1944, 2075, 2128, 3002, 3011, 3137
HpyF3I CTNAG 9 cut(s) 296, 1080, 1261, 1584, 1656, 1901, 2860, 3010, 3594
HpySE526I ACGT 5 cut(s) 170, 799, 1378, 1527, 1990
Hsp92I GRCGYC 1 cut(s) 1527
HspAI GCGC 4 cut(s) 217, 2899, 2901, 3129
KflI GGGWCCC 1 cut(s) 75
Kpn2I TCCGGA 1 cut(s) 2623
KspAI GTTAAC 1 cut(s) 2482
LguI GCTCTTC 1 cut(s) 2049
LmnI GCTCC 6 cut(s) 1010, 1252, 1361, 1780, 2128, 3227
LweI GCATC 8 cut(s) 921, 1244, 1529, 2143, 2401, 2428, 3029, 3718
MabI ACCWGGT 1 cut(s) 103
MaeII ACGT 5 cut(s) 170, 799, 1378, 1527, 1990
MfeI CAATTG 2 cut(s) 900, 1479
MflI RGATCY 2 cut(s) 2398, 2887
MhlI GDGCHC 2 cut(s) 249, 1249
MlsI TGGCCA 3 cut(s) 1428, 2244, 2996
MluNI TGGCCA 3 cut(s) 1428, 2244, 2996
MlyI GAGTC 7 cut(s) 598, 971, 1008, 1652, 2194, 2343, 3586
MmeI TCCRAC 8 cut(s) 279, 997, 1003, 1011, 1339, 2844, 2899, 3674
Mox20I TGGCCA 3 cut(s) 1428, 2244, 2996
Mph1103I ATGCAT 2 cut(s) 1237, 2416
MroI TCCGGA 1 cut(s) 2623
MroXI GAANNNNTTC 2 cut(s) 2694, 2977
MscI TGGCCA 3 cut(s) 1428, 2244, 2996
MslI CAYNNNNRTG 2 cut(s) 2685, 3048
Msp20I TGGCCA 3 cut(s) 1428, 2244, 2996
MspA1I CMGCKG 3 cut(s) 1265, 1622, 1900
MspI CCGG 7 cut(s) 362, 1349, 1572, 1779, 2537, 2624, 3060
MspR9I CCNGG 9 cut(s) 105, 415, 996, 1572, 1710, 1779, 1780, 2313, 3771
MunI CAATTG 2 cut(s) 900, 1479
Mva1269I GAATGC 1 cut(s) 1237
MvaI CCWGG 6 cut(s) 105, 415, 996, 1710, 2313, 3771
MvnI CGCG 3 cut(s) 117, 1252, 2901
MwoI GCNNNNNNNGC 8 cut(s) 940, 1421, 1944, 2075, 2128, 3002, 3011, 3137
NciI CCSGG 3 cut(s) 1572, 1779, 1780
NcoI CCATGG 1 cut(s) 982
NdeI CATATG 2 cut(s) 2416, 3175
NlaIV GGNNCC 8 cut(s) 76, 77, 561, 1248, 1737, 1776, 2130, 3223
NmuCI GTSAC 6 cut(s) 193, 886, 1000, 1528, 1538, 2194
NruI TCGCGA 1 cut(s) 117
NsiI ATGCAT 2 cut(s) 1237, 2416
NspI RCATGY 2 cut(s) 160, 2680
PagI TCATGA 2 cut(s) 2806, 3862
PaqCI CACCTGC 2 cut(s) 593, 3768
PauI GCGCGC 1 cut(s) 2899
PceI AGGCCT 3 cut(s) 943, 994, 1982
PciI ACATGT 1 cut(s) 156
PciSI GCTCTTC 1 cut(s) 2049
PcsI WCGNNNNNNNCGW 1 cut(s) 1249
PctI GAATGC 1 cut(s) 1237
PdmI GAANNNNTTC 2 cut(s) 2694, 2977
PflFI GACNNNGTC 1 cut(s) 1843
PflMI CCANNNNNTGG 4 cut(s) 905, 2138, 2318, 3674
PleI GAGTC 7 cut(s) 597, 971, 1007, 1651, 2194, 2343, 3586
PpsI GAGTC 7 cut(s) 597, 971, 1007, 1651, 2194, 2343, 3586
PpuMI RGGWCCY 1 cut(s) 75
PscI ACATGT 1 cut(s) 156
PshAI GACNNNNGTC 1 cut(s) 2257
PshBI ATTAAT 3 cut(s) 2010, 2306, 2363
Psp5II RGGWCCY 1 cut(s) 75
Psp6I CCWGG 6 cut(s) 103, 413, 994, 1708, 2311, 3769
PspEI GGTNACC 2 cut(s) 886, 2231
PspFI CCCAGC 2 cut(s) 1057, 2495
PspGI CCWGG 6 cut(s) 103, 413, 994, 1708, 2311, 3769
PspN4I GGNNCC 8 cut(s) 76, 77, 561, 1248, 1737, 1776, 2130, 3223
PspPI GGNCC 5 cut(s) 75, 1055, 2954, 3034, 3617
PspPPI RGGWCCY 1 cut(s) 75
PstNI CAGNNNCTG 2 cut(s) 2318, 3215
PsuI RGATCY 2 cut(s) 2398, 2887
PsyI GACNNNGTC 1 cut(s) 1843
PteI GCGCGC 1 cut(s) 2899
PvuII CAGCTG 3 cut(s) 1265, 1622, 1900
RruI TCGCGA 1 cut(s) 117
RsaI GTAC 8 cut(s) 477, 676, 723, 1222, 1336, 1888, 3388, 3666
RsaNI GTAC 8 cut(s) 476, 675, 722, 1221, 1335, 1887, 3387, 3665
RseI CAYNNNNRTG 2 cut(s) 2685, 3048
SapI GCTCTTC 1 cut(s) 2049
Sau96I GGNCC 5 cut(s) 75, 1055, 2954, 3034, 3617
ScaI AGTACT 1 cut(s) 3388
SchI GAGTC 7 cut(s) 598, 971, 1008, 1652, 2194, 2343, 3586
ScrFI CCNGG 9 cut(s) 105, 415, 996, 1572, 1710, 1779, 1780, 2313, 3771
SduI GDGCHC 2 cut(s) 249, 1249
SexAI ACCWGGT 1 cut(s) 103
SfaNI GCATC 8 cut(s) 921, 1244, 1529, 2143, 2401, 2428, 3029, 3718
SfcI CTRYAG 2 cut(s) 738, 3216
SinI GGWCC 2 cut(s) 75, 3034
SmaI CCCGGG 1 cut(s) 1780
SmiMI CAYNNNNRTG 2 cut(s) 2685, 3048
SmlI CTYRAG 2 cut(s) 617, 2475
SmoI CTYRAG 2 cut(s) 617, 2475
SseBI AGGCCT 3 cut(s) 943, 994, 1982
SsiI CCGC 5 cut(s) 240, 782, 1250, 1450, 2952
SspI AATATT 1 cut(s) 1720
StuI AGGCCT 3 cut(s) 943, 994, 1982
StyD4I CCNGG 9 cut(s) 103, 413, 994, 1570, 1708, 1777, 1778, 2311, 3769
StyI CCWWGG 3 cut(s) 184, 982, 1789
TaaI ACNGT 6 cut(s) 522, 914, 1306, 2847, 3158, 3243
TaiI ACGT 5 cut(s) 173, 802, 1381, 1530, 1993
TaqI TCGA 8 cut(s) 96, 222, 1297, 1838, 1975, 2184, 3747, 3840
TaqII GACCGA 2 cut(s) 537, 3051
TatI WGTACW 3 cut(s) 1220, 1334, 3386
TauI GCSGC 2 cut(s) 242, 2955
TseFI GTSAC 6 cut(s) 193, 886, 1000, 1528, 1538, 2194
Tsp45I GTSAC 6 cut(s) 193, 886, 1000, 1528, 1538, 2194
TspGWI ACGGA 6 cut(s) 309, 383, 947, 1050, 1055, 3040
TspMI CCCGGG 1 cut(s) 1778
Tth111I GACNNNGTC 1 cut(s) 1843
Van91I CCANNNNNTGG 4 cut(s) 905, 2138, 2318, 3674
VpaK11BI GGWCC 2 cut(s) 75, 3034
VspI ATTAAT 3 cut(s) 2010, 2306, 2363
XapI RAATTY 9 cut(s) 649, 1468, 1725, 2267, 2331, 2660, 3403, 3424, 3882
XbaI TCTAGA 2 cut(s) 2890, 3503
XceI RCATGY 2 cut(s) 160, 2680
XcmI CCANNNNNNNNNTGG 3 cut(s) 2252, 2989, 3190
XmaI CCCGGG 1 cut(s) 1778
XmnI GAANNNNTTC 2 cut(s) 2694, 2977
ZraI GACGTC 1 cut(s) 1528
ZrmI AGTACT 1 cut(s) 3388
Zsp2I ATGCAT 2 cut(s) 1237, 2416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.