AT4G30810

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
15003146 .. 15006216
3071 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G30810.1

Sequence Viewer

Length: 1440 bp
ATGGCCAAAACCAGAGGGTCTTGTTGTCTCGTCAACGCTCTAATCGCTATAGCTTTTTTGGCGACAGCCCATTTGTGTGAAGCTGGCTTGTCTCAGAAAGAACAGGACAAGGTCTCGAAATTGCCTGGTCAGAATTTTAATGTTAGTTTTGCTCACTACTCTGGGTTTGTTGCTACTAATGAGCAATTGGGAAGAGCTCTCTTTTACTGGTTATTTGAAGCCGTTGAAGATGCTAAGTCTAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCAGGATGTTCATCTGTTGCATATGGTGAAGCAGAAGAGATAGGACCATTTCACATTAAGGCAGATGGGAAGACTCTTTACCTTAATCAATATTCTTGGAACCAAGCTGCAAATATTTTGTTCCTTGATGCACCTGTTGGAGTTGGTTATTCATACTCAAACACCTCGTCTGATTTGAAGAGCAATGGTGATAAAAGAACTGCCGAAGATTCACTGAAATTTCTGCTGAAATGGGTTGAGCGGTTTCCGGAATACAAAGGAAGGGACTTTTATATAGTAGGGGAGAGCTATGCAGGACATTACATTCCTCAGCTGAGTGAAGCCATTGTAAAACATAACCAAGGTTCTGACAAAAACAGTATAAATCTGAAGGGTTACATGGTAGGAAATGGGCTGATGGACGATTTCCATGACAGGCTTGGTCTTTTCCAATATATTTGGTCGTTGGGTTTTATATCTGACCAAACATACAGCTTACTGCAACTTCAATGCGGTTTCGAATCGTTTATTCACTCCTCCAAACAGTGTAACAAGATTCTGGAGATAGCGGACAAAGAAATAGGTAACATAGACCAATACAGTGTCTTCACCCCAGCTTGTGTTGCCAATGCTTCCCAGTCAAATATGTTGCTAAAGAAAAGACCTATGACTAGCCGCGTGAGCGAACAGTATGATCCTTGTACGGAGAAACACACTACAGTTTATTTCAATCTTCCAGAGGTTCAAAAAGCCCTCCATGTCCCACCAGGACTTGCACCATCAAAATGGGATACTTGCAGTGATGTCGTGAGTGAACACTGGAATGACTCTCCTTCCTCGGTTCTAAACATTTACCACGAGCTTATAGCTGCTGGGCTTCGTATCTGGGTTTTCAGTGGGGACGCAGATGCCGTTGTACCAGTCACATCAACCCGGTACAGTATCGATGCACTAAACCTTCGTCCTTTGAGTGCCTATGGTCCTTGGTACTTAGATGGACAGGTGGGAGGGTGGAGTCAGCAGTATGCTGGTCTGAACTTTGTGACAGTGAGAGGTGCAGGCCATGAAGTTCCTTTGCACAGACCGAAGCAAGCTCTTGCGCTCTTCAAGGCTTTTATATCTGGAACTCCATTGTCCACACATGAGAACAGCATCAGCCGCGACATGTCTGAACTCGTTAGTGACTCATAA

Protein Analysis

479

Amino Acids

53.06

Weight (kDa)

5.88

Isoelectric Point (pI)

40.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 42 - 458 7.5e-146 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012531)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 511
AccII CGCG 2 cut(s) 927, 1410
AccIII TCCGGA 1 cut(s) 517
AciI CCGC 5 cut(s) 511, 762, 818, 925, 1408
AclWI GGATC 1 cut(s) 938
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 133, 488
AcuI CTGAAG 1 cut(s) 659
AfaI GTAC 4 cut(s) 952, 1167, 1187, 1238
AflIII ACRYGT 1 cut(s) 1413
AgsI TTSAA 7 cut(s) 218, 227, 448, 758, 979, 995, 1357
AjnI CCWGG 3 cut(s) 124, 271, 1015
Alw21I GWGCWC 1 cut(s) 199
Alw26I GTCTC 3 cut(s) 32, 96, 118
AlwI GGATC 1 cut(s) 938
Aor13HI TCCGGA 1 cut(s) 517
AoxI GGCC 2 cut(s) 3, 1309
ApeKI GCWGC 2 cut(s) 377, 1118
ApoI RAATTY 2 cut(s) 133, 488
ArsI GACNNNNNNTTYG 4 cut(s) 55, 87, 422, 454
AspLEI GCGC 1 cut(s) 1351
AspS9I GGNCC 3 cut(s) 269, 314, 1229
AsuC2I CCSGG 1 cut(s) 1183
AsuHPI GGTGA 3 cut(s) 308, 470, 850
AsuII TTCGAA 1 cut(s) 768
AvaII GGWCC 3 cut(s) 269, 314, 1229
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 1 cut(s) 199
BarI GAAGNNNNNNTAC 2 cut(s) 332, 364
BauI CACGAG 1 cut(s) 1106
BbsI GAAGAC 2 cut(s) 347, 847
Bbv12I GWGCWC 1 cut(s) 199
BbvCI CCTCAGC 1 cut(s) 579
BbvI GCAGC 2 cut(s) 364, 1105
BccI CCATC 4 cut(s) 329, 661, 1036, 1238
BceAI ACGGC 2 cut(s) 206, 1145
BcgI CGANNNNNNTGC 2 cut(s) 1036, 1070
BciT130I CCWGG 3 cut(s) 126, 273, 1017
BciVI GTATCC 1 cut(s) 1033
BcnI CCSGG 1 cut(s) 1183
BcoDI GTCTC 3 cut(s) 32, 96, 118
BfaI CTAG 1 cut(s) 921
BfmI CTRYAG 2 cut(s) 48, 966
BfuI GTATCC 1 cut(s) 1033
BisI GCNGC 4 cut(s) 378, 925, 1119, 1408
BlsI GCNGC 4 cut(s) 379, 926, 1120, 1409
Bme1390I CCNGG 4 cut(s) 126, 273, 1017, 1183
Bme18I GGWCC 3 cut(s) 269, 314, 1229
BmgT120I GGNCC 3 cut(s) 269, 314, 1229
BmiI GGNNCC 1 cut(s) 371
BmrFI CCNGG 4 cut(s) 126, 273, 1017, 1183
BmrI ACTGGG 1 cut(s) 880
BmsI GCATC 5 cut(s) 220, 388, 1147, 1186, 1410
BmuI ACTGGG 1 cut(s) 880
BpiI GAAGAC 2 cut(s) 347, 847
BpmI CTGGAG 1 cut(s) 830
Bpu10I CCTNAGC 1 cut(s) 579
Bpu14I TTCGAA 1 cut(s) 768
BpuMI CCSGG 1 cut(s) 1183
Bsa29I ATCGAT 1 cut(s) 1194
BsaBI GATNNNNATC 1 cut(s) 280
BsaI GGTCTC 1 cut(s) 118
BsaJI CCNNGG 3 cut(s) 610, 1086, 1232
BsaWI WCCGGW 1 cut(s) 517
Bse1I ACTGG 4 cut(s) 212, 886, 1073, 1169
Bse3DI GCAATG 1 cut(s) 460
Bse8I GATNNNNATC 1 cut(s) 280
BseAI TCCGGA 1 cut(s) 517
BseBI CCWGG 3 cut(s) 126, 273, 1017
BseCI ATCGAT 1 cut(s) 1194
BseDI CCNNGG 3 cut(s) 610, 1086, 1232
BseGI GGATG 1 cut(s) 281
BseJI GATNNNNATC 1 cut(s) 280
BseMI GCAATG 1 cut(s) 460
BseMII CTCAG 3 cut(s) 107, 575, 593
BseNI ACTGG 4 cut(s) 212, 886, 1073, 1169
BseRI GAGGAG 1 cut(s) 775
BseXI GCAGC 2 cut(s) 364, 1105
BseYI CCCAGC 2 cut(s) 862, 1121
BsgI GTGCAG 1 cut(s) 1326
Bsh1236I CGCG 2 cut(s) 927, 1410
BshFI GGCC 2 cut(s) 5, 1311
BshVI ATCGAT 1 cut(s) 1194
BsiHKAI GWGCWC 1 cut(s) 199
BsiSI CCGG 2 cut(s) 518, 1183
BslFI GGGAC 3 cut(s) 548, 995, 1163
BsmAI GTCTC 3 cut(s) 32, 96, 118
BsmFI GGGAC 3 cut(s) 548, 995, 1163
BsnI GGCC 2 cut(s) 5, 1311
Bso31I GGTCTC 1 cut(s) 118
Bsp119I TTCGAA 1 cut(s) 768
Bsp1286I GDGCHC 1 cut(s) 199
Bsp13I TCCGGA 1 cut(s) 517
Bsp143I GATC 1 cut(s) 943
BspACI CCGC 5 cut(s) 511, 762, 818, 925, 1408
BspANI GGCC 2 cut(s) 5, 1311
BspCNI CTCAG 3 cut(s) 106, 576, 592
BspDI ATCGAT 1 cut(s) 1194
BspEI TCCGGA 1 cut(s) 517
BspFNI CGCG 2 cut(s) 927, 1410
BspLI GGNNCC 1 cut(s) 371
BspPI GGATC 1 cut(s) 938
BspQI GCTCTTC 3 cut(s) 187, 443, 1358
BspT104I TTCGAA 1 cut(s) 768
BspTNI GGTCTC 1 cut(s) 118
BsrBI CCGCTC 1 cut(s) 511
BsrDI GCAATG 1 cut(s) 460
BsrI ACTGG 4 cut(s) 212, 886, 1073, 1169
BssECI CCNNGG 3 cut(s) 610, 1086, 1232
BssMI GATC 1 cut(s) 943
BssSI CACGAG 1 cut(s) 1106
BssT1I CCWWGG 2 cut(s) 610, 1232
Bst2BI CACGAG 1 cut(s) 1106
Bst2UI CCWGG 3 cut(s) 126, 273, 1017
Bst4CI ACNGT 7 cut(s) 629, 795, 851, 939, 970, 1190, 1297
Bst6I CTCTTC 4 cut(s) 187, 300, 443, 1358
BstBI TTCGAA 1 cut(s) 768
BstC8I GCNNGC 3 cut(s) 85, 1309, 1341
BstDEI CTNAG 6 cut(s) 93, 234, 240, 579, 584, 1240
BstF5I GGATG 1 cut(s) 281
BstFNI CGCG 2 cut(s) 927, 1410
BstHHI GCGC 1 cut(s) 1351
BstKTI GATC 1 cut(s) 946
BstMAI GTCTC 3 cut(s) 32, 96, 118
BstMBI GATC 1 cut(s) 943
BstMWI GCNNNNNNNGC 5 cut(s) 44, 59, 872, 930, 1407
BstNI CCWGG 3 cut(s) 126, 273, 1017
BstNSI RCATGY 1 cut(s) 1417
BstSCI CCNGG 4 cut(s) 124, 271, 1015, 1181
BstSFI CTRYAG 2 cut(s) 48, 966
BstUI CGCG 2 cut(s) 927, 1410
BstV1I GCAGC 2 cut(s) 364, 1105
BstV2I GAAGAC 2 cut(s) 347, 847
BstXI CCANNNNNNTGG 1 cut(s) 1035
Bsu15I ATCGAT 1 cut(s) 1194
BsuI GTATCC 1 cut(s) 1033
BsuRI GGCC 2 cut(s) 5, 1311
BsuTUI ATCGAT 1 cut(s) 1194
BtsCI GGATG 1 cut(s) 281
BtsI GCAGTG 1 cut(s) 1054
BtsIMutI CAGTG 7 cut(s) 482, 800, 856, 1054, 1066, 1150, 1302
Cac8I GCNNGC 3 cut(s) 85, 1309, 1341
CfoI GCGC 1 cut(s) 1351
Cfr13I GGNCC 3 cut(s) 269, 314, 1229
ClaI ATCGAT 1 cut(s) 1194
CseI GACGC 1 cut(s) 1160
Csp6I GTAC 4 cut(s) 951, 1166, 1186, 1237
CviAII CATG 6 cut(s) 649, 680, 1007, 1313, 1391, 1414
CviQI GTAC 4 cut(s) 951, 1166, 1186, 1237
DdeI CTNAG 6 cut(s) 93, 234, 240, 579, 584, 1240
DpnI GATC 1 cut(s) 945
DpnII GATC 1 cut(s) 943
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 4 cut(s) 187, 300, 443, 1358
EarI CTCTTC 4 cut(s) 187, 300, 443, 1358
Ecl136II GAGCTC 1 cut(s) 197
Eco130I CCWWGG 2 cut(s) 610, 1232
Eco24I GRGCYC 1 cut(s) 199
Eco31I GGTCTC 1 cut(s) 118
Eco47I GGWCC 3 cut(s) 269, 314, 1229
Eco53kI GAGCTC 1 cut(s) 197
Eco57I CTGAAG 1 cut(s) 659
EcoICRI GAGCTC 1 cut(s) 197
EcoRII CCWGG 3 cut(s) 124, 271, 1015
EcoT14I CCWWGG 2 cut(s) 610, 1232
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 2 cut(s) 610, 1232
FaeI CATG 6 cut(s) 652, 683, 1010, 1316, 1394, 1417
FaqI GGGAC 3 cut(s) 548, 995, 1163
FatI CATG 6 cut(s) 648, 679, 1006, 1312, 1390, 1413
FauNDI CATATG 1 cut(s) 292
Fnu4HI GCNGC 4 cut(s) 378, 925, 1119, 1408
FokI GGATG 1 cut(s) 288
FriOI GRGCYC 1 cut(s) 199
Fsp4HI GCNGC 4 cut(s) 378, 925, 1119, 1408
FspBI CTAG 1 cut(s) 921
GlaI GCGC 1 cut(s) 1350
GluI GCNGC 4 cut(s) 378, 925, 1119, 1408
GsaI CCCAGC 2 cut(s) 866, 1125
GsuI CTGGAG 1 cut(s) 830
HaeIII GGCC 2 cut(s) 5, 1311
HapII CCGG 2 cut(s) 518, 1183
HgaI GACGC 1 cut(s) 1160
HhaI GCGC 1 cut(s) 1351
Hin1II CATG 6 cut(s) 652, 683, 1010, 1316, 1394, 1417
Hin6I GCGC 1 cut(s) 1349
HinP1I GCGC 1 cut(s) 1349
HincII GTYRAC 1 cut(s) 34
HindII GTYRAC 1 cut(s) 34
HinfI GANTC 7 cut(s) 343, 479, 770, 805, 1076, 1264, 1433
HpaII CCGG 2 cut(s) 518, 1183
HphI GGTGA 3 cut(s) 308, 470, 850
Hpy166II GTNNAC 3 cut(s) 34, 1064, 1386
Hpy188I TCNGA 8 cut(s) 96, 132, 442, 619, 639, 730, 1284, 1420
Hpy188III TCNNGA 6 cut(s) 115, 518, 809, 986, 1057, 1371
Hpy8I GTNNAC 3 cut(s) 34, 1064, 1386
HpyAV CCTTC 4 cut(s) 525, 634, 1092, 1217
HpyCH4III ACNGT 7 cut(s) 629, 795, 851, 939, 970, 1190, 1297
HpyF10VI GCNNNNNNNGC 5 cut(s) 44, 59, 872, 930, 1407
HpyF3I CTNAG 6 cut(s) 93, 234, 240, 579, 584, 1240
Hsp92II CATG 6 cut(s) 652, 683, 1010, 1316, 1394, 1417
HspAI GCGC 1 cut(s) 1349
Kpn2I TCCGGA 1 cut(s) 517
Kzo9I GATC 1 cut(s) 943
LguI GCTCTTC 3 cut(s) 187, 443, 1358
Lsp1109I GCAGC 2 cut(s) 364, 1105
LweI GCATC 5 cut(s) 220, 388, 1147, 1186, 1410
MaeI CTAG 1 cut(s) 921
MaeIII GTNAC 6 cut(s) 644, 797, 833, 1171, 1291, 1430
MalI GATC 1 cut(s) 945
MbiI CCGCTC 1 cut(s) 511
MboI GATC 1 cut(s) 943
MboII GAAGA 9 cut(s) 204, 239, 317, 352, 460, 488, 847, 974, 1345
MfeI CAATTG 1 cut(s) 185
MhlI GDGCHC 1 cut(s) 199
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 119, 133, 185, 488
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 337, 1070, 1273, 1427
MmeI TCCRAC 1 cut(s) 388
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 1 cut(s) 517
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 138, 327, 354
MslI CAYNNNNRTG 3 cut(s) 75, 1033, 1071
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 583
MspI CCGG 2 cut(s) 518, 1183
MspR9I CCNGG 4 cut(s) 126, 273, 1017, 1183
MunI CAATTG 1 cut(s) 185
MvaI CCWGG 3 cut(s) 126, 273, 1017
MvnI CGCG 2 cut(s) 927, 1410
MwoI GCNNNNNNNGC 5 cut(s) 44, 59, 872, 930, 1407
NciI CCSGG 1 cut(s) 1183
NdeI CATATG 1 cut(s) 292
NdeII GATC 1 cut(s) 943
NlaIII CATG 6 cut(s) 652, 683, 1010, 1316, 1394, 1417
NlaIV GGNNCC 1 cut(s) 371
NmuCI GTSAC 3 cut(s) 1171, 1291, 1430
NspI RCATGY 1 cut(s) 1417
NspV TTCGAA 1 cut(s) 768
PciI ACATGT 1 cut(s) 1413
PciSI GCTCTTC 3 cut(s) 187, 443, 1358
PcsI WCGNNNNNNNCGW 1 cut(s) 1158
PfeI GAWTC 3 cut(s) 479, 770, 805
PflFI GACNNNGTC 1 cut(s) 110
PkrI GCNGC 4 cut(s) 379, 926, 1120, 1409
PleI GAGTC 4 cut(s) 337, 1070, 1272, 1427
PpsI GAGTC 4 cut(s) 337, 1070, 1272, 1427
PscI ACATGT 1 cut(s) 1413
Psp124BI GAGCTC 1 cut(s) 199
Psp6I CCWGG 3 cut(s) 124, 271, 1015
PspFI CCCAGC 2 cut(s) 862, 1121
PspGI CCWGG 3 cut(s) 124, 271, 1015
PspN4I GGNNCC 1 cut(s) 371
PspPI GGNCC 3 cut(s) 269, 314, 1229
PsyI GACNNNGTC 1 cut(s) 110
PvuII CAGCTG 1 cut(s) 583
RsaI GTAC 4 cut(s) 952, 1167, 1187, 1238
RsaNI GTAC 4 cut(s) 951, 1166, 1186, 1237
RseI CAYNNNNRTG 3 cut(s) 75, 1033, 1071
SacI GAGCTC 1 cut(s) 199
SapI GCTCTTC 3 cut(s) 187, 443, 1358
SaqAI TTAA 3 cut(s) 138, 327, 354
SatI GCNGC 4 cut(s) 378, 925, 1119, 1408
Sau3AI GATC 1 cut(s) 943
Sau96I GGNCC 3 cut(s) 269, 314, 1229
SchI GAGTC 4 cut(s) 337, 1070, 1273, 1427
ScrFI CCNGG 4 cut(s) 126, 273, 1017, 1183
SduI GDGCHC 1 cut(s) 199
SfaNI GCATC 5 cut(s) 220, 388, 1147, 1186, 1410
SfcI CTRYAG 2 cut(s) 48, 966
SfuI TTCGAA 1 cut(s) 768
SinI GGWCC 3 cut(s) 269, 314, 1229
SmiMI CAYNNNNRTG 3 cut(s) 75, 1033, 1071
Sse9I AATT 4 cut(s) 119, 133, 185, 488
SsiI CCGC 5 cut(s) 511, 762, 818, 925, 1408
SspI AATATT 2 cut(s) 362, 385
SspMI CTAG 1 cut(s) 921
SstI GAGCTC 1 cut(s) 199
StyD4I CCNGG 4 cut(s) 124, 271, 1015, 1181
StyI CCWWGG 2 cut(s) 610, 1232
TaaI ACNGT 7 cut(s) 629, 795, 851, 939, 970, 1190, 1297
TaqI TCGA 3 cut(s) 116, 768, 1194
TaqII GACCGA 1 cut(s) 1348
TasI AATT 4 cut(s) 119, 133, 185, 488
TauI GCSGC 2 cut(s) 927, 1410
TfiI GAWTC 3 cut(s) 479, 770, 805
Tru1I TTAA 3 cut(s) 138, 327, 354
Tru9I TTAA 3 cut(s) 138, 327, 354
TscAI CASTG 7 cut(s) 489, 800, 856, 1054, 1073, 1150, 1302
TseFI GTSAC 3 cut(s) 1171, 1291, 1430
TseI GCWGC 2 cut(s) 377, 1118
Tsp45I GTSAC 3 cut(s) 1171, 1291, 1430
TspDTI ATGAA 3 cut(s) 270, 411, 1329
TspGWI ACGGA 1 cut(s) 968
TspRI CASTG 7 cut(s) 489, 800, 856, 1054, 1073, 1150, 1302
Tth111I GACNNNGTC 1 cut(s) 110
VpaK11BI GGWCC 3 cut(s) 269, 314, 1229
XapI RAATTY 2 cut(s) 133, 488
XceI RCATGY 1 cut(s) 1417
XcmI CCANNNNNNNNNTGG 1 cut(s) 686
XspI CTAG 1 cut(s) 921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.