Rh2AG006500

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
602100 .. 605404
3305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG006500.1

Sequence Viewer

Length: 1212 bp
ATGTTCAAACCCAGATGGGCGTTTGTTCTCACCATCCTCCTCAATCTTCATCTGGGTAGTGTTTTTGCTGCTATTCCCACAGACCCACTTGTCCAGCAGCGATCGGATAGAGTTCTTCGGCTTCCGGGCCAGACCTTCAACGTGAGCTTTGCACACTATGCTGGGTACGTCAATGTTAATGAAGAAGCTGGGAGGGCTCTCTTCTACTGGTTCGTTGAGGCTGCTGAGGACCCTGCTTCTAAGCCTCTTGTTCTTTGGCTAAATGGAGTTGCTAACATTCTGTTTATTGATTCACCTGTTGGAGTTGGGTTTTCTTATTCAAACACATCCTCTGATTTGCTATCCAATGGAGATAAAAGGACTGGACATTATGTTCCTCAGCTAAGCCAAGCAATTGTGAAGTACAACTTGGCAACTAAGGAAAATTCAATTAATCTGAAGGGCTATATGGTGGGAAATGCTCTAACCGATGATTACCATGATCACTTGGGGGTTTTCCAGTTTATGTGGTCGGCTGGTTTGATCTCTGATCAAACATACAAGGCGCTGAACCTTTTTTGCGATTTCCAGTCATTCATACACACCTCAAATTCATGTGATAGTATATTAGACATTGCTAGTGCAGAACTTGGAAACATTGACCCTTACAGCATTTACACTCCTTCTTGCCCTGCTAATGTTAGCCAGTCAAATCGGCTGTTGAAACGAATGCATGTGGCTGGCCGTATCAATGAAAGGTATGATCCTTGCACTGAGGAACACTCAGTTGTATACTTCAATCTACCCGAGGTTCAAAAGGCCCTTCATGTTGATCGAAACCATGCACCATCTAAATGGACAACATGCAGTGAGGTGGTGTACGCTACTTGGAAGGATTCTCCTAGGACAGTGCTGGATGTCTACCGGGAGTTGATAATTTCAGGACTTCGTATATGGATGTTCAGTGGTGATACAGATGCGGTAATCCCAGTTACATCTACCCGATACAGTATAGATTCCCTTAAGCTTCCAACTGTTAAACCTTGGCGTCCCTGGTATGATGATGGCCAGGTTGGAGGCTGGACTCAAGAATATGCTGGGCTGACATTCGTATCAGTGAGGGGAGCAGGCCATGAAGTCCCTCTGCACAGACCCAAGCTAGCTCTCGCACTTATCAAAAACTTCTTGTCAGGATCCTCAATGCCATCAGCACAGCTTCTCAGTGACTCCTAG

Protein Analysis

403

Amino Acids

45.04

Weight (kDa)

6.17

Isoelectric Point (pI)

42.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 42 - 89 1.7e-15 Serine carboxypeptidase
Peptidase_S10 PF00450 90 - 121 2.7e-07 Serine carboxypeptidase
Peptidase_S10 PF00450 121 - 391 6e-71 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012531)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 89
AccI GTMKAC 2 cut(s) 771, 900
AciI CCGC 1 cut(s) 959
AclWI GGATC 3 cut(s) 737, 1167, 1180
AcoI YGGCCR 2 cut(s) 721, 1045
AcsI RAATTY 2 cut(s) 424, 589
AcuI CTGAAG 1 cut(s) 458
AcyI GRCGYC 1 cut(s) 1027
AfaI GTAC 3 cut(s) 167, 404, 860
AflII CTTAAG 1 cut(s) 1001
AgsI TTSAA 7 cut(s) 7, 139, 321, 429, 703, 778, 794
AjnI CCWGG 2 cut(s) 1031, 1047
AjuI GAANNNNNNNTTGG 2 cut(s) 392, 424
AloI GAACNNNNNNTCC 2 cut(s) 357, 389
AluBI AGCT 7 cut(s) 147, 188, 382, 1006, 1138, 1142, 1195
AluI AGCT 7 cut(s) 147, 188, 382, 1006, 1138, 1142, 1195
AlwI GGATC 3 cut(s) 737, 1167, 1180
Ama87I CYCGRG 1 cut(s) 785
AoxI GGCC 5 cut(s) 127, 721, 798, 1045, 1108
ApeKI GCWGC 3 cut(s) 68, 97, 221
ApoI RAATTY 2 cut(s) 424, 589
AseI ATTAAT 1 cut(s) 432
AspA2I CCTAGG 1 cut(s) 881
AspLEI GCGC 1 cut(s) 547
AspS9I GGNCC 3 cut(s) 127, 229, 799
AsuC2I CCSGG 2 cut(s) 126, 905
AsuHPI GGTGA 3 cut(s) 22, 285, 959
AsuNHI GCTAGC 1 cut(s) 1138
AvaI CYCGRG 1 cut(s) 785
AvaII GGWCC 1 cut(s) 229
AvrII CCTAGG 1 cut(s) 881
BaeI ACNNNNGTAYC 2 cut(s) 1074, 1107
BalI TGGCCA 1 cut(s) 1047
BamHI GGATCC 1 cut(s) 1172
BanII GRGCYC 1 cut(s) 199
BbvCI CCTCAGC 2 cut(s) 225, 378
BbvI GCAGC 3 cut(s) 55, 109, 208
BccI CCATC 5 cut(s) 9, 41, 835, 1037, 1192
BceAI ACGGC 1 cut(s) 708
BciT130I CCWGG 2 cut(s) 1033, 1049
BclI TGATCA 2 cut(s) 481, 529
BcnI CCSGG 2 cut(s) 126, 905
BfaI CTAG 4 cut(s) 618, 882, 1139, 1210
BfoI RGCGCY 1 cut(s) 548
BfrI CTTAAG 1 cut(s) 1001
BisI GCNGC 3 cut(s) 69, 98, 222
BlnI CCTAGG 1 cut(s) 881
BlpI GCTNAGC 1 cut(s) 383
BlsI GCNGC 3 cut(s) 70, 99, 223
Bme1390I CCNGG 4 cut(s) 126, 905, 1033, 1049
Bme18I GGWCC 1 cut(s) 229
BmeT110I CYCGRG 1 cut(s) 785
BmgT120I GGNCC 3 cut(s) 127, 229, 799
BmiI GGNNCC 2 cut(s) 231, 1174
BmrFI CCNGG 4 cut(s) 126, 905, 1033, 1049
BmrI ACTGGG 1 cut(s) 962
BmsI GCATC 1 cut(s) 946
BmtI GCTAGC 1 cut(s) 1142
BmuI ACTGGG 1 cut(s) 962
BplI GAGNNNNNCTC 2 cut(s) 746, 778
Bpu10I CCTNAGC 2 cut(s) 225, 378
Bpu1102I GCTNAGC 1 cut(s) 383
BpuEI CTTGAG 1 cut(s) 1050
BpuMI CCSGG 2 cut(s) 126, 905
BsaHI GRCGYC 1 cut(s) 1027
BsaJI CCNNGG 4 cut(s) 786, 881, 1022, 1031
Bse1I ACTGG 6 cut(s) 212, 367, 499, 568, 685, 968
Bse3DI GCAATG 1 cut(s) 612
BseBI CCWGG 2 cut(s) 1033, 1049
BseDI CCNNGG 4 cut(s) 786, 881, 1022, 1031
BseGI GGATG 4 cut(s) 33, 326, 901, 942
BseMI GCAATG 1 cut(s) 612
BseMII CTCAG 4 cut(s) 216, 392, 744, 777
BseNI ACTGG 6 cut(s) 212, 367, 499, 568, 685, 968
BseRI GAGGAG 1 cut(s) 29
BseXI GCAGC 3 cut(s) 55, 109, 208
BseYI CCCAGC 3 cut(s) 161, 188, 1076
BsgI GTGCAG 2 cut(s) 642, 1109
Bsh1285I CGRYCG 1 cut(s) 104
BshFI GGCC 5 cut(s) 129, 723, 800, 1047, 1110
BsiEI CGRYCG 1 cut(s) 104
BsiHKCI CYCGRG 1 cut(s) 785
BsiSI CCGG 2 cut(s) 125, 904
BslFI GGGAC 2 cut(s) 1014, 1103
BsmFI GGGAC 2 cut(s) 1014, 1103
BsmI GAATGC 1 cut(s) 714
BsnI GGCC 5 cut(s) 129, 723, 800, 1047, 1110
BsoBI CYCGRG 1 cut(s) 785
Bsp1286I GDGCHC 1 cut(s) 199
Bsp143I GATC 7 cut(s) 101, 481, 522, 529, 742, 811, 1172
Bsp1720I GCTNAGC 1 cut(s) 383
BspACI CCGC 1 cut(s) 959
BspANI GGCC 5 cut(s) 129, 723, 800, 1047, 1110
BspCNI CTCAG 5 cut(s) 217, 391, 745, 776, 1212
BspLI GGNNCC 2 cut(s) 231, 1174
BspOI GCTAGC 1 cut(s) 1142
BspPI GGATC 3 cut(s) 737, 1167, 1180
BspTI CTTAAG 1 cut(s) 1001
BsrDI GCAATG 1 cut(s) 612
BsrI ACTGG 6 cut(s) 212, 367, 499, 568, 685, 968
BssECI CCNNGG 4 cut(s) 786, 881, 1022, 1031
BssMI GATC 7 cut(s) 101, 481, 522, 529, 742, 811, 1172
BssNAI GTATAC 1 cut(s) 772
BssNI GRCGYC 1 cut(s) 1027
BssT1I CCWWGG 2 cut(s) 881, 1022
Bst1107I GTATAC 1 cut(s) 772
Bst2UI CCWGG 2 cut(s) 1033, 1049
Bst4CI ACNGT 3 cut(s) 889, 989, 1015
Bst6I CTCTTC 1 cut(s) 206
BstACI GRCGYC 1 cut(s) 1027
BstAFI CTTAAG 1 cut(s) 1001
BstAPI GCANNNNNTGC 1 cut(s) 158
BstC8I GCNNGC 3 cut(s) 721, 1108, 1140
BstDEI CTNAG 8 cut(s) 225, 240, 378, 383, 417, 753, 763, 1199
BstF5I GGATG 4 cut(s) 33, 326, 901, 942
BstH2I RGCGCY 1 cut(s) 548
BstHHI GCGC 1 cut(s) 547
BstKTI GATC 7 cut(s) 104, 484, 525, 532, 745, 814, 1175
BstMBI GATC 7 cut(s) 101, 481, 522, 529, 742, 811, 1172
BstMCI CGRYCG 1 cut(s) 104
BstMWI GCNNNNNNNGC 2 cut(s) 158, 194
BstNI CCWGG 2 cut(s) 1033, 1049
BstNSI RCATGY 2 cut(s) 716, 846
BstSCI CCNGG 4 cut(s) 124, 903, 1031, 1047
BstV1I GCAGC 3 cut(s) 55, 109, 208
BstX2I RGATCY 1 cut(s) 1172
BstXI CCANNNNNNTGG 1 cut(s) 834
BstYI RGATCY 1 cut(s) 1172
BstZ17I GTATAC 1 cut(s) 772
BsuRI GGCC 5 cut(s) 129, 723, 800, 1047, 1110
BtsCI GGATG 4 cut(s) 33, 326, 901, 942
BtsI GCAGTG 1 cut(s) 853
BtsIMutI CAGTG 6 cut(s) 750, 853, 894, 949, 1101, 1207
Cac8I GCNNGC 3 cut(s) 721, 1108, 1140
CfoI GCGC 1 cut(s) 547
Cfr13I GGNCC 3 cut(s) 127, 229, 799
CseI GACGC 1 cut(s) 1016
Csp6I GTAC 3 cut(s) 166, 403, 859
CviAII CATG 7 cut(s) 479, 594, 713, 806, 821, 843, 1112
CviQI GTAC 3 cut(s) 166, 403, 859
DdeI CTNAG 8 cut(s) 225, 240, 378, 383, 417, 753, 763, 1199
DpnI GATC 7 cut(s) 103, 483, 524, 531, 744, 813, 1174
DpnII GATC 7 cut(s) 101, 481, 522, 529, 742, 811, 1172
DrdI GACNNNNNNGTC 1 cut(s) 89
DseDI GACNNNNNNGTC 1 cut(s) 89
EaeI YGGCCR 2 cut(s) 721, 1045
Eam1104I CTCTTC 1 cut(s) 206
EarI CTCTTC 1 cut(s) 206
Eco130I CCWWGG 2 cut(s) 881, 1022
Eco24I GRGCYC 1 cut(s) 199
Eco47I GGWCC 1 cut(s) 229
Eco57I CTGAAG 1 cut(s) 458
Eco88I CYCGRG 1 cut(s) 785
EcoO109I RGGNCCY 2 cut(s) 229, 799
EcoRII CCWGG 2 cut(s) 1031, 1047
EcoT14I CCWWGG 2 cut(s) 881, 1022
EcoT22I ATGCAT 1 cut(s) 714
EcoT38I GRGCYC 1 cut(s) 199
ErhI CCWWGG 2 cut(s) 881, 1022
FaeI CATG 7 cut(s) 482, 597, 716, 809, 824, 846, 1115
FalI AAGNNNNNCTT 2 cut(s) 392, 424
FaqI GGGAC 2 cut(s) 1014, 1103
FatI CATG 7 cut(s) 478, 593, 712, 805, 820, 842, 1111
FbaI TGATCA 2 cut(s) 481, 529
FblI GTMKAC 2 cut(s) 771, 900
Fnu4HI GCNGC 3 cut(s) 69, 98, 222
FokI GGATG 4 cut(s) 20, 313, 908, 949
FriOI GRGCYC 1 cut(s) 199
Fsp4HI GCNGC 3 cut(s) 69, 98, 222
FspBI CTAG 4 cut(s) 618, 882, 1139, 1210
GlaI GCGC 1 cut(s) 546
GluI GCNGC 3 cut(s) 69, 98, 222
GsaI CCCAGC 3 cut(s) 165, 192, 1080
HaeII RGCGCY 1 cut(s) 548
HaeIII GGCC 5 cut(s) 129, 723, 800, 1047, 1110
HapII CCGG 2 cut(s) 125, 904
HgaI GACGC 1 cut(s) 1016
HhaI GCGC 1 cut(s) 547
Hin1I GRCGYC 1 cut(s) 1027
Hin1II CATG 7 cut(s) 482, 597, 716, 809, 824, 846, 1115
Hin6I GCGC 1 cut(s) 545
HinP1I GCGC 1 cut(s) 545
HindIII AAGCTT 1 cut(s) 1004
HinfI GANTC 5 cut(s) 290, 875, 995, 1063, 1205
HpaII CCGG 2 cut(s) 125, 904
HphI GGTGA 3 cut(s) 22, 285, 959
Hpy166II GTNNAC 3 cut(s) 772, 859, 901
Hpy188I TCNGA 4 cut(s) 106, 334, 438, 529
Hpy188III TCNNGA 3 cut(s) 921, 1067, 1170
Hpy8I GTNNAC 3 cut(s) 772, 859, 901
HpyAV CCTTC 5 cut(s) 145, 433, 672, 812, 865
HpyCH4III ACNGT 3 cut(s) 889, 989, 1015
HpyCH4IV ACGT 2 cut(s) 141, 168
HpyCH4V TGCA 7 cut(s) 152, 623, 712, 750, 824, 846, 1126
HpyF10VI GCNNNNNNNGC 2 cut(s) 158, 194
HpyF3I CTNAG 8 cut(s) 225, 240, 378, 383, 417, 753, 763, 1199
HpySE526I ACGT 2 cut(s) 141, 168
Hsp92I GRCGYC 1 cut(s) 1027
Hsp92II CATG 7 cut(s) 482, 597, 716, 809, 824, 846, 1115
HspAI GCGC 1 cut(s) 545
Ksp22I TGATCA 2 cut(s) 481, 529
Kzo9I GATC 7 cut(s) 101, 481, 522, 529, 742, 811, 1172
LmnI GCTCC 1 cut(s) 1103
Lsp1109I GCAGC 3 cut(s) 55, 109, 208
LweI GCATC 1 cut(s) 946
MaeI CTAG 4 cut(s) 618, 882, 1139, 1210
MaeII ACGT 2 cut(s) 141, 168
MaeIII GTNAC 2 cut(s) 970, 1202
MalI GATC 7 cut(s) 103, 483, 524, 531, 744, 813, 1174
MboI GATC 7 cut(s) 101, 481, 522, 529, 742, 811, 1172
MboII GAAGA 4 cut(s) 38, 107, 193, 194
MfeI CAATTG 1 cut(s) 393
MflI RGATCY 1 cut(s) 1172
MhlI GDGCHC 1 cut(s) 199
MlsI TGGCCA 1 cut(s) 1047
MluCI AATT 5 cut(s) 393, 424, 429, 589, 915
MluNI TGGCCA 1 cut(s) 1047
MlyI GAGTC 2 cut(s) 1057, 1199
MmeI TCCRAC 3 cut(s) 280, 1033, 1034
Mox20I TGGCCA 1 cut(s) 1047
Mph1103I ATGCAT 1 cut(s) 714
MscI TGGCCA 1 cut(s) 1047
MseI TTAA 4 cut(s) 177, 432, 1002, 1017
MslI CAYNNNNRTG 1 cut(s) 832
Msp20I TGGCCA 1 cut(s) 1047
MspCI CTTAAG 1 cut(s) 1001
MspI CCGG 2 cut(s) 125, 904
MspR9I CCNGG 4 cut(s) 126, 905, 1033, 1049
MunI CAATTG 1 cut(s) 393
Mva1269I GAATGC 1 cut(s) 714
MvaI CCWGG 2 cut(s) 1033, 1049
MwoI GCNNNNNNNGC 2 cut(s) 158, 194
NciI CCSGG 2 cut(s) 126, 905
NdeII GATC 7 cut(s) 101, 481, 522, 529, 742, 811, 1172
NheI GCTAGC 1 cut(s) 1138
NlaIII CATG 7 cut(s) 482, 597, 716, 809, 824, 846, 1115
NlaIV GGNNCC 2 cut(s) 231, 1174
NmuCI GTSAC 1 cut(s) 1202
NsiI ATGCAT 1 cut(s) 714
NspI RCATGY 2 cut(s) 716, 846
PctI GAATGC 1 cut(s) 714
PfeI GAWTC 3 cut(s) 290, 875, 995
PkrI GCNGC 3 cut(s) 70, 99, 223
Ple19I CGATCG 1 cut(s) 104
PleI GAGTC 2 cut(s) 1057, 1199
PpsI GAGTC 2 cut(s) 1057, 1199
PpuMI RGGWCCY 1 cut(s) 229
PshBI ATTAAT 1 cut(s) 432
Psp5II RGGWCCY 1 cut(s) 229
Psp6I CCWGG 2 cut(s) 1031, 1047
PspFI CCCAGC 3 cut(s) 161, 188, 1076
PspGI CCWGG 2 cut(s) 1031, 1047
PspN4I GGNNCC 2 cut(s) 231, 1174
PspPI GGNCC 3 cut(s) 127, 229, 799
PspPPI RGGWCCY 1 cut(s) 229
PsuI RGATCY 1 cut(s) 1172
PvuI CGATCG 1 cut(s) 104
RsaI GTAC 3 cut(s) 167, 404, 860
RsaNI GTAC 3 cut(s) 166, 403, 859
RseI CAYNNNNRTG 1 cut(s) 832
SaqAI TTAA 4 cut(s) 177, 432, 1002, 1017
SatI GCNGC 3 cut(s) 69, 98, 222
Sau3AI GATC 7 cut(s) 101, 481, 522, 529, 742, 811, 1172
Sau96I GGNCC 3 cut(s) 127, 229, 799
SchI GAGTC 2 cut(s) 1057, 1199
ScrFI CCNGG 4 cut(s) 126, 905, 1033, 1049
SduI GDGCHC 1 cut(s) 199
SfaNI GCATC 1 cut(s) 946
SinI GGWCC 1 cut(s) 229
SmiMI CAYNNNNRTG 1 cut(s) 832
SmlI CTYRAG 2 cut(s) 1001, 1065
SmoI CTYRAG 2 cut(s) 1001, 1065
Sse9I AATT 5 cut(s) 393, 424, 429, 589, 915
SsiI CCGC 1 cut(s) 959
SspMI CTAG 4 cut(s) 618, 882, 1139, 1210
StyD4I CCNGG 4 cut(s) 124, 903, 1031, 1047
StyI CCWWGG 2 cut(s) 881, 1022
TaaI ACNGT 3 cut(s) 889, 989, 1015
TaiI ACGT 2 cut(s) 144, 171
TaqI TCGA 1 cut(s) 814
TasI AATT 5 cut(s) 393, 424, 429, 589, 915
TatI WGTACW 1 cut(s) 402
TfiI GAWTC 3 cut(s) 290, 875, 995
Tru1I TTAA 4 cut(s) 177, 432, 1002, 1017
Tru9I TTAA 4 cut(s) 177, 432, 1002, 1017
TscAI CASTG 6 cut(s) 757, 853, 894, 949, 1101, 1207
TseFI GTSAC 1 cut(s) 1202
TseI GCWGC 3 cut(s) 68, 97, 221
Tsp45I GTSAC 1 cut(s) 1202
TspDTI ATGAA 7 cut(s) 38, 195, 565, 582, 747, 794, 1128
TspRI CASTG 6 cut(s) 757, 853, 894, 949, 1101, 1207
Vha464I CTTAAG 1 cut(s) 1001
VpaK11BI GGWCC 1 cut(s) 229
VspI ATTAAT 1 cut(s) 432
XapI RAATTY 2 cut(s) 424, 589
XceI RCATGY 2 cut(s) 716, 846
XmaJI CCTAGG 1 cut(s) 881
XmiI GTMKAC 2 cut(s) 771, 900
XspI CTAG 4 cut(s) 618, 882, 1139, 1210
Zsp2I ATGCAT 1 cut(s) 714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.