Rmu_sc0011989.1_g000001

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011989.1
Physical Location & Seq
Forward (+)
1 .. 3957
3957 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011989.1_g000001.1.cds

Sequence Viewer

Length: 1448 bp
tccataattgttacctcatcacacagcttccgaaaatgttcaaacccagatgggcgtttgttctcaccatcctcctccatcttcatctgggtagtgtttttgccactattcccacagacccacttgtccagcagcgatcggatagagttcttcggcttccgggccagaccttcaacgtgagctttgcacactatgctgggtacgtcaatgttaatgaagaagctgggagggctctcttctactggttcgttgaggctgctgaggaccctgcttctaagccccttgttctttggctaaatggaggacctggatgttcatcaattgcttatgggatggcagaggaagttggcccatttcatattcatgctgatgggaagacactgtatttgaatccttactcttggaatcaagttgctaacattctgtttattgattcacctgttggagttgggttttcttattcaaacacatcctctgatttgctatccaatggagataaaaggactgctaaagactctctggcatttttgttgaagtggcttgagcgctttcccgagtacaaaggaagggagttttatatcacaggagagagctatggaggacattatgttcctcagctaagccaagcaattgtgaagtacaacttggcaactaaggaaaattcaattaatctgaagggctatatggtgggaaatgctctaaccgatgattaccatgatcacttgggggttttccagtttatgtggtcggctggtttgatctctgatcaaacatacaaggcgctgaaccttttttgcgatttccagtcattcatacacccgtcaaattcatgtgatagtatattagacattgctagtgcagaacttggaaacattgacccttacagcatttacactccttcttgccctgctaatgttagccagtcaaatcggctgttgaaacgaattcatgtggctggccgtatcaatgaaaagtatgatccttgcactgaggcacactcagttgtatacttcaatctacccgaggttcaaaaggcccttcatgttgatcgactccatgcaccatctaaatgggcaacatgcagtgaggtggtgtacgctacttggaaggattctcctaggacagtgctggatgtctaccgggagttgataatttcaggacttcgtatatggatgttcagtggtgatacagatgcggtaatcccagttacatctacccgatacagtatagattcccttaagcttccaactgttaaaccttggcgtccctggtatgatgatgggcaggttggaggctggactcaagaatatgctgggctgaatttcgtatcagtgaggggagcaggccatgaagtccctctgcacagacccaagctagctctcgcactcgtcaaaaacttcttgtcaggatcctcaatgccatcatcacagcttctcagtgactcttag

Protein Analysis

481

Amino Acids

53.87

Weight (kDa)

6.36

Isoelectric Point (pI)

42.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012531)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 124
Acc36I ACCTGC 1 cut(s) 1275
AccI GTMKAC 2 cut(s) 1007, 1136
AciI CCGC 1 cut(s) 1195
AclWI GGATC 3 cut(s) 973, 1403, 1416
AcoI YGGCCR 1 cut(s) 957
AcsI RAATTY 4 cut(s) 660, 825, 944, 1320
AcuI CTGAAG 1 cut(s) 694
AcyI GRCGYC 1 cut(s) 1263
AfaI GTAC 4 cut(s) 202, 559, 640, 1096
AfeI AGCGCT 1 cut(s) 547
AflII CTTAAG 1 cut(s) 1237
AgsI TTSAA 9 cut(s) 42, 174, 390, 464, 534, 665, 939, 1014, 1030
AjnI CCWGG 2 cut(s) 306, 1267
AjuI GAANNNNNNNTTGG 2 cut(s) 628, 660
AloI GAACNNNNNNTCC 2 cut(s) 593, 625
AluBI AGCT 9 cut(s) 27, 182, 223, 593, 618, 1242, 1374, 1378, 1431
AluI AGCT 9 cut(s) 27, 182, 223, 593, 618, 1242, 1374, 1378, 1431
AlwI GGATC 3 cut(s) 973, 1403, 1416
Ama87I CYCGRG 2 cut(s) 553, 1021
Aor51HI AGCGCT 1 cut(s) 547
AoxI GGCC 5 cut(s) 162, 348, 957, 1034, 1344
ApeKI GCWGC 2 cut(s) 132, 256
ApoI RAATTY 4 cut(s) 660, 825, 944, 1320
ArsI GACNNNNNNTTYG 2 cut(s) 369, 401
AseI ATTAAT 1 cut(s) 668
Asp700I GAANNNNTTC 1 cut(s) 37
AspA2I CCTAGG 1 cut(s) 1117
AspLEI GCGC 2 cut(s) 548, 783
AspS9I GGNCC 5 cut(s) 162, 264, 304, 349, 1035
AsuC2I CCSGG 2 cut(s) 161, 1141
AsuHPI GGTGA 3 cut(s) 57, 428, 1195
AsuNHI GCTAGC 1 cut(s) 1374
AvaI CYCGRG 2 cut(s) 553, 1021
AvaII GGWCC 2 cut(s) 264, 304
AvrII CCTAGG 1 cut(s) 1117
BamHI GGATCC 1 cut(s) 1408
BanII GRGCYC 1 cut(s) 234
BbsI GAAGAC 1 cut(s) 382
BbvCI CCTCAGC 2 cut(s) 260, 614
BbvI GCAGC 2 cut(s) 144, 243
BccI CCATC 8 cut(s) 44, 76, 86, 327, 364, 1071, 1273, 1428
BceAI ACGGC 1 cut(s) 944
BciT130I CCWGG 2 cut(s) 308, 1269
BclI TGATCA 2 cut(s) 717, 765
BcnI CCSGG 2 cut(s) 161, 1141
BfaI CTAG 3 cut(s) 854, 1118, 1375
BfoI RGCGCY 2 cut(s) 549, 784
BfrI CTTAAG 1 cut(s) 1237
BfuAI ACCTGC 1 cut(s) 1275
BisI GCNGC 2 cut(s) 133, 257
BlnI CCTAGG 1 cut(s) 1117
BlpI GCTNAGC 1 cut(s) 619
BlsI GCNGC 2 cut(s) 134, 258
Bme1390I CCNGG 4 cut(s) 161, 308, 1141, 1269
Bme18I GGWCC 2 cut(s) 264, 304
BmeT110I CYCGRG 2 cut(s) 553, 1021
BmgT120I GGNCC 5 cut(s) 162, 264, 304, 349, 1035
BmiI GGNNCC 2 cut(s) 266, 1410
BmrFI CCNGG 4 cut(s) 161, 308, 1141, 1269
BmrI ACTGGG 1 cut(s) 1198
BmsI GCATC 1 cut(s) 1182
BmtI GCTAGC 1 cut(s) 1378
BmuI ACTGGG 1 cut(s) 1198
BpiI GAAGAC 1 cut(s) 382
BplI GAGNNNNNCTC 2 cut(s) 982, 1014
Bpu10I CCTNAGC 2 cut(s) 260, 614
Bpu1102I GCTNAGC 1 cut(s) 619
BpuEI CTTGAG 2 cut(s) 562, 1286
BpuMI CCSGG 2 cut(s) 161, 1141
BsaBI GATNNNNATC 1 cut(s) 315
BsaHI GRCGYC 1 cut(s) 1263
BsaJI CCNNGG 4 cut(s) 1022, 1117, 1258, 1267
Bse1I ACTGG 5 cut(s) 247, 735, 804, 921, 1204
Bse3DI GCAATG 1 cut(s) 848
Bse8I GATNNNNATC 1 cut(s) 315
BseBI CCWGG 2 cut(s) 308, 1269
BseDI CCNNGG 4 cut(s) 1022, 1117, 1258, 1267
BseGI GGATG 6 cut(s) 68, 316, 338, 469, 1137, 1178
BseJI GATNNNNATC 1 cut(s) 315
BseMI GCAATG 1 cut(s) 848
BseMII CTCAG 4 cut(s) 251, 628, 980, 1013
BseNI ACTGG 5 cut(s) 247, 735, 804, 921, 1204
BseRI GAGGAG 1 cut(s) 64
BseXI GCAGC 2 cut(s) 144, 243
BseYI CCCAGC 3 cut(s) 196, 223, 1312
BsgI GTGCAG 2 cut(s) 878, 1345
Bsh1285I CGRYCG 1 cut(s) 139
BshFI GGCC 5 cut(s) 164, 350, 959, 1036, 1346
BsiEI CGRYCG 1 cut(s) 139
BsiHKCI CYCGRG 2 cut(s) 553, 1021
BsiSI CCGG 2 cut(s) 160, 1140
BslFI GGGAC 2 cut(s) 1250, 1339
BsmFI GGGAC 2 cut(s) 1250, 1339
BsnI GGCC 5 cut(s) 164, 350, 959, 1036, 1346
BsoBI CYCGRG 2 cut(s) 553, 1021
Bsp1286I GDGCHC 1 cut(s) 234
Bsp143I GATC 7 cut(s) 136, 717, 758, 765, 978, 1047, 1408
Bsp1720I GCTNAGC 1 cut(s) 619
BspACI CCGC 1 cut(s) 1195
BspANI GGCC 5 cut(s) 164, 350, 959, 1036, 1346
BspCNI CTCAG 5 cut(s) 252, 627, 981, 1012, 1448
BspLI GGNNCC 2 cut(s) 266, 1410
BspMI ACCTGC 1 cut(s) 1275
BspOI GCTAGC 1 cut(s) 1378
BspPI GGATC 3 cut(s) 973, 1403, 1416
BspTI CTTAAG 1 cut(s) 1237
BsrDI GCAATG 1 cut(s) 848
BsrI ACTGG 5 cut(s) 247, 735, 804, 921, 1204
BssECI CCNNGG 4 cut(s) 1022, 1117, 1258, 1267
BssMI GATC 7 cut(s) 136, 717, 758, 765, 978, 1047, 1408
BssNAI GTATAC 1 cut(s) 1008
BssNI GRCGYC 1 cut(s) 1263
BssT1I CCWWGG 2 cut(s) 1117, 1258
Bst1107I GTATAC 1 cut(s) 1008
Bst2UI CCWGG 2 cut(s) 308, 1269
Bst4CI ACNGT 4 cut(s) 383, 1125, 1225, 1251
Bst6I CTCTTC 1 cut(s) 241
BstACI GRCGYC 1 cut(s) 1263
BstAFI CTTAAG 1 cut(s) 1237
BstAPI GCANNNNNTGC 1 cut(s) 193
BstC8I GCNNGC 3 cut(s) 957, 1344, 1376
BstDEI CTNAG 9 cut(s) 260, 275, 614, 619, 653, 989, 999, 1435, 1445
BstF5I GGATG 6 cut(s) 68, 316, 338, 469, 1137, 1178
BstH2I RGCGCY 2 cut(s) 549, 784
BstHHI GCGC 2 cut(s) 548, 783
BstKTI GATC 7 cut(s) 139, 720, 761, 768, 981, 1050, 1411
BstMBI GATC 7 cut(s) 136, 717, 758, 765, 978, 1047, 1408
BstMCI CGRYCG 1 cut(s) 139
BstMWI GCNNNNNNNGC 2 cut(s) 193, 229
BstNI CCWGG 2 cut(s) 308, 1269
BstNSI RCATGY 1 cut(s) 1082
BstSCI CCNGG 4 cut(s) 159, 306, 1139, 1267
BstV1I GCAGC 2 cut(s) 144, 243
BstV2I GAAGAC 1 cut(s) 382
BstX2I RGATCY 1 cut(s) 1408
BstXI CCANNNNNNTGG 1 cut(s) 1070
BstYI RGATCY 1 cut(s) 1408
BstZ17I GTATAC 1 cut(s) 1008
BsuRI GGCC 5 cut(s) 164, 350, 959, 1036, 1346
BtsCI GGATG 6 cut(s) 68, 316, 338, 469, 1137, 1178
BtsI GCAGTG 1 cut(s) 1089
BtsIMutI CAGTG 7 cut(s) 379, 986, 1089, 1130, 1185, 1337, 1443
BveI ACCTGC 1 cut(s) 1275
Cac8I GCNNGC 3 cut(s) 957, 1344, 1376
CfoI GCGC 2 cut(s) 548, 783
Cfr13I GGNCC 5 cut(s) 162, 264, 304, 349, 1035
CseI GACGC 1 cut(s) 1252
Csp6I GTAC 4 cut(s) 201, 558, 639, 1095
CviAII CATG 8 cut(s) 364, 715, 830, 949, 1042, 1057, 1079, 1348
CviQI GTAC 4 cut(s) 201, 558, 639, 1095
DdeI CTNAG 9 cut(s) 260, 275, 614, 619, 653, 989, 999, 1435, 1445
DpnI GATC 7 cut(s) 138, 719, 760, 767, 980, 1049, 1410
DpnII GATC 7 cut(s) 136, 717, 758, 765, 978, 1047, 1408
DrdI GACNNNNNNGTC 1 cut(s) 124
DseDI GACNNNNNNGTC 1 cut(s) 124
EaeI YGGCCR 1 cut(s) 957
Eam1104I CTCTTC 1 cut(s) 241
EarI CTCTTC 1 cut(s) 241
Eco130I CCWWGG 2 cut(s) 1117, 1258
Eco24I GRGCYC 1 cut(s) 234
Eco47I GGWCC 2 cut(s) 264, 304
Eco47III AGCGCT 1 cut(s) 547
Eco57I CTGAAG 1 cut(s) 694
Eco88I CYCGRG 2 cut(s) 553, 1021
EcoO109I RGGNCCY 3 cut(s) 264, 304, 1035
EcoRI GAATTC 1 cut(s) 944
EcoRII CCWGG 2 cut(s) 306, 1267
EcoT14I CCWWGG 2 cut(s) 1117, 1258
EcoT38I GRGCYC 1 cut(s) 234
ErhI CCWWGG 2 cut(s) 1117, 1258
FaeI CATG 8 cut(s) 367, 718, 833, 952, 1045, 1060, 1082, 1351
FalI AAGNNNNNCTT 2 cut(s) 628, 660
FaqI GGGAC 2 cut(s) 1250, 1339
FatI CATG 8 cut(s) 363, 714, 829, 948, 1041, 1056, 1078, 1347
FbaI TGATCA 2 cut(s) 717, 765
FblI GTMKAC 2 cut(s) 1007, 1136
Fnu4HI GCNGC 2 cut(s) 133, 257
FokI GGATG 6 cut(s) 55, 323, 345, 456, 1144, 1185
FriOI GRGCYC 1 cut(s) 234
Fsp4HI GCNGC 2 cut(s) 133, 257
FspBI CTAG 3 cut(s) 854, 1118, 1375
GlaI GCGC 2 cut(s) 547, 782
GluI GCNGC 2 cut(s) 133, 257
GsaI CCCAGC 3 cut(s) 200, 227, 1316
HaeII RGCGCY 2 cut(s) 549, 784
HaeIII GGCC 5 cut(s) 164, 350, 959, 1036, 1346
HapII CCGG 2 cut(s) 160, 1140
HgaI GACGC 1 cut(s) 1252
HhaI GCGC 2 cut(s) 548, 783
Hin1I GRCGYC 1 cut(s) 1263
Hin1II CATG 8 cut(s) 367, 718, 833, 952, 1045, 1060, 1082, 1351
Hin6I GCGC 2 cut(s) 546, 781
HinP1I GCGC 2 cut(s) 546, 781
HindIII AAGCTT 1 cut(s) 1240
HinfI GANTC 9 cut(s) 390, 405, 433, 514, 1052, 1111, 1231, 1299, 1441
HpaII CCGG 2 cut(s) 160, 1140
HphI GGTGA 3 cut(s) 57, 428, 1195
Hpy166II GTNNAC 3 cut(s) 1008, 1095, 1137
Hpy188I TCNGA 5 cut(s) 32, 141, 477, 674, 765
Hpy188III TCNNGA 4 cut(s) 553, 1157, 1303, 1406
Hpy8I GTNNAC 3 cut(s) 1008, 1095, 1137
HpyAV CCTTC 6 cut(s) 180, 560, 669, 908, 1048, 1101
HpyCH4III ACNGT 4 cut(s) 383, 1125, 1225, 1251
HpyCH4IV ACGT 2 cut(s) 176, 203
HpyCH4V TGCA 6 cut(s) 187, 859, 986, 1060, 1082, 1362
HpyF10VI GCNNNNNNNGC 2 cut(s) 193, 229
HpyF3I CTNAG 9 cut(s) 260, 275, 614, 619, 653, 989, 999, 1435, 1445
HpySE526I ACGT 2 cut(s) 176, 203
Hsp92I GRCGYC 1 cut(s) 1263
Hsp92II CATG 8 cut(s) 367, 718, 833, 952, 1045, 1060, 1082, 1351
HspAI GCGC 2 cut(s) 546, 781
Ksp22I TGATCA 2 cut(s) 717, 765
Kzo9I GATC 7 cut(s) 136, 717, 758, 765, 978, 1047, 1408
LmnI GCTCC 1 cut(s) 1339
Lsp1109I GCAGC 2 cut(s) 144, 243
LweI GCATC 1 cut(s) 1182
MaeI CTAG 3 cut(s) 854, 1118, 1375
MaeII ACGT 2 cut(s) 176, 203
MaeIII GTNAC 3 cut(s) 10, 1206, 1438
MalI GATC 7 cut(s) 138, 719, 760, 767, 980, 1049, 1410
MboI GATC 7 cut(s) 136, 717, 758, 765, 978, 1047, 1408
MboII GAAGA 5 cut(s) 73, 142, 228, 229, 387
MfeI CAATTG 2 cut(s) 320, 629
MflI RGATCY 1 cut(s) 1408
MhlI GDGCHC 1 cut(s) 234
MluCI AATT 9 cut(s) 6, 320, 629, 660, 665, 825, 944, 1151, 1320
MlyI GAGTC 4 cut(s) 508, 1046, 1293, 1435
MmeI TCCRAC 3 cut(s) 423, 1269, 1270
MroXI GAANNNNTTC 1 cut(s) 37
MseI TTAA 4 cut(s) 212, 668, 1238, 1253
MslI CAYNNNNRTG 3 cut(s) 362, 368, 1068
MspCI CTTAAG 1 cut(s) 1237
MspI CCGG 2 cut(s) 160, 1140
MspR9I CCNGG 4 cut(s) 161, 308, 1141, 1269
MunI CAATTG 2 cut(s) 320, 629
MvaI CCWGG 2 cut(s) 308, 1269
MwoI GCNNNNNNNGC 2 cut(s) 193, 229
NciI CCSGG 2 cut(s) 161, 1141
NdeII GATC 7 cut(s) 136, 717, 758, 765, 978, 1047, 1408
NheI GCTAGC 1 cut(s) 1374
NlaIII CATG 8 cut(s) 367, 718, 833, 952, 1045, 1060, 1082, 1351
NlaIV GGNNCC 2 cut(s) 266, 1410
NmuCI GTSAC 1 cut(s) 1438
NspI RCATGY 1 cut(s) 1082
PdmI GAANNNNTTC 1 cut(s) 37
PfeI GAWTC 5 cut(s) 390, 405, 433, 1111, 1231
PkrI GCNGC 2 cut(s) 134, 258
Ple19I CGATCG 1 cut(s) 139
PleI GAGTC 4 cut(s) 508, 1046, 1293, 1435
PpsI GAGTC 4 cut(s) 508, 1046, 1293, 1435
PpuMI RGGWCCY 2 cut(s) 264, 304
PshBI ATTAAT 1 cut(s) 668
Psp5II RGGWCCY 2 cut(s) 264, 304
Psp6I CCWGG 2 cut(s) 306, 1267
PspFI CCCAGC 3 cut(s) 196, 223, 1312
PspGI CCWGG 2 cut(s) 306, 1267
PspN4I GGNNCC 2 cut(s) 266, 1410
PspPI GGNCC 5 cut(s) 162, 264, 304, 349, 1035
PspPPI RGGWCCY 2 cut(s) 264, 304
PsuI RGATCY 1 cut(s) 1408
PvuI CGATCG 1 cut(s) 139
RsaI GTAC 4 cut(s) 202, 559, 640, 1096
RsaNI GTAC 4 cut(s) 201, 558, 639, 1095
RseI CAYNNNNRTG 3 cut(s) 362, 368, 1068
SaqAI TTAA 4 cut(s) 212, 668, 1238, 1253
SatI GCNGC 2 cut(s) 133, 257
Sau3AI GATC 7 cut(s) 136, 717, 758, 765, 978, 1047, 1408
Sau96I GGNCC 5 cut(s) 162, 264, 304, 349, 1035
SchI GAGTC 4 cut(s) 508, 1046, 1293, 1435
ScrFI CCNGG 4 cut(s) 161, 308, 1141, 1269
SduI GDGCHC 1 cut(s) 234
SfaNI GCATC 1 cut(s) 1182
SinI GGWCC 2 cut(s) 264, 304
SmiMI CAYNNNNRTG 3 cut(s) 362, 368, 1068
SmlI CTYRAG 3 cut(s) 541, 1237, 1301
SmoI CTYRAG 3 cut(s) 541, 1237, 1301
Sse9I AATT 9 cut(s) 6, 320, 629, 660, 665, 825, 944, 1151, 1320
SsiI CCGC 1 cut(s) 1195
SspMI CTAG 3 cut(s) 854, 1118, 1375
StyD4I CCNGG 4 cut(s) 159, 306, 1139, 1267
StyI CCWWGG 2 cut(s) 1117, 1258
TaaI ACNGT 4 cut(s) 383, 1125, 1225, 1251
TaiI ACGT 2 cut(s) 179, 206
TaqI TCGA 1 cut(s) 1050
TasI AATT 9 cut(s) 6, 320, 629, 660, 665, 825, 944, 1151, 1320
TatI WGTACW 2 cut(s) 557, 638
TfiI GAWTC 5 cut(s) 390, 405, 433, 1111, 1231
Tru1I TTAA 4 cut(s) 212, 668, 1238, 1253
Tru9I TTAA 4 cut(s) 212, 668, 1238, 1253
TscAI CASTG 7 cut(s) 386, 993, 1089, 1130, 1185, 1337, 1443
TseFI GTSAC 1 cut(s) 1438
TseI GCWGC 2 cut(s) 132, 256
Tsp45I GTSAC 1 cut(s) 1438
TspRI CASTG 7 cut(s) 386, 993, 1089, 1130, 1185, 1337, 1443
Vha464I CTTAAG 1 cut(s) 1237
VpaK11BI GGWCC 2 cut(s) 264, 304
VspI ATTAAT 1 cut(s) 668
XapI RAATTY 4 cut(s) 660, 825, 944, 1320
XceI RCATGY 1 cut(s) 1082
XmaJI CCTAGG 1 cut(s) 1117
XmiI GTMKAC 2 cut(s) 1007, 1136
XmnI GAANNNNTTC 1 cut(s) 37
XspI CTAG 3 cut(s) 854, 1118, 1375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.