MD15G1148300.v1.1

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
10976972 .. 10980820
3849 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1148300.v1.1.491

Sequence Viewer

Length: 1449 bp
ATGGCGAAACCCAGATGGGATTCTGCTCTCAAAGTCTTGATCATCCTCCTCAATCTCCATCTGGGCAGTGTTTTTTCAGCTCCTCCCGCCGACCCAATTGCCCAGCAGAACTTGGACAGAGTTGCCGAGCTGCCGGGGCAGAGCTTCAACCTCAGCTTTGCCCACTTTTCTGGGTACGTCCCTGTCAATGAAGATTCCGGGAGAGCTCTCTTCTACTGGTTTGTCGAGGCTGCCGAGGACCCTCACTCCAAGCCCGTTGTTCTCTGGCTTAATGGAGGACCTGGATGCTCATCCATTGCGTATGGTATGGCGGAAGAAATTGGCCCGTTTCATATCGAGGCAGACGGGAAGACCCTGTATTTGAACCCTTACTCTTGGAATCAAGTTGCTAACGTTCTATTTTTCGACTCACCTGTTGGAGTTGGGTTTTCTTATTCGAACACTTCTTCTGATTTGCTATCCAATGGAGATAAAAGGACGGCCAATGATTCTCTAACATTTCTATTGCAATGGTTTGAGCGCTTTCCCCAGTACAAGGGAAGAGACTTTTACATTACAGGAGAGAGCTATGGAGGACATTATGTTCCTCAGCTGAGTCAAGCAATTGTAAAGTACAACTTCAAAACTAAGGAAAAAACAGTTAATCTGAAGGGTTATATGGTGGGAAATGCTCTAACCGATGATTACCATGATCACTTAGGCGTTTTCCAATTTATGTGGTCGGCTGGTTTGATTTCCGATCAAACTTACAAGTTGCTGAACCTTCTGTGTGACTTCCAGTCATTTATACACACCTCAAATTCATGTGATAATGCTCTTGACATTGCTAATGCGGAACTTGGAAACATTGACCCTTACAGCATCTACACTCCTTCATGCCCTGCTAATGTTAGCCAGTCAAATGGGCTGCGGAAACGAAGGAATACAGTCGGCCACATCAGTCAGAAATATGATCCTTGCACCGAGGCACACTCAGTTGTATACTTCAATCTACCCGAGGTTCAAAAGGCACTTCACGTTGATCCAGGTCACGCACCATCTAAATGGGCAACATGCAGTGATGTGGTAAGTATGACTTGGAAGGATTCTCCTAGGACAGTGCTGGACGTTTACAAGGAGCTGATACATTCAGGACTGCGTATATGGATGTTCAGTGGTGATAATGACGCTGTAATCCCAATTACATCTACCCGATACAGTATAGATGCTCTTAAGCTTCCAACTGTCAAACCTTGGCGTGCATGGTACGATGATGGGCAGGTTGGAGGATGGACACAAGAATATGCCGGGCTGACATTTGTGTCAGTGAGGGGAGCAGGCCATGAAGTTCCTCTGCACAAACCCAAGCAAGCTCTCACACTCATCAAATCCTTCTTGTCAGGATCTTCAATGCCAGCGTCCGAACAACTTATCATGCCAGCATCCGAACAACTTATCAGCGACTCTTGA

Protein Analysis

483

Amino Acids

53.58

Weight (kDa)

5.74

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 45 - 461 6e-150 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012531)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1300
Acc36I ACCTGC 1 cut(s) 1249
AccI GTMKAC 1 cut(s) 981
AciI CCGC 4 cut(s) 87, 311, 833, 910
AclI AACGTT 1 cut(s) 393
AclWI GGATC 3 cut(s) 947, 1016, 1390
AcoI YGGCCR 2 cut(s) 480, 931
AcsI RAATTY 1 cut(s) 799
AcuI CTGAAG 1 cut(s) 668
AfaI GTAC 4 cut(s) 176, 533, 614, 1247
AfeI AGCGCT 1 cut(s) 521
AfiI CCNNNNNNNGG 1 cut(s) 535
AflII CTTAAG 1 cut(s) 1211
AgsI TTSAA 6 cut(s) 148, 364, 622, 988, 1004, 1389
AhdI GACNNNNNGTC 1 cut(s) 778
AjnI CCWGG 2 cut(s) 280, 1024
AloI GAACNNNNNNTCC 2 cut(s) 567, 599
Alw21I GWGCWC 1 cut(s) 208
Alw26I GTCTC 1 cut(s) 537
AlwI GGATC 3 cut(s) 947, 1016, 1390
Ama87I CYCGRG 1 cut(s) 995
Aor51HI AGCGCT 1 cut(s) 521
AoxI GGCC 4 cut(s) 322, 480, 931, 1318
ApeKI GCWGC 3 cut(s) 130, 230, 907
ApoI RAATTY 1 cut(s) 799
ArsI GACNNNNNNTTYG 2 cut(s) 343, 375
AspA2I CCTAGG 1 cut(s) 1091
AspLEI GCGC 1 cut(s) 522
AspS9I GGNCC 3 cut(s) 238, 278, 323
AsuC2I CCSGG 3 cut(s) 135, 199, 1288
AsuHPI GGTGA 2 cut(s) 402, 1169
AsuII TTCGAA 1 cut(s) 437
AvaI CYCGRG 1 cut(s) 995
AvaII GGWCC 2 cut(s) 238, 278
AvrII CCTAGG 1 cut(s) 1091
BanII GRGCYC 1 cut(s) 208
BbsI GAAGAC 1 cut(s) 356
Bbv12I GWGCWC 1 cut(s) 208
BbvCI CCTCAGC 2 cut(s) 152, 588
BbvI GCAGC 3 cut(s) 117, 217, 894
BccI CCATC 5 cut(s) 9, 66, 1045, 1247, 1263
BceAI ACGGC 1 cut(s) 495
BcgI CGANNNNNNTGC 2 cut(s) 80, 114
BciT130I CCWGG 2 cut(s) 282, 1026
BclI TGATCA 2 cut(s) 39, 691
BcnI CCSGG 3 cut(s) 135, 199, 1288
BcoDI GTCTC 1 cut(s) 537
BfaI CTAG 1 cut(s) 1092
BfoI RGCGCY 1 cut(s) 523
BfrI CTTAAG 1 cut(s) 1211
BfuAI ACCTGC 1 cut(s) 1249
BisI GCNGC 3 cut(s) 131, 231, 908
BlnI CCTAGG 1 cut(s) 1091
BlsI GCNGC 3 cut(s) 132, 232, 909
Bme1390I CCNGG 5 cut(s) 135, 199, 282, 1026, 1288
Bme18I GGWCC 2 cut(s) 238, 278
BmeRI GACNNNNNGTC 1 cut(s) 778
BmeT110I CYCGRG 1 cut(s) 995
BmgT120I GGNCC 3 cut(s) 238, 278, 323
BmiI GGNNCC 1 cut(s) 240
BmrFI CCNGG 5 cut(s) 135, 199, 282, 1026, 1288
BmrI ACTGGG 1 cut(s) 523
BmsI GCATC 4 cut(s) 275, 870, 1195, 1430
BmuI ACTGGG 1 cut(s) 523
BpiI GAAGAC 1 cut(s) 356
BplI GAGNNNNNCTC 2 cut(s) 956, 988
Bpu10I CCTNAGC 2 cut(s) 152, 588
Bpu14I TTCGAA 1 cut(s) 437
BpuMI CCSGG 3 cut(s) 135, 199, 1288
BsaBI GATNNNNATC 1 cut(s) 289
BsaJI CCNNGG 6 cut(s) 134, 234, 963, 996, 1091, 1232
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 1 cut(s) 535
Bse1I ACTGG 4 cut(s) 221, 529, 778, 895
Bse3DI GCAATG 3 cut(s) 294, 515, 822
Bse8I GATNNNNATC 1 cut(s) 289
BseBI CCWGG 2 cut(s) 282, 1026
BseDI CCNNGG 6 cut(s) 134, 234, 963, 996, 1091, 1232
BseGI GGATG 6 cut(s) 42, 290, 290, 1152, 1274, 1421
BseJI GATNNNNATC 1 cut(s) 289
BseLI CCNNNNNNNGG 1 cut(s) 535
BseMI GCAATG 3 cut(s) 294, 515, 822
BseMII CTCAG 4 cut(s) 166, 584, 602, 987
BseNI ACTGG 4 cut(s) 221, 529, 778, 895
BseRI GAGGAG 2 cut(s) 38, 72
BseXI GCAGC 3 cut(s) 117, 217, 894
BseYI CCCAGC 1 cut(s) 102
BsgI GTGCAG 1 cut(s) 1319
BshFI GGCC 4 cut(s) 324, 482, 933, 1320
BsiHKAI GWGCWC 1 cut(s) 208
BsiHKCI CYCGRG 1 cut(s) 995
BsiSI CCGG 3 cut(s) 134, 198, 1287
BslFI GGGAC 1 cut(s) 164
BslI CCNNNNNNNGG 1 cut(s) 535
BsmAI GTCTC 1 cut(s) 537
BsmFI GGGAC 1 cut(s) 164
BsnI GGCC 4 cut(s) 324, 482, 933, 1320
BsoBI CYCGRG 1 cut(s) 995
Bsp119I TTCGAA 1 cut(s) 437
Bsp1286I GDGCHC 1 cut(s) 208
Bsp143I GATC 6 cut(s) 39, 691, 739, 952, 1021, 1382
BspACI CCGC 4 cut(s) 87, 311, 833, 910
BspANI GGCC 4 cut(s) 324, 482, 933, 1320
BspCNI CTCAG 4 cut(s) 165, 585, 601, 986
BspLI GGNNCC 1 cut(s) 240
BspMI ACCTGC 1 cut(s) 1249
BspPI GGATC 3 cut(s) 947, 1016, 1390
BspT104I TTCGAA 1 cut(s) 437
BspTI CTTAAG 1 cut(s) 1211
BsrDI GCAATG 3 cut(s) 294, 515, 822
BsrI ACTGG 4 cut(s) 221, 529, 778, 895
BssECI CCNNGG 6 cut(s) 134, 234, 963, 996, 1091, 1232
BssMI GATC 6 cut(s) 39, 691, 739, 952, 1021, 1382
BssNAI GTATAC 1 cut(s) 982
BssT1I CCWWGG 2 cut(s) 1091, 1232
Bst1107I GTATAC 1 cut(s) 982
Bst2UI CCWGG 2 cut(s) 282, 1026
Bst4CI ACNGT 5 cut(s) 640, 928, 1099, 1199, 1225
Bst6I CTCTTC 2 cut(s) 215, 535
BstAFI CTTAAG 1 cut(s) 1211
BstBI TTCGAA 1 cut(s) 437
BstC8I GCNNGC 5 cut(s) 1239, 1318, 1350, 1395, 1419
BstDEI CTNAG 6 cut(s) 152, 588, 593, 627, 697, 973
BstF5I GGATG 6 cut(s) 42, 290, 290, 1152, 1274, 1421
BstH2I RGCGCY 1 cut(s) 523
BstHHI GCGC 1 cut(s) 522
BstKTI GATC 6 cut(s) 42, 694, 742, 955, 1024, 1385
BstMAI GTCTC 1 cut(s) 537
BstMBI GATC 6 cut(s) 39, 691, 739, 952, 1021, 1382
BstMWI GCNNNNNNNGC 2 cut(s) 86, 136
BstNI CCWGG 2 cut(s) 282, 1026
BstNSI RCATGY 1 cut(s) 1056
BstSCI CCNGG 5 cut(s) 133, 197, 280, 1024, 1286
BstV1I GCAGC 3 cut(s) 117, 217, 894
BstV2I GAAGAC 1 cut(s) 356
BstX2I RGATCY 1 cut(s) 1382
BstXI CCANNNNNNTGG 3 cut(s) 170, 902, 1044
BstYI RGATCY 1 cut(s) 1382
BstZ17I GTATAC 1 cut(s) 982
BsuRI GGCC 4 cut(s) 324, 482, 933, 1320
BtsCI GGATG 6 cut(s) 42, 290, 290, 1152, 1274, 1421
BtsI GCAGTG 2 cut(s) 73, 1063
BtsIMutI CAGTG 5 cut(s) 73, 1063, 1104, 1159, 1311
BveI ACCTGC 1 cut(s) 1249
Cac8I GCNNGC 5 cut(s) 1239, 1318, 1350, 1395, 1419
CfoI GCGC 1 cut(s) 522
Cfr13I GGNCC 3 cut(s) 238, 278, 323
CseI GACGC 2 cut(s) 1175, 1386
Csp6I GTAC 4 cut(s) 175, 532, 613, 1246
CspCI CAANNNNNGTGG 2 cut(s) 698, 733
CviAII CATG 7 cut(s) 689, 804, 876, 1053, 1242, 1322, 1414
CviQI GTAC 4 cut(s) 175, 532, 613, 1246
DdeI CTNAG 6 cut(s) 152, 588, 593, 627, 697, 973
DpnI GATC 6 cut(s) 41, 693, 741, 954, 1023, 1384
DpnII GATC 6 cut(s) 39, 691, 739, 952, 1021, 1382
DrdI GACNNNNNNGTC 1 cut(s) 1300
DriI GACNNNNNGTC 1 cut(s) 778
DseDI GACNNNNNNGTC 1 cut(s) 1300
EaeI YGGCCR 2 cut(s) 480, 931
Eam1104I CTCTTC 2 cut(s) 215, 535
Eam1105I GACNNNNNGTC 1 cut(s) 778
EarI CTCTTC 2 cut(s) 215, 535
EciI GGCGGA 1 cut(s) 326
Ecl136II GAGCTC 1 cut(s) 206
Eco130I CCWWGG 2 cut(s) 1091, 1232
Eco24I GRGCYC 1 cut(s) 208
Eco47I GGWCC 2 cut(s) 238, 278
Eco47III AGCGCT 1 cut(s) 521
Eco53kI GAGCTC 1 cut(s) 206
Eco57I CTGAAG 1 cut(s) 668
Eco88I CYCGRG 1 cut(s) 995
EcoICRI GAGCTC 1 cut(s) 206
EcoO109I RGGNCCY 2 cut(s) 238, 278
EcoRII CCWGG 2 cut(s) 280, 1024
EcoT14I CCWWGG 2 cut(s) 1091, 1232
EcoT38I GRGCYC 1 cut(s) 208
ErhI CCWWGG 2 cut(s) 1091, 1232
FaeI CATG 7 cut(s) 692, 807, 879, 1056, 1245, 1325, 1417
FalI AAGNNNNNCTT 4 cut(s) 602, 634, 1060, 1092
FaqI GGGAC 1 cut(s) 164
FatI CATG 7 cut(s) 688, 803, 875, 1052, 1241, 1321, 1413
FauI CCCGC 1 cut(s) 94
FbaI TGATCA 2 cut(s) 39, 691
FblI GTMKAC 1 cut(s) 981
Fnu4HI GCNGC 3 cut(s) 131, 231, 908
FokI GGATG 6 cut(s) 29, 277, 297, 1159, 1281, 1408
FriOI GRGCYC 1 cut(s) 208
Fsp4HI GCNGC 3 cut(s) 131, 231, 908
FspBI CTAG 1 cut(s) 1092
GlaI GCGC 1 cut(s) 521
GluI GCNGC 3 cut(s) 131, 231, 908
GsaI CCCAGC 1 cut(s) 106
HaeII RGCGCY 1 cut(s) 523
HaeIII GGCC 4 cut(s) 324, 482, 933, 1320
HapII CCGG 3 cut(s) 134, 198, 1287
HgaI GACGC 2 cut(s) 1175, 1386
HhaI GCGC 1 cut(s) 522
Hin1II CATG 7 cut(s) 692, 807, 879, 1056, 1245, 1325, 1417
Hin6I GCGC 1 cut(s) 520
HinP1I GCGC 1 cut(s) 520
HindIII AAGCTT 1 cut(s) 1214
HinfI GANTC 8 cut(s) 20, 194, 379, 407, 488, 595, 1085, 1442
HpaII CCGG 3 cut(s) 134, 198, 1287
HphI GGTGA 2 cut(s) 402, 1169
Hpy166II GTNNAC 2 cut(s) 982, 1111
Hpy188I TCNGA 6 cut(s) 451, 648, 739, 945, 1402, 1426
Hpy188III TCNNGA 5 cut(s) 37, 818, 1131, 1380, 1446
Hpy8I GTNNAC 2 cut(s) 982, 1111
HpyAV CCTTC 6 cut(s) 643, 773, 882, 912, 1075, 1381
HpyCH4III ACNGT 5 cut(s) 640, 928, 1099, 1199, 1225
HpyCH4IV ACGT 4 cut(s) 177, 393, 1017, 1107
HpyCH4V TGCA 5 cut(s) 508, 960, 1056, 1241, 1336
HpyF10VI GCNNNNNNNGC 2 cut(s) 86, 136
HpyF3I CTNAG 6 cut(s) 152, 588, 593, 627, 697, 973
HpySE526I ACGT 4 cut(s) 177, 393, 1017, 1107
Hsp92II CATG 7 cut(s) 692, 807, 879, 1056, 1245, 1325, 1417
HspAI GCGC 1 cut(s) 520
Ksp22I TGATCA 2 cut(s) 39, 691
Kzo9I GATC 6 cut(s) 39, 691, 739, 952, 1021, 1382
LmnI GCTCC 3 cut(s) 85, 1117, 1313
Lsp1109I GCAGC 3 cut(s) 117, 217, 894
LweI GCATC 4 cut(s) 275, 870, 1195, 1430
MaeI CTAG 1 cut(s) 1092
MaeII ACGT 4 cut(s) 177, 393, 1017, 1107
MaeIII GTNAC 2 cut(s) 770, 1028
MalI GATC 6 cut(s) 41, 693, 741, 954, 1023, 1384
MboI GATC 6 cut(s) 39, 691, 739, 952, 1021, 1382
MboII GAAGA 7 cut(s) 202, 203, 326, 361, 438, 552, 1377
MfeI CAATTG 2 cut(s) 96, 603
MflI RGATCY 1 cut(s) 1382
MhlI GDGCHC 1 cut(s) 208
MluCI AATT 6 cut(s) 96, 318, 603, 710, 799, 1179
MlyI GAGTC 3 cut(s) 401, 604, 1436
MmeI TCCRAC 3 cut(s) 397, 1243, 1244
MseI TTAA 3 cut(s) 270, 642, 1212
MslI CAYNNNNRTG 1 cut(s) 1042
MspA1I CMGCKG 1 cut(s) 592
MspCI CTTAAG 1 cut(s) 1211
MspI CCGG 3 cut(s) 134, 198, 1287
MspR9I CCNGG 5 cut(s) 135, 199, 282, 1026, 1288
MunI CAATTG 2 cut(s) 96, 603
MvaI CCWGG 2 cut(s) 282, 1026
MwoI GCNNNNNNNGC 2 cut(s) 86, 136
NciI CCSGG 3 cut(s) 135, 199, 1288
NdeII GATC 6 cut(s) 39, 691, 739, 952, 1021, 1382
NlaIII CATG 7 cut(s) 692, 807, 879, 1056, 1245, 1325, 1417
NlaIV GGNNCC 1 cut(s) 240
NmeAIII GCCGAG 2 cut(s) 151, 259
NmuCI GTSAC 2 cut(s) 770, 1028
NspI RCATGY 1 cut(s) 1056
NspV TTCGAA 1 cut(s) 437
PcsI WCGNNNNNNNCGW 1 cut(s) 231
PfeI GAWTC 5 cut(s) 20, 194, 379, 488, 1085
PfoI TCCNGGA 1 cut(s) 197
PkrI GCNGC 3 cut(s) 132, 232, 909
PleI GAGTC 3 cut(s) 401, 603, 1436
PpsI GAGTC 3 cut(s) 401, 603, 1436
PpuMI RGGWCCY 2 cut(s) 238, 278
Psp124BI GAGCTC 1 cut(s) 208
Psp1406I AACGTT 1 cut(s) 393
Psp5II RGGWCCY 2 cut(s) 238, 278
Psp6I CCWGG 2 cut(s) 280, 1024
PspFI CCCAGC 1 cut(s) 102
PspGI CCWGG 2 cut(s) 280, 1024
PspN4I GGNNCC 1 cut(s) 240
PspPI GGNCC 3 cut(s) 238, 278, 323
PspPPI RGGWCCY 2 cut(s) 238, 278
PsuI RGATCY 1 cut(s) 1382
PvuII CAGCTG 1 cut(s) 592
RsaI GTAC 4 cut(s) 176, 533, 614, 1247
RsaNI GTAC 4 cut(s) 175, 532, 613, 1246
RseI CAYNNNNRTG 1 cut(s) 1042
SacI GAGCTC 1 cut(s) 208
SaqAI TTAA 3 cut(s) 270, 642, 1212
SatI GCNGC 3 cut(s) 131, 231, 908
Sau3AI GATC 6 cut(s) 39, 691, 739, 952, 1021, 1382
Sau96I GGNCC 3 cut(s) 238, 278, 323
SchI GAGTC 3 cut(s) 401, 604, 1436
ScrFI CCNGG 5 cut(s) 135, 199, 282, 1026, 1288
SduI GDGCHC 1 cut(s) 208
SfaNI GCATC 4 cut(s) 275, 870, 1195, 1430
SfuI TTCGAA 1 cut(s) 437
SinI GGWCC 2 cut(s) 238, 278
SmiMI CAYNNNNRTG 1 cut(s) 1042
SmlI CTYRAG 1 cut(s) 1211
SmoI CTYRAG 1 cut(s) 1211
Sse9I AATT 6 cut(s) 96, 318, 603, 710, 799, 1179
SsiI CCGC 4 cut(s) 87, 311, 833, 910
SspMI CTAG 1 cut(s) 1092
SstI GAGCTC 1 cut(s) 208
StyD4I CCNGG 5 cut(s) 133, 197, 280, 1024, 1286
StyI CCWWGG 2 cut(s) 1091, 1232
TaaI ACNGT 5 cut(s) 640, 928, 1099, 1199, 1225
TaiI ACGT 4 cut(s) 180, 396, 1020, 1110
TaqI TCGA 4 cut(s) 225, 336, 405, 437
TasI AATT 6 cut(s) 96, 318, 603, 710, 799, 1179
TatI WGTACW 2 cut(s) 531, 612
TfiI GAWTC 5 cut(s) 20, 194, 379, 488, 1085
Tru1I TTAA 3 cut(s) 270, 642, 1212
Tru9I TTAA 3 cut(s) 270, 642, 1212
TscAI CASTG 5 cut(s) 73, 1063, 1104, 1159, 1311
TseFI GTSAC 2 cut(s) 770, 1028
TseI GCWGC 3 cut(s) 130, 230, 907
Tsp45I GTSAC 2 cut(s) 770, 1028
TspDTI ATGAA 5 cut(s) 204, 320, 792, 864, 1338
TspRI CASTG 5 cut(s) 73, 1063, 1104, 1159, 1311
Vha464I CTTAAG 1 cut(s) 1211
VpaK11BI GGWCC 2 cut(s) 238, 278
XapI RAATTY 1 cut(s) 799
XceI RCATGY 1 cut(s) 1056
XmaJI CCTAGG 1 cut(s) 1091
XmiI GTMKAC 1 cut(s) 981
XspI CTAG 1 cut(s) 1092
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.