AT5G01020
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
5917 .. 8467
2551 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G01020.1

Sequence Viewer

Length: 1233 bp
ATGGGCAACTGCGGTACTAGAGACGAGGCTGCCGTCTTCACTCCTCAAGCTCAAGCCCAACAGCTCCAGAAGAAGCACTCCCGATCCGTCTCAGATCTGAGCGATCCATCCACTCCTCGCTTCCGAGACGACTCTCGCACTCCTATTTCGTATGCCCAAGTCATCCCCTTTACTTTGTTTGAGCTTGAGACCATCACCAAGAGCTTCCGCCCAGATTATATACTCGGAGAAGGTGGTTTCGGTACCGTCTACAAGGGTTACATTGATGACAATCTCCGCGTCGGCCTCAAGTCTCTCCCTGTTGCCGTCAAGGTCCTTAACAAGGAGGGACTCCAGGGTCACCGTGAATGGCTTACAGAGGTCAACTTCCTCGGCCAACTCCGTCATCCCAACCTCGTCAAGCTTATTGGTTACTGCTGCGAGGACGATCACCGATTACTTGTTTATGAGTTCATGCTGCGAGGCAGTCTTGAGAATCACCTATTTCGAAAAACCACAGCTCCGCTATCTTGGTCTAGAAGGATGATGATTGCTCTTGGAGCTGCGAAAGGCCTTGCTTTCCTCCACAATGCTGAAAGACCGGTTATTTATAGGGATTTCAAGACTTCCAATATACTGCTTGACTCCGACTACACCGCCAAGCTTTCAGATTTTGGCTTAGCTAAAGCTGGACCCCAGGGTGATGAAACCCATGTATCAACTCGAGTTATGGGTACTTATGGCTATGCTGCCCCAGAATATGTGATGACTGGACACTTGACGGCCAGAAGTGATGTATACAGCTTTGGAGTTGTTCTTCTAGAGATGTTGACAGGAAGAAAATCAGTGGATAAGACAAGACCTAGCAAAGAGCAGAACTTGGTTGATTGGGCTCGGCCAAAGCTGAATGATAAAAGAAAACTGCTGCAGATAATTGACCCAAGACTGGAGAACCAATACTCTGTCAGGGCAGCTCAGAAGGCATGCAGCTTGGCGTATTATTGTCTTAGCCAGAACCCGAAAGCTAGGCCATTGATGAGCGATGTGGTTGAGACTTTGGAACCTTTGCAGTGTACTGGTGATGCCCTGATCCCTTGTGCAACTACTACAGCTGGAGCTGCATTTGCAATGGGAGGGGTGCCTGATTACAGAATGCACCGGAGGTTTGCAAAGAACGTTGGGCCAGGTGCAATTTGCCGGTCACCCAATCCAAATTATTCACCGGGTGGACCTGCAGCATGCAGAGTTCGGTGA

Protein Analysis

410

Amino Acids

45.62

Weight (kDa)

9.21

Isoelectric Point (pI)

36.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 74 - 346 9.3e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 74 - 344 2.2e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010958)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 336
Acc36I ACCTGC 1 cut(s) 1219
Acc65I GGTACC 1 cut(s) 242
AccB1I GGYRCC 2 cut(s) 242, 1117
AccI GTMKAC 2 cut(s) 249, 777
AccII CGCG 1 cut(s) 279
AciI CCGC 5 cut(s) 12, 208, 277, 503, 636
AclI AACGTT 1 cut(s) 1155
AclWI GGATC 3 cut(s) 78, 98, 1063
AcoI YGGCCR 3 cut(s) 373, 762, 875
AdeI CACNNNGTG 1 cut(s) 1205
AfaI GTAC 4 cut(s) 16, 244, 715, 1054
AfiI CCNNNNNNNGG 2 cut(s) 322, 925
AgeI ACCGGT 1 cut(s) 580
AgsI TTSAA 1 cut(s) 601
AjnI CCWGG 3 cut(s) 333, 675, 1162
Alw26I GTCTC 6 cut(s) 15, 94, 120, 182, 297, 1025
AlwI GGATC 3 cut(s) 78, 98, 1063
Ama87I CYCGRG 1 cut(s) 702
AoxI GGCC 7 cut(s) 283, 373, 550, 762, 875, 1007, 1160
AsiGI ACCGGT 1 cut(s) 580
Asp718I GGTACC 1 cut(s) 242
AspS9I GGNCC 4 cut(s) 313, 671, 1160, 1208
AsuC2I CCSGG 1 cut(s) 1203
AsuHPI GGTGA 8 cut(s) 187, 332, 422, 470, 692, 1070, 1173, 1191
AsuII TTCGAA 1 cut(s) 487
AvaI CYCGRG 1 cut(s) 702
AvaII GGWCC 3 cut(s) 313, 671, 1208
BaeI ACNNNNGTAYC 2 cut(s) 678, 711
BanI GGYRCC 2 cut(s) 242, 1117
BanII GRGCYC 1 cut(s) 874
BbsI GAAGAC 1 cut(s) 28
BccI CCATC 2 cut(s) 115, 200
BceAI ACGGC 3 cut(s) 17, 290, 777
BciT130I CCWGG 3 cut(s) 335, 677, 1164
BcnI CCSGG 1 cut(s) 1203
BcoDI GTCTC 6 cut(s) 15, 94, 120, 182, 297, 1025
BfaI CTAG 5 cut(s) 18, 516, 800, 843, 1005
BfmI CTRYAG 3 cut(s) 905, 1086, 1212
BfuAI ACCTGC 1 cut(s) 1219
BglII AGATCT 1 cut(s) 94
BlpI GCTNAGC 1 cut(s) 658
Bme1390I CCNGG 4 cut(s) 335, 677, 1164, 1203
Bme18I GGWCC 3 cut(s) 313, 671, 1208
BmeT110I CYCGRG 1 cut(s) 702
BmgT120I GGNCC 4 cut(s) 313, 671, 1160, 1208
BmiI GGNNCC 4 cut(s) 244, 673, 1041, 1119
BmrFI CCNGG 4 cut(s) 335, 677, 1164, 1203
BmsI GCATC 1 cut(s) 1051
BpiI GAAGAC 1 cut(s) 28
BpmI CTGGAG 4 cut(s) 50, 317, 947, 1113
Bpu1102I GCTNAGC 1 cut(s) 658
Bpu14I TTCGAA 1 cut(s) 487
BpuEI CTTGAG 5 cut(s) 30, 36, 206, 272, 491
BpuMI CCSGG 1 cut(s) 1203
BsaBI GATNNNNATC 1 cut(s) 270
BsaI GGTCTC 1 cut(s) 182
BsaJI CCNNGG 4 cut(s) 334, 370, 675, 676
BsaWI WCCGGW 2 cut(s) 580, 1137
BsaXI ACNNNNNCTCC 2 cut(s) 484, 514
Bsc4I CCNNNNNNNGG 2 cut(s) 322, 925
Bse118I RCCGGY 2 cut(s) 580, 1176
Bse1I ACTGG 3 cut(s) 754, 930, 1060
Bse3DI GCAATG 1 cut(s) 1113
Bse8I GATNNNNATC 1 cut(s) 270
BseBI CCWGG 3 cut(s) 335, 677, 1164
BseDI CCNNGG 4 cut(s) 334, 370, 675, 676
BseGI GGATG 4 cut(s) 107, 162, 385, 528
BseJI GATNNNNATC 1 cut(s) 270
BseLI CCNNNNNNNGG 2 cut(s) 322, 925
BseMI GCAATG 1 cut(s) 1113
BseMII CTCAG 3 cut(s) 89, 105, 968
BseNI ACTGG 3 cut(s) 754, 930, 1060
BseRI GAGGAG 2 cut(s) 33, 105
Bsh1236I CGCG 1 cut(s) 279
BshFI GGCC 7 cut(s) 285, 375, 552, 764, 877, 1009, 1162
BshNI GGYRCC 2 cut(s) 242, 1117
BshTI ACCGGT 1 cut(s) 580
BsiHKCI CYCGRG 1 cut(s) 702
BsiSI CCGG 4 cut(s) 581, 1138, 1177, 1202
BslFI GGGAC 1 cut(s) 342
BslI CCNNNNNNNGG 2 cut(s) 322, 925
BsmAI GTCTC 6 cut(s) 15, 94, 120, 182, 297, 1025
BsmBI CGTCTC 3 cut(s) 15, 94, 120
BsmFI GGGAC 1 cut(s) 342
BsmI GAATGC 1 cut(s) 1137
BsnI GGCC 7 cut(s) 285, 375, 552, 764, 877, 1009, 1162
Bso31I GGTCTC 1 cut(s) 182
BsoBI CYCGRG 1 cut(s) 702
Bsp119I TTCGAA 1 cut(s) 487
Bsp1286I GDGCHC 1 cut(s) 874
Bsp143I GATC 5 cut(s) 83, 94, 103, 427, 1068
Bsp1720I GCTNAGC 1 cut(s) 658
BspACI CCGC 5 cut(s) 12, 208, 277, 503, 636
BspANI GGCC 7 cut(s) 285, 375, 552, 764, 877, 1009, 1162
BspCNI CTCAG 3 cut(s) 90, 104, 967
BspFNI CGCG 1 cut(s) 279
BspLI GGNNCC 4 cut(s) 244, 673, 1041, 1119
BspMAI CTGCAG 2 cut(s) 909, 1216
BspMI ACCTGC 1 cut(s) 1219
BspPI GGATC 3 cut(s) 78, 98, 1063
BspT104I TTCGAA 1 cut(s) 487
BspT107I GGYRCC 2 cut(s) 242, 1117
BspTNI GGTCTC 1 cut(s) 182
BsrDI GCAATG 1 cut(s) 1113
BsrFI RCCGGY 2 cut(s) 580, 1176
BsrI ACTGG 3 cut(s) 754, 930, 1060
BssAI RCCGGY 2 cut(s) 580, 1176
BssECI CCNNGG 4 cut(s) 334, 370, 675, 676
BssMI GATC 5 cut(s) 83, 94, 103, 427, 1068
BssNAI GTATAC 1 cut(s) 778
Bst1107I GTATAC 1 cut(s) 778
Bst2UI CCWGG 3 cut(s) 335, 677, 1164
Bst4CI ACNGT 2 cut(s) 247, 344
BstBI TTCGAA 1 cut(s) 487
BstC8I GCNNGC 2 cut(s) 964, 1219
BstDEI CTNAG 5 cut(s) 91, 98, 658, 954, 986
BstEII GGTNACC 2 cut(s) 338, 1179
BstENI CCTNNNNNAGG 1 cut(s) 320
BstF5I GGATG 4 cut(s) 107, 162, 385, 528
BstFNI CGCG 1 cut(s) 279
BstKTI GATC 5 cut(s) 86, 97, 106, 430, 1071
BstMAI GTCTC 6 cut(s) 15, 94, 120, 182, 297, 1025
BstMBI GATC 5 cut(s) 83, 94, 103, 427, 1068
BstMWI GCNNNNNNNGC 4 cut(s) 539, 959, 1097, 1103
BstNI CCWGG 3 cut(s) 335, 677, 1164
BstNSI RCATGY 2 cut(s) 966, 1221
BstPI GGTNACC 2 cut(s) 338, 1179
BstSCI CCNGG 4 cut(s) 333, 675, 1162, 1201
BstSFI CTRYAG 3 cut(s) 905, 1086, 1212
BstUI CGCG 1 cut(s) 279
BstV2I GAAGAC 1 cut(s) 28
BstX2I RGATCY 1 cut(s) 94
BstYI RGATCY 1 cut(s) 94
BstZ17I GTATAC 1 cut(s) 778
BsuRI GGCC 7 cut(s) 285, 375, 552, 764, 877, 1009, 1162
BtgZI GCGATG 1 cut(s) 1035
BtsCI GGATG 4 cut(s) 107, 162, 385, 528
BtsI GCAGTG 1 cut(s) 1055
BtsIMutI CAGTG 2 cut(s) 831, 1055
BveI ACCTGC 1 cut(s) 1219
Cac8I GCNNGC 2 cut(s) 964, 1219
Cfr10I RCCGGY 2 cut(s) 580, 1176
Cfr13I GGNCC 4 cut(s) 313, 671, 1160, 1208
CseI GACGC 1 cut(s) 268
Csp6I GTAC 4 cut(s) 15, 243, 714, 1053
CspAI ACCGGT 1 cut(s) 580
CviAII CATG 4 cut(s) 454, 692, 963, 1218
CviQI GTAC 4 cut(s) 15, 243, 714, 1053
DdeI CTNAG 5 cut(s) 91, 98, 658, 954, 986
DpnI GATC 5 cut(s) 85, 96, 105, 429, 1070
DpnII GATC 5 cut(s) 83, 94, 103, 427, 1068
DraIII CACNNNGTG 1 cut(s) 1205
DrdI GACNNNNNNGTC 1 cut(s) 336
DseDI GACNNNNNNGTC 1 cut(s) 336
EaeI YGGCCR 3 cut(s) 373, 762, 875
EciI GGCGGA 1 cut(s) 197
Eco147I AGGCCT 1 cut(s) 552
Eco24I GRGCYC 1 cut(s) 874
Eco31I GGTCTC 1 cut(s) 182
Eco47I GGWCC 3 cut(s) 313, 671, 1208
Eco88I CYCGRG 1 cut(s) 702
Eco91I GGTNACC 2 cut(s) 338, 1179
EcoNI CCTNNNNNAGG 1 cut(s) 320
EcoO109I RGGNCCY 1 cut(s) 313
EcoO65I GGTNACC 2 cut(s) 338, 1179
EcoRII CCWGG 3 cut(s) 333, 675, 1162
EcoT38I GRGCYC 1 cut(s) 874
Esp3I CGTCTC 3 cut(s) 15, 94, 120
FaeI CATG 4 cut(s) 457, 695, 966, 1221
FaqI GGGAC 1 cut(s) 342
FatI CATG 4 cut(s) 453, 691, 962, 1217
FblI GTMKAC 2 cut(s) 249, 777
FokI GGATG 4 cut(s) 94, 149, 372, 535
FriOI GRGCYC 1 cut(s) 874
FspBI CTAG 5 cut(s) 18, 516, 800, 843, 1005
GsuI CTGGAG 4 cut(s) 50, 317, 947, 1113
HaeIII GGCC 7 cut(s) 285, 375, 552, 764, 877, 1009, 1162
HapII CCGG 4 cut(s) 581, 1138, 1177, 1202
HgaI GACGC 1 cut(s) 268
Hin1II CATG 4 cut(s) 457, 695, 966, 1221
HincII GTYRAC 2 cut(s) 364, 810
HindII GTYRAC 2 cut(s) 364, 810
HindIII AAGCTT 2 cut(s) 401, 641
HinfI GANTC 4 cut(s) 131, 330, 475, 623
HpaII CCGG 4 cut(s) 581, 1138, 1177, 1202
HphI GGTGA 8 cut(s) 187, 332, 422, 470, 692, 1070, 1173, 1191
Hpy166II GTNNAC 6 cut(s) 250, 364, 778, 810, 1053, 1208
Hpy188I TCNGA 7 cut(s) 94, 99, 125, 227, 628, 649, 957
Hpy188III TCNNGA 6 cut(s) 67, 81, 470, 516, 601, 800
Hpy8I GTNNAC 6 cut(s) 250, 364, 778, 810, 1053, 1208
Hpy99I CGWCG 1 cut(s) 284
HpyAV CCTTC 3 cut(s) 224, 513, 952
HpyCH4III ACNGT 2 cut(s) 247, 344
HpyCH4IV ACGT 1 cut(s) 1155
HpyF10VI GCNNNNNNNGC 4 cut(s) 539, 959, 1097, 1103
HpyF3I CTNAG 5 cut(s) 91, 98, 658, 954, 986
HpySE526I ACGT 1 cut(s) 1155
Hsp92II CATG 4 cut(s) 457, 695, 966, 1221
KpnI GGTACC 1 cut(s) 246
Kzo9I GATC 5 cut(s) 83, 94, 103, 427, 1068
LmnI GCTCC 4 cut(s) 69, 505, 539, 1094
LweI GCATC 1 cut(s) 1051
MaeI CTAG 5 cut(s) 18, 516, 800, 843, 1005
MaeII ACGT 1 cut(s) 1155
MaeIII GTNAC 4 cut(s) 257, 338, 410, 1179
MalI GATC 5 cut(s) 85, 96, 105, 429, 1070
MboI GATC 5 cut(s) 83, 94, 103, 427, 1068
MboII GAAGA 4 cut(s) 28, 82, 788, 828
MflI RGATCY 1 cut(s) 94
MhlI GDGCHC 1 cut(s) 874
MluCI AATT 3 cut(s) 912, 1170, 1192
MlyI GAGTC 3 cut(s) 125, 324, 617
MmeI TCCRAC 1 cut(s) 651
MseI TTAA 1 cut(s) 318
MspA1I CMGCKG 1 cut(s) 1091
MspI CCGG 4 cut(s) 581, 1138, 1177, 1202
MspR9I CCNGG 4 cut(s) 335, 677, 1164, 1203
Mva1269I GAATGC 1 cut(s) 1137
MvaI CCWGG 3 cut(s) 335, 677, 1164
MvnI CGCG 1 cut(s) 279
MwoI GCNNNNNNNGC 4 cut(s) 539, 959, 1097, 1103
NciI CCSGG 1 cut(s) 1203
NdeII GATC 5 cut(s) 83, 94, 103, 427, 1068
NlaIII CATG 4 cut(s) 457, 695, 966, 1221
NlaIV GGNNCC 4 cut(s) 244, 673, 1041, 1119
NmeAIII GCCGAG 2 cut(s) 351, 853
NmuCI GTSAC 2 cut(s) 338, 1179
NspI RCATGY 2 cut(s) 966, 1221
NspV TTCGAA 1 cut(s) 487
PaeI GCATGC 2 cut(s) 966, 1221
PaeR7I CTCGAG 1 cut(s) 702
PasI CCCWGGG 1 cut(s) 676
PceI AGGCCT 1 cut(s) 552
PcsI WCGNNNNNNNCGW 1 cut(s) 30
PctI GAATGC 1 cut(s) 1137
PfeI GAWTC 1 cut(s) 475
PinAI ACCGGT 1 cut(s) 580
PleI GAGTC 3 cut(s) 125, 324, 617
PpsI GAGTC 3 cut(s) 125, 324, 617
PpuMI RGGWCCY 1 cut(s) 313
Psp1406I AACGTT 1 cut(s) 1155
Psp5II RGGWCCY 1 cut(s) 313
Psp6I CCWGG 3 cut(s) 333, 675, 1162
PspEI GGTNACC 2 cut(s) 338, 1179
PspGI CCWGG 3 cut(s) 333, 675, 1162
PspN4I GGNNCC 4 cut(s) 244, 673, 1041, 1119
PspPI GGNCC 4 cut(s) 313, 671, 1160, 1208
PspPPI RGGWCCY 1 cut(s) 313
PspXI VCTCGAGB 1 cut(s) 702
PstI CTGCAG 2 cut(s) 909, 1216
PsuI RGATCY 1 cut(s) 94
PvuII CAGCTG 1 cut(s) 1091
RsaI GTAC 4 cut(s) 16, 244, 715, 1054
RsaNI GTAC 4 cut(s) 15, 243, 714, 1053
SaqAI TTAA 1 cut(s) 318
Sau3AI GATC 5 cut(s) 83, 94, 103, 427, 1068
Sau96I GGNCC 4 cut(s) 313, 671, 1160, 1208
SchI GAGTC 3 cut(s) 125, 324, 617
ScrFI CCNGG 4 cut(s) 335, 677, 1164, 1203
SduI GDGCHC 1 cut(s) 874
SfaNI GCATC 1 cut(s) 1051
SfcI CTRYAG 3 cut(s) 905, 1086, 1212
Sfr274I CTCGAG 1 cut(s) 702
SfuI TTCGAA 1 cut(s) 487
SinI GGWCC 3 cut(s) 313, 671, 1208
SlaI CTCGAG 1 cut(s) 702
SmlI CTYRAG 6 cut(s) 45, 51, 185, 287, 470, 702
SmoI CTYRAG 6 cut(s) 45, 51, 185, 287, 470, 702
SphI GCATGC 2 cut(s) 966, 1221
Sse9I AATT 3 cut(s) 912, 1170, 1192
SseBI AGGCCT 1 cut(s) 552
SsiI CCGC 5 cut(s) 12, 208, 277, 503, 636
SspMI CTAG 5 cut(s) 18, 516, 800, 843, 1005
StuI AGGCCT 1 cut(s) 552
StyD4I CCNGG 4 cut(s) 333, 675, 1162, 1201
TaaI ACNGT 2 cut(s) 247, 344
TaiI ACGT 1 cut(s) 1158
TaqI TCGA 2 cut(s) 487, 703
TasI AATT 3 cut(s) 912, 1170, 1192
TatI WGTACW 1 cut(s) 1052
TfiI GAWTC 1 cut(s) 475
Tru1I TTAA 1 cut(s) 318
Tru9I TTAA 1 cut(s) 318
TscAI CASTG 2 cut(s) 831, 1055
TseFI GTSAC 2 cut(s) 338, 1179
Tsp45I GTSAC 2 cut(s) 338, 1179
TspDTI ATGAA 2 cut(s) 442, 699
TspGWI ACGGA 2 cut(s) 76, 371
TspRI CASTG 2 cut(s) 831, 1055
VpaK11BI GGWCC 3 cut(s) 313, 671, 1208
XagI CCTNNNNNAGG 1 cut(s) 320
XbaI TCTAGA 2 cut(s) 515, 799
XceI RCATGY 2 cut(s) 966, 1221
XhoI CTCGAG 1 cut(s) 702
XmiI GTMKAC 2 cut(s) 249, 777
XspI CTAG 5 cut(s) 18, 516, 800, 843, 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.