Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0010958

Physical Location & Seq

Genomic Coordinates Reverse (-)

7658524 .. 7661980

Gene Structure 3457 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG097800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGGGGAACTGCGGAACTAGGGAGGAAGCTGCTGTGGTGAATGCTCAAGTAGTTCAGCAGCTGAGCTCGTTGCCGTCGTCGTCGGTGAAGAGCGACAAGATTAAGCAGCAGAATCACAGCCGTTCGATTTCAGATCTGAGCGATCCTTCGACTCCACGCAACTTCGAGGACGCGCGCAAGAATGCCGTGCTCTACACGCACGTCATCGCCTTCACGCTCTTCGAGCTCGAGACCATCACCAAGAGCTTCCGGTCCGACTACATCTTGGGCGAGGGAGGCTTCGGCACCGTGTACAAGGGCTACATTGACGAGAATGTCCGGGTGGGGCTTAAATCTCTGCCGGTGGCCGTGAAAGTGCTCAACAAAGAGGGCCTTCAGGGCCACCGGGAGTGGCTGACCGAGGTCAACTTCCTCGGCCAGCTCCGCCACCCCAATCTCGTCAAATTGATCGGGTATTGCTGTGAGGACGATCACAGATTGCTTGTGTATGAGTTCATGTTCCGAGGGAGCCTTGAAAATCACTTGTTCCGCAAGGCGACTGTTCCGTTGTCGTGGTCCAGAAGAATGCTGATTGCTCTCGGAGCTGCCAAGGGACTTGCTTTTCTTCACAATGCGGAAAGGCCAGTCATCTATAGAGACTTCAAAACTTCTAATATCTTGTTGGACTCTGATTATACCGCAAAGCTATCTGATTTCGGGCTAGCTAAAGCTGGACCCCAAGGGGATGAGACCCATGTGTCAACTAGAGTGATGGGTACCTATGGCTATGCAGCCCCTGAGTATGTAATGACTGGCCACCTGACGGCCAGGAGTGATGTATACAGCTTTGGAGTCGTTCTTCTTGAGCTTCTGACAGGAAGGAAATCGGTTGACAAGACAAGACCAAGCAAGGAGCAGAACTTGGTAGATTGGGCACGACCAAAACTGAATGACAAGAGAAAGTTGCTACAAATAATCGACCCTAGGTTGGATCAGTACTCAACCAGGGCAGCACAGAAAGCTTGCAGCCTGGCATACTATTGCCTCAGCCAAAACCCCAAAGCGAGGCCCTTAATGAGTGATGTAGTAGAGACTTTGGAACCGCTACAAACTTGTAACGATCCAAATGAATCATCCTTGGGCGGACCATTTGCCATGAGCAGACTTCCTGATTATCGAATGCGTCAAAGGTTTTCTAACAACGTAGGTCCAGGTGCTATTTGTCGATCTCCAAACCCAAATATTTCTCCTGGAGGTCCTGCAGCATGCAGAGTTAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

419

Amino Acids

46.74

Weight (kDa)

9.18

Isoelectric Point (pI)

38.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	86 - 357	1.2e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	88 - 359	2.2e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010958)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01020
fragaria_vesca	FvH4_6g09140 FvH4_6g09140 FvH4_6g09140
malus_domestica	MD04G1180400.v1.1 MD12G1195800.v1.1
prunus_persica	Prupe.6G300300_v2.0.a1
pyrus_communis	pycom04g15950 pycom12g18200
rosa_chinensis	RchiOBHm_Chr3g0459351
rosa_laevigata	RLG00000025088
rosa_multiflora	Rmu_sc0006944.1_g000003
rosa_roxburghii	Rroxscaffold_6G00420240
rosa_rugosa	Rorug03G0035600 Rorug03G0035700
rosa_samantha	Rh3AG093700 Rh3BG096600 Rh3CG097800 Rh3DG097200
rosa_wichuraiana	Rw3G008060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	314, 736
Acc65I	GGTACC	1 cut(s)	755
AccB1I	GGYRCC	2 cut(s)	284, 755
AccI	GTMKAC	1 cut(s)	819
AccII	CGCG	2 cut(s)	173, 175
AciI	CCGC	7 cut(s)	12, 424, 529, 614, 678, 1082, 1122
AclWI	GGATC	3 cut(s)	137, 978, 1094
AcoI	YGGCCR	4 cut(s)	345, 415, 793, 804
AcuI	CTGAAG	1 cut(s)	359
AfaI	GTAC	3 cut(s)	293, 757, 977
AfiI	CCNNNNNNNGG	3 cut(s)	802, 967, 1044
AgsI	TTSAA	2 cut(s)	515, 643
AjiI	CACGTC	1 cut(s)	202
AjnI	CCWGG	5 cut(s)	806, 983, 1008, 1189, 1228
Alw21I	GWGCWC	4 cut(s)	68, 192, 228, 360
Alw26I	GTCTC	4 cut(s)	224, 630, 722, 1064
AlwI	GGATC	3 cut(s)	137, 978, 1094
AlwNI	CAGNNNCTG	2 cut(s)	61, 776
Ama87I	CYCGRG	1 cut(s)	227
AoxI	GGCC	8 cut(s)	345, 370, 379, 415, 620, 793, 804, 1046
ApeKI	GCWGC	8 cut(s)	29, 58, 106, 584, 770, 989, 1005, 1241
Asp718I	GGTACC	1 cut(s)	755
AspA2I	CCTAGG	1 cut(s)	962
AspLEI	GCGC	2 cut(s)	175, 177
AspS9I	GGNCC	9 cut(s)	252, 370, 379, 555, 713, 1047, 1124, 1187, 1235
AsuC2I	CCSGG	2 cut(s)	320, 386
AsuHPI	GGTGA	3 cut(s)	49, 97, 229
AsuNHI	GCTAGC	1 cut(s)	700
AvaI	CYCGRG	1 cut(s)	227
AvaII	GGWCC	6 cut(s)	252, 555, 713, 1124, 1187, 1235
AvrII	CCTAGG	1 cut(s)	962
BaeGI	GKGCMC	1 cut(s)	916
BalI	TGGCCA	1 cut(s)	795
BanI	GGYRCC	2 cut(s)	284, 755
BanII	GRGCYC	2 cut(s)	68, 228
Bbv12I	GWGCWC	4 cut(s)	68, 192, 228, 360
BbvCI	CCTCAGC	1 cut(s)	1025
BbvI	GCAGC	8 cut(s)	16, 70, 118, 571, 782, 1001, 1017, 1253
BccI	CCATC	2 cut(s)	242, 745
BceAI	ACGGC	5 cut(s)	58, 105, 170, 332, 819
BciT130I	CCWGG	5 cut(s)	808, 985, 1010, 1191, 1230
BcnI	CCSGG	2 cut(s)	320, 386
BcoDI	GTCTC	4 cut(s)	224, 630, 722, 1064
BfaI	CTAG	4 cut(s)	18, 701, 744, 963
BfmI	CTRYAG	2 cut(s)	631, 1239
BglI	GCCNNNNNGGC	1 cut(s)	378
BglII	AGATCT	1 cut(s)	133
BisI	GCNGC	8 cut(s)	30, 59, 107, 585, 771, 990, 1006, 1242
BlnI	CCTAGG	1 cut(s)	962
BlpI	GCTNAGC	1 cut(s)	62
BlsI	GCNGC	8 cut(s)	31, 60, 108, 586, 772, 991, 1007, 1243
BmcAI	AGTACT	1 cut(s)	977
Bme1390I	CCNGG	7 cut(s)	320, 386, 808, 985, 1010, 1191, 1230
Bme18I	GGWCC	6 cut(s)	252, 555, 713, 1124, 1187, 1235
BmeT110I	CYCGRG	1 cut(s)	227
BmgBI	CACGTC	1 cut(s)	202
BmgT120I	GGNCC	9 cut(s)	252, 370, 379, 555, 713, 1047, 1124, 1187, 1235
BmiI	GGNNCC	5 cut(s)	286, 509, 715, 757, 1080
BmrFI	CCNGG	7 cut(s)	320, 386, 808, 985, 1010, 1191, 1230
BmtI	GCTAGC	1 cut(s)	704
BoxI	GACNNNNGTC	1 cut(s)	401
BpmI	CTGGAG	1 cut(s)	1251
Bpu10I	CCTNAGC	1 cut(s)	1025
Bpu1102I	GCTNAGC	1 cut(s)	62
BpuEI	CTTGAG	2 cut(s)	30, 863
BpuMI	CCSGG	2 cut(s)	320, 386
BsaI	GGTCTC	2 cut(s)	224, 722
BsaJI	CCNNGG	8 cut(s)	399, 412, 502, 588, 718, 962, 984, 1116
BsaWI	WCCGGW	1 cut(s)	249
Bsc4I	CCNNNNNNNGG	3 cut(s)	802, 967, 1044
Bse118I	RCCGGY	1 cut(s)	340
Bse1I	ACTGG	2 cut(s)	623, 796
BseBI	CCWGG	5 cut(s)	808, 985, 1010, 1191, 1230
BseDI	CCNNGG	8 cut(s)	399, 412, 502, 588, 718, 962, 984, 1116
BseGI	GGATG	2 cut(s)	730, 1112
BseLI	CCNNNNNNNGG	3 cut(s)	802, 967, 1044
BseMII	CTCAG	4 cut(s)	53, 128, 768, 1039
BseNI	ACTGG	2 cut(s)	623, 796
BsePI	GCGCGC	1 cut(s)	173
BseSI	GKGCMC	1 cut(s)	916
BseXI	GCAGC	8 cut(s)	16, 70, 118, 571, 782, 1001, 1017, 1253
Bsh1236I	CGCG	2 cut(s)	173, 175
BshFI	GGCC	8 cut(s)	347, 372, 381, 417, 622, 795, 806, 1048
BshNI	GGYRCC	2 cut(s)	284, 755
BsiHKAI	GWGCWC	4 cut(s)	68, 192, 228, 360
BsiHKCI	CYCGRG	1 cut(s)	227
BsiSI	CCGG	4 cut(s)	250, 319, 341, 385
BslFI	GGGAC	1 cut(s)	606
BslI	CCNNNNNNNGG	3 cut(s)	802, 967, 1044
BsmAI	GTCTC	4 cut(s)	224, 630, 722, 1064
BsmFI	GGGAC	1 cut(s)	606
BsmI	GAATGC	4 cut(s)	46, 187, 570, 1164
BsnI	GGCC	8 cut(s)	347, 372, 381, 417, 622, 795, 806, 1048
Bso31I	GGTCTC	2 cut(s)	224, 722
BsoBI	CYCGRG	1 cut(s)	227
Bsp1286I	GDGCHC	5 cut(s)	68, 192, 228, 360, 916
Bsp1407I	TGTACA	1 cut(s)	291
Bsp143I	GATC	7 cut(s)	133, 142, 447, 469, 970, 1099, 1205
Bsp1720I	GCTNAGC	1 cut(s)	62
BspACI	CCGC	7 cut(s)	12, 424, 529, 614, 678, 1082, 1122
BspANI	GGCC	8 cut(s)	347, 372, 381, 417, 622, 795, 806, 1048
BspCNI	CTCAG	4 cut(s)	54, 129, 769, 1038
BspFNI	CGCG	2 cut(s)	173, 175
BspLI	GGNNCC	5 cut(s)	286, 509, 715, 757, 1080
BspMAI	CTGCAG	1 cut(s)	1243
BspOI	GCTAGC	1 cut(s)	704
BspPI	GGATC	3 cut(s)	137, 978, 1094
BspQI	GCTCTTC	2 cut(s)	83, 224
BspT107I	GGYRCC	2 cut(s)	284, 755
BspTNI	GGTCTC	2 cut(s)	224, 722
BsrFI	RCCGGY	1 cut(s)	340
BsrGI	TGTACA	1 cut(s)	291
BsrI	ACTGG	2 cut(s)	623, 796
BssAI	RCCGGY	1 cut(s)	340
BssECI	CCNNGG	8 cut(s)	399, 412, 502, 588, 718, 962, 984, 1116
BssHII	GCGCGC	1 cut(s)	173
BssMI	GATC	7 cut(s)	133, 142, 447, 469, 970, 1099, 1205
BssNAI	GTATAC	1 cut(s)	820
BssT1I	CCWWGG	4 cut(s)	588, 718, 962, 1116
Bst1107I	GTATAC	1 cut(s)	820
Bst2UI	CCWGG	5 cut(s)	808, 985, 1010, 1191, 1230
Bst4CI	ACNGT	2 cut(s)	289, 541
Bst6I	CTCTTC	2 cut(s)	83, 224
BstAUI	TGTACA	1 cut(s)	291
BstC8I	GCNNGC	5 cut(s)	175, 419, 702, 1003, 1246
BstDEI	CTNAG	4 cut(s)	62, 137, 777, 1025
BstF5I	GGATG	2 cut(s)	730, 1112
BstFNI	CGCG	2 cut(s)	173, 175
BstHHI	GCGC	2 cut(s)	175, 177
BstKTI	GATC	7 cut(s)	136, 145, 450, 472, 973, 1102, 1208
BstMAI	GTCTC	4 cut(s)	224, 630, 722, 1064
BstMBI	GATC	7 cut(s)	133, 142, 447, 469, 970, 1099, 1205
BstMWI	GCNNNNNNNGC	7 cut(s)	196, 223, 276, 378, 423, 581, 998
BstNI	CCWGG	5 cut(s)	808, 985, 1010, 1191, 1230
BstNSI	RCATGY	1 cut(s)	1248
BstPAI	GACNNNNGTC	1 cut(s)	401
BstSCI	CCNGG	7 cut(s)	318, 384, 806, 983, 1008, 1189, 1228
BstSFI	CTRYAG	2 cut(s)	631, 1239
BstSLI	GKGCMC	1 cut(s)	916
BstUI	CGCG	2 cut(s)	173, 175
BstV1I	GCAGC	8 cut(s)	16, 70, 118, 571, 782, 1001, 1017, 1253
BstX2I	RGATCY	1 cut(s)	133
BstYI	RGATCY	1 cut(s)	133
BstZ17I	GTATAC	1 cut(s)	820
BsuRI	GGCC	8 cut(s)	347, 372, 381, 417, 622, 795, 806, 1048
BtgZI	GCGATG	1 cut(s)	190
BtrI	CACGTC	1 cut(s)	202
BtsCI	GGATG	2 cut(s)	730, 1112
Cac8I	GCNNGC	5 cut(s)	175, 419, 702, 1003, 1246
CaiI	CAGNNNCTG	2 cut(s)	61, 776
CfoI	GCGC	2 cut(s)	175, 177
Cfr10I	RCCGGY	1 cut(s)	340
Cfr13I	GGNCC	9 cut(s)	252, 370, 379, 555, 713, 1047, 1124, 1187, 1235
CpoI	CGGWCCG	1 cut(s)	252
CseI	GACGC	2 cut(s)	179, 1151
Csp6I	GTAC	3 cut(s)	292, 756, 976
CspI	CGGWCCG	1 cut(s)	252
CviAII	CATG	4 cut(s)	496, 734, 1135, 1245
CviQI	GTAC	3 cut(s)	292, 756, 976
DdeI	CTNAG	4 cut(s)	62, 137, 777, 1025
DpnI	GATC	7 cut(s)	135, 144, 449, 471, 972, 1101, 1207
DpnII	GATC	7 cut(s)	133, 142, 447, 469, 970, 1099, 1205
DrdI	GACNNNNNNGTC	2 cut(s)	314, 736
DseDI	GACNNNNNNGTC	2 cut(s)	314, 736
EaeI	YGGCCR	4 cut(s)	345, 415, 793, 804
Eam1104I	CTCTTC	2 cut(s)	83, 224
EarI	CTCTTC	2 cut(s)	83, 224
EciI	GGCGGA	2 cut(s)	413, 1137
Ecl136II	GAGCTC	2 cut(s)	66, 226
Eco130I	CCWWGG	4 cut(s)	588, 718, 962, 1116
Eco24I	GRGCYC	2 cut(s)	68, 228
Eco31I	GGTCTC	2 cut(s)	224, 722
Eco47I	GGWCC	6 cut(s)	252, 555, 713, 1124, 1187, 1235
Eco53kI	GAGCTC	2 cut(s)	66, 226
Eco57I	CTGAAG	1 cut(s)	359
Eco88I	CYCGRG	1 cut(s)	227
EcoICRI	GAGCTC	2 cut(s)	66, 226
EcoO109I	RGGNCCY	3 cut(s)	370, 1047, 1235
EcoRII	CCWGG	5 cut(s)	806, 983, 1008, 1189, 1228
EcoT14I	CCWWGG	4 cut(s)	588, 718, 962, 1116
EcoT38I	GRGCYC	2 cut(s)	68, 228
ErhI	CCWWGG	4 cut(s)	588, 718, 962, 1116
FaeI	CATG	4 cut(s)	499, 737, 1138, 1248
FalI	AAGNNNNNCTT	2 cut(s)	357, 389
FaqI	GGGAC	1 cut(s)	606
FatI	CATG	4 cut(s)	495, 733, 1134, 1244
FblI	GTMKAC	1 cut(s)	819
Fnu4HI	GCNGC	8 cut(s)	30, 59, 107, 585, 771, 990, 1006, 1242
FokI	GGATG	2 cut(s)	737, 1099
FriOI	GRGCYC	2 cut(s)	68, 228
Fsp4HI	GCNGC	8 cut(s)	30, 59, 107, 585, 771, 990, 1006, 1242
FspBI	CTAG	4 cut(s)	18, 701, 744, 963
GlaI	GCGC	2 cut(s)	174, 176
GluI	GCNGC	8 cut(s)	30, 59, 107, 585, 771, 990, 1006, 1242
GsuI	CTGGAG	1 cut(s)	1251
HaeIII	GGCC	8 cut(s)	347, 372, 381, 417, 622, 795, 806, 1048
HapII	CCGG	4 cut(s)	250, 319, 341, 385
HgaI	GACGC	2 cut(s)	179, 1151
HhaI	GCGC	2 cut(s)	175, 177
Hin1II	CATG	4 cut(s)	499, 737, 1138, 1248
Hin6I	GCGC	2 cut(s)	173, 175
HinP1I	GCGC	2 cut(s)	173, 175
HincII	GTYRAC	3 cut(s)	406, 741, 871
HindII	GTYRAC	3 cut(s)	406, 741, 871
HindIII	AAGCTT	1 cut(s)	999
HinfI	GANTC	5 cut(s)	112, 151, 665, 831, 1109
HpaII	CCGG	4 cut(s)	250, 319, 341, 385
HphI	GGTGA	3 cut(s)	49, 97, 229
Hpy166II	GTNNAC	5 cut(s)	292, 406, 741, 820, 871
Hpy188I	TCNGA	8 cut(s)	133, 138, 256, 503, 581, 670, 691, 852
Hpy188III	TCNNGA	4 cut(s)	229, 558, 842, 1148
Hpy8I	GTNNAC	5 cut(s)	292, 406, 741, 820, 871
Hpy99I	CGWCG	3 cut(s)	79, 82, 85
HpyAV	CCTTC	4 cut(s)	156, 220, 383, 852
HpyCH4III	ACNGT	2 cut(s)	289, 541
HpyCH4IV	ACGT	2 cut(s)	201, 1182
HpyCH4V	TGCA	4 cut(s)	770, 1005, 1241, 1248
HpyF10VI	GCNNNNNNNGC	7 cut(s)	196, 223, 276, 378, 423, 581, 998
HpyF3I	CTNAG	4 cut(s)	62, 137, 777, 1025
HpySE526I	ACGT	2 cut(s)	201, 1182
Hsp92II	CATG	4 cut(s)	499, 737, 1138, 1248
HspAI	GCGC	2 cut(s)	173, 175
KpnI	GGTACC	1 cut(s)	759
Kzo9I	GATC	7 cut(s)	133, 142, 447, 469, 970, 1099, 1205
LguI	GCTCTTC	2 cut(s)	83, 224
LmnI	GCTCC	4 cut(s)	426, 507, 581, 892
Lsp1109I	GCAGC	8 cut(s)	16, 70, 118, 571, 782, 1001, 1017, 1253
MaeI	CTAG	4 cut(s)	18, 701, 744, 963
MaeII	ACGT	2 cut(s)	201, 1182
MaeIII	GTNAC	1 cut(s)	1094
MalI	GATC	7 cut(s)	135, 144, 449, 471, 972, 1101, 1207
MboI	GATC	7 cut(s)	133, 142, 447, 469, 970, 1099, 1205
MboII	GAAGA	5 cut(s)	100, 211, 573, 596, 830
MflI	RGATCY	1 cut(s)	133
MhlI	GDGCHC	5 cut(s)	68, 192, 228, 360, 916
MlsI	TGGCCA	1 cut(s)	795
MluCI	AATT	1 cut(s)	443
MluNI	TGGCCA	1 cut(s)	795
MlyI	GAGTC	3 cut(s)	145, 659, 840
MmeI	TCCRAC	3 cut(s)	279, 642, 948
Mox20I	TGGCCA	1 cut(s)	795
MscI	TGGCCA	1 cut(s)	795
MseI	TTAA	3 cut(s)	102, 330, 1052
Msp20I	TGGCCA	1 cut(s)	795
MspA1I	CMGCKG	1 cut(s)	61
MspI	CCGG	4 cut(s)	250, 319, 341, 385
MspR9I	CCNGG	7 cut(s)	320, 386, 808, 985, 1010, 1191, 1230
Mva1269I	GAATGC	4 cut(s)	46, 187, 570, 1164
MvaI	CCWGG	5 cut(s)	808, 985, 1010, 1191, 1230
MvnI	CGCG	2 cut(s)	173, 175
MwoI	GCNNNNNNNGC	7 cut(s)	196, 223, 276, 378, 423, 581, 998
NciI	CCSGG	2 cut(s)	320, 386
NdeII	GATC	7 cut(s)	133, 142, 447, 469, 970, 1099, 1205
NheI	GCTAGC	1 cut(s)	700
NlaIII	CATG	4 cut(s)	499, 737, 1138, 1248
NlaIV	GGNNCC	5 cut(s)	286, 509, 715, 757, 1080
NmeAIII	GCCGAG	1 cut(s)	393
NspI	RCATGY	1 cut(s)	1248
PaeI	GCATGC	1 cut(s)	1248
PaeR7I	CTCGAG	1 cut(s)	227
PauI	GCGCGC	1 cut(s)	173
PciSI	GCTCTTC	2 cut(s)	83, 224
PcsI	WCGNNNNNNNCGW	1 cut(s)	74
PctI	GAATGC	4 cut(s)	46, 187, 570, 1164
PfeI	GAWTC	2 cut(s)	112, 1109
PfoI	TCCNGGA	1 cut(s)	1228
PkrI	GCNGC	8 cut(s)	31, 60, 108, 586, 772, 991, 1007, 1243
PleI	GAGTC	3 cut(s)	145, 659, 839
PpsI	GAGTC	3 cut(s)	145, 659, 839
PpuMI	RGGWCCY	1 cut(s)	1235
PshAI	GACNNNNGTC	1 cut(s)	401
Psp124BI	GAGCTC	2 cut(s)	68, 228
Psp5II	RGGWCCY	1 cut(s)	1235
Psp6I	CCWGG	5 cut(s)	806, 983, 1008, 1189, 1228
PspGI	CCWGG	5 cut(s)	806, 983, 1008, 1189, 1228
PspN4I	GGNNCC	5 cut(s)	286, 509, 715, 757, 1080
PspPI	GGNCC	9 cut(s)	252, 370, 379, 555, 713, 1047, 1124, 1187, 1235
PspPPI	RGGWCCY	1 cut(s)	1235
PstI	CTGCAG	1 cut(s)	1243
PstNI	CAGNNNCTG	2 cut(s)	61, 776
PsuI	RGATCY	1 cut(s)	133
PteI	GCGCGC	1 cut(s)	173
PvuII	CAGCTG	1 cut(s)	61
RsaI	GTAC	3 cut(s)	293, 757, 977
RsaNI	GTAC	3 cut(s)	292, 756, 976
Rsr2I	CGGWCCG	1 cut(s)	252
RsrII	CGGWCCG	1 cut(s)	252
SacI	GAGCTC	2 cut(s)	68, 228
SapI	GCTCTTC	2 cut(s)	83, 224
SaqAI	TTAA	3 cut(s)	102, 330, 1052
SatI	GCNGC	8 cut(s)	30, 59, 107, 585, 771, 990, 1006, 1242
Sau3AI	GATC	7 cut(s)	133, 142, 447, 469, 970, 1099, 1205
Sau96I	GGNCC	9 cut(s)	252, 370, 379, 555, 713, 1047, 1124, 1187, 1235
ScaI	AGTACT	1 cut(s)	977
SchI	GAGTC	3 cut(s)	145, 659, 840
ScrFI	CCNGG	7 cut(s)	320, 386, 808, 985, 1010, 1191, 1230
SduI	GDGCHC	5 cut(s)	68, 192, 228, 360, 916
SfcI	CTRYAG	2 cut(s)	631, 1239
SfiI	GGCCNNNNNGGCC	1 cut(s)	378
Sfr274I	CTCGAG	1 cut(s)	227
SinI	GGWCC	6 cut(s)	252, 555, 713, 1124, 1187, 1235
SlaI	CTCGAG	1 cut(s)	227
SmlI	CTYRAG	3 cut(s)	45, 227, 842
SmoI	CTYRAG	3 cut(s)	45, 227, 842
SphI	GCATGC	1 cut(s)	1248
Sse9I	AATT	1 cut(s)	443
SsiI	CCGC	7 cut(s)	12, 424, 529, 614, 678, 1082, 1122
SspI	AATATT	1 cut(s)	1222
SspMI	CTAG	4 cut(s)	18, 701, 744, 963
SstI	GAGCTC	2 cut(s)	68, 228
StyD4I	CCNGG	7 cut(s)	318, 384, 806, 983, 1008, 1189, 1228
StyI	CCWWGG	4 cut(s)	588, 718, 962, 1116
TaaI	ACNGT	2 cut(s)	289, 541
TaiI	ACGT	2 cut(s)	204, 1185
TaqI	TCGA	8 cut(s)	125, 149, 165, 222, 228, 957, 1156, 1204
TaqII	GACCGA	1 cut(s)	413
TasI	AATT	1 cut(s)	443
TatI	WGTACW	2 cut(s)	291, 975
TfiI	GAWTC	2 cut(s)	112, 1109
Tru1I	TTAA	3 cut(s)	102, 330, 1052
Tru9I	TTAA	3 cut(s)	102, 330, 1052
TseI	GCWGC	8 cut(s)	29, 58, 106, 584, 770, 989, 1005, 1241
TspDTI	ATGAA	2 cut(s)	484, 1122
TspGWI	ACGGA	1 cut(s)	534
VpaK11BI	GGWCC	6 cut(s)	252, 555, 713, 1124, 1187, 1235
XceI	RCATGY	1 cut(s)	1248
XhoI	CTCGAG	1 cut(s)	227
XmaJI	CCTAGG	1 cut(s)	962
XmiI	GTMKAC	1 cut(s)	819
XspI	CTAG	4 cut(s)	18, 701, 744, 963
ZrmI	AGTACT	1 cut(s)	977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.