Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010236

Physical Location & Seq

Genomic Coordinates Forward (+)

947146 .. 950239

Gene Structure 3094 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G03670.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGCGTCTCAGAGACATTTAAAAGATCTTCTTGAAGAAGATCAAGAACCGTTTCAGCTTCAAAGTTACATCTCAGACCGACGTTGCCAAATCAATGCTCACGTAACGCATTTACAGGTCAAGAAACGCAGACCCATCTCTCAAAACGCTGGACTTCCCTCGCGTTTCTGCCGCAACGCTTGTTTCTTCTCTCTCCGTGAATCTCCTGACCCGAAAAAGTCTCCACTCTTCGAACTCAAGTCACCAAATCGGAGCCAAAACGCGATTTTCGTCAATATACCGGCGAGAACTGCTTCCATTCTACTAGAAGCTGCGGTTAGGATACAGAAACAGAGTTCAGAAGTGTCTAAAACAAGAACACGAAACGCAGGAAACGCGTTTGGTATATTTGGGTCAGTTCTAAAGAAGCTAACGAACCGGAAGAAACGCGAAATCAGCGGCGGCAAAGAAGCTGGTCGCGTTTCTTCCTCTTCTGTTAAAGATATGTTGAGATGGGAATCTCCGGTTGTACGTAAAATAGTCACAAGAAAATCCAAACGTAACGAAGAAGAAAACGCTTCTTCCCAAACGCATAAAATCGCGTCTGAAACGCATTTCTCACGGAGGTCAAGTAGTAGTGGTGTTTGGTCAGAGAGTGTTACGAACGGAGAGAGATCTTGGGACGTTGATTTCGAAACGTCGATTAGCACCAGCAGCCGATCTAACGGTTCAGATGAGTTTGCGATGATGATGAACGGTCAAGATTTATCGGAAGATAAACGTTTTTGTGAAAGCCCGTTTCATTTTGTTCTCCAAACAATGCCATCAAACGGCGGTTTCAGAACGCCGAATTTCTCATCGCCTGCGGCTTCTCCACGCCACGATTGTCATGAGATGGAAAAAGAGAGTTATGAAGTAGAGAAGCTAAAGAAACTAGAAATGGAGGAAGAGGAAGAAGAAAAAGAACAGAGCAGCCCAGTATCAGTTTTGGACCCTCCATTTCAGGACGATGACGAAGACATTCACATGGATGACAATAACATCCCTTCCAGCTTCAGATCTGTACAAAAAGCAAAGCATCTGCTACTACAGAAGCTTTGTAGATTCGAGCAACTTGCGGGTTTAGATCCCATGGAACTCGAGAAACGAATGTCGGATCAAGAGACCGAGGAGGAGGAGGAGGAGGAAGAAGAAGAGATGAAAAGTCTTTATCATTGTGAGATTATAACTCAGAGAGTTCTTAAAACATACTTTGAAGAGATGGTAGAAGTTCCGGAAGGCGTAGAAGCATTGATCTCAGACCTTGCAGCAGAGGAATTGCCAAGCGACATCGACGGTGAAGCTGAAGCCGCGATTGTAGCCAAAAGGGTATGCGAGAGATTGAGATCTTGGAGAGATGTGGAGTCAAACACAATCGATATGATGGTCGAACATGATTTCAGAACAGAGAGATTGGGATTATGGAGATCAAAGAACGACGCAGATGTCTCAGAGACGGTTTTGGATATCGAGTTTGAGATTTTTGAGGATTTGGTTGAAGAATTATCAGAAGACATTGGCGGAAACCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378

Protein Analysis

516

Amino Acids

59.09

Weight (kDa)

5.01

Isoelectric Point (pI)

75.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010236)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03670 AT5G03670
fragaria_vesca	FvH4_6g18100
malus_domestica	MD12G1019500.v1.1 MD14G1017300.v1.1
prunus_persica	Prupe.7G115800_v2.0.a1
pyrus_communis	pycom12g01650 pycom14g01520
rosa_chinensis	RchiOBHm_Chr3g0472371
rosa_laevigata	RLG00000024084
rosa_multiflora	Rmu_sc0000627.1_g000009 Rmu_sc0000798.1_g000016
rosa_roxburghii	Rroxscaffold_4G00299320 Rroxscaffold_6G00408980
rosa_rugosa	Rorug03G0124400
rosa_samantha	Rh3AG176800 Rh3BG202700 Rh3CG193000 Rh3CG200200 Rh3DG172400
rosa_wichuraiana	Rw3G016470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1205
AasI	GACNNNNNNGTC	1 cut(s)	1463
AccII	CGCG	7 cut(s)	163, 263, 377, 429, 459, 581, 1331
AccIII	TCCGGA	1 cut(s)	1252
AciI	CCGC	9 cut(s)	172, 314, 438, 441, 813, 845, 1097, 1329, 1539
AclI	AACGTT	1 cut(s)	760
AclWI	GGATC	2 cut(s)	1100, 1143
AcsI	RAATTY	1 cut(s)	829
AcuI	CTGAAG	2 cut(s)	1018, 1344
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	2 cut(s)	510, 1044
AfiI	CCNNNNNNNGG	1 cut(s)	809
AflIII	ACRYGT	1 cut(s)	375
AgeI	ACCGGT	1 cut(s)	1545
AgsI	TTSAA	4 cut(s)	35, 62, 1235, 1517
AluBI	AGCT	8 cut(s)	58, 311, 409, 452, 904, 1032, 1075, 1322
AluI	AGCT	8 cut(s)	58, 311, 409, 452, 904, 1032, 1075, 1322
Alw26I	GTCTC	6 cut(s)	7, 12, 225, 1136, 1466, 1471
AlwI	GGATC	2 cut(s)	1100, 1143
Ama87I	CYCGRG	1 cut(s)	1118
Aor13HI	TCCGGA	1 cut(s)	1252
ApeKI	GCWGC	4 cut(s)	311, 693, 951, 1286
ApoI	RAATTY	1 cut(s)	829
ArsI	GACNNNNNNTTYG	2 cut(s)	653, 685
AsiGI	ACCGGT	1 cut(s)	1545
Asp700I	GAANNNNTTC	3 cut(s)	51, 292, 999
AspS9I	GGNCC	1 cut(s)	970
AsuHPI	GGTGA	2 cut(s)	234, 1328
AsuII	TTCGAA	2 cut(s)	231, 672
AvaI	CYCGRG	1 cut(s)	1118
AvaII	GGWCC	1 cut(s)	970
BbsI	GAAGAC	2 cut(s)	1002, 1536
BbvI	GCAGC	4 cut(s)	298, 705, 963, 1298
BccI	CCATC	6 cut(s)	143, 486, 811, 868, 1234, 1396
BceAI	ACGGC	1 cut(s)	826
BcgI	CGANNNNNNTGC	2 cut(s)	1076, 1110
BciVI	GTATCC	1 cut(s)	315
BcoDI	GTCTC	6 cut(s)	7, 12, 225, 1136, 1466, 1471
BfaI	CTAG	2 cut(s)	305, 914
BfmI	CTRYAG	1 cut(s)	1067
BfuI	GTATCC	1 cut(s)	315
BglII	AGATCT	4 cut(s)	25, 653, 1037, 1364
BisI	GCNGC	9 cut(s)	172, 312, 439, 442, 694, 846, 952, 1287, 1329
BlsI	GCNGC	9 cut(s)	173, 313, 440, 443, 695, 847, 953, 1288, 1330
Bme18I	GGWCC	1 cut(s)	970
BmeT110I	CYCGRG	1 cut(s)	1118
BmgT120I	GGNCC	1 cut(s)	970
BmiI	GGNNCC	2 cut(s)	254, 972
BmrI	ACTGGG	1 cut(s)	950
BmsI	GCATC	1 cut(s)	1066
BmuI	ACTGGG	1 cut(s)	950
BpiI	GAAGAC	2 cut(s)	1002, 1536
Bpu14I	TTCGAA	2 cut(s)	231, 672
BpuEI	CTTGAG	1 cut(s)	221
Bsa29I	ATCGAT	1 cut(s)	1395
BsaAI	YACGTR	2 cut(s)	103, 512
BsaBI	GATNNNNATC	2 cut(s)	496, 1363
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	1136
BsaJI	CCNNGG	2 cut(s)	1110, 1146
BsaWI	WCCGGW	4 cut(s)	417, 502, 1252, 1545
BsaXI	ACNNNNNCTCC	2 cut(s)	595, 625
Bsc4I	CCNNNNNNNGG	1 cut(s)	809
Bse118I	RCCGGY	2 cut(s)	280, 1545
Bse1I	ACTGG	1 cut(s)	956
Bse8I	GATNNNNATC	2 cut(s)	496, 1363
BseAI	TCCGGA	1 cut(s)	1252
BseCI	ATCGAT	1 cut(s)	1395
BseDI	CCNNGG	2 cut(s)	1110, 1146
BseGI	GGATG	2 cut(s)	1015, 1020
BseJI	GATNNNNATC	2 cut(s)	496, 1363
BseLI	CCNNNNNNNGG	1 cut(s)	809
BseMII	CTCAG	5 cut(s)	23, 87, 1223, 1290, 1482
BseNI	ACTGG	1 cut(s)	956
BseRI	GAGGAG	5 cut(s)	1163, 1166, 1169, 1172, 1175
BseXI	GCAGC	4 cut(s)	298, 705, 963, 1298
Bsh1236I	CGCG	7 cut(s)	163, 263, 377, 429, 459, 581, 1331
BshTI	ACCGGT	1 cut(s)	1545
BshVI	ATCGAT	1 cut(s)	1395
BsiHKCI	CYCGRG	1 cut(s)	1118
BsiSI	CCGG	5 cut(s)	281, 418, 503, 1253, 1546
BslFI	GGGAC	1 cut(s)	674
BslI	CCNNNNNNNGG	1 cut(s)	809
BsmAI	GTCTC	6 cut(s)	7, 12, 225, 1136, 1466, 1471
BsmBI	CGTCTC	2 cut(s)	12, 1466
BsmFI	GGGAC	1 cut(s)	674
Bso31I	GGTCTC	1 cut(s)	1136
BsoBI	CYCGRG	1 cut(s)	1118
Bsp119I	TTCGAA	2 cut(s)	231, 672
Bsp13I	TCCGGA	1 cut(s)	1252
Bsp1407I	TGTACA	1 cut(s)	1042
Bsp19I	CCATGG	1 cut(s)	1110
BspACI	CCGC	9 cut(s)	172, 314, 438, 441, 813, 845, 1097, 1329, 1539
BspCNI	CTCAG	5 cut(s)	22, 86, 1222, 1289, 1481
BspDI	ATCGAT	1 cut(s)	1395
BspEI	TCCGGA	1 cut(s)	1252
BspFNI	CGCG	7 cut(s)	163, 263, 377, 429, 459, 581, 1331
BspHI	TCATGA	1 cut(s)	868
BspLI	GGNNCC	2 cut(s)	254, 972
BspPI	GGATC	2 cut(s)	1100, 1143
BspT104I	TTCGAA	2 cut(s)	231, 672
BspTNI	GGTCTC	1 cut(s)	1136
BsrFI	RCCGGY	2 cut(s)	280, 1545
BsrGI	TGTACA	1 cut(s)	1042
BsrI	ACTGG	1 cut(s)	956
BssAI	RCCGGY	2 cut(s)	280, 1545
BssECI	CCNNGG	2 cut(s)	1110, 1146
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	1110
Bst4CI	ACNGT	5 cut(s)	51, 707, 737, 1316, 1477
Bst6I	CTCTTC	5 cut(s)	233, 475, 921, 1167, 1230
BstACI	GRCGYC	1 cut(s)	5
BstAUI	TGTACA	1 cut(s)	1042
BstBAI	YACGTR	2 cut(s)	103, 512
BstBI	TTCGAA	2 cut(s)	231, 672
BstC8I	GCNNGC	1 cut(s)	843
BstDEI	CTNAG	5 cut(s)	9, 73, 1209, 1276, 1468
BstDSI	CCRYGG	1 cut(s)	1110
BstF5I	GGATG	2 cut(s)	1015, 1020
BstFNI	CGCG	7 cut(s)	163, 263, 377, 429, 459, 581, 1331
BstMAI	GTCTC	6 cut(s)	7, 12, 225, 1136, 1466, 1471
BstMWI	GCNNNNNNNGC	6 cut(s)	290, 374, 435, 693, 1328, 1337
BstSFI	CTRYAG	1 cut(s)	1067
BstSNI	TACGTA	1 cut(s)	512
BstUI	CGCG	7 cut(s)	163, 263, 377, 429, 459, 581, 1331
BstV1I	GCAGC	4 cut(s)	298, 705, 963, 1298
BstV2I	GAAGAC	2 cut(s)	1002, 1536
BstX2I	RGATCY	5 cut(s)	25, 653, 1037, 1105, 1364
BstYI	RGATCY	5 cut(s)	25, 653, 1037, 1105, 1364
Bsu15I	ATCGAT	1 cut(s)	1395
BsuI	GTATCC	1 cut(s)	315
BsuTUI	ATCGAT	1 cut(s)	1395
BtgI	CCRYGG	1 cut(s)	1110
BtgZI	GCGATG	2 cut(s)	737, 822
BtsCI	GGATG	2 cut(s)	1015, 1020
Cac8I	GCNNGC	1 cut(s)	843
CciI	TCATGA	1 cut(s)	868
Cfr10I	RCCGGY	2 cut(s)	280, 1545
Cfr13I	GGNCC	1 cut(s)	970
ClaI	ATCGAT	1 cut(s)	1395
CseI	GACGC	2 cut(s)	570, 1466
Csp6I	GTAC	2 cut(s)	509, 1043
CspAI	ACCGGT	1 cut(s)	1545
CviAII	CATG	4 cut(s)	869, 1006, 1111, 1412
CviQI	GTAC	2 cut(s)	509, 1043
DdeI	CTNAG	5 cut(s)	9, 73, 1209, 1276, 1468
DraI	TTTAAA	1 cut(s)	21
DrdI	GACNNNNNNGTC	1 cut(s)	1463
DseDI	GACNNNNNNGTC	1 cut(s)	1463
Eam1104I	CTCTTC	5 cut(s)	233, 475, 921, 1167, 1230
EarI	CTCTTC	5 cut(s)	233, 475, 921, 1167, 1230
Eco105I	TACGTA	1 cut(s)	512
Eco130I	CCWWGG	1 cut(s)	1110
Eco31I	GGTCTC	1 cut(s)	1136
Eco32I	GATATC	1 cut(s)	1486
Eco47I	GGWCC	1 cut(s)	970
Eco57I	CTGAAG	2 cut(s)	1018, 1344
Eco88I	CYCGRG	1 cut(s)	1118
EcoRV	GATATC	1 cut(s)	1486
EcoT14I	CCWWGG	1 cut(s)	1110
ErhI	CCWWGG	1 cut(s)	1110
Esp3I	CGTCTC	2 cut(s)	12, 1466
FaeI	CATG	4 cut(s)	872, 1009, 1114, 1415
FalI	AAGNNNNNCTT	2 cut(s)	15, 47
FaqI	GGGAC	1 cut(s)	674
FatI	CATG	4 cut(s)	868, 1005, 1110, 1411
FauI	CCCGC	1 cut(s)	1090
Fnu4HI	GCNGC	9 cut(s)	172, 312, 439, 442, 694, 846, 952, 1287, 1329
FokI	GGATG	2 cut(s)	1007, 1022
Fsp4HI	GCNGC	9 cut(s)	172, 312, 439, 442, 694, 846, 952, 1287, 1329
FspBI	CTAG	2 cut(s)	305, 914
GluI	GCNGC	9 cut(s)	172, 312, 439, 442, 694, 846, 952, 1287, 1329
HapII	CCGG	5 cut(s)	281, 418, 503, 1253, 1546
HgaI	GACGC	2 cut(s)	570, 1466
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	4 cut(s)	872, 1009, 1114, 1415
HindIII	AAGCTT	1 cut(s)	1073
HinfI	GANTC	4 cut(s)	200, 497, 1083, 1382
HpaII	CCGG	5 cut(s)	281, 418, 503, 1253, 1546
HphI	GGTGA	2 cut(s)	234, 1328
Hpy99I	CGWCG	4 cut(s)	84, 682, 1316, 1460
HpyAV	CCTTC	2 cut(s)	1035, 1250
HpyCH4III	ACNGT	5 cut(s)	51, 707, 737, 1316, 1477
HpyCH4IV	ACGT	7 cut(s)	82, 102, 511, 538, 663, 677, 760
HpyCH4V	TGCA	1 cut(s)	1286
HpyF10VI	GCNNNNNNNGC	6 cut(s)	290, 374, 435, 693, 1328, 1337
HpyF3I	CTNAG	5 cut(s)	9, 73, 1209, 1276, 1468
HpySE526I	ACGT	7 cut(s)	82, 102, 511, 538, 663, 677, 760
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	4 cut(s)	872, 1009, 1114, 1415
Kpn2I	TCCGGA	1 cut(s)	1252
LmnI	GCTCC	1 cut(s)	252
Lsp1109I	GCAGC	4 cut(s)	298, 705, 963, 1298
LweI	GCATC	1 cut(s)	1066
MaeI	CTAG	2 cut(s)	305, 914
MaeII	ACGT	7 cut(s)	82, 102, 511, 538, 663, 677, 760
MaeIII	GTNAC	6 cut(s)	65, 103, 240, 520, 539, 637
MflI	RGATCY	5 cut(s)	25, 653, 1037, 1105, 1364
MluCI	AATT	3 cut(s)	829, 1295, 1520
MluI	ACGCGT	1 cut(s)	375
MlyI	GAGTC	1 cut(s)	1391
MmeI	TCCRAC	1 cut(s)	1113
MroI	TCCGGA	1 cut(s)	1252
MroXI	GAANNNNTTC	3 cut(s)	51, 292, 999
MseI	TTAA	3 cut(s)	20, 477, 1221
MslI	CAYNNNNRTG	2 cut(s)	1004, 1008
MspA1I	CMGCKG	1 cut(s)	438
MspI	CCGG	5 cut(s)	281, 418, 503, 1253, 1546
MvnI	CGCG	7 cut(s)	163, 263, 377, 429, 459, 581, 1331
MwoI	GCNNNNNNNGC	6 cut(s)	290, 374, 435, 693, 1328, 1337
NcoI	CCATGG	1 cut(s)	1110
NlaIII	CATG	4 cut(s)	872, 1009, 1114, 1415
NlaIV	GGNNCC	2 cut(s)	254, 972
NmuCI	GTSAC	2 cut(s)	240, 520
NspV	TTCGAA	2 cut(s)	231, 672
PaeR7I	CTCGAG	1 cut(s)	1118
PagI	TCATGA	1 cut(s)	868
PcsI	WCGNNNNNNNCGW	2 cut(s)	267, 669
PdmI	GAANNNNTTC	3 cut(s)	51, 292, 999
PfeI	GAWTC	3 cut(s)	200, 497, 1083
PinAI	ACCGGT	1 cut(s)	1545
PkrI	GCNGC	9 cut(s)	173, 313, 440, 443, 695, 847, 953, 1288, 1330
PleI	GAGTC	1 cut(s)	1390
PpsI	GAGTC	1 cut(s)	1390
Ppu21I	YACGTR	2 cut(s)	103, 512
PsiI	TTATAA	1 cut(s)	1205
Psp1406I	AACGTT	1 cut(s)	760
PspN4I	GGNNCC	2 cut(s)	254, 972
PspPI	GGNCC	1 cut(s)	970
PsuI	RGATCY	5 cut(s)	25, 653, 1037, 1105, 1364
RsaI	GTAC	2 cut(s)	510, 1044
RsaNI	GTAC	2 cut(s)	509, 1043
RseI	CAYNNNNRTG	2 cut(s)	1004, 1008
SaqAI	TTAA	3 cut(s)	20, 477, 1221
SatI	GCNGC	9 cut(s)	172, 312, 439, 442, 694, 846, 952, 1287, 1329
Sau96I	GGNCC	1 cut(s)	970
SchI	GAGTC	1 cut(s)	1391
SfaNI	GCATC	1 cut(s)	1066
SfcI	CTRYAG	1 cut(s)	1067
Sfr274I	CTCGAG	1 cut(s)	1118
SfuI	TTCGAA	2 cut(s)	231, 672
SinI	GGWCC	1 cut(s)	970
SlaI	CTCGAG	1 cut(s)	1118
SmiMI	CAYNNNNRTG	2 cut(s)	1004, 1008
SmlI	CTYRAG	2 cut(s)	236, 1118
SmoI	CTYRAG	2 cut(s)	236, 1118
SnaBI	TACGTA	1 cut(s)	512
Sse9I	AATT	3 cut(s)	829, 1295, 1520
SsiI	CCGC	9 cut(s)	172, 314, 438, 441, 813, 845, 1097, 1329, 1539
SspMI	CTAG	2 cut(s)	305, 914
StyI	CCWWGG	1 cut(s)	1110
TaaI	ACNGT	5 cut(s)	51, 707, 737, 1316, 1477
TaiI	ACGT	7 cut(s)	85, 105, 514, 541, 666, 680, 763
TaqI	TCGA	9 cut(s)	231, 672, 680, 1086, 1119, 1311, 1395, 1407, 1488
TaqII	GACCGA	2 cut(s)	93, 1160
TasI	AATT	3 cut(s)	829, 1295, 1520
TatI	WGTACW	1 cut(s)	1042
TauI	GCSGC	5 cut(s)	174, 441, 444, 848, 1331
TfiI	GAWTC	3 cut(s)	200, 497, 1083
Tru1I	TTAA	3 cut(s)	20, 477, 1221
Tru9I	TTAA	3 cut(s)	20, 477, 1221
TseFI	GTSAC	2 cut(s)	240, 520
TseI	GCWGC	4 cut(s)	311, 693, 951, 1286
Tsp45I	GTSAC	2 cut(s)	240, 520
TspDTI	ATGAA	4 cut(s)	746, 770, 906, 1193
TspGWI	ACGGA	3 cut(s)	185, 616, 660
VpaK11BI	GGWCC	1 cut(s)	970
XapI	RAATTY	1 cut(s)	829
XhoI	CTCGAG	1 cut(s)	1118
XmnI	GAANNNNTTC	3 cut(s)	51, 292, 999
XspI	CTAG	2 cut(s)	305, 914

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.