Prupe.7G115800_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
14105693 .. 14109316
3624 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G115800.1

Sequence Viewer

Length: 1638 bp
ATGATCAATATGGCTCAGAAGCATTTACATGAGCTGCTCAAAGAAGATCAAGAGCCGTTTCTTCTCAAGAACTACATTGCTGATAAACGTTGCCAGCTGAAAAGACCCTCCCCAAAAACCCATTTGCAGGTCAAAAAACGCAGACCCATCTCCCAAGTTTCAAACTTTCCCGGAAACCTCTGCAAAAACGCTTGCCTTTTCTCTTTCCATGACTCTCCGGACCTCCGAAAATCTCCACTCTTTGAGTTTCCATCACCAGCAGCCAGAAGCCCATGCAAGAGTCCCAATGCCATTTTTCTTCAAATCCCAAATAGAACCGCAGCTCTGCTTGTCGAAGCTGCTATGAGGATTCAGAAACAGTCATCATCTTCAAAACCCAAAACCCAGAACAAAAATCACAGCTTTGGGCTATTTGGCTCGTTTTTGAAGAGACTAACAAATCGAAATCGAACCCAAAAGCGAGAAATCAGAGGGGATGGGGTTAAGGTCTCTGTTAAGGACATTCTTAGGTGGGATTCATCAGTTGGGCGTAGAAAGGTTTCCAATGAGGAAAAGATTGAGTCTTGTTTGGCTGTTGAGGAGCAAACTGCTTCTGAGATAAGCACTGGTTGTGAGGTGTGCTTTTCTTCTTCTTCTTGCACTGGTAGGCCCAGCAGTGCAGTGTGGTCTGAAACCAACGAAGACAAGTCTTTGGATTTAGATACTGCCTCAAGTAGCAGCCAGTCTGAGGACTCAGAAGTGATTGAGTTTGAGACCCAACAAAGCGTAGATTCAGCTTGTCTTTGCAATTGTGAGAAGATCAACAATGGCTTCTGTGATAGCCCTTTTCGTTTCGTGCTCCAAACAACACCCTCGCCGTCCGGCCACCGGACGCCGGAGTTTTCATCGCCGGCGGCGTCTCCTAGTCGCCACAAACAAGAGGAGGAGGGACTGAAGAAATTCCAAGTAGAAGAAGAGGAAGAGGAAGATAAGGAGCAGTGCAGTCCTGTTTCTGTATTGGACCCTCCATTCCAAGACGATGACGAGGGATGTGACGGTGACGGTGACGGTGACGATGAAGACGGTTTTGATTTGGAGTGCAGCTATGCCAATGTACAGAGAACAAAGAATCAGCTACTGCAGAAGCTTCGTAGATTTGAGAAATTGGCAGGGTTGGATCCAATTGAACTCGAAAAAAGAATGTCAGAAGAAGAAGATGATGATGAATATAACATGGATCATCTAGAAGGGCAATCAGAACAATATGACGACGATGAATCAGAAACATCAGATAGCAGGATGGAAGAAAGTCTTGATGAGCTTGTCAGAGAAATACTTTCCCAATCAAACTTCCATTGTATCCGAAAAAGAATCCCGGAAGACGTGAAGAGGTTAGTCTCAGATCTCATTGTTGAGGAACAGAAAGAAGAAGCTGCTTTTAGTGACGAGAGAGTAGTGGTGGTGAGAAGGGTCTGCGAGAGATTTGAGTCCTGGAAAGAGGTGGAATCTAACACCATTGACATGATGGTGGAGCAAGATTTCAGAAAGGAGCTTGATGGGTGGAAGAAAAATCAAGACCAAGTGGGAGAGACTGCAATGGAGATTGAGGTTGCCATCTTTGCCCTACTGGTGGATGAATTGGCAATGGAGCTAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

546

Amino Acids

62.06

Weight (kDa)

4.77

Isoelectric Point (pI)

78.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 118
AccIII TCCGGA 1 cut(s) 217
AciI CCGC 2 cut(s) 318, 893
AclI AACGTT 1 cut(s) 88
AclWI GGATC 3 cut(s) 1151, 1164, 1224
AcoI YGGCCR 1 cut(s) 862
AcsI RAATTY 1 cut(s) 938
AcuI CTGAAG 1 cut(s) 953
AcyI GRCGYC 2 cut(s) 872, 896
AfaI GTAC 1 cut(s) 1095
AfiI CCNNNNNNNGG 5 cut(s) 127, 727, 867, 874, 1609
AgsI TTSAA 5 cut(s) 162, 302, 372, 427, 1166
AjiI CACGTC 1 cut(s) 1363
AjnI CCWGG 1 cut(s) 1469
Alw21I GWGCWC 1 cut(s) 840
Alw26I GTCTC 6 cut(s) 424, 493, 746, 903, 1381, 1562
AlwI GGATC 3 cut(s) 1151, 1164, 1224
AlwNI CAGNNNCTG 1 cut(s) 1117
Aor13HI TCCGGA 1 cut(s) 217
AoxI GGCC 2 cut(s) 647, 862
ApeKI GCWGC 7 cut(s) 34, 260, 320, 338, 717, 1080, 1412
ApoI RAATTY 1 cut(s) 938
Asp700I GAANNNNTTC 2 cut(s) 538, 938
AspS9I GGNCC 3 cut(s) 220, 648, 1000
AsuC2I CCSGG 2 cut(s) 171, 1355
AsuHPI GGTGA 5 cut(s) 246, 1049, 1055, 1061, 1453
AvaII GGWCC 2 cut(s) 220, 1000
BamHI GGATCC 1 cut(s) 1156
BbsI GAAGAC 3 cut(s) 687, 1065, 1365
Bbv12I GWGCWC 1 cut(s) 840
BbvI GCAGC 7 cut(s) 21, 272, 325, 332, 729, 1092, 1399
BccI CCATC 7 cut(s) 155, 259, 470, 1273, 1498, 1529, 1601
BceAI ACGGC 2 cut(s) 40, 841
BcgI CGANNNNNNTGC 2 cut(s) 1109, 1143
BciT130I CCWGG 1 cut(s) 1471
BciVI GTATCC 1 cut(s) 1349
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 2 cut(s) 171, 1355
BcoDI GTCTC 6 cut(s) 424, 493, 746, 903, 1381, 1562
BfaI CTAG 3 cut(s) 903, 1223, 1631
BfmI CTRYAG 1 cut(s) 1118
BfuAI ACCTGC 1 cut(s) 118
BfuI GTATCC 1 cut(s) 1349
BglII AGATCT 1 cut(s) 1381
BisI GCNGC 8 cut(s) 35, 261, 321, 339, 718, 894, 1081, 1413
BlsI GCNGC 8 cut(s) 36, 262, 322, 340, 719, 895, 1082, 1414
Bme1390I CCNGG 3 cut(s) 171, 1355, 1471
Bme18I GGWCC 2 cut(s) 220, 1000
BmgBI CACGTC 1 cut(s) 1363
BmgT120I GGNCC 3 cut(s) 220, 648, 1000
BmiI GGNNCC 2 cut(s) 1002, 1158
BmrFI CCNGG 3 cut(s) 171, 1355, 1471
BpiI GAAGAC 3 cut(s) 687, 1065, 1365
BpuEI CTTGAG 2 cut(s) 50, 694
BpuMI CCSGG 2 cut(s) 171, 1355
BsaHI GRCGYC 2 cut(s) 872, 896
BsaI GGTCTC 2 cut(s) 493, 746
BsaWI WCCGGW 2 cut(s) 217, 867
Bsc4I CCNNNNNNNGG 5 cut(s) 127, 727, 867, 874, 1609
Bse118I RCCGGY 1 cut(s) 889
Bse1I ACTGG 4 cut(s) 610, 646, 721, 1611
Bse3DI GCAATG 3 cut(s) 75, 1581, 1629
BseAI TCCGGA 1 cut(s) 217
BseBI CCWGG 1 cut(s) 1471
BseGI GGATG 4 cut(s) 481, 1034, 1284, 1618
BseLI CCNNNNNNNGG 5 cut(s) 127, 727, 867, 874, 1609
BseMI GCAATG 3 cut(s) 75, 1581, 1629
BseMII CTCAG 5 cut(s) 29, 585, 717, 747, 1392
BseNI ACTGG 4 cut(s) 610, 646, 721, 1611
BseRI GAGGAG 3 cut(s) 593, 935, 938
BseXI GCAGC 7 cut(s) 21, 272, 325, 332, 729, 1092, 1399
BseYI CCCAGC 1 cut(s) 650
BsgI GTGCAG 3 cut(s) 678, 1000, 1099
BshFI GGCC 2 cut(s) 649, 864
BsiHKAI GWGCWC 1 cut(s) 840
BsiSI CCGG 7 cut(s) 171, 218, 861, 868, 875, 890, 1355
BslFI GGGAC 2 cut(s) 267, 942
BslI CCNNNNNNNGG 5 cut(s) 127, 727, 867, 874, 1609
BsmAI GTCTC 6 cut(s) 424, 493, 746, 903, 1381, 1562
BsmBI CGTCTC 1 cut(s) 903
BsmFI GGGAC 2 cut(s) 267, 942
BsnI GGCC 2 cut(s) 649, 864
Bso31I GGTCTC 2 cut(s) 493, 746
Bsp1286I GDGCHC 1 cut(s) 840
Bsp13I TCCGGA 1 cut(s) 217
Bsp1407I TGTACA 1 cut(s) 1093
Bsp143I GATC 6 cut(s) 3, 46, 798, 1156, 1216, 1381
BspACI CCGC 2 cut(s) 318, 893
BspANI GGCC 2 cut(s) 649, 864
BspCNI CTCAG 5 cut(s) 28, 586, 718, 746, 1391
BspEI TCCGGA 1 cut(s) 217
BspLI GGNNCC 2 cut(s) 1002, 1158
BspMAI CTGCAG 1 cut(s) 1122
BspMI ACCTGC 1 cut(s) 118
BspPI GGATC 3 cut(s) 1151, 1164, 1224
BspTNI GGTCTC 2 cut(s) 493, 746
BsrDI GCAATG 3 cut(s) 75, 1581, 1629
BsrFI RCCGGY 1 cut(s) 889
BsrGI TGTACA 1 cut(s) 1093
BsrI ACTGG 4 cut(s) 610, 646, 721, 1611
BssAI RCCGGY 1 cut(s) 889
BssMI GATC 6 cut(s) 3, 46, 798, 1156, 1216, 1381
BssNI GRCGYC 2 cut(s) 872, 896
Bst2UI CCWGG 1 cut(s) 1471
Bst4CI ACNGT 5 cut(s) 360, 1037, 1043, 1049, 1064
Bst6I CTCTTC 4 cut(s) 422, 948, 954, 1361
BstACI GRCGYC 2 cut(s) 872, 896
BstAUI TGTACA 1 cut(s) 1093
BstC8I GCNNGC 3 cut(s) 95, 193, 891
BstDEI CTNAG 6 cut(s) 15, 506, 594, 726, 733, 1378
BstF5I GGATG 4 cut(s) 481, 1034, 1284, 1618
BstKTI GATC 6 cut(s) 6, 49, 801, 1159, 1219, 1384
BstMAI GTCTC 6 cut(s) 424, 493, 746, 903, 1381, 1562
BstMBI GATC 6 cut(s) 3, 46, 798, 1156, 1216, 1381
BstMWI GCNNNNNNNGC 1 cut(s) 1598
BstNI CCWGG 1 cut(s) 1471
BstSCI CCNGG 3 cut(s) 169, 1353, 1469
BstSFI CTRYAG 1 cut(s) 1118
BstV1I GCAGC 7 cut(s) 21, 272, 325, 332, 729, 1092, 1399
BstV2I GAAGAC 3 cut(s) 687, 1065, 1365
BstX2I RGATCY 2 cut(s) 1156, 1381
BstYI RGATCY 2 cut(s) 1156, 1381
BsuI GTATCC 1 cut(s) 1349
BsuRI GGCC 2 cut(s) 649, 864
BtgZI GCGATG 1 cut(s) 870
BtrI CACGTC 1 cut(s) 1363
BtsCI GGATG 4 cut(s) 481, 1034, 1284, 1618
BtsI GCAGTG 3 cut(s) 661, 666, 983
BtsIMutI CAGTG 5 cut(s) 603, 639, 661, 666, 983
BveI ACCTGC 1 cut(s) 118
Cac8I GCNNGC 3 cut(s) 95, 193, 891
CaiI CAGNNNCTG 1 cut(s) 1117
Cfr10I RCCGGY 1 cut(s) 889
Cfr13I GGNCC 3 cut(s) 220, 648, 1000
CseI GACGC 2 cut(s) 880, 885
Csp6I GTAC 1 cut(s) 1094
CviAII CATG 5 cut(s) 29, 209, 273, 1213, 1501
CviQI GTAC 1 cut(s) 1094
DdeI CTNAG 6 cut(s) 15, 506, 594, 726, 733, 1378
DpnI GATC 6 cut(s) 5, 48, 800, 1158, 1218, 1383
DpnII GATC 6 cut(s) 3, 46, 798, 1156, 1216, 1381
EaeI YGGCCR 1 cut(s) 862
Eam1104I CTCTTC 4 cut(s) 422, 948, 954, 1361
EarI CTCTTC 4 cut(s) 422, 948, 954, 1361
Eco31I GGTCTC 2 cut(s) 493, 746
Eco47I GGWCC 2 cut(s) 220, 1000
Eco57I CTGAAG 1 cut(s) 953
EcoRII CCWGG 1 cut(s) 1469
Esp3I CGTCTC 1 cut(s) 903
FaeI CATG 5 cut(s) 32, 212, 276, 1216, 1504
FalI AAGNNNNNCTT 2 cut(s) 1275, 1307
FaqI GGGAC 2 cut(s) 267, 942
FatI CATG 5 cut(s) 28, 208, 272, 1212, 1500
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 8 cut(s) 35, 261, 321, 339, 718, 894, 1081, 1413
FokI GGATG 4 cut(s) 488, 1041, 1291, 1625
Fsp4HI GCNGC 8 cut(s) 35, 261, 321, 339, 718, 894, 1081, 1413
FspBI CTAG 3 cut(s) 903, 1223, 1631
GluI GCNGC 8 cut(s) 35, 261, 321, 339, 718, 894, 1081, 1413
GsaI CCCAGC 1 cut(s) 654
HaeIII GGCC 2 cut(s) 649, 864
HapII CCGG 7 cut(s) 171, 218, 861, 868, 875, 890, 1355
HgaI GACGC 2 cut(s) 880, 885
Hin1I GRCGYC 2 cut(s) 872, 896
Hin1II CATG 5 cut(s) 32, 212, 276, 1216, 1504
HindIII AAGCTT 1 cut(s) 1124
HpaII CCGG 7 cut(s) 171, 218, 861, 868, 875, 890, 1355
HphI GGTGA 5 cut(s) 246, 1049, 1055, 1061, 1453
Hpy188III TCNNGA 6 cut(s) 50, 67, 218, 1223, 1292, 1553
Hpy99I CGWCG 1 cut(s) 1253
HpyAV CCTTC 2 cut(s) 1220, 1440
HpyCH4III ACNGT 5 cut(s) 360, 1037, 1043, 1049, 1064
HpyCH4IV ACGT 2 cut(s) 88, 1362
HpyF10VI GCNNNNNNNGC 1 cut(s) 1598
HpyF3I CTNAG 6 cut(s) 15, 506, 594, 726, 733, 1378
HpySE526I ACGT 2 cut(s) 88, 1362
Hsp92I GRCGYC 2 cut(s) 872, 896
Hsp92II CATG 5 cut(s) 32, 212, 276, 1216, 1504
Kpn2I TCCGGA 1 cut(s) 217
KroI GCCGGC 1 cut(s) 889
KroNI GCCGGC 1 cut(s) 891
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 6 cut(s) 3, 46, 798, 1156, 1216, 1381
LmnI GCTCC 6 cut(s) 580, 843, 973, 1510, 1528, 1627
Lsp1109I GCAGC 7 cut(s) 21, 272, 325, 332, 729, 1092, 1399
MaeI CTAG 3 cut(s) 903, 1223, 1631
MaeII ACGT 2 cut(s) 88, 1362
MaeIII GTNAC 5 cut(s) 1031, 1037, 1043, 1049, 1421
MalI GATC 6 cut(s) 5, 48, 800, 1158, 1218, 1383
MboI GATC 6 cut(s) 3, 46, 798, 1156, 1216, 1381
MfeI CAATTG 2 cut(s) 787, 1161
MflI RGATCY 2 cut(s) 1156, 1381
MhlI GDGCHC 1 cut(s) 840
MluCI AATT 5 cut(s) 787, 938, 1142, 1161, 1616
MlyI GAGTC 5 cut(s) 206, 289, 569, 725, 1475
MmeI TCCRAC 1 cut(s) 1134
MreI CGCCGGCG 1 cut(s) 889
MroI TCCGGA 1 cut(s) 217
MroNI GCCGGC 1 cut(s) 889
MroXI GAANNNNTTC 2 cut(s) 538, 938
MseI TTAA 2 cut(s) 483, 495
MslI CAYNNNNRTG 3 cut(s) 27, 1499, 1505
MspA1I CMGCKG 1 cut(s) 97
MspI CCGG 7 cut(s) 171, 218, 861, 868, 875, 890, 1355
MspR9I CCNGG 3 cut(s) 171, 1355, 1471
MunI CAATTG 2 cut(s) 787, 1161
MvaI CCWGG 1 cut(s) 1471
MwoI GCNNNNNNNGC 1 cut(s) 1598
NaeI GCCGGC 1 cut(s) 891
NciI CCSGG 2 cut(s) 171, 1355
NdeII GATC 6 cut(s) 3, 46, 798, 1156, 1216, 1381
NgoMIV GCCGGC 1 cut(s) 889
NlaIII CATG 5 cut(s) 32, 212, 276, 1216, 1504
NlaIV GGNNCC 2 cut(s) 1002, 1158
NmuCI GTSAC 5 cut(s) 1031, 1037, 1043, 1049, 1421
PcsI WCGNNNNNNNCGW 1 cut(s) 893
PdiI GCCGGC 1 cut(s) 891
PdmI GAANNNNTTC 2 cut(s) 538, 938
PfeI GAWTC 7 cut(s) 349, 515, 770, 1108, 1256, 1350, 1484
PfoI TCCNGGA 3 cut(s) 169, 1353, 1469
PkrI GCNGC 8 cut(s) 36, 262, 322, 340, 719, 895, 1082, 1414
PleI GAGTC 5 cut(s) 206, 288, 568, 725, 1474
PpsI GAGTC 5 cut(s) 206, 288, 568, 725, 1474
Psp1406I AACGTT 1 cut(s) 88
Psp6I CCWGG 1 cut(s) 1469
PspFI CCCAGC 1 cut(s) 650
PspGI CCWGG 1 cut(s) 1469
PspN4I GGNNCC 2 cut(s) 1002, 1158
PspPI GGNCC 3 cut(s) 220, 648, 1000
PstI CTGCAG 1 cut(s) 1122
PstNI CAGNNNCTG 1 cut(s) 1117
PsuI RGATCY 2 cut(s) 1156, 1381
PvuII CAGCTG 1 cut(s) 97
RsaI GTAC 1 cut(s) 1095
RsaNI GTAC 1 cut(s) 1094
RseI CAYNNNNRTG 3 cut(s) 27, 1499, 1505
SaqAI TTAA 2 cut(s) 483, 495
SatI GCNGC 8 cut(s) 35, 261, 321, 339, 718, 894, 1081, 1413
Sau3AI GATC 6 cut(s) 3, 46, 798, 1156, 1216, 1381
Sau96I GGNCC 3 cut(s) 220, 648, 1000
SchI GAGTC 5 cut(s) 206, 289, 569, 725, 1475
ScrFI CCNGG 3 cut(s) 171, 1355, 1471
SduI GDGCHC 1 cut(s) 840
SfcI CTRYAG 1 cut(s) 1118
SgrAI CRCCGGYG 1 cut(s) 889
SinI GGWCC 2 cut(s) 220, 1000
SmiMI CAYNNNNRTG 3 cut(s) 27, 1499, 1505
SmlI CTYRAG 2 cut(s) 65, 709
SmoI CTYRAG 2 cut(s) 65, 709
Sse9I AATT 5 cut(s) 787, 938, 1142, 1161, 1616
SsiI CCGC 2 cut(s) 318, 893
SspMI CTAG 3 cut(s) 903, 1223, 1631
StyD4I CCNGG 3 cut(s) 169, 1353, 1469
TaaI ACNGT 5 cut(s) 360, 1037, 1043, 1049, 1064
TaiI ACGT 2 cut(s) 91, 1365
TaqI TCGA 4 cut(s) 333, 442, 448, 1170
TasI AATT 5 cut(s) 787, 938, 1142, 1161, 1616
TatI WGTACW 1 cut(s) 1093
TauI GCSGC 1 cut(s) 896
TfiI GAWTC 7 cut(s) 349, 515, 770, 1108, 1256, 1350, 1484
Tru1I TTAA 2 cut(s) 483, 495
Tru9I TTAA 2 cut(s) 483, 495
TscAI CASTG 5 cut(s) 610, 646, 661, 666, 983
TseFI GTSAC 5 cut(s) 1031, 1037, 1043, 1049, 1421
TseI GCWGC 7 cut(s) 34, 260, 320, 338, 717, 1080, 1412
Tsp45I GTSAC 5 cut(s) 1031, 1037, 1043, 1049, 1421
TspDTI ATGAA 6 cut(s) 507, 873, 1071, 1218, 1269, 1629
TspRI CASTG 5 cut(s) 610, 646, 661, 666, 983
VpaK11BI GGWCC 2 cut(s) 220, 1000
XapI RAATTY 1 cut(s) 938
XbaI TCTAGA 1 cut(s) 1222
XcmI CCANNNNNNNNNTGG 1 cut(s) 1501
XmnI GAANNNNTTC 2 cut(s) 538, 938
XspI CTAG 3 cut(s) 903, 1223, 1631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.