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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G03670 AT5G03670 |
| fragaria_vesca | FvH4_6g18100 |
| malus_domestica | MD12G1019500.v1.1 MD14G1017300.v1.1 |
| prunus_persica | Prupe.7G115800_v2.0.a1 |
| pyrus_communis | pycom12g01650 pycom14g01520 |
| rosa_chinensis | RchiOBHm_Chr3g0472371 |
| rosa_laevigata | RLG00000024084 |
| rosa_multiflora | Rmu_sc0000627.1_g000009 Rmu_sc0000798.1_g000016 |
| rosa_roxburghii | Rroxscaffold_4G00299320 Rroxscaffold_6G00408980 |
| rosa_rugosa | Rorug03G0124400 |
| rosa_samantha | Rh3AG176800 Rh3BG202700 Rh3CG193000 Rh3CG200200 Rh3DG172400 |
| rosa_wichuraiana | Rw3G016470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 118 |
| AccIII | TCCGGA | 1 cut(s) | 217 |
| AciI | CCGC | 2 cut(s) | 318, 893 |
| AclI | AACGTT | 1 cut(s) | 88 |
| AclWI | GGATC | 3 cut(s) | 1151, 1164, 1224 |
| AcoI | YGGCCR | 1 cut(s) | 862 |
| AcsI | RAATTY | 1 cut(s) | 938 |
| AcuI | CTGAAG | 1 cut(s) | 953 |
| AcyI | GRCGYC | 2 cut(s) | 872, 896 |
| AfaI | GTAC | 1 cut(s) | 1095 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 127, 727, 867, 874, 1609 |
| AgsI | TTSAA | 5 cut(s) | 162, 302, 372, 427, 1166 |
| AjiI | CACGTC | 1 cut(s) | 1363 |
| AjnI | CCWGG | 1 cut(s) | 1469 |
| Alw21I | GWGCWC | 1 cut(s) | 840 |
| Alw26I | GTCTC | 6 cut(s) | 424, 493, 746, 903, 1381, 1562 |
| AlwI | GGATC | 3 cut(s) | 1151, 1164, 1224 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1117 |
| Aor13HI | TCCGGA | 1 cut(s) | 217 |
| AoxI | GGCC | 2 cut(s) | 647, 862 |
| ApeKI | GCWGC | 7 cut(s) | 34, 260, 320, 338, 717, 1080, 1412 |
| ApoI | RAATTY | 1 cut(s) | 938 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 538, 938 |
| AspS9I | GGNCC | 3 cut(s) | 220, 648, 1000 |
| AsuC2I | CCSGG | 2 cut(s) | 171, 1355 |
| AsuHPI | GGTGA | 5 cut(s) | 246, 1049, 1055, 1061, 1453 |
| AvaII | GGWCC | 2 cut(s) | 220, 1000 |
| BamHI | GGATCC | 1 cut(s) | 1156 |
| BbsI | GAAGAC | 3 cut(s) | 687, 1065, 1365 |
| Bbv12I | GWGCWC | 1 cut(s) | 840 |
| BbvI | GCAGC | 7 cut(s) | 21, 272, 325, 332, 729, 1092, 1399 |
| BccI | CCATC | 7 cut(s) | 155, 259, 470, 1273, 1498, 1529, 1601 |
| BceAI | ACGGC | 2 cut(s) | 40, 841 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1109, 1143 |
| BciT130I | CCWGG | 1 cut(s) | 1471 |
| BciVI | GTATCC | 1 cut(s) | 1349 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BcnI | CCSGG | 2 cut(s) | 171, 1355 |
| BcoDI | GTCTC | 6 cut(s) | 424, 493, 746, 903, 1381, 1562 |
| BfaI | CTAG | 3 cut(s) | 903, 1223, 1631 |
| BfmI | CTRYAG | 1 cut(s) | 1118 |
| BfuAI | ACCTGC | 1 cut(s) | 118 |
| BfuI | GTATCC | 1 cut(s) | 1349 |
| BglII | AGATCT | 1 cut(s) | 1381 |
| BisI | GCNGC | 8 cut(s) | 35, 261, 321, 339, 718, 894, 1081, 1413 |
| BlsI | GCNGC | 8 cut(s) | 36, 262, 322, 340, 719, 895, 1082, 1414 |
| Bme1390I | CCNGG | 3 cut(s) | 171, 1355, 1471 |
| Bme18I | GGWCC | 2 cut(s) | 220, 1000 |
| BmgBI | CACGTC | 1 cut(s) | 1363 |
| BmgT120I | GGNCC | 3 cut(s) | 220, 648, 1000 |
| BmiI | GGNNCC | 2 cut(s) | 1002, 1158 |
| BmrFI | CCNGG | 3 cut(s) | 171, 1355, 1471 |
| BpiI | GAAGAC | 3 cut(s) | 687, 1065, 1365 |
| BpuEI | CTTGAG | 2 cut(s) | 50, 694 |
| BpuMI | CCSGG | 2 cut(s) | 171, 1355 |
| BsaHI | GRCGYC | 2 cut(s) | 872, 896 |
| BsaI | GGTCTC | 2 cut(s) | 493, 746 |
| BsaWI | WCCGGW | 2 cut(s) | 217, 867 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 127, 727, 867, 874, 1609 |
| Bse118I | RCCGGY | 1 cut(s) | 889 |
| Bse1I | ACTGG | 4 cut(s) | 610, 646, 721, 1611 |
| Bse3DI | GCAATG | 3 cut(s) | 75, 1581, 1629 |
| BseAI | TCCGGA | 1 cut(s) | 217 |
| BseBI | CCWGG | 1 cut(s) | 1471 |
| BseGI | GGATG | 4 cut(s) | 481, 1034, 1284, 1618 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 127, 727, 867, 874, 1609 |
| BseMI | GCAATG | 3 cut(s) | 75, 1581, 1629 |
| BseMII | CTCAG | 5 cut(s) | 29, 585, 717, 747, 1392 |
| BseNI | ACTGG | 4 cut(s) | 610, 646, 721, 1611 |
| BseRI | GAGGAG | 3 cut(s) | 593, 935, 938 |
| BseXI | GCAGC | 7 cut(s) | 21, 272, 325, 332, 729, 1092, 1399 |
| BseYI | CCCAGC | 1 cut(s) | 650 |
| BsgI | GTGCAG | 3 cut(s) | 678, 1000, 1099 |
| BshFI | GGCC | 2 cut(s) | 649, 864 |
| BsiHKAI | GWGCWC | 1 cut(s) | 840 |
| BsiSI | CCGG | 7 cut(s) | 171, 218, 861, 868, 875, 890, 1355 |
| BslFI | GGGAC | 2 cut(s) | 267, 942 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 127, 727, 867, 874, 1609 |
| BsmAI | GTCTC | 6 cut(s) | 424, 493, 746, 903, 1381, 1562 |
| BsmBI | CGTCTC | 1 cut(s) | 903 |
| BsmFI | GGGAC | 2 cut(s) | 267, 942 |
| BsnI | GGCC | 2 cut(s) | 649, 864 |
| Bso31I | GGTCTC | 2 cut(s) | 493, 746 |
| Bsp1286I | GDGCHC | 1 cut(s) | 840 |
| Bsp13I | TCCGGA | 1 cut(s) | 217 |
| Bsp1407I | TGTACA | 1 cut(s) | 1093 |
| Bsp143I | GATC | 6 cut(s) | 3, 46, 798, 1156, 1216, 1381 |
| BspACI | CCGC | 2 cut(s) | 318, 893 |
| BspANI | GGCC | 2 cut(s) | 649, 864 |
| BspCNI | CTCAG | 5 cut(s) | 28, 586, 718, 746, 1391 |
| BspEI | TCCGGA | 1 cut(s) | 217 |
| BspLI | GGNNCC | 2 cut(s) | 1002, 1158 |
| BspMAI | CTGCAG | 1 cut(s) | 1122 |
| BspMI | ACCTGC | 1 cut(s) | 118 |
| BspPI | GGATC | 3 cut(s) | 1151, 1164, 1224 |
| BspTNI | GGTCTC | 2 cut(s) | 493, 746 |
| BsrDI | GCAATG | 3 cut(s) | 75, 1581, 1629 |
| BsrFI | RCCGGY | 1 cut(s) | 889 |
| BsrGI | TGTACA | 1 cut(s) | 1093 |
| BsrI | ACTGG | 4 cut(s) | 610, 646, 721, 1611 |
| BssAI | RCCGGY | 1 cut(s) | 889 |
| BssMI | GATC | 6 cut(s) | 3, 46, 798, 1156, 1216, 1381 |
| BssNI | GRCGYC | 2 cut(s) | 872, 896 |
| Bst2UI | CCWGG | 1 cut(s) | 1471 |
| Bst4CI | ACNGT | 5 cut(s) | 360, 1037, 1043, 1049, 1064 |
| Bst6I | CTCTTC | 4 cut(s) | 422, 948, 954, 1361 |
| BstACI | GRCGYC | 2 cut(s) | 872, 896 |
| BstAUI | TGTACA | 1 cut(s) | 1093 |
| BstC8I | GCNNGC | 3 cut(s) | 95, 193, 891 |
| BstDEI | CTNAG | 6 cut(s) | 15, 506, 594, 726, 733, 1378 |
| BstF5I | GGATG | 4 cut(s) | 481, 1034, 1284, 1618 |
| BstKTI | GATC | 6 cut(s) | 6, 49, 801, 1159, 1219, 1384 |
| BstMAI | GTCTC | 6 cut(s) | 424, 493, 746, 903, 1381, 1562 |
| BstMBI | GATC | 6 cut(s) | 3, 46, 798, 1156, 1216, 1381 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1598 |
| BstNI | CCWGG | 1 cut(s) | 1471 |
| BstSCI | CCNGG | 3 cut(s) | 169, 1353, 1469 |
| BstSFI | CTRYAG | 1 cut(s) | 1118 |
| BstV1I | GCAGC | 7 cut(s) | 21, 272, 325, 332, 729, 1092, 1399 |
| BstV2I | GAAGAC | 3 cut(s) | 687, 1065, 1365 |
| BstX2I | RGATCY | 2 cut(s) | 1156, 1381 |
| BstYI | RGATCY | 2 cut(s) | 1156, 1381 |
| BsuI | GTATCC | 1 cut(s) | 1349 |
| BsuRI | GGCC | 2 cut(s) | 649, 864 |
| BtgZI | GCGATG | 1 cut(s) | 870 |
| BtrI | CACGTC | 1 cut(s) | 1363 |
| BtsCI | GGATG | 4 cut(s) | 481, 1034, 1284, 1618 |
| BtsI | GCAGTG | 3 cut(s) | 661, 666, 983 |
| BtsIMutI | CAGTG | 5 cut(s) | 603, 639, 661, 666, 983 |
| BveI | ACCTGC | 1 cut(s) | 118 |
| Cac8I | GCNNGC | 3 cut(s) | 95, 193, 891 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1117 |
| Cfr10I | RCCGGY | 1 cut(s) | 889 |
| Cfr13I | GGNCC | 3 cut(s) | 220, 648, 1000 |
| CseI | GACGC | 2 cut(s) | 880, 885 |
| Csp6I | GTAC | 1 cut(s) | 1094 |
| CviAII | CATG | 5 cut(s) | 29, 209, 273, 1213, 1501 |
| CviQI | GTAC | 1 cut(s) | 1094 |
| DdeI | CTNAG | 6 cut(s) | 15, 506, 594, 726, 733, 1378 |
| DpnI | GATC | 6 cut(s) | 5, 48, 800, 1158, 1218, 1383 |
| DpnII | GATC | 6 cut(s) | 3, 46, 798, 1156, 1216, 1381 |
| EaeI | YGGCCR | 1 cut(s) | 862 |
| Eam1104I | CTCTTC | 4 cut(s) | 422, 948, 954, 1361 |
| EarI | CTCTTC | 4 cut(s) | 422, 948, 954, 1361 |
| Eco31I | GGTCTC | 2 cut(s) | 493, 746 |
| Eco47I | GGWCC | 2 cut(s) | 220, 1000 |
| Eco57I | CTGAAG | 1 cut(s) | 953 |
| EcoRII | CCWGG | 1 cut(s) | 1469 |
| Esp3I | CGTCTC | 1 cut(s) | 903 |
| FaeI | CATG | 5 cut(s) | 32, 212, 276, 1216, 1504 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1275, 1307 |
| FaqI | GGGAC | 2 cut(s) | 267, 942 |
| FatI | CATG | 5 cut(s) | 28, 208, 272, 1212, 1500 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| Fnu4HI | GCNGC | 8 cut(s) | 35, 261, 321, 339, 718, 894, 1081, 1413 |
| FokI | GGATG | 4 cut(s) | 488, 1041, 1291, 1625 |
| Fsp4HI | GCNGC | 8 cut(s) | 35, 261, 321, 339, 718, 894, 1081, 1413 |
| FspBI | CTAG | 3 cut(s) | 903, 1223, 1631 |
| GluI | GCNGC | 8 cut(s) | 35, 261, 321, 339, 718, 894, 1081, 1413 |
| GsaI | CCCAGC | 1 cut(s) | 654 |
| HaeIII | GGCC | 2 cut(s) | 649, 864 |
| HapII | CCGG | 7 cut(s) | 171, 218, 861, 868, 875, 890, 1355 |
| HgaI | GACGC | 2 cut(s) | 880, 885 |
| Hin1I | GRCGYC | 2 cut(s) | 872, 896 |
| Hin1II | CATG | 5 cut(s) | 32, 212, 276, 1216, 1504 |
| HindIII | AAGCTT | 1 cut(s) | 1124 |
| HpaII | CCGG | 7 cut(s) | 171, 218, 861, 868, 875, 890, 1355 |
| HphI | GGTGA | 5 cut(s) | 246, 1049, 1055, 1061, 1453 |
| Hpy188III | TCNNGA | 6 cut(s) | 50, 67, 218, 1223, 1292, 1553 |
| Hpy99I | CGWCG | 1 cut(s) | 1253 |
| HpyAV | CCTTC | 2 cut(s) | 1220, 1440 |
| HpyCH4III | ACNGT | 5 cut(s) | 360, 1037, 1043, 1049, 1064 |
| HpyCH4IV | ACGT | 2 cut(s) | 88, 1362 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1598 |
| HpyF3I | CTNAG | 6 cut(s) | 15, 506, 594, 726, 733, 1378 |
| HpySE526I | ACGT | 2 cut(s) | 88, 1362 |
| Hsp92I | GRCGYC | 2 cut(s) | 872, 896 |
| Hsp92II | CATG | 5 cut(s) | 32, 212, 276, 1216, 1504 |
| Kpn2I | TCCGGA | 1 cut(s) | 217 |
| KroI | GCCGGC | 1 cut(s) | 889 |
| KroNI | GCCGGC | 1 cut(s) | 891 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 6 cut(s) | 3, 46, 798, 1156, 1216, 1381 |
| LmnI | GCTCC | 6 cut(s) | 580, 843, 973, 1510, 1528, 1627 |
| Lsp1109I | GCAGC | 7 cut(s) | 21, 272, 325, 332, 729, 1092, 1399 |
| MaeI | CTAG | 3 cut(s) | 903, 1223, 1631 |
| MaeII | ACGT | 2 cut(s) | 88, 1362 |
| MaeIII | GTNAC | 5 cut(s) | 1031, 1037, 1043, 1049, 1421 |
| MalI | GATC | 6 cut(s) | 5, 48, 800, 1158, 1218, 1383 |
| MboI | GATC | 6 cut(s) | 3, 46, 798, 1156, 1216, 1381 |
| MfeI | CAATTG | 2 cut(s) | 787, 1161 |
| MflI | RGATCY | 2 cut(s) | 1156, 1381 |
| MhlI | GDGCHC | 1 cut(s) | 840 |
| MluCI | AATT | 5 cut(s) | 787, 938, 1142, 1161, 1616 |
| MlyI | GAGTC | 5 cut(s) | 206, 289, 569, 725, 1475 |
| MmeI | TCCRAC | 1 cut(s) | 1134 |
| MreI | CGCCGGCG | 1 cut(s) | 889 |
| MroI | TCCGGA | 1 cut(s) | 217 |
| MroNI | GCCGGC | 1 cut(s) | 889 |
| MroXI | GAANNNNTTC | 2 cut(s) | 538, 938 |
| MseI | TTAA | 2 cut(s) | 483, 495 |
| MslI | CAYNNNNRTG | 3 cut(s) | 27, 1499, 1505 |
| MspA1I | CMGCKG | 1 cut(s) | 97 |
| MspI | CCGG | 7 cut(s) | 171, 218, 861, 868, 875, 890, 1355 |
| MspR9I | CCNGG | 3 cut(s) | 171, 1355, 1471 |
| MunI | CAATTG | 2 cut(s) | 787, 1161 |
| MvaI | CCWGG | 1 cut(s) | 1471 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1598 |
| NaeI | GCCGGC | 1 cut(s) | 891 |
| NciI | CCSGG | 2 cut(s) | 171, 1355 |
| NdeII | GATC | 6 cut(s) | 3, 46, 798, 1156, 1216, 1381 |
| NgoMIV | GCCGGC | 1 cut(s) | 889 |
| NlaIII | CATG | 5 cut(s) | 32, 212, 276, 1216, 1504 |
| NlaIV | GGNNCC | 2 cut(s) | 1002, 1158 |
| NmuCI | GTSAC | 5 cut(s) | 1031, 1037, 1043, 1049, 1421 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 893 |
| PdiI | GCCGGC | 1 cut(s) | 891 |
| PdmI | GAANNNNTTC | 2 cut(s) | 538, 938 |
| PfeI | GAWTC | 7 cut(s) | 349, 515, 770, 1108, 1256, 1350, 1484 |
| PfoI | TCCNGGA | 3 cut(s) | 169, 1353, 1469 |
| PkrI | GCNGC | 8 cut(s) | 36, 262, 322, 340, 719, 895, 1082, 1414 |
| PleI | GAGTC | 5 cut(s) | 206, 288, 568, 725, 1474 |
| PpsI | GAGTC | 5 cut(s) | 206, 288, 568, 725, 1474 |
| Psp1406I | AACGTT | 1 cut(s) | 88 |
| Psp6I | CCWGG | 1 cut(s) | 1469 |
| PspFI | CCCAGC | 1 cut(s) | 650 |
| PspGI | CCWGG | 1 cut(s) | 1469 |
| PspN4I | GGNNCC | 2 cut(s) | 1002, 1158 |
| PspPI | GGNCC | 3 cut(s) | 220, 648, 1000 |
| PstI | CTGCAG | 1 cut(s) | 1122 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1117 |
| PsuI | RGATCY | 2 cut(s) | 1156, 1381 |
| PvuII | CAGCTG | 1 cut(s) | 97 |
| RsaI | GTAC | 1 cut(s) | 1095 |
| RsaNI | GTAC | 1 cut(s) | 1094 |
| RseI | CAYNNNNRTG | 3 cut(s) | 27, 1499, 1505 |
| SaqAI | TTAA | 2 cut(s) | 483, 495 |
| SatI | GCNGC | 8 cut(s) | 35, 261, 321, 339, 718, 894, 1081, 1413 |
| Sau3AI | GATC | 6 cut(s) | 3, 46, 798, 1156, 1216, 1381 |
| Sau96I | GGNCC | 3 cut(s) | 220, 648, 1000 |
| SchI | GAGTC | 5 cut(s) | 206, 289, 569, 725, 1475 |
| ScrFI | CCNGG | 3 cut(s) | 171, 1355, 1471 |
| SduI | GDGCHC | 1 cut(s) | 840 |
| SfcI | CTRYAG | 1 cut(s) | 1118 |
| SgrAI | CRCCGGYG | 1 cut(s) | 889 |
| SinI | GGWCC | 2 cut(s) | 220, 1000 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 27, 1499, 1505 |
| SmlI | CTYRAG | 2 cut(s) | 65, 709 |
| SmoI | CTYRAG | 2 cut(s) | 65, 709 |
| Sse9I | AATT | 5 cut(s) | 787, 938, 1142, 1161, 1616 |
| SsiI | CCGC | 2 cut(s) | 318, 893 |
| SspMI | CTAG | 3 cut(s) | 903, 1223, 1631 |
| StyD4I | CCNGG | 3 cut(s) | 169, 1353, 1469 |
| TaaI | ACNGT | 5 cut(s) | 360, 1037, 1043, 1049, 1064 |
| TaiI | ACGT | 2 cut(s) | 91, 1365 |
| TaqI | TCGA | 4 cut(s) | 333, 442, 448, 1170 |
| TasI | AATT | 5 cut(s) | 787, 938, 1142, 1161, 1616 |
| TatI | WGTACW | 1 cut(s) | 1093 |
| TauI | GCSGC | 1 cut(s) | 896 |
| TfiI | GAWTC | 7 cut(s) | 349, 515, 770, 1108, 1256, 1350, 1484 |
| Tru1I | TTAA | 2 cut(s) | 483, 495 |
| Tru9I | TTAA | 2 cut(s) | 483, 495 |
| TscAI | CASTG | 5 cut(s) | 610, 646, 661, 666, 983 |
| TseFI | GTSAC | 5 cut(s) | 1031, 1037, 1043, 1049, 1421 |
| TseI | GCWGC | 7 cut(s) | 34, 260, 320, 338, 717, 1080, 1412 |
| Tsp45I | GTSAC | 5 cut(s) | 1031, 1037, 1043, 1049, 1421 |
| TspDTI | ATGAA | 6 cut(s) | 507, 873, 1071, 1218, 1269, 1629 |
| TspRI | CASTG | 5 cut(s) | 610, 646, 661, 666, 983 |
| VpaK11BI | GGWCC | 2 cut(s) | 220, 1000 |
| XapI | RAATTY | 1 cut(s) | 938 |
| XbaI | TCTAGA | 1 cut(s) | 1222 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1501 |
| XmnI | GAANNNNTTC | 2 cut(s) | 538, 938 |
| XspI | CTAG | 3 cut(s) | 903, 1223, 1631 |