AT5G07940

BEST Arabidopsis thaliana protein match is dentin sialophosphoprotein-related (TAIR AT5G07980.1)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
2533581 .. 2540421
6841 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G07940.4

Sequence Viewer

Length: 4581 bp
ATGCCTGGAAACGAATTTGGGGAGAAGATCCACAATTTTTTTGGACAAGAAGGCCTATCCCAAGACCAGCAACATCAGTCTCAGGTTGTTGACAGAAGCTGGTCCAGTTTTAATAATGGTCTAGTCGGTAACCAGAGGCAGATTGACCCATCCCTCATTGCCAATCTGAAGAGTTATAACACACAACAATCTGTTGATCATGAGAGAGGTCATCAATCTTCAAATTCACAGCATGGTTTAAACTATACTCAGCAGCCTATAAGGTCCGAGTTCTCAAGAAGTTTATTGCAAGAACACCAGCAACTCCCAAATGGTTACATGCATGGGAACCTTGGGTTGCAGACAATGCCGAATGGGGCAAATGTTTTGGGAGGTGATGTAGAATCTAGTAGGGATAAGTTATCAGCAAGGGGATTTACTCCAGAACTTCATAATGTTCCTATGAGGCTTGAGATGGGAGAATCTCCGGTTAATTATGATTTCTTTGGTGGTCAACAACAATCAAACACACAGCTCTCTGGCATGCTCCAGCCTTTGCCAAGGCAGCAGATGACATTCAATGATATGCAACTACTGAAGCAGCAAGTTATGGTTAAGCAAATGCATGAATATCAAATGCAACAACAACTTCAAAAGCAACAGCTAGAGGCCAGGCAGCTCAATTCTTTGAATAGAAATGCAGTCAATGGAAGTTGCGCAAGTGATACCCAATCACGTATGATTAATGGCATCCCTCTTCAGAATGCGTCTAGTAACTGGTTTCAGCCAGATCTCATGACAGGAAATACAAACTGGATGCATCGCGGCATCTCACCAGCTGTTCAAGGTTCATCCAGTGGGCTCATGATTACCCCTGAGCATGGGCAGTCGAACTTAATGGCTCAACAGTTTGGACCTTCCTTGTACGGTATGCCTGTTAGTGGGACAAATGCACCTCAAAATGCTTTTTCTTCCGTTCAGATGAACAGATTAGCTGCACCGCATGGTTCTGCAAACAGGAGTTACTCTCTGACCAATCAGCCAACTTCATTTCTTAACCAAGGTGATGTTCAGGATAGTCAAATGCACCCTCGATCCACATACCAGGAGAAAGCGTTGTTCTCCCAGACATCAGTGCCAGATTCAAATAATAGGCCCAATTTTGAAAATTTCCAGCAAGATGATTCCCGTGAGAGGAACATTTCAGCGCAGGATAAATTTTGTCAGATGGAGGATTCTGGTCCAGCAGAAAAATCATTTATGAAAGTGCCTGAAAATATGAATGCATTGCAGAAGTCGTCAGCATTAGATCCTACTGAAGAAAAGATTTTGTTTGGTTCTGATGACAATTTGTGGGATGCATTTGGAAGCAGCACTGATATGAGCTTGCAAGGAAATCTTATGTCCAGTAATTCTGACCTATTCGATGCATGCCCCTCTTTGCAAAGTGGGAGTTGGAGTGCCCTTATGCAATCTGCTGTAGCAGAAACAACCAGCGATGACGCCGGTGTACATGGATGGGTTAACAGCAATACTGTCCCACATGCGAATTTGCACACTGATAGTAGAGCCCAGGATTTGGGTGCAAAGGCTTCAAATCCACTAAGTGAGAGATTCCACAGTGATTCCACTGGGGCAGCTGTTCAACATTTGCCTGACAAGGTAAATAAAGTTTCAGATCATGGCCTGTTTGAGAAGCCTATGGCTCAACTTAGTCAAATGGCTGGTAATATAATTCATTCTTCAAGTATTGATGAACAGAATAATTTGTGTTCTATTCGACAGAATGAGGGCATTGAAGATAGATTTGGTATTTGGAAGGCTGCTTCCAATCCAAATGTAGCTGCTCTGATTGAACAGAAGAATCATTTCACACAAAATCCACAAAGGGCAAGCTATGGATTTGGAATAGCCAGTGCAGGAAACGATTCTAGTGCTTCTCGGGATGTCCAGGGCAATATCCAACAGCATTTGGATAATAACTCTGTGGAGAAGGCTATCCCTCAACTGAAATCGAGAGACGGCAGTCAGATTCTTGAGTCATATGCGAGGAATAATGCTGGAACAAATGAAATGGTAAATGCCCGCGATTTTTCTATGTTGCCTGGTGGAAAAGAGACACAATCTGGTCATGTCGGTAGTAGGCCCTCGACAAGTCGCAAATTTCAGTATCATCCCATGGGTAATATTGATGTCACTAATGAATCTTGTCAAGAAAAAGTTTCTCATTTGCCAACCACATTGGAGCAGGTTCCTGTCGGAAACCAAGGGTATTTTGGGCAATCAAAGTTTCTTGGTCAGTCGGCTATGAACATGCCAATTGACAGGGGACATGTCTCACAAAACGACTTGAATTGCACAAATGAGGCTTTTAATGGCATGGGTTCAGAAAACTCACCTAGTACATCTGCTTCAGCTGACAGAAATGTTGATAGGTGTAATCAAGTGAAGAGCGCTTCGTCAAGACAAACTATGCTTGAGCTTCTTCACAAGGTGGACCAGTCACCAGATAATTCCTCGGAAACAAATGTTTCTGGGATTCCTGAAGCAAATGCCTCTGCTGAATATGGTGGTCAATTTCGGCATAATCAGTCATCTGCTTCTCAGGGGTTTAATCTACAGTTGGCACCTCCATCCCAGCTAGCTCCCTCACCTGATAACGTGCAGTTTTCTCGGAATTCTTTGCAGCCATTGAATTCATTTCATACTGGCCCTGAAAAAGGAGGAACAAGTCAGTCTAGGTTTGCTCCATGGGCATCTAATCAATCTTATCAGCAATCCACTCATCAAGGACCATTTCCTGGAATCTTAGGAGGATCCAACATGACCTCTGGTTTCCCTTATTCCAGAGGGTATCACCAAAATCAACAGATGGCTGTTGCTACCCGACAATCAGCTGCTAACAATTCAGTCGATTCATCTTCTGAGTTGTCTACCCCTCAAGTGAAAGAAAGAGATGAAAGTAGTGACTTTGATCAACGTATGCTGTCTGCTTCTCAGCCTCTGGTGGCATCCAGCTCGCCTCAGCAGAGTTCCTCTTCTGGTATGATGTCTGACTCACCATCCGGTATTTCAGCTCCGCAACATCAGTTTTGGAACCAGCCATCTAAGCCTCAGCCAGTTATTTTACGCCCGCATCCATTGCCCAGCAACAACATGGCAGCTAGCTTCTCAAGGCAGGAGAAGACAAACCAATTGTCCTCCCAAAATGGTGACATGTCATTAAGTGGGAGGGACATGGTGAATATGCATGGGTTACAGAGTAAAGATATGGGTGCAAAACGAACATCTAATGTTGCTTCAATGTTCTCCAAAATGGTGCAGAGCAATCATCAATCCTTTGATCGCTCTCTTCCTTCAAACAACGTTCCAAAGGATAGCTTACATCACGAGGAACAAATGGTTGGAAGTGGGGAGGGCGATACATCCAAGGTGACTGTTGAAAATGGTGATTTTGATCCTCAAGAGGTAGCTCACAAAGGGGAACAACAATCACCTTCAAGATCTGATGGTTTAGTTAGAGGTGGGTTAAATAACAAGGAGTCAGCGAATCACTTGCCGCATTTAGGCCATACTGTTTCTCAGAGTTTCTCCTCTAAAAATCATGCAGCCTCGGTTAGAGCAGATCATCAACAAATTAGTCCTCAGATGGCTCCATCCTGGTATAGTCAATATGGAACTTTCAAGAATGGACTGGTGCAGCCCATGAATGATACAGGGAGATTTACCCCCTTGAAAATAGGAGAACAATCGTCTAATGTTGAGAGTTCGGTTGATGGTACACATACTGTTCAATCATGCAAGCAGTGTCTTATGGAGCAAATGTCGGGCTCCGCACCAGGAGTTGAGACTCCCTCATCCGATTCATTGCTTCATGGTGCTACTGACAAGCTTCTGAAGGTTGATAAACCGAAGAAGCGCAAAACTGCCACATCAGAACTTCAATCTTGGAATAAAGAAGTCATGCAGGATTCCCAAAGGCTCAAGACGCTCAGCGAGGCCGAGATTAACTGGGCCAGGGAAACTAATCGATTTGCTGAAAAAGTGGAATTTGAGACTTTACTTGAGGATAGCCCACCAATTAGATCAAAGAGAAGGCTTATACATACAACACAACTCATGCAACAACTATTTAGCCCACCTCCGGCTAGGGTGATATCTTTGGTTGCTAGCTCAAATTATGATGTTGTTGCATATACTGCTGGAAGAGCTGCACTAGGAGATGCATGTAGCTCCAGTAGTACCGACAGGAGTGAGGGCTTTTCGCCCCCAAACAACTCAAACCCGTTGTCTGAGAGAACGGAAAATGAAAAAATCAGTGACCAGTACATCTCCAAAGCTGCTGAAGATTTCATTAGTAGAACACGGAAACTGGAGACTGACTTTGCAGGGCTAGAAAATGGAACTACAATTCCAGACTTGAGAGTCGAAGTCCAGGATCTAGAGAAGTTTGCAGTGATCAATCGTTTTGCGAAGTTCCACCCGCCATCTTCATCTATGAACCGGACCGTGAATTCACTTAAGTTAAACCTACAAAGATATGTTACCATAGCTCCAATGCCTCAGAATATTCCAGACAGGGTACAATGTCTCTCTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1526

Amino Acids

167.42

Weight (kDa)

5.96

Isoelectric Point (pI)

58.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 177
AasI GACNNNNNNGTC 1 cut(s) 4403
Acc16I TGCGCA 1 cut(s) 697
Acc36I ACCTGC 1 cut(s) 2218
AccB1I GGYRCC 1 cut(s) 2605
AccB7I CCANNNNNTGG 2 cut(s) 1558, 2780
AccI GTMKAC 1 cut(s) 2912
AccII CGCG 2 cut(s) 804, 2067
AciI CCGC 8 cut(s) 804, 980, 2065, 3059, 3113, 3539, 3813, 4463
AclI AACGTT 1 cut(s) 3345
AclWI GGATC 7 cut(s) 22, 1068, 1283, 2790, 2803, 3431, 4425
AcuI CTGAAG 8 cut(s) 188, 596, 722, 1317, 2376, 2544, 3896, 4344
AcyI GRCGYC 1 cut(s) 1482
AdeI CACNNNGTG 2 cut(s) 1586, 2473
AfaI GTAC 7 cut(s) 905, 1491, 2383, 3760, 4222, 4307, 4563
AfeI AGCGCT 1 cut(s) 2434
AfiI CCNNNNNNNGG 8 cut(s) 860, 920, 1173, 1558, 2699, 2780, 3545, 4123
AflII CTTAAG 1 cut(s) 4499
AflIII ACRYGT 2 cut(s) 2311, 3195
AjuI GAANNNNNNNTTGG 6 cut(s) 1032, 1064, 1770, 1802, 3366, 3398
AloI GAACNNNNNNTCC 2 cut(s) 4375, 4407
Alw26I GTCTC 8 cut(s) 84, 1992, 2090, 2320, 3821, 4028, 4349, 4574
AlwI GGATC 7 cut(s) 22, 1068, 1283, 2790, 2803, 3431, 4425
AlwNI CAGNNNCTG 2 cut(s) 99, 2983
Ama87I CYCGRG 1 cut(s) 1920
Aor51HI AGCGCT 1 cut(s) 2434
AoxI GGCC 9 cut(s) 52, 648, 1133, 1663, 2123, 2689, 3547, 3978, 3993
ArsI GACNNNNNNTTYG 4 cut(s) 3161, 3193, 4253, 4285
AseI ATTAAT 1 cut(s) 723
Asp700I GAANNNNTTC 2 cut(s) 1847, 1906
AspLEI GCGC 4 cut(s) 698, 1189, 2435, 3900
AsuNHI GCTAGC 3 cut(s) 2620, 3143, 4148
AvaI CYCGRG 1 cut(s) 1920
AvaII GGWCC 7 cut(s) 102, 264, 893, 1220, 2476, 2771, 4485
BaeGI GKGCMC 1 cut(s) 1444
BamHI GGATCC 1 cut(s) 2795
BanI GGYRCC 1 cut(s) 2605
BanII GRGCYC 3 cut(s) 843, 1552, 3812
BarI GAAGNNNNNNTAC 2 cut(s) 2374, 2406
BauI CACGAG 1 cut(s) 3368
BbsI GAAGAC 1 cut(s) 3170
BbvCI CCTCAGC 2 cut(s) 3003, 3093
BceAI ACGGC 1 cut(s) 2017
BcgI CGANNNNNNTGC 8 cut(s) 1895, 1929, 2633, 2667, 2979, 3013, 3517, 3551
BclI TGATCA 3 cut(s) 196, 2953, 4437
BcoDI GTCTC 8 cut(s) 84, 1992, 2090, 2320, 3821, 4028, 4349, 4574
BfmI CTRYAG 2 cut(s) 1458, 2597
BfoI RGCGCY 1 cut(s) 2436
BfrI CTTAAG 1 cut(s) 4499
BfuAI ACCTGC 1 cut(s) 2218
BglII AGATCT 2 cut(s) 769, 3482
BlpI GCTNAGC 1 cut(s) 3971
Bme18I GGWCC 7 cut(s) 102, 264, 893, 1220, 2476, 2771, 4485
BmeT110I CYCGRG 1 cut(s) 1920
BmiI GGNNCC 7 cut(s) 329, 2232, 2607, 2797, 3077, 3633, 3811
BmrI ACTGGG 2 cut(s) 1620, 4000
BmtI GCTAGC 3 cut(s) 2624, 3147, 4152
BmuI ACTGGG 2 cut(s) 1620, 4000
BoxI GACNNNNGTC 1 cut(s) 2004
BpiI GAAGAC 1 cut(s) 3170
BplI GAGNNNNNCTC 4 cut(s) 991, 1023, 3818, 3850
BpmI CTGGAG 4 cut(s) 405, 512, 4198, 4373
Bpu10I CCTNAGC 3 cut(s) 855, 3003, 3093
Bpu1102I GCTNAGC 1 cut(s) 3971
Bsa29I ATCGAT 1 cut(s) 4009
BsaAI YACGTR 1 cut(s) 716
BsaBI GATNNNNATC 1 cut(s) 3435
BsaHI GRCGYC 1 cut(s) 1482
BsaWI WCCGGW 3 cut(s) 466, 3044, 4482
Bsc4I CCNNNNNNNGG 8 cut(s) 860, 920, 1173, 1558, 2699, 2780, 3545, 4123
Bse118I RCCGGY 1 cut(s) 1484
Bse3DI GCAATG 4 cut(s) 156, 1265, 3119, 3845
Bse8I GATNNNNATC 1 cut(s) 3435
BseCI ATCGAT 1 cut(s) 4009
BseJI GATNNNNATC 1 cut(s) 3435
BseLI CCNNNNNNNGG 8 cut(s) 860, 920, 1173, 1558, 2699, 2780, 3545, 4123
BseMI GCAATG 4 cut(s) 156, 1265, 3119, 3845
BseRI GAGGAG 1 cut(s) 3562
BseSI GKGCMC 1 cut(s) 1444
BseYI CCCAGC 2 cut(s) 2616, 3125
BsgI GTGCAG 6 cut(s) 960, 1917, 2663, 3320, 3698, 4176
Bsh1236I CGCG 2 cut(s) 804, 2067
BshFI GGCC 9 cut(s) 54, 650, 1135, 1665, 2125, 2691, 3549, 3980, 3995
BshNI GGYRCC 1 cut(s) 2605
BshVI ATCGAT 1 cut(s) 4009
BsiHKCI CYCGRG 1 cut(s) 1920
BsiSI CCGG 5 cut(s) 467, 1485, 3045, 4124, 4483
BslFI GGGAC 4 cut(s) 937, 1502, 2322, 3227
BslI CCNNNNNNNGG 8 cut(s) 860, 920, 1173, 1558, 2699, 2780, 3545, 4123
BsmAI GTCTC 8 cut(s) 84, 1992, 2090, 2320, 3821, 4028, 4349, 4574
BsmBI CGTCTC 1 cut(s) 1992
BsmFI GGGAC 4 cut(s) 937, 1502, 2322, 3227
BsmI GAATGC 2 cut(s) 748, 1267
BsnI GGCC 9 cut(s) 54, 650, 1135, 1665, 2125, 2691, 3549, 3980, 3995
BsoBI CYCGRG 1 cut(s) 1920
Bsp1286I GDGCHC 4 cut(s) 843, 1444, 1552, 3812
Bsp1407I TGTACA 1 cut(s) 1489
Bsp1720I GCTNAGC 1 cut(s) 3971
Bsp19I CCATGG 2 cut(s) 2157, 2729
BspACI CCGC 8 cut(s) 804, 980, 2065, 3059, 3113, 3539, 3813, 4463
BspANI GGCC 9 cut(s) 54, 650, 1135, 1665, 2125, 2691, 3549, 3980, 3995
BspDI ATCGAT 1 cut(s) 4009
BspFNI CGCG 2 cut(s) 804, 2067
BspHI TCATGA 3 cut(s) 199, 774, 843
BspLI GGNNCC 7 cut(s) 329, 2232, 2607, 2797, 3077, 3633, 3811
BspMI ACCTGC 1 cut(s) 2218
BspOI GCTAGC 3 cut(s) 2624, 3147, 4152
BspPI GGATC 7 cut(s) 22, 1068, 1283, 2790, 2803, 3431, 4425
BspQI GCTCTTC 2 cut(s) 2423, 4180
BspT107I GGYRCC 1 cut(s) 2605
BspTI CTTAAG 1 cut(s) 4499
BsrDI GCAATG 4 cut(s) 156, 1265, 3119, 3845
BsrFI RCCGGY 1 cut(s) 1484
BsrGI TGTACA 1 cut(s) 1489
BssAI RCCGGY 1 cut(s) 1484
BssNI GRCGYC 1 cut(s) 1482
BssSI CACGAG 1 cut(s) 3368
BssT1I CCWWGG 7 cut(s) 331, 539, 1039, 2157, 2245, 2729, 3408
Bst2BI CACGAG 1 cut(s) 3368
Bst4CI ACNGT 9 cut(s) 888, 908, 1516, 1601, 2601, 3418, 3556, 3769, 4489
Bst6I CTCTTC 6 cut(s) 164, 741, 2423, 3022, 3336, 4180
BstACI GRCGYC 1 cut(s) 1482
BstAFI CTTAAG 1 cut(s) 4499
BstAPI GCANNNNNTGC 3 cut(s) 346, 3121, 4178
BstAUI TGTACA 1 cut(s) 1489
BstBAI YACGTR 1 cut(s) 716
BstDSI CCRYGG 2 cut(s) 2157, 2729
BstEII GGTNACC 1 cut(s) 128
BstENI CCTNNNNNAGG 1 cut(s) 2697
BstFNI CGCG 2 cut(s) 804, 2067
BstH2I RGCGCY 1 cut(s) 2436
BstHHI GCGC 4 cut(s) 698, 1189, 2435, 3900
BstMAI GTCTC 8 cut(s) 84, 1992, 2090, 2320, 3821, 4028, 4349, 4574
BstMWI GCNNNNNNNGC 8 cut(s) 346, 544, 2732, 3088, 3121, 3967, 4178, 4187
BstNSI RCATGY 8 cut(s) 322, 526, 1413, 1526, 2296, 2315, 3199, 4209
BstPAI GACNNNNGTC 1 cut(s) 2004
BstPI GGTNACC 1 cut(s) 128
BstSFI CTRYAG 2 cut(s) 1458, 2597
BstSLI GKGCMC 1 cut(s) 1444
BstUI CGCG 2 cut(s) 804, 2067
BstV2I GAAGAC 1 cut(s) 3170
BstX2I RGATCY 6 cut(s) 27, 769, 1288, 2795, 3482, 4417
BstYI RGATCY 6 cut(s) 27, 769, 1288, 2795, 3482, 4417
Bsu15I ATCGAT 1 cut(s) 4009
BsuRI GGCC 9 cut(s) 54, 650, 1135, 1665, 2125, 2691, 3549, 3980, 3995
BsuTUI ATCGAT 1 cut(s) 4009
BtgI CCRYGG 2 cut(s) 2157, 2729
BtgZI GCGATG 2 cut(s) 785, 1491
BtsI GCAGTG 2 cut(s) 3791, 4440
BveI ACCTGC 1 cut(s) 2218
CaiI CAGNNNCTG 2 cut(s) 99, 2983
CciI TCATGA 3 cut(s) 199, 774, 843
CfoI GCGC 4 cut(s) 698, 1189, 2435, 3900
Cfr10I RCCGGY 1 cut(s) 1484
ClaI ATCGAT 1 cut(s) 4009
CpoI CGGWCCG 1 cut(s) 4485
CseI GACGC 3 cut(s) 735, 1490, 3976
Csp6I GTAC 7 cut(s) 904, 1490, 2382, 3759, 4221, 4306, 4562
CspI CGGWCCG 1 cut(s) 4485
CviQI GTAC 7 cut(s) 904, 1490, 2382, 3759, 4221, 4306, 4562
DraI TTTAAA 1 cut(s) 240
DraIII CACNNNGTG 2 cut(s) 1586, 2473
DrdI GACNNNNNNGTC 1 cut(s) 4403
DseDI GACNNNNNNGTC 1 cut(s) 4403
Eam1104I CTCTTC 6 cut(s) 164, 741, 2423, 3022, 3336, 4180
EarI CTCTTC 6 cut(s) 164, 741, 2423, 3022, 3336, 4180
Eco130I CCWWGG 7 cut(s) 331, 539, 1039, 2157, 2245, 2729, 3408
Eco147I AGGCCT 1 cut(s) 54
Eco24I GRGCYC 3 cut(s) 843, 1552, 3812
Eco32I GATATC 1 cut(s) 4137
Eco47I GGWCC 7 cut(s) 102, 264, 893, 1220, 2476, 2771, 4485
Eco47III AGCGCT 1 cut(s) 2434
Eco57I CTGAAG 8 cut(s) 188, 596, 722, 1317, 2376, 2544, 3896, 4344
Eco88I CYCGRG 1 cut(s) 1920
Eco91I GGTNACC 1 cut(s) 128
EcoNI CCTNNNNNAGG 1 cut(s) 2697
EcoO109I RGGNCCY 1 cut(s) 2124
EcoO65I GGTNACC 1 cut(s) 128
EcoRI GAATTC 3 cut(s) 2656, 2674, 4492
EcoRV GATATC 1 cut(s) 4137
EcoT14I CCWWGG 7 cut(s) 331, 539, 1039, 2157, 2245, 2729, 3408
EcoT22I ATGCAT 8 cut(s) 324, 606, 801, 1267, 1342, 1411, 3231, 4207
EcoT38I GRGCYC 3 cut(s) 843, 1552, 3812
ErhI CCWWGG 7 cut(s) 331, 539, 1039, 2157, 2245, 2729, 3408
Esp3I CGTCTC 1 cut(s) 1992
FalI AAGNNNNNCTT 4 cut(s) 1362, 1394, 3344, 3376
FaqI GGGAC 4 cut(s) 937, 1502, 2322, 3227
FauI CCCGC 3 cut(s) 2072, 3120, 4470
FauNDI CATATG 1 cut(s) 2023
FbaI TGATCA 3 cut(s) 196, 2953, 4437
FblI GTMKAC 1 cut(s) 2912
FriOI GRGCYC 3 cut(s) 843, 1552, 3812
FspI TGCGCA 1 cut(s) 697
GlaI GCGC 4 cut(s) 697, 1188, 2434, 3899
GsaI CCCAGC 2 cut(s) 2620, 3129
GsuI CTGGAG 4 cut(s) 405, 512, 4198, 4373
HaeII RGCGCY 1 cut(s) 2436
HaeIII GGCC 9 cut(s) 54, 650, 1135, 1665, 2125, 2691, 3549, 3980, 3995
HapII CCGG 5 cut(s) 467, 1485, 3045, 4124, 4483
HgaI GACGC 3 cut(s) 735, 1490, 3976
HhaI GCGC 4 cut(s) 698, 1189, 2435, 3900
Hin1I GRCGYC 1 cut(s) 1482
Hin6I GCGC 4 cut(s) 696, 1187, 2433, 3898
HinP1I GCGC 4 cut(s) 696, 1187, 2433, 3898
HincII GTYRAC 3 cut(s) 91, 494, 1504
HindII GTYRAC 3 cut(s) 91, 494, 1504
HindIII AAGCTT 1 cut(s) 3869
HpaI GTTAAC 1 cut(s) 1504
HpaII CCGG 5 cut(s) 467, 1485, 3045, 4124, 4483
Hpy166II GTNNAC 7 cut(s) 91, 494, 1490, 1504, 2476, 2913, 3761
Hpy8I GTNNAC 7 cut(s) 91, 494, 1490, 1504, 2476, 2913, 3761
HpyAV CCTTC 8 cut(s) 44, 906, 1792, 1966, 3345, 3486, 3871, 4068
HpyCH4III ACNGT 9 cut(s) 888, 908, 1516, 1601, 2601, 3418, 3556, 3769, 4489
HpyCH4IV ACGT 4 cut(s) 715, 2640, 2959, 3345
HpyF10VI GCNNNNNNNGC 8 cut(s) 346, 544, 2732, 3088, 3121, 3967, 4178, 4187
HpySE526I ACGT 4 cut(s) 715, 2640, 2959, 3345
Hsp92I GRCGYC 1 cut(s) 1482
HspAI GCGC 4 cut(s) 696, 1187, 2433, 3898
Ksp22I TGATCA 3 cut(s) 196, 2953, 4437
KspAI GTTAAC 1 cut(s) 1504
LguI GCTCTTC 2 cut(s) 2423, 4180
MaeII ACGT 4 cut(s) 715, 2640, 2959, 3345
MfeI CAATTG 2 cut(s) 2298, 3173
MflI RGATCY 6 cut(s) 27, 769, 1288, 2795, 3482, 4417
MhlI GDGCHC 4 cut(s) 843, 1444, 1552, 3812
MlyI GAGTC 5 cut(s) 2027, 3029, 3530, 3823, 4413
MmeI TCCRAC 5 cut(s) 1415, 1966, 2218, 2823, 3364
Mph1103I ATGCAT 8 cut(s) 324, 606, 801, 1267, 1342, 1411, 3231, 4207
MroXI GAANNNNTTC 2 cut(s) 1847, 1906
MslI CAYNNNNRTG 1 cut(s) 1358
MspA1I CMGCKG 4 cut(s) 818, 1619, 2396, 2876
MspCI CTTAAG 1 cut(s) 4499
MspI CCGG 5 cut(s) 467, 1485, 3045, 4124, 4483
MssI GTTTAAAC 1 cut(s) 240
MunI CAATTG 2 cut(s) 2298, 3173
Mva1269I GAATGC 2 cut(s) 748, 1267
MvnI CGCG 2 cut(s) 804, 2067
MwoI GCNNNNNNNGC 8 cut(s) 346, 544, 2732, 3088, 3121, 3967, 4178, 4187
NcoI CCATGG 2 cut(s) 2157, 2729
NdeI CATATG 1 cut(s) 2023
NheI GCTAGC 3 cut(s) 2620, 3143, 4148
NlaIV GGNNCC 7 cut(s) 329, 2232, 2607, 2797, 3077, 3633, 3811
NmeAIII GCCGAG 1 cut(s) 4006
NmuCI GTSAC 6 cut(s) 2173, 2481, 2945, 3191, 3412, 4298
NsbI TGCGCA 1 cut(s) 697
NsiI ATGCAT 8 cut(s) 324, 606, 801, 1267, 1342, 1411, 3231, 4207
NspI RCATGY 8 cut(s) 322, 526, 1413, 1526, 2296, 2315, 3199, 4209
PaeI GCATGC 2 cut(s) 526, 1413
PagI TCATGA 3 cut(s) 199, 774, 843
PceI AGGCCT 1 cut(s) 54
PciI ACATGT 2 cut(s) 2311, 3195
PciSI GCTCTTC 2 cut(s) 2423, 4180
PctI GAATGC 2 cut(s) 748, 1267
PdmI GAANNNNTTC 2 cut(s) 1847, 1906
PflMI CCANNNNNTGG 2 cut(s) 1558, 2780
PfoI TCCNGGA 2 cut(s) 2779, 4413
PleI GAGTC 5 cut(s) 2026, 3029, 3529, 3823, 4412
PmeI GTTTAAAC 1 cut(s) 240
PpsI GAGTC 5 cut(s) 2026, 3029, 3529, 3823, 4412
Ppu21I YACGTR 1 cut(s) 716
PscI ACATGT 2 cut(s) 2311, 3195
PshAI GACNNNNGTC 1 cut(s) 2004
PshBI ATTAAT 1 cut(s) 723
PsiI TTATAA 1 cut(s) 177
Psp1406I AACGTT 1 cut(s) 3345
PspEI GGTNACC 1 cut(s) 128
PspFI CCCAGC 2 cut(s) 2616, 3125
PspN4I GGNNCC 7 cut(s) 329, 2232, 2607, 2797, 3077, 3633, 3811
PstNI CAGNNNCTG 2 cut(s) 99, 2983
PsuI RGATCY 6 cut(s) 27, 769, 1288, 2795, 3482, 4417
PvuII CAGCTG 4 cut(s) 818, 1619, 2396, 2876
RsaI GTAC 7 cut(s) 905, 1491, 2383, 3760, 4222, 4307, 4563
RsaNI GTAC 7 cut(s) 904, 1490, 2382, 3759, 4221, 4306, 4562
RseI CAYNNNNRTG 1 cut(s) 1358
Rsr2I CGGWCCG 1 cut(s) 4485
RsrII CGGWCCG 1 cut(s) 4485
SapI GCTCTTC 2 cut(s) 2423, 4180
SchI GAGTC 5 cut(s) 2027, 3029, 3530, 3823, 4413
SduI GDGCHC 4 cut(s) 843, 1444, 1552, 3812
SfcI CTRYAG 2 cut(s) 1458, 2597
SgrAI CRCCGGYG 1 cut(s) 1484
SinI GGWCC 7 cut(s) 102, 264, 893, 1220, 2476, 2771, 4485
SmiMI CAYNNNNRTG 1 cut(s) 1358
SphI GCATGC 2 cut(s) 526, 1413
SseBI AGGCCT 1 cut(s) 54
SsiI CCGC 8 cut(s) 804, 980, 2065, 3059, 3113, 3539, 3813, 4463
SspI AATATT 2 cut(s) 2167, 4549
StuI AGGCCT 1 cut(s) 54
StyI CCWWGG 7 cut(s) 331, 539, 1039, 2157, 2245, 2729, 3408
TaaI ACNGT 9 cut(s) 888, 908, 1516, 1601, 2601, 3418, 3556, 3769, 4489
TaiI ACGT 4 cut(s) 718, 2643, 2962, 3348
TaqI TCGA 9 cut(s) 869, 1072, 1404, 1759, 1994, 2129, 2892, 4009, 4407
TatI WGTACW 3 cut(s) 1489, 2381, 4305
TauI GCSGC 2 cut(s) 807, 3541
TseFI GTSAC 6 cut(s) 2173, 2481, 2945, 3191, 3412, 4298
Tsp45I GTSAC 6 cut(s) 2173, 2481, 2945, 3191, 3412, 4298
TspGWI ACGGA 3 cut(s) 943, 4295, 4360
Van91I CCANNNNNTGG 2 cut(s) 1558, 2780
Vha464I CTTAAG 1 cut(s) 4499
VpaK11BI GGWCC 7 cut(s) 102, 264, 893, 1220, 2476, 2771, 4485
VspI ATTAAT 1 cut(s) 723
XagI CCTNNNNNAGG 1 cut(s) 2697
XbaI TCTAGA 1 cut(s) 4420
XceI RCATGY 8 cut(s) 322, 526, 1413, 1526, 2296, 2315, 3199, 4209
XcmI CCANNNNNNNNNTGG 3 cut(s) 38, 2252, 3133
XmiI GTMKAC 1 cut(s) 2912
XmnI GAANNNNTTC 2 cut(s) 1847, 1906
Zsp2I ATGCAT 8 cut(s) 324, 606, 801, 1267, 1342, 1411, 3231, 4207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.