Rh7AG054000

isoform X1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
3717387 .. 3727476
10090 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG054000.1

Sequence Viewer

Length: 5541 bp
ATGCCTGGAAACGAAGTTGGAGACAGGGTCCACAATTTCTTTGGCCAAGAGAACTTGTCACAGGGTCAGCGTCATCCGCAGGCCACTGACGGGAACTGGCCTGGTCTAAGTAACAATTTGTGGGTTGGGAACCAGAGACAAGTTGGATCTCCTGTTAACTCAAGTTTAAAGAGTTACAATATACAACCAGATTCTGAGAGAGGGCATGGGAGTCCGTCTTTGCATGTGCCTCATGGTTTGAATTTTATGCAATCAAATTTGAGGCCGGAGTTTGGCAGAGTTCAGTATCAAAGTCAGCAGCCAACTGCAAATGGCTATATGCATGGGCATCAGATGTTCCAGACAAGGCAGAATGAAGCTAACTTTTTGGGAGTGGATACAGAGTCTGATAAGCAAAATTTAACATCTAGAGGCTTGTCTACACCTGAATCACGAGGAAGTGGTCCTGAACATGCTAAAAAGAATTCGGCGAGATTGGAAACTTCAGAATCTCCTGTTGGTTTTGATTTTTTTGGTGGTCAACAGCAAATGAGTGGTCAGCATCTCAGCATGATGCAGTCTTCACCAAGGCAGCAGCAACCACGTATTAGTGACATGCAGCTACAAAGACAGGCAATGTTCACACAAATGCAAGAATTTCAAAGGCAGCAACAACTAGAAAGGCAACAGCTGGTTTTGGCAAATCAAGCTTCCTCCATTGCAAAAGCTGCTGGTAACCACACACCAACCCAGATGAATGGCGTCACAATCAACGAGGCATCCAACAATCAATGGCCACCTAATGTTGTGGCAGGCAACACAAACTGGCTGCAGCGTGGAGCTTCCCCTGTTATGCAGGGGGGATCTAGTGGACATGTATTGTCCCATGAACAAGCCCAGGCACTGCGCTTGATGGGCATTGTCCCTCAACAGGCTGATCAATCTCTATATGGTGTTCCAATTTCTAGCTCAAGTGGAACACCAGGTTCATATCCTCATTTTCAAATGGATAAACCGGCAATGCAGCAGATATCGGTCGGTCGTAATTCATTTCCAGGTGATCAGTATACTGCATTTTCAGGTCCAGTTAGCATGCAAGAGGGATCTCTGGCTTCTAGACAGGATTTTCAAGGGAAAAGTATGGTTGGGCCTTCTGCTGCTCAAAGTTTGAGCAGTGGGTTCAATTTGGAAACATTGCATCGAGTAAATCCCCAACAAAGAAATGAACCCATGGAGGAATTCCAAGGGAGGCAAGAGCTAGTTGGATTGTTAGAACCATCACCGGAGAAAGCAGTTGGGCAGGTTGCACCCTCACAGGCTGTGGCTACCCTAGATCCAACTGAAGAAAAGATTTTGTTTGGTTCAGATGATAATCTTTGGGATGCTTTTGGGAGGAGCGCCAATGTGGGAATGGGAGGTTCTAGTATGCTGGATGGTGCAGATATTTTTGGTGGACTTTCTTCTGTACAAAGTGGAACTTGGAGTGCTCTTATGCAGTCTGCTGTTGCAGAAACTTCTAGTGTTGATGGAGGGATACAGGAAGAGTGGTGTGGTCCTAGTTTTCGAAATCCAGAACCTCCAGTTGGGACTCAGCAGCCCTCAAGTGTCAGTGATACTAACAAACAACAATCTGGTTGGGCTGGTAACAACTTGCATTCATCGTCTGACTTGAATTCTAGACCCTCCTCACAATTTGCTGATGCCAATAGGCCCAGTATCAGTGGTAGTTTTTCTAGTATTCAGGGATTTCAGCAATCAGGATCTAAAACTTTGCATGAAAGAGGAGACGTTTTTCAGACTGATTCTTCTCACAGGTTTATTTCACAGAGTCCTGAACAAGGAAGTAAATGGTTGGATCACAACCCTCCACCACAGCCACCTGCAGACGGTAGTCATAACAACTATGGAACCATTAGTCATTCGTCAGGTAGAGAGATAAATGCAAATAGCATTTCAGGTTCTTGGAACCGTCAAGAAAGAAGTTCTTCGCATAGTAATGATAACCAGCCAAACAATATGTCAAATGGGTGGAATTTTACTGAATCTGTGTCAACAGATGGGGGTAATAATCTGAAAAATCATGGGAATCAAATCTTATCACGATCTGCTGAAGGTGGTGATCTGAAGAGAGGCATGCATGAGGAAATAAGCCGTGCTGCTGGTATGTGGAAGACGGATTTTGCTCCAAACTCAAATTTTGAAGTGGCACATCCAAAATATGCAAGCCCGCAAATCAGTAGAGAGGGTTCAAGTATAAACAACGCTCCTAAATCAAATTCCAGCGCTGAAAGAGCCTACCAAGAAGGCCAGCAACATCTTGCAAACAGTCACGATTTCTGGACACCTGTTGATTCTTTAGTGAACTCTAAAGGAGGAGAGGCTCTGGGAAAAAATCAGCATCATCTGGACAAGAACCACCTGATTTTGGAGTCATCCGGGAACAATTGCTTAGACAAAGGAGTAGTTGAAATGCATGATATGGAGAACAACAATACAAAAGAGAATTACCATAATGCATATCACCATGCTTCCACTGCGGGTATGAAGGAAAATGTCGTCTCAGATGCTGGCGATTCACGTACTTTACCTGGAAGCAAACAACACTCATCTGGCAATGCTGGTCGCAAGCCCTCTGCAACTCGCAAGTTTCAGTATCATCCAATGGGGGATGTTGGTGTTAAAGTGGAACCTTCATCTGGAAGAAAACACGTGACACATTCACAGGCTATGACCCAGCAGGTCTCTCGAGGATTCAAAAGTCATGAACAAGGGAGTTTTGGGCAGTCAAAATTTATGGGTCACACTGATAGAAGTTCTATGGAAATTGAAAAGGTTAACATAAGAGGTTCGGATGAGCCACCTTCAAAAAGCATGCTTCCAGGTTATGCGCCAAGTACGTCTACTCCCTTTGACAGGTCTACTGGTAATAATAACAACACCTCAAAAAAGGCTGCACCACCATCAAGTCAACATATGCTTGAGCTTCTTCACAAGGTGGACCAACCAAGGGAGCATGGTAATGCTACTCACTTCAGCCCTTCTGATCACAACACGTCATCTGAGATGCCTGAAGTGGAAACTTCTGATGGATCTGTAGGTCACATTCAGAGAAATCAATCATCTGTCTCTCAAGGTTTTGGTTTACAGCTGGCTCCTCCATCTCAACGGATTCCACTTGCAGACCATGCCCTGTCTTCTCAGAGTTCCTCACAAGCAGTTCTGGGTTCAGGTCGTGTCCATTCTGAGATGGGAGAAAAAGGTCGTACATGGTTGGCCTCAACAGCATCTGTTCAGTCCTTGCCATCCTCTCACGAAGCATCTCAAGGGGAATTAAGAAATAGTCTCCCTGGTAGCTCAGGGCAAACAGGGAATAAGGCCCTGGCCCCACAATACCATATTCATGGAGGTTTATCTGCATCTTCCGAATATGGTTTTCCTCATTCAAGAAGTCAACGAGAAAATCAGCACATGACTGCTGCAAGTGGCCAAGTAACTGCAAGCCAGTCTGTTAATATACCTTTTGATAGGCTTGCATTTCGTCCGCAACAGTTGGGTGAATCTTTTGAGAGAGCTCAAACTAGTCAATCTCCTCTGACAGATAAGTCTGAAAGTGCTTCACAGGATAACCTTACTTCTGCAGAGGCATCACTCGTGAATATTGCCGACCAGTCCCGTTCAAGAGTCGCTGCCCCAAAAATCCCAGAATCAGATGCTGAGCCTTCTGTTACGTCTGGTATGTCCCATCAAGGTGCAGCTCCTAAAGTCTTGACCAATGTGTGGACCAGCGTTCCACTTCAGCAACCTCTAGTAAGTGCTGAACCTTCCAAGGCTTCATCTCAGTTGTTTAAATCCCAGCTTCAAACAACTAATCATTTGGTAAAAACTTTCCATGGTTCACCAAAGCTCAATGAGCAAGATACCCGGGAAAGAGGGAATGGCTTCTCTGCATTTGGTGTATATAGTTCAAACTTGCAAAGCTCTGGTCCAAAAGAGCAGCCATCCAAACAAAACACCAGGCAACAAGTATCACCGGAGAACATTCAGACTGCCCAAAAGACGAATGTATCACAAGGAAAAGAATCCACTGCAAATAATTATATTGAGGCATCTGCTTCAAACTCTGCTGCTACCCAGAGAGATATTGAAGCTTTCGGCCGTTCTTTAAAGCCAAATATCAGTTCCCATCAAAGTTATTCCCTGCTGAACCAAGTACAGGTTATGAAAAGTACAGAGATTGATGGAAGTGATCATAGTGTGAAGAGATTGAGAGGTCCAGATTCTGGTGCAGAGACTCAGCAGGTGAGTCCCCAGGGAGGACCGCAATTATCTTATGGATATAATAATATGTTAAGGGATTCATCAGCTGATCATACCCCAGTACCTTCCGGAGATTCTAAAATGCTGAGCTTTGCATCCAAACTTGGGGATACCCGACTTTCAAATGCATCTGGTCAGGATATGTATGCATTTAGTCGGAAGAATTCTCAGAATTTCTCTAGTGGTAGTAATGCATCTTCTCTTAGAGGTGAACAGTCTCAAGTTAGTCCGCAAATGGCGCCATCCTGGTTTGACCAATATGGAACCTTTAAAAATGGGCAAATATTGCCAATGCATGATACACTTAGAGCCACTTTGAAGTCTATGGAACAACCTTCCATTGCTGGAAAGCCAGGTGATCTGCATGCTCGTGAACAGATGGAGGAACCCATTGCTACTTCTGATGCTAGTACTATTCCACAGAGTCCAGCTCTGAAACCTATTTCCAATGAGCAACTAACATCCCCTCATTTACTGCGTCCTGATGCAACTGATGAAAGTTTAACTGTTGAGAGACCAAAGAAGCGTAAAAGTGCTACATCTGAACTTTCACCTTGGCATAAAGAGCTGACCAAGGTTTCCCAAAGGCTTCTAAATATGAGAGCGGCAGATGTAGAGTGGGCTCGAGCAACGAACCGACTGGCGGAGAAGGTGGAAGATGAAAGTGAAATGATTGAAGATAGACCACCGATGTTTAGGTCCAAAAAGAGGCTTATCTTGACAACACAGCTTGTGCAACAATTGCTTCGGCCTCCTCCTTCAGCAGTTCTCTCTGCAGATGCAAGCTCTTCCTTTGAGATTGTAGCTTATTTTGCTTCTAGACTATCACTAGGTGATGCCTGCAGTGCAATCCCCTGCTCTAGAAATGATATTCAAACCCCATCTCCTCCTGACCGTGCAAACCATTTGCCTGAGAAGCTTAAAACACCTGAGAGAGTTCATCGGTACTTCCCAAAAGTTGTGGAAGACTTTGTTGAAAAAGCAAGGAAGCTGGAAAATGATCTGTTGAGACTGGACAAGAGAACCTCCATCTTAGACTTGAGAGTGGACAGCCAGGATCTGGAGAAGTTTTCTGTCATCAATCGTTTTGCTAAGTTCCATGGGCGGGCACAAGGTGATGGGGCTGAGGCCTCCTCATCATCCGATGCTCCTGCGAATGCTCAAAGAACCTGCCCCCAGAAATATGTTACTGCACTTCCAGTGCCTAGAAATCTGCCAGACAGGGTACAATGTCTTTCACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1846

Amino Acids

200.62

Weight (kDa)

6.61

Isoelectric Point (pI)

56.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1867, 4267
AasI GACNNNNNNGTC 1 cut(s) 3580
Acc36I ACCTGC 5 cut(s) 1270, 1867, 2707, 4267, 5474
AccB1I GGYRCC 1 cut(s) 4534
AccB7I CCANNNNNTGG 3 cut(s) 3756, 4259, 5356
AccBSI CCGCTC 1 cut(s) 4901
AccI GTMKAC 4 cut(s) 419, 1046, 2879, 2897
AccIII TCCGGA 1 cut(s) 4364
AciI CCGC 9 cut(s) 77, 2207, 2516, 3521, 4298, 4526, 4901, 4940, 5401
AclWI GGATC 8 cut(s) 154, 850, 1090, 1307, 1747, 1842, 3076, 5361
AcoI YGGCCR 4 cut(s) 43, 773, 3463, 4132
AcuI CTGAAG 8 cut(s) 468, 1341, 2109, 2123, 2995, 3069, 3758, 5040
AcvI CACGTG 1 cut(s) 2689
AcyI GRCGYC 2 cut(s) 741, 4535
AdeI CACNNNGTG 3 cut(s) 2974, 5129, 5411
AfeI AGCGCT 1 cut(s) 2263
AflIII ACRYGT 3 cut(s) 853, 2686, 3030
AhlI ACTAGT 1 cut(s) 3557
AjiI CACGTC 1 cut(s) 3033
AjuI GAANNNNNNNTTGG 6 cut(s) 480, 512, 1545, 1577, 4141, 4173
Alw21I GWGCWC 2 cut(s) 1468, 3553
AlwI GGATC 8 cut(s) 154, 850, 1090, 1307, 1747, 1842, 3076, 5361
AlwNI CAGNNNCTG 8 cut(s) 194, 386, 883, 2546, 3266, 3692, 4259, 5356
Ama87I CYCGRG 3 cut(s) 2724, 3900, 4920
Aor13HI TCCGGA 1 cut(s) 4364
Aor51HI AGCGCT 1 cut(s) 2263
ArsI GACNNNNNNTTYG 6 cut(s) 520, 552, 1982, 2014, 3946, 3978
Asp700I GAANNNNTTC 2 cut(s) 1963, 3917
AspLEI GCGC 5 cut(s) 888, 1379, 2264, 2869, 4537
AsuC2I CCSGG 3 cut(s) 2416, 3901, 3902
AsuII TTCGAA 1 cut(s) 1543
AvaI CYCGRG 3 cut(s) 2724, 3900, 4920
BaeGI GKGCMC 1 cut(s) 5407
BaeI ACNNNNGTAYC 4 cut(s) 4026, 4059, 4341, 4374
BalI TGGCCA 3 cut(s) 45, 775, 3465
BanI GGYRCC 1 cut(s) 4534
BanII GRGCYC 2 cut(s) 3553, 4921
BarI GAAGNNNNNNTAC 2 cut(s) 4477, 4509
BauI CACGAG 3 cut(s) 432, 3629, 4665
BbrPI CACGTG 1 cut(s) 2689
BbsI GAAGAC 4 cut(s) 552, 2156, 3165, 5268
Bbv12I GWGCWC 2 cut(s) 1468, 3553
BbvCI CCTCAGC 1 cut(s) 5421
BceAI ACGGC 2 cut(s) 2115, 4119
BcgI CGANNNNNNTGC 4 cut(s) 2705, 2739, 5429, 5463
BciVI GTATCC 3 cut(s) 370, 1506, 4399
BclI TGATCA 5 cut(s) 916, 1039, 3022, 4225, 4345
BcnI CCSGG 3 cut(s) 2416, 3901, 3902
BcuI ACTAGT 1 cut(s) 3557
BfmI CTRYAG 6 cut(s) 809, 1860, 3072, 3615, 5070, 5137
BfoI RGCGCY 3 cut(s) 1380, 2265, 4538
BfuAI ACCTGC 5 cut(s) 1270, 1867, 2707, 4267, 5474
BfuI GTATCC 3 cut(s) 370, 1506, 4399
BlpI GCTNAGC 2 cut(s) 3693, 4382
BmcAI AGTACT 1 cut(s) 4708
BmeT110I CYCGRG 3 cut(s) 2724, 3900, 4920
BmgBI CACGTC 1 cut(s) 3033
BmrI ACTGGG 2 cut(s) 1686, 4349
BmuI ACTGGG 2 cut(s) 1686, 4349
BoxI GACNNNNGTC 1 cut(s) 1869
BpiI GAAGAC 4 cut(s) 552, 2156, 3165, 5268
BplI GAGNNNNNCTC 4 cut(s) 4711, 4743, 5414, 5446
BpmI CTGGAG 2 cut(s) 1542, 5378
Bpu10I CCTNAGC 2 cut(s) 3334, 5421
Bpu1102I GCTNAGC 2 cut(s) 3693, 4382
Bpu14I TTCGAA 1 cut(s) 1543
BpuEI CTTGAG 8 cut(s) 145, 934, 1564, 2978, 3093, 3285, 4500, 5356
BpuMI CCSGG 3 cut(s) 2416, 3901, 3902
BsaAI YACGTR 3 cut(s) 584, 2558, 2689
BsaBI GATNNNNATC 1 cut(s) 1350
BsaHI GRCGYC 2 cut(s) 741, 4535
BsaI GGTCTC 2 cut(s) 2725, 4804
BsaWI WCCGGW 3 cut(s) 1261, 4009, 4364
BsaXI ACNNNNNCTCC 6 cut(s) 12, 42, 2866, 2896, 5164, 5194
Bse118I RCCGGY 1 cut(s) 994
Bse3DI GCAATG 7 cut(s) 621, 696, 1005, 1172, 2599, 4635, 4686
Bse8I GATNNNNATC 1 cut(s) 1350
BseAI TCCGGA 1 cut(s) 4364
BseJI GATNNNNATC 1 cut(s) 1350
BseMI GCAATG 7 cut(s) 621, 696, 1005, 1172, 2599, 4635, 4686
BseRI GAGGAG 9 cut(s) 1387, 1654, 1776, 2367, 3123, 3558, 5040, 5172, 5419
BseSI GKGCMC 1 cut(s) 5407
BseX3I CGGCCG 1 cut(s) 4132
BseYI CCCAGC 2 cut(s) 2712, 3831
BsgI GTGCAG 5 cut(s) 1437, 2916, 3750, 4284, 5472
Bsh1285I CGRYCG 3 cut(s) 1017, 1021, 4135
BshNI GGYRCC 1 cut(s) 4534
BsiEI CGRYCG 3 cut(s) 1017, 1021, 4135
BsiHKAI GWGCWC 2 cut(s) 1468, 3553
BsiHKCI CYCGRG 3 cut(s) 2724, 3900, 4920
BsiSI CCGG 7 cut(s) 266, 995, 1262, 2415, 3901, 4010, 4365
BslFI GGGAC 6 cut(s) 847, 887, 1579, 3634, 3703, 4269
BsmBI CGTCTC 2 cut(s) 1758, 2542
BsmFI GGGAC 6 cut(s) 847, 887, 1579, 3634, 3703, 4269
BsmI GAATGC 2 cut(s) 1633, 5458
Bso31I GGTCTC 2 cut(s) 2725, 4804
BsoBI CYCGRG 3 cut(s) 2724, 3900, 4920
Bsp119I TTCGAA 1 cut(s) 1543
Bsp1286I GDGCHC 4 cut(s) 1468, 3553, 4921, 5407
Bsp13I TCCGGA 1 cut(s) 4364
Bsp1407I TGTACA 1 cut(s) 1444
Bsp1720I GCTNAGC 2 cut(s) 3693, 4382
Bsp19I CCATGG 3 cut(s) 1209, 3868, 5395
BspACI CCGC 9 cut(s) 77, 2207, 2516, 3521, 4298, 4526, 4901, 4940, 5401
BspEI TCCGGA 1 cut(s) 4364
BspHI TCATGA 1 cut(s) 2740
BspMAI CTGCAG 5 cut(s) 813, 1864, 3619, 5074, 5141
BspMI ACCTGC 5 cut(s) 1270, 1867, 2707, 4267, 5474
BspPI GGATC 8 cut(s) 154, 850, 1090, 1307, 1747, 1842, 3076, 5361
BspQI GCTCTTC 1 cut(s) 5089
BspT104I TTCGAA 1 cut(s) 1543
BspT107I GGYRCC 1 cut(s) 4534
BspTNI GGTCTC 2 cut(s) 2725, 4804
BsrBI CCGCTC 1 cut(s) 4901
BsrDI GCAATG 7 cut(s) 621, 696, 1005, 1172, 2599, 4635, 4686
BsrFI RCCGGY 1 cut(s) 994
BsrGI TGTACA 1 cut(s) 1444
BssAI RCCGGY 1 cut(s) 994
BssNAI GTATAC 1 cut(s) 1047
BssNI GRCGYC 2 cut(s) 741, 4535
BssSI CACGAG 3 cut(s) 432, 3629, 4665
BssT1I CCWWGG 9 cut(s) 566, 1209, 1222, 2984, 3804, 3868, 4850, 4869, 5395
Bst1107I GTATAC 1 cut(s) 1047
Bst2BI CACGAG 3 cut(s) 432, 3629, 4665
Bst4CI ACNGT 7 cut(s) 1868, 1949, 2306, 3528, 4512, 4804, 5192
Bst6I CTCTTC 4 cut(s) 1515, 2099, 4232, 5089
BstACI GRCGYC 2 cut(s) 741, 4535
BstAPI GCANNNNNTGC 4 cut(s) 707, 3164, 4582, 5038
BstAUI TGTACA 1 cut(s) 1444
BstBAI YACGTR 3 cut(s) 584, 2558, 2689
BstBI TTCGAA 1 cut(s) 1543
BstDSI CCRYGG 3 cut(s) 1209, 3868, 5395
BstEII GGTNACC 1 cut(s) 713
BstENI CCTNNNNNAGG 2 cut(s) 1815, 2890
BstH2I RGCGCY 3 cut(s) 1380, 2265, 4538
BstHHI GCGC 5 cut(s) 888, 1379, 2264, 2869, 4537
BstMCI CGRYCG 3 cut(s) 1017, 1021, 4135
BstNSI RCATGY 8 cut(s) 227, 455, 598, 857, 1075, 2116, 2854, 4664
BstPAI GACNNNNGTC 1 cut(s) 1869
BstPI GGTNACC 1 cut(s) 713
BstSFI CTRYAG 6 cut(s) 809, 1860, 3072, 3615, 5070, 5137
BstSLI GKGCMC 1 cut(s) 5407
BstV2I GAAGAC 4 cut(s) 552, 2156, 3165, 5268
BstX2I RGATCY 7 cut(s) 146, 842, 1082, 1312, 1739, 3068, 5353
BstXI CCANNNNNNTGG 2 cut(s) 737, 3380
BstYI RGATCY 7 cut(s) 146, 842, 1082, 1312, 1739, 3068, 5353
BstZ17I GTATAC 1 cut(s) 1047
BstZI CGGCCG 1 cut(s) 4132
BsuI GTATCC 3 cut(s) 370, 1506, 4399
BtgI CCRYGG 3 cut(s) 1209, 3868, 5395
BtrI CACGTC 1 cut(s) 3033
BtsI GCAGTG 5 cut(s) 881, 1159, 2511, 4062, 5146
BveI ACCTGC 5 cut(s) 1270, 1867, 2707, 4267, 5474
CaiI CAGNNNCTG 8 cut(s) 194, 386, 883, 2546, 3266, 3692, 4259, 5356
CciI TCATGA 1 cut(s) 2740
CfoI GCGC 5 cut(s) 888, 1379, 2264, 2869, 4537
Cfr10I RCCGGY 1 cut(s) 994
Cfr9I CCCGGG 1 cut(s) 3900
CseI GACGC 3 cut(s) 59, 730, 4763
CsiI ACCWGGT 1 cut(s) 961
CspCI CAANNNNNGTGG 2 cut(s) 5238, 5273
DinI GGCGCC 1 cut(s) 4536
DraI TTTAAA 4 cut(s) 168, 3826, 4143, 4567
DraIII CACNNNGTG 3 cut(s) 2974, 5129, 5411
DrdI GACNNNNNNGTC 1 cut(s) 3580
DseDI GACNNNNNNGTC 1 cut(s) 3580
EaeI YGGCCR 4 cut(s) 43, 773, 3463, 4132
EagI CGGCCG 1 cut(s) 4132
Eam1104I CTCTTC 4 cut(s) 1515, 2099, 4232, 5089
EarI CTCTTC 4 cut(s) 1515, 2099, 4232, 5089
EciI GGCGGA 1 cut(s) 4955
Ecl136II GAGCTC 1 cut(s) 3551
EclXI CGGCCG 1 cut(s) 4132
Eco130I CCWWGG 9 cut(s) 566, 1209, 1222, 2984, 3804, 3868, 4850, 4869, 5395
Eco147I AGGCCT 1 cut(s) 5426
Eco24I GRGCYC 2 cut(s) 3553, 4921
Eco31I GGTCTC 2 cut(s) 2725, 4804
Eco32I GATATC 1 cut(s) 1011
Eco47III AGCGCT 1 cut(s) 2263
Eco52I CGGCCG 1 cut(s) 4132
Eco53kI GAGCTC 1 cut(s) 3551
Eco57I CTGAAG 8 cut(s) 468, 1341, 2109, 2123, 2995, 3069, 3758, 5040
Eco72I CACGTG 1 cut(s) 2689
Eco88I CYCGRG 3 cut(s) 2724, 3900, 4920
Eco91I GGTNACC 1 cut(s) 713
EcoICRI GAGCTC 1 cut(s) 3551
EcoNI CCTNNNNNAGG 2 cut(s) 1815, 2890
EcoO109I RGGNCCY 1 cut(s) 3355
EcoO65I GGTNACC 1 cut(s) 713
EcoRI GAATTC 4 cut(s) 463, 1217, 1651, 4459
EcoRV GATATC 1 cut(s) 1011
EcoT14I CCWWGG 9 cut(s) 566, 1209, 1222, 2984, 3804, 3868, 4850, 4869, 5395
EcoT22I ATGCAT 8 cut(s) 324, 2118, 2454, 2497, 4426, 4447, 4492, 4593
EcoT38I GRGCYC 2 cut(s) 3553, 4921
EgeI GGCGCC 1 cut(s) 4536
EheI GGCGCC 1 cut(s) 4536
ErhI CCWWGG 9 cut(s) 566, 1209, 1222, 2984, 3804, 3868, 4850, 4869, 5395
Esp3I CGTCTC 2 cut(s) 1758, 2542
FalI AAGNNNNNCTT 4 cut(s) 1441, 1473, 1948, 1980
FaqI GGGAC 6 cut(s) 847, 887, 1579, 3634, 3703, 4269
FauI CCCGC 3 cut(s) 2214, 2509, 5394
FauNDI CATATG 1 cut(s) 2952
FbaI TGATCA 5 cut(s) 916, 1039, 3022, 4225, 4345
FblI GTMKAC 4 cut(s) 419, 1046, 2879, 2897
FriOI GRGCYC 2 cut(s) 3553, 4921
GlaI GCGC 5 cut(s) 887, 1378, 2263, 2868, 4536
GsaI CCCAGC 2 cut(s) 2716, 3835
GsuI CTGGAG 2 cut(s) 1542, 5378
HaeII RGCGCY 3 cut(s) 1380, 2265, 4538
HapII CCGG 7 cut(s) 266, 995, 1262, 2415, 3901, 4010, 4365
HgaI GACGC 3 cut(s) 59, 730, 4763
HhaI GCGC 5 cut(s) 888, 1379, 2264, 2869, 4537
Hin1I GRCGYC 2 cut(s) 741, 4535
Hin6I GCGC 5 cut(s) 886, 1377, 2262, 2867, 4535
HinP1I GCGC 5 cut(s) 886, 1377, 2262, 2867, 4535
HincII GTYRAC 6 cut(s) 157, 521, 2031, 2815, 2948, 3431
HindII GTYRAC 6 cut(s) 157, 521, 2031, 2815, 2948, 3431
HindIII AAGCTT 3 cut(s) 687, 4125, 5213
HpaI GTTAAC 2 cut(s) 157, 2815
HpaII CCGG 7 cut(s) 266, 995, 1262, 2415, 3901, 4010, 4365
HpyCH4III ACNGT 7 cut(s) 1868, 1949, 2306, 3528, 4512, 4804, 5192
HpyCH4IV ACGT 7 cut(s) 583, 1767, 2557, 2688, 2876, 3032, 3707
HpySE526I ACGT 7 cut(s) 583, 1767, 2557, 2688, 2876, 3032, 3707
Hsp92I GRCGYC 2 cut(s) 741, 4535
HspAI GCGC 5 cut(s) 886, 1377, 2262, 2867, 4535
KasI GGCGCC 1 cut(s) 4534
Kpn2I TCCGGA 1 cut(s) 4364
Ksp22I TGATCA 5 cut(s) 916, 1039, 3022, 4225, 4345
KspAI GTTAAC 2 cut(s) 157, 2815
LguI GCTCTTC 1 cut(s) 5089
LmnI GCTCC 8 cut(s) 818, 1374, 2167, 2248, 2989, 3136, 3739, 5449
MabI ACCWGGT 1 cut(s) 961
MaeII ACGT 7 cut(s) 583, 1767, 2557, 2688, 2876, 3032, 3707
MbiI CCGCTC 1 cut(s) 4901
MfeI CAATTG 2 cut(s) 2422, 5036
MflI RGATCY 7 cut(s) 146, 842, 1082, 1312, 1739, 3068, 5353
MhlI GDGCHC 4 cut(s) 1468, 3553, 4921, 5407
MlsI TGGCCA 3 cut(s) 45, 775, 3465
MluNI TGGCCA 3 cut(s) 45, 775, 3465
Mly113I GGCGCC 1 cut(s) 4535
MlyI GAGTC 9 cut(s) 220, 392, 1561, 1816, 2417, 3669, 4264, 4291, 4729
MmeI TCCRAC 6 cut(s) 124, 786, 1222, 1340, 1812, 4433
Mox20I TGGCCA 3 cut(s) 45, 775, 3465
Mph1103I ATGCAT 8 cut(s) 324, 2118, 2454, 2497, 4426, 4447, 4492, 4593
MroI TCCGGA 1 cut(s) 4364
MroXI GAANNNNTTC 2 cut(s) 1963, 3917
MscI TGGCCA 3 cut(s) 45, 775, 3465
MslI CAYNNNNRTG 6 cut(s) 626, 1974, 2997, 3378, 3726, 4665
Msp20I TGGCCA 3 cut(s) 45, 775, 3465
MspA1I CMGCKG 3 cut(s) 670, 3127, 4343
MspI CCGG 7 cut(s) 266, 995, 1262, 2415, 3901, 4010, 4365
MunI CAATTG 2 cut(s) 2422, 5036
Mva1269I GAATGC 2 cut(s) 1633, 5458
NarI GGCGCC 1 cut(s) 4535
NciI CCSGG 3 cut(s) 2416, 3901, 3902
NcoI CCATGG 3 cut(s) 1209, 3868, 5395
NdeI CATATG 1 cut(s) 2952
NmuCI GTSAC 7 cut(s) 57, 590, 742, 2306, 2689, 2777, 3077
NsiI ATGCAT 8 cut(s) 324, 2118, 2454, 2497, 4426, 4447, 4492, 4593
NspI RCATGY 8 cut(s) 227, 455, 598, 857, 1075, 2116, 2854, 4664
NspV TTCGAA 1 cut(s) 1543
PaeI GCATGC 4 cut(s) 1075, 2116, 2854, 4664
PaeR7I CTCGAG 2 cut(s) 2724, 4920
PagI TCATGA 1 cut(s) 2740
PaqCI CACCTGC 2 cut(s) 1867, 4267
PasI CCCWGGG 1 cut(s) 4288
PceI AGGCCT 1 cut(s) 5426
PciI ACATGT 1 cut(s) 853
PciSI GCTCTTC 1 cut(s) 5089
PctI GAATGC 2 cut(s) 1633, 5458
PdmI GAANNNNTTC 2 cut(s) 1963, 3917
PflFI GACNNNGTC 1 cut(s) 26
PflMI CCANNNNNTGG 3 cut(s) 3756, 4259, 5356
PfoI TCCNGGA 1 cut(s) 2414
PleI GAGTC 9 cut(s) 219, 391, 1561, 1815, 2416, 3668, 4264, 4290, 4728
PluTI GGCGCC 1 cut(s) 4538
PmaCI CACGTG 1 cut(s) 2689
PmlI CACGTG 1 cut(s) 2689
PpsI GAGTC 9 cut(s) 219, 391, 1561, 1815, 2416, 3668, 4264, 4290, 4728
Ppu21I YACGTR 3 cut(s) 584, 2558, 2689
PscI ACATGT 1 cut(s) 853
PshAI GACNNNNGTC 1 cut(s) 1869
Psp124BI GAGCTC 1 cut(s) 3553
PspCI CACGTG 1 cut(s) 2689
PspEI GGTNACC 1 cut(s) 713
PspFI CCCAGC 2 cut(s) 2712, 3831
PspXI VCTCGAGB 1 cut(s) 4920
PsrI GAACNNNNNNTAC 2 cut(s) 2209, 2241
PstI CTGCAG 5 cut(s) 813, 1864, 3619, 5074, 5141
PstNI CAGNNNCTG 8 cut(s) 194, 386, 883, 2546, 3266, 3692, 4259, 5356
PsuI RGATCY 7 cut(s) 146, 842, 1082, 1312, 1739, 3068, 5353
PsyI GACNNNGTC 1 cut(s) 26
PvuII CAGCTG 3 cut(s) 670, 3127, 4343
RseI CAYNNNNRTG 6 cut(s) 626, 1974, 2997, 3378, 3726, 4665
SacI GAGCTC 1 cut(s) 3553
SapI GCTCTTC 1 cut(s) 5089
ScaI AGTACT 1 cut(s) 4708
SchI GAGTC 9 cut(s) 220, 392, 1561, 1816, 2417, 3669, 4264, 4291, 4729
SduI GDGCHC 4 cut(s) 1468, 3553, 4921, 5407
SexAI ACCWGGT 1 cut(s) 961
SfcI CTRYAG 6 cut(s) 809, 1860, 3072, 3615, 5070, 5137
SfoI GGCGCC 1 cut(s) 4536
Sfr274I CTCGAG 2 cut(s) 2724, 4920
SfuI TTCGAA 1 cut(s) 1543
SlaI CTCGAG 2 cut(s) 2724, 4920
SmaI CCCGGG 1 cut(s) 3902
SmiMI CAYNNNNRTG 6 cut(s) 626, 1974, 2997, 3378, 3726, 4665
SpeI ACTAGT 1 cut(s) 3557
SphI GCATGC 4 cut(s) 1075, 2116, 2854, 4664
SseBI AGGCCT 1 cut(s) 5426
SsiI CCGC 9 cut(s) 77, 2207, 2516, 3521, 4298, 4526, 4901, 4940, 5401
SspDI GGCGCC 1 cut(s) 4534
SspI AATATT 2 cut(s) 3637, 4581
SstI GAGCTC 1 cut(s) 3553
StuI AGGCCT 1 cut(s) 5426
StyI CCWWGG 9 cut(s) 566, 1209, 1222, 2984, 3804, 3868, 4850, 4869, 5395
TaaI ACNGT 7 cut(s) 1868, 1949, 2306, 3528, 4512, 4804, 5192
TaiI ACGT 7 cut(s) 586, 1770, 2560, 2691, 2879, 3035, 3710
TaqI TCGA 4 cut(s) 1180, 1543, 2725, 4921
TaqII GACCGA 2 cut(s) 1003, 1007
TatI WGTACW 4 cut(s) 1444, 4189, 4205, 4706
TauI GCSGC 1 cut(s) 4904
TseFI GTSAC 7 cut(s) 57, 590, 742, 2306, 2689, 2777, 3077
Tsp45I GTSAC 7 cut(s) 57, 590, 742, 2306, 2689, 2777, 3077
TspGWI ACGGA 3 cut(s) 204, 2168, 3160
TspMI CCCGGG 1 cut(s) 3900
Tth111I GACNNNGTC 1 cut(s) 26
Van91I CCANNNNNTGG 3 cut(s) 3756, 4259, 5356
XagI CCTNNNNNAGG 2 cut(s) 1815, 2890
XbaI TCTAGA 5 cut(s) 407, 1094, 1655, 5114, 5156
XceI RCATGY 8 cut(s) 227, 455, 598, 857, 1075, 2116, 2854, 4664
XcmI CCANNNNNNNNNTGG 3 cut(s) 38, 140, 1387
XhoI CTCGAG 2 cut(s) 2724, 4920
XmaI CCCGGG 1 cut(s) 3900
XmiI GTMKAC 4 cut(s) 419, 1046, 2879, 2897
XmnI GAANNNNTTC 2 cut(s) 1963, 3917
ZrmI AGTACT 1 cut(s) 4708
Zsp2I ATGCAT 8 cut(s) 324, 2118, 2454, 2497, 4426, 4447, 4492, 4593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.