isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07940 AT5G07940 AT5G07940 AT5G07940 AT5G07940 AT5G07970 AT5G07970 AT5G07970 AT5G07980 AT5G07980 |
| fragaria_vesca | FvH4_5g14040 FvH4_5g14040 FvH4_5g14040 FvH4_5g14040 FvH4_5g14040 |
| malus_domestica | MD06G1200700.v1.1 MD14G1210400.v1.1 |
| prunus_persica | Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 |
| pyrus_communis | pycom06g17720 pycom14g17370 |
| rosa_chinensis | RchiOBHm_Chr7g0182781 |
| rosa_laevigata | RLG00000005100 |
| rosa_multiflora | Rmu_sc0000014.1_g000028 |
| rosa_roxburghii | Rroxscaffold_3G00270980 |
| rosa_rugosa | Rorug06G0450400 Rorug06G0450500 Rorug06G0450600 Rorug06G0450700 |
| rosa_samantha | Rh7AG054000 Rh7BG053500 Rh7CG055100 Rh7DG053300 |
| rosa_wichuraiana | Rw7G004400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 2401, 4705 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 4114 |
| Acc36I | ACCTGC | 5 cut(s) | 1804, 2401, 3241, 4705, 5912 |
| AccB1I | GGYRCC | 1 cut(s) | 4972 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 4290, 4697, 5794 |
| AccBSI | CCGCTC | 1 cut(s) | 5339 |
| AccI | GTMKAC | 4 cut(s) | 953, 1580, 3413, 3431 |
| AccII | CGCG | 2 cut(s) | 408, 410 |
| AccIII | TCCGGA | 1 cut(s) | 4802 |
| AcoI | YGGCCR | 5 cut(s) | 403, 577, 1307, 3997, 4570 |
| AcuI | CTGAAG | 8 cut(s) | 32, 1002, 1875, 2643, 2657, 3529, 3603, 4292 |
| AcyI | GRCGYC | 3 cut(s) | 413, 1275, 4973 |
| AdeI | CACNNNGTG | 4 cut(s) | 1832, 3508, 5567, 5849 |
| AfeI | AGCGCT | 1 cut(s) | 2797 |
| AflIII | ACRYGT | 3 cut(s) | 1387, 3220, 3564 |
| AhlI | ACTAGT | 1 cut(s) | 4091 |
| AjiI | CACGTC | 1 cut(s) | 3567 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 286, 318, 1014, 1046, 2079, 2111, 4579, 4611 |
| Alw21I | GWGCWC | 3 cut(s) | 281, 2002, 4087 |
| AlwNI | CAGNNNCTG | 9 cut(s) | 728, 920, 1417, 2558, 3080, 3800, 4226, 4697, 5794 |
| Ama87I | CYCGRG | 3 cut(s) | 3258, 4338, 5358 |
| Aor13HI | TCCGGA | 1 cut(s) | 4802 |
| Aor51HI | AGCGCT | 1 cut(s) | 2797 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 1054, 1086, 2516, 2548, 4384, 4416 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2497, 4355 |
| AspLEI | GCGC | 5 cut(s) | 410, 1422, 1913, 2798, 4975 |
| AsuC2I | CCSGG | 3 cut(s) | 2950, 4339, 4340 |
| AsuII | TTCGAA | 2 cut(s) | 343, 2077 |
| AvaI | CYCGRG | 3 cut(s) | 3258, 4338, 5358 |
| BaeGI | GKGCMC | 1 cut(s) | 5845 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 4464, 4497, 4779, 4812 |
| BalI | TGGCCA | 3 cut(s) | 579, 1309, 3999 |
| BamHI | GGATCC | 1 cut(s) | 154 |
| BanI | GGYRCC | 1 cut(s) | 4972 |
| BanII | GRGCYC | 4 cut(s) | 64, 281, 4087, 5359 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4915, 4947 |
| BauI | CACGAG | 3 cut(s) | 966, 4163, 5103 |
| BbsI | GAAGAC | 4 cut(s) | 1086, 2690, 3699, 5706 |
| Bbv12I | GWGCWC | 3 cut(s) | 281, 2002, 4087 |
| BbvCI | CCTCAGC | 1 cut(s) | 5859 |
| BceAI | ACGGC | 3 cut(s) | 415, 2649, 4557 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 3239, 3273, 5566, 5600, 5867, 5901 |
| BciVI | GTATCC | 3 cut(s) | 904, 2040, 4837 |
| BclI | TGATCA | 4 cut(s) | 1450, 3556, 4663, 4783 |
| BcnI | CCSGG | 3 cut(s) | 2950, 4339, 4340 |
| BcuI | ACTAGT | 1 cut(s) | 4091 |
| BfmI | CTRYAG | 6 cut(s) | 1343, 2394, 3606, 4149, 5508, 5575 |
| BfoI | RGCGCY | 3 cut(s) | 1914, 2799, 4976 |
| BfuAI | ACCTGC | 5 cut(s) | 1804, 2401, 3241, 4705, 5912 |
| BfuI | GTATCC | 3 cut(s) | 904, 2040, 4837 |
| BlpI | GCTNAGC | 2 cut(s) | 4227, 4820 |
| BmcAI | AGTACT | 1 cut(s) | 5146 |
| BmeT110I | CYCGRG | 3 cut(s) | 3258, 4338, 5358 |
| BmgBI | CACGTC | 1 cut(s) | 3567 |
| BmrI | ACTGGG | 3 cut(s) | 2220, 3057, 4787 |
| BmuI | ACTGGG | 3 cut(s) | 2220, 3057, 4787 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2403 |
| BpiI | GAAGAC | 4 cut(s) | 1086, 2690, 3699, 5706 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 5149, 5181, 5852, 5884 |
| BpmI | CTGGAG | 2 cut(s) | 2076, 5816 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3868, 5859 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 4227, 4820 |
| Bpu14I | TTCGAA | 2 cut(s) | 343, 2077 |
| BpuEI | CTTGAG | 8 cut(s) | 679, 1468, 2098, 3512, 3627, 3819, 4938, 5794 |
| BpuMI | CCSGG | 3 cut(s) | 2950, 4339, 4340 |
| BsaAI | YACGTR | 2 cut(s) | 1118, 3092 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1884 |
| BsaHI | GRCGYC | 3 cut(s) | 413, 1275, 4973 |
| BsaI | GGTCTC | 2 cut(s) | 3259, 5242 |
| BsaWI | WCCGGW | 3 cut(s) | 1795, 4447, 4802 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 546, 576, 3400, 3430, 5602, 5632 |
| Bse118I | RCCGGY | 1 cut(s) | 1528 |
| Bse3DI | GCAATG | 7 cut(s) | 1155, 1230, 1539, 1706, 3133, 5073, 5124 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1884 |
| BseAI | TCCGGA | 1 cut(s) | 4802 |
| BseJI | GATNNNNATC | 1 cut(s) | 1884 |
| BseMI | GCAATG | 7 cut(s) | 1155, 1230, 1539, 1706, 3133, 5073, 5124 |
| BseRI | GAGGAG | 9 cut(s) | 1921, 2188, 2310, 2901, 3657, 4092, 5478, 5610, 5857 |
| BseSI | GKGCMC | 1 cut(s) | 5845 |
| BseX3I | CGGCCG | 2 cut(s) | 403, 4570 |
| BseYI | CCCAGC | 3 cut(s) | 167, 187, 3246 |
| BsgI | GTGCAG | 5 cut(s) | 1971, 3450, 4284, 4722, 5910 |
| Bsh1236I | CGCG | 2 cut(s) | 408, 410 |
| Bsh1285I | CGRYCG | 4 cut(s) | 406, 1551, 1555, 4573 |
| BshNI | GGYRCC | 1 cut(s) | 4972 |
| BsiEI | CGRYCG | 4 cut(s) | 406, 1551, 1555, 4573 |
| BsiHKAI | GWGCWC | 3 cut(s) | 281, 2002, 4087 |
| BsiHKCI | CYCGRG | 3 cut(s) | 3258, 4338, 5358 |
| BsiSI | CCGG | 7 cut(s) | 800, 1529, 1796, 2949, 4339, 4448, 4803 |
| BslFI | GGGAC | 6 cut(s) | 1381, 1421, 2113, 4168, 4237, 4707 |
| BsmBI | CGTCTC | 2 cut(s) | 2292, 3076 |
| BsmFI | GGGAC | 6 cut(s) | 1381, 1421, 2113, 4168, 4237, 4707 |
| BsmI | GAATGC | 2 cut(s) | 2167, 5896 |
| Bso31I | GGTCTC | 2 cut(s) | 3259, 5242 |
| BsoBI | CYCGRG | 3 cut(s) | 3258, 4338, 5358 |
| Bsp119I | TTCGAA | 2 cut(s) | 343, 2077 |
| Bsp1286I | GDGCHC | 6 cut(s) | 64, 281, 2002, 4087, 5359, 5845 |
| Bsp13I | TCCGGA | 1 cut(s) | 4802 |
| Bsp1407I | TGTACA | 1 cut(s) | 1978 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 4227, 4820 |
| Bsp19I | CCATGG | 2 cut(s) | 1743, 5833 |
| BspEI | TCCGGA | 1 cut(s) | 4802 |
| BspFNI | CGCG | 2 cut(s) | 408, 410 |
| BspHI | TCATGA | 2 cut(s) | 3274, 3823 |
| BspMAI | CTGCAG | 5 cut(s) | 1347, 2398, 4153, 5512, 5579 |
| BspMI | ACCTGC | 5 cut(s) | 1804, 2401, 3241, 4705, 5912 |
| BspQI | GCTCTTC | 1 cut(s) | 5527 |
| BspT104I | TTCGAA | 2 cut(s) | 343, 2077 |
| BspT107I | GGYRCC | 1 cut(s) | 4972 |
| BspTNI | GGTCTC | 2 cut(s) | 3259, 5242 |
| BsrBI | CCGCTC | 1 cut(s) | 5339 |
| BsrDI | GCAATG | 7 cut(s) | 1155, 1230, 1539, 1706, 3133, 5073, 5124 |
| BsrFI | RCCGGY | 1 cut(s) | 1528 |
| BsrGI | TGTACA | 1 cut(s) | 1978 |
| BssAI | RCCGGY | 1 cut(s) | 1528 |
| BssNAI | GTATAC | 1 cut(s) | 1581 |
| BssNI | GRCGYC | 3 cut(s) | 413, 1275, 4973 |
| BssSI | CACGAG | 3 cut(s) | 966, 4163, 5103 |
| BssT1I | CCWWGG | 7 cut(s) | 1100, 1743, 1756, 3518, 5288, 5307, 5833 |
| Bst1107I | GTATAC | 1 cut(s) | 1581 |
| Bst2BI | CACGAG | 3 cut(s) | 966, 4163, 5103 |
| Bst4CI | ACNGT | 9 cut(s) | 33, 420, 2402, 2483, 2840, 4062, 4950, 5242, 5630 |
| Bst6I | CTCTTC | 4 cut(s) | 2049, 2633, 4670, 5527 |
| BstACI | GRCGYC | 3 cut(s) | 413, 1275, 4973 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1241, 5020, 5476 |
| BstAUI | TGTACA | 1 cut(s) | 1978 |
| BstBAI | YACGTR | 2 cut(s) | 1118, 3092 |
| BstBI | TTCGAA | 2 cut(s) | 343, 2077 |
| BstDSI | CCRYGG | 2 cut(s) | 1743, 5833 |
| BstEII | GGTNACC | 1 cut(s) | 1247 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2349, 3424 |
| BstFNI | CGCG | 2 cut(s) | 408, 410 |
| BstH2I | RGCGCY | 3 cut(s) | 1914, 2799, 4976 |
| BstHHI | GCGC | 5 cut(s) | 410, 1422, 1913, 2798, 4975 |
| BstMCI | CGRYCG | 4 cut(s) | 406, 1551, 1555, 4573 |
| BstNSI | RCATGY | 9 cut(s) | 761, 989, 1132, 1391, 1609, 2650, 3224, 3388, 5102 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2403 |
| BstPI | GGTNACC | 1 cut(s) | 1247 |
| BstSFI | CTRYAG | 6 cut(s) | 1343, 2394, 3606, 4149, 5508, 5575 |
| BstSLI | GKGCMC | 1 cut(s) | 5845 |
| BstUI | CGCG | 2 cut(s) | 408, 410 |
| BstV2I | GAAGAC | 4 cut(s) | 1086, 2690, 3699, 5706 |
| BstX2I | RGATCY | 8 cut(s) | 154, 680, 1376, 1616, 1846, 2273, 3602, 5791 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1271, 3914 |
| BstYI | RGATCY | 8 cut(s) | 154, 680, 1376, 1616, 1846, 2273, 3602, 5791 |
| BstZ17I | GTATAC | 1 cut(s) | 1581 |
| BstZI | CGGCCG | 2 cut(s) | 403, 4570 |
| BsuI | GTATCC | 3 cut(s) | 904, 2040, 4837 |
| BtgI | CCRYGG | 2 cut(s) | 1743, 5833 |
| BtrI | CACGTC | 1 cut(s) | 3567 |
| BtsI | GCAGTG | 4 cut(s) | 1415, 1693, 4500, 5584 |
| BveI | ACCTGC | 5 cut(s) | 1804, 2401, 3241, 4705, 5912 |
| CaiI | CAGNNNCTG | 9 cut(s) | 728, 920, 1417, 2558, 3080, 3800, 4226, 4697, 5794 |
| CciI | TCATGA | 2 cut(s) | 3274, 3823 |
| CciNI | GCGGCCGC | 1 cut(s) | 403 |
| CfoI | GCGC | 5 cut(s) | 410, 1422, 1913, 2798, 4975 |
| Cfr10I | RCCGGY | 1 cut(s) | 1528 |
| Cfr9I | CCCGGG | 1 cut(s) | 4338 |
| CpoI | CGGWCCG | 1 cut(s) | 196 |
| CseI | GACGC | 4 cut(s) | 402, 593, 1264, 5201 |
| CsiI | ACCWGGT | 1 cut(s) | 1495 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 5676, 5711 |
| CspI | CGGWCCG | 1 cut(s) | 196 |
| DinI | GGCGCC | 1 cut(s) | 4974 |
| DraI | TTTAAA | 3 cut(s) | 702, 4581, 5005 |
| DraIII | CACNNNGTG | 4 cut(s) | 1832, 3508, 5567, 5849 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 4114 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 4114 |
| EaeI | YGGCCR | 5 cut(s) | 403, 577, 1307, 3997, 4570 |
| EagI | CGGCCG | 2 cut(s) | 403, 4570 |
| Eam1104I | CTCTTC | 4 cut(s) | 2049, 2633, 4670, 5527 |
| EarI | CTCTTC | 4 cut(s) | 2049, 2633, 4670, 5527 |
| EciI | GGCGGA | 1 cut(s) | 5393 |
| Ecl136II | GAGCTC | 2 cut(s) | 279, 4085 |
| EclXI | CGGCCG | 2 cut(s) | 403, 4570 |
| Eco130I | CCWWGG | 7 cut(s) | 1100, 1743, 1756, 3518, 5288, 5307, 5833 |
| Eco147I | AGGCCT | 1 cut(s) | 5864 |
| Eco24I | GRGCYC | 4 cut(s) | 64, 281, 4087, 5359 |
| Eco31I | GGTCTC | 2 cut(s) | 3259, 5242 |
| Eco32I | GATATC | 1 cut(s) | 1545 |
| Eco47III | AGCGCT | 1 cut(s) | 2797 |
| Eco52I | CGGCCG | 2 cut(s) | 403, 4570 |
| Eco53kI | GAGCTC | 2 cut(s) | 279, 4085 |
| Eco57I | CTGAAG | 8 cut(s) | 32, 1002, 1875, 2643, 2657, 3529, 3603, 4292 |
| Eco88I | CYCGRG | 3 cut(s) | 3258, 4338, 5358 |
| Eco91I | GGTNACC | 1 cut(s) | 1247 |
| EcoICRI | GAGCTC | 2 cut(s) | 279, 4085 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2349, 3424 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3889 |
| EcoO65I | GGTNACC | 1 cut(s) | 1247 |
| EcoRI | GAATTC | 4 cut(s) | 997, 1751, 2185, 4897 |
| EcoRV | GATATC | 1 cut(s) | 1545 |
| EcoT14I | CCWWGG | 7 cut(s) | 1100, 1743, 1756, 3518, 5288, 5307, 5833 |
| EcoT22I | ATGCAT | 8 cut(s) | 858, 2652, 2988, 3031, 4864, 4885, 4930, 5031 |
| EcoT38I | GRGCYC | 4 cut(s) | 64, 281, 4087, 5359 |
| EgeI | GGCGCC | 1 cut(s) | 4974 |
| EheI | GGCGCC | 1 cut(s) | 4974 |
| ErhI | CCWWGG | 7 cut(s) | 1100, 1743, 1756, 3518, 5288, 5307, 5833 |
| Esp3I | CGTCTC | 2 cut(s) | 2292, 3076 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1975, 2007, 2482, 2514 |
| FaqI | GGGAC | 6 cut(s) | 1381, 1421, 2113, 4168, 4237, 4707 |
| FauI | CCCGC | 2 cut(s) | 2748, 5832 |
| FauNDI | CATATG | 1 cut(s) | 3486 |
| FbaI | TGATCA | 4 cut(s) | 1450, 3556, 4663, 4783 |
| FblI | GTMKAC | 4 cut(s) | 953, 1580, 3413, 3431 |
| FriOI | GRGCYC | 4 cut(s) | 64, 281, 4087, 5359 |
| GlaI | GCGC | 5 cut(s) | 409, 1421, 1912, 2797, 4974 |
| GsaI | CCCAGC | 3 cut(s) | 171, 191, 3250 |
| GsuI | CTGGAG | 2 cut(s) | 2076, 5816 |
| HaeII | RGCGCY | 3 cut(s) | 1914, 2799, 4976 |
| HapII | CCGG | 7 cut(s) | 800, 1529, 1796, 2949, 4339, 4448, 4803 |
| HgaI | GACGC | 4 cut(s) | 402, 593, 1264, 5201 |
| HhaI | GCGC | 5 cut(s) | 410, 1422, 1913, 2798, 4975 |
| Hin1I | GRCGYC | 3 cut(s) | 413, 1275, 4973 |
| Hin6I | GCGC | 5 cut(s) | 408, 1420, 1911, 2796, 4973 |
| HinP1I | GCGC | 5 cut(s) | 408, 1420, 1911, 2796, 4973 |
| HincII | GTYRAC | 6 cut(s) | 691, 1055, 2565, 3349, 3482, 3965 |
| HindII | GTYRAC | 6 cut(s) | 691, 1055, 2565, 3349, 3482, 3965 |
| HindIII | AAGCTT | 3 cut(s) | 1221, 4563, 5651 |
| HpaI | GTTAAC | 2 cut(s) | 691, 3349 |
| HpaII | CCGG | 7 cut(s) | 800, 1529, 1796, 2949, 4339, 4448, 4803 |
| Hpy99I | CGWCG | 1 cut(s) | 371 |
| HpyCH4III | ACNGT | 9 cut(s) | 33, 420, 2402, 2483, 2840, 4062, 4950, 5242, 5630 |
| HpyCH4IV | ACGT | 6 cut(s) | 1117, 2301, 3091, 3410, 3566, 4241 |
| HpySE526I | ACGT | 6 cut(s) | 1117, 2301, 3091, 3410, 3566, 4241 |
| Hsp92I | GRCGYC | 3 cut(s) | 413, 1275, 4973 |
| HspAI | GCGC | 5 cut(s) | 408, 1420, 1911, 2796, 4973 |
| KasI | GGCGCC | 1 cut(s) | 4972 |
| Kpn2I | TCCGGA | 1 cut(s) | 4802 |
| Ksp22I | TGATCA | 4 cut(s) | 1450, 3556, 4663, 4783 |
| KspAI | GTTAAC | 2 cut(s) | 691, 3349 |
| LguI | GCTCTTC | 1 cut(s) | 5527 |
| LmnI | GCTCC | 8 cut(s) | 1352, 1908, 2701, 2782, 3523, 3670, 4273, 5887 |
| MabI | ACCWGGT | 1 cut(s) | 1495 |
| MaeII | ACGT | 6 cut(s) | 1117, 2301, 3091, 3410, 3566, 4241 |
| MbiI | CCGCTC | 1 cut(s) | 5339 |
| MfeI | CAATTG | 2 cut(s) | 2956, 5474 |
| MflI | RGATCY | 8 cut(s) | 154, 680, 1376, 1616, 1846, 2273, 3602, 5791 |
| MhlI | GDGCHC | 6 cut(s) | 64, 281, 2002, 4087, 5359, 5845 |
| MlsI | TGGCCA | 3 cut(s) | 579, 1309, 3999 |
| MluNI | TGGCCA | 3 cut(s) | 579, 1309, 3999 |
| Mly113I | GGCGCC | 1 cut(s) | 4973 |
| Mox20I | TGGCCA | 3 cut(s) | 579, 1309, 3999 |
| Mph1103I | ATGCAT | 8 cut(s) | 858, 2652, 2988, 3031, 4864, 4885, 4930, 5031 |
| MroI | TCCGGA | 1 cut(s) | 4802 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2497, 4355 |
| MscI | TGGCCA | 3 cut(s) | 579, 1309, 3999 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1160, 2508, 3531, 3912, 4260, 5103 |
| Msp20I | TGGCCA | 3 cut(s) | 579, 1309, 3999 |
| MspA1I | CMGCKG | 4 cut(s) | 171, 1204, 3661, 4781 |
| MspI | CCGG | 7 cut(s) | 800, 1529, 1796, 2949, 4339, 4448, 4803 |
| MunI | CAATTG | 2 cut(s) | 2956, 5474 |
| Mva1269I | GAATGC | 2 cut(s) | 2167, 5896 |
| MvnI | CGCG | 2 cut(s) | 408, 410 |
| NarI | GGCGCC | 1 cut(s) | 4973 |
| NciI | CCSGG | 3 cut(s) | 2950, 4339, 4340 |
| NcoI | CCATGG | 2 cut(s) | 1743, 5833 |
| NdeI | CATATG | 1 cut(s) | 3486 |
| NmuCI | GTSAC | 9 cut(s) | 414, 455, 591, 1124, 1276, 2840, 3223, 3311, 3611 |
| NotI | GCGGCCGC | 1 cut(s) | 403 |
| NsiI | ATGCAT | 8 cut(s) | 858, 2652, 2988, 3031, 4864, 4885, 4930, 5031 |
| NspI | RCATGY | 9 cut(s) | 761, 989, 1132, 1391, 1609, 2650, 3224, 3388, 5102 |
| NspV | TTCGAA | 2 cut(s) | 343, 2077 |
| PaeI | GCATGC | 4 cut(s) | 1609, 2650, 3388, 5102 |
| PaeR7I | CTCGAG | 2 cut(s) | 3258, 5358 |
| PagI | TCATGA | 2 cut(s) | 3274, 3823 |
| PaqCI | CACCTGC | 2 cut(s) | 2401, 4705 |
| PasI | CCCWGGG | 1 cut(s) | 4726 |
| PceI | AGGCCT | 1 cut(s) | 5864 |
| PciI | ACATGT | 2 cut(s) | 1387, 3220 |
| PciSI | GCTCTTC | 1 cut(s) | 5527 |
| PctI | GAATGC | 2 cut(s) | 2167, 5896 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2497, 4355 |
| PflFI | GACNNNGTC | 2 cut(s) | 560, 3698 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 4290, 4697, 5794 |
| PfoI | TCCNGGA | 1 cut(s) | 2948 |
| PluTI | GGCGCC | 1 cut(s) | 4976 |
| Ppu21I | YACGTR | 2 cut(s) | 1118, 3092 |
| PscI | ACATGT | 2 cut(s) | 1387, 3220 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2403 |
| Psp124BI | GAGCTC | 2 cut(s) | 281, 4087 |
| PspEI | GGTNACC | 1 cut(s) | 1247 |
| PspFI | CCCAGC | 3 cut(s) | 167, 187, 3246 |
| PspXI | VCTCGAGB | 1 cut(s) | 5358 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2743, 2775 |
| PstI | CTGCAG | 5 cut(s) | 1347, 2398, 4153, 5512, 5579 |
| PstNI | CAGNNNCTG | 9 cut(s) | 728, 920, 1417, 2558, 3080, 3800, 4226, 4697, 5794 |
| PsuI | RGATCY | 8 cut(s) | 154, 680, 1376, 1616, 1846, 2273, 3602, 5791 |
| PsyI | GACNNNGTC | 2 cut(s) | 560, 3698 |
| PvuII | CAGCTG | 4 cut(s) | 171, 1204, 3661, 4781 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1160, 2508, 3531, 3912, 4260, 5103 |
| Rsr2I | CGGWCCG | 1 cut(s) | 196 |
| RsrII | CGGWCCG | 1 cut(s) | 196 |
| SacI | GAGCTC | 2 cut(s) | 281, 4087 |
| SapI | GCTCTTC | 1 cut(s) | 5527 |
| ScaI | AGTACT | 1 cut(s) | 5146 |
| SduI | GDGCHC | 6 cut(s) | 64, 281, 2002, 4087, 5359, 5845 |
| SexAI | ACCWGGT | 1 cut(s) | 1495 |
| SfcI | CTRYAG | 6 cut(s) | 1343, 2394, 3606, 4149, 5508, 5575 |
| SfoI | GGCGCC | 1 cut(s) | 4974 |
| Sfr274I | CTCGAG | 2 cut(s) | 3258, 5358 |
| SfuI | TTCGAA | 2 cut(s) | 343, 2077 |
| SlaI | CTCGAG | 2 cut(s) | 3258, 5358 |
| SmaI | CCCGGG | 1 cut(s) | 4340 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1160, 2508, 3531, 3912, 4260, 5103 |
| SpeI | ACTAGT | 1 cut(s) | 4091 |
| SphI | GCATGC | 4 cut(s) | 1609, 2650, 3388, 5102 |
| SseBI | AGGCCT | 1 cut(s) | 5864 |
| SspDI | GGCGCC | 1 cut(s) | 4972 |
| SspI | AATATT | 2 cut(s) | 4171, 5019 |
| SstI | GAGCTC | 2 cut(s) | 281, 4087 |
| StuI | AGGCCT | 1 cut(s) | 5864 |
| StyI | CCWWGG | 7 cut(s) | 1100, 1743, 1756, 3518, 5288, 5307, 5833 |
| TaaI | ACNGT | 9 cut(s) | 33, 420, 2402, 2483, 2840, 4062, 4950, 5242, 5630 |
| TaiI | ACGT | 6 cut(s) | 1120, 2304, 3094, 3413, 3569, 4244 |
| TaqI | TCGA | 8 cut(s) | 181, 246, 343, 1714, 2077, 3259, 4849, 5359 |
| TaqII | GACCGA | 3 cut(s) | 184, 1537, 1541 |
| TatI | WGTACW | 4 cut(s) | 1978, 4627, 4643, 5144 |
| TauI | GCSGC | 5 cut(s) | 177, 405, 408, 413, 5342 |
| TseFI | GTSAC | 9 cut(s) | 414, 455, 591, 1124, 1276, 2840, 3223, 3311, 3611 |
| Tsp45I | GTSAC | 9 cut(s) | 414, 455, 591, 1124, 1276, 2840, 3223, 3311, 3611 |
| TspGWI | ACGGA | 4 cut(s) | 384, 738, 2702, 3694 |
| TspMI | CCCGGG | 1 cut(s) | 4338 |
| Tth111I | GACNNNGTC | 2 cut(s) | 560, 3698 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 4290, 4697, 5794 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2349, 3424 |
| XbaI | TCTAGA | 5 cut(s) | 941, 1628, 2189, 5552, 5594 |
| XceI | RCATGY | 9 cut(s) | 761, 989, 1132, 1391, 1609, 2650, 3224, 3388, 5102 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 572, 674, 1921, 3044 |
| XhoI | CTCGAG | 2 cut(s) | 3258, 5358 |
| XmaI | CCCGGG | 1 cut(s) | 4338 |
| XmiI | GTMKAC | 4 cut(s) | 953, 1580, 3413, 3431 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2497, 4355 |
| ZrmI | AGTACT | 1 cut(s) | 5146 |
| Zsp2I | ATGCAT | 8 cut(s) | 858, 2652, 2988, 3031, 4864, 4885, 4930, 5031 |