Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001868

Physical Location & Seq

Genomic Coordinates Reverse (-)

3665327 .. 3674906

Gene Structure 9580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G004400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGATGCAGTCTTCACCAAGGCAGCAGCAACCACGTATTAGTGACATGCAGCTACAAAGACAGGCAATGTTCACACAAATGCAAGAATTTCAAAGGCAGCAACAACTAGAAAGGCAACAGCTGGTTTTGGCAAATCAAGCTTCCTCCATTGCAAAAGCTGCTGGTAACCACACACCAACCCAGATGAATGGCGTCACAATCAACGAGGCATCCAACAATCAATGGCCACCTAATGTTGTGGCAGGCAACACAAACTGGCTGCAGCGTGGAGCTTCCCCTGTTATGCAGGGGGGATCTAGTGGACATGTATTGTCCCATGAACAAGCCCAGGCACTGCGCTTGATGGGCATTGTCCCTCAACAGGCTGATCAATCTCTATATGGTGTTCCAATTTCTAGCTCAAGTGGAACACCAGGTTCATATCCTCATTTTCAAATGGATAAACCGGCAATGCAGCAGATATCGGTCGGTCGTAATTCATTTCCAGGTAATCAGTATACTGCATTTTCAGGTCCAGTTAGCATGCAAGAGGGATCTCTGGCTTCTAGACAGGATTTTCAAGGGAAAAGTATGGTTGGGCCTACTGCTGCTCAAAGTTTGAGCAGTGGGTTTAATTTGGAAACATTGCATCGAGTAAATCCCCAACAAAGAAATGAACCCATGGAGGAATTCCAAGGGAGGCAAGAGCTAGTTGGATTGTTAGAACCATCACCGGAGAAAGCAGTTGGGCAGGTTGCACCCTCACAGGGTGTGGCTACCCTAGATCCAACTGAAGAAAAGATTTTGTTTGGTTCAGATGATAATCTTTGGGATGCTTTTGGGAGGAGCGCCAATGTGGGAATGGGAGGTTCTAGTATGCTGGATGGTGCAGATATTTTTGGTGGACTTTCTTCTGTACAAAGTGGAACTTGGAGTGCTCTTATGCAGTCTGCTGTTGCAGAAACTTCTAGTGTTGATGGAGGGATACAGGAAGAGTGGTGTGGTCCTAGTTTTCGAAATCCAGAACCTCCAGTTGGGACTCAGCAGCCCTCAAGTGTCAGTGATACTAACAAACAACAATCTGGTTGGGCTGGTAACAACTTGCATTCATCGTCTGACTTGAATTCTAGACCCTCCTCACAATTTGCTGATGCCAATAGGCCCAGTATCAGTGGTAGTTTTTCTAGTATTCAGGGATTTCAGCAATCAGGATCTAAAACTTTGCATGAAAGAGGAGACGTTTTTCAGACTGATTCTTCTCACAGGTTTATTTCACAGAGTCCTGAACAAGGAAGTAAATGGTTGGATCACAACCCTCCACCACAGCCACCTGCAGACGGTAGTCATAACAACTATGGAACCATTAGTCATTCGTCAGGTAGAGAGATAAATGCAAATAGCATTTCAGGTTCTTGGAACCGTCAAGAAAGAAGTTCTTCGCATAGTAATGATAACCAGCCAAACAATATGTCAAATGGGTGGAATTTTACTGAATCTGTGTCAACAGATGGGGGTAATAATCTGAAAAATCATGGGAATCAAATCTTATCACGATCCGCTGAAGGTGGTGATCTGAAGAGAGGCATGCATGAGGAAATAAGCCGTGCTGCTGGTATGTGGAAGACGGATTTTGCTCCAAACTCAAATTTTGAAGTGGCACATCCAAAATATGCAAGCCCGCAAATCAGTAGAGAGGGTTCAAGTATAAACAACGCTCCTAAATCAAATTCCAGCGCTGAAAGAGCCTACCAAGAAGGCCAGCAACATCTTGCAAACAGTCACGATTTCTGGACACCTGTTGATTCTTTAGTGAACTCTAAAGGAGGAGAGGCTCTGGGAAAAAATCAGCATCATCTGGACAAGAACCACCTGATTTTGGAGTCATCCGGGAACAATTGTTTAGACAAAGGAGTAGTTGAAATGCATGATATGGAGAACAACAATACAAAAGAGAATTACCATAATGCATATCACCATGCTTCCACTGGGGGTATGAAGGAAAATGTCGTCTCAGATGCTGGCGATTCACGTACTTTACCTGGAAGCAAACAACACTCATCTGGCAATGCTGGTCGCAAGCCCTCTGCAACTCGCAAGTTTCAGTATCATCCAATGGGGGATGTTGGTGTTAAAGTGGAACCTTCATCTGGAAGAAAACACGTGACACATTCACAGGCTATGACCCAGCAGGTCTCTCGAGGATTCAAAAGTCATGAACAAGGGAGTTTTGGGCAGTCAAAATTTATGGGTCACACTGATAGAAGTTCTATGGAAATTGAAAAGGTTAACATAAGAGGTTCGGATGAGCCACCTTCAAAAAGCATGCTTCCAGGTTATGCCCCAAGTACGTCTACTCCCTTTGACAGGTCTACTGGTAATAATAACAACACCTCAAAAAAGGCTGCACCACCATCAAGTCAACATATGCTTGAGCTTCTTCACAAGGTGGACCAACCAAGGGAGCATGGTAATGCTACTCACTTCAGCCCTTCTGATCACAACACGTCATCTGAGATGCCTGAAGTGGAAACTTCTGATGGATCTGTAGGTCACATTCAGAGAAATCAATCATCTGTCTCTCAAGGTTTTGGTTTACAGCTGGCTCCTCCATCTCAACGGATTCCACTTGCAGACCATGCCCTGTCTTCTCAGAGTTCCTCACAAGCAGTTCTGGGTTCAGGTCGTGTCCATTCTGAGATGGGAGAAAAAGGTCGTACATGGTTGGCCTCAACAGCATCTGTTCAGTCCTTGCCATCCTCTCACGAAGCATCTCAAGGGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

920

Amino Acids

99.17

Weight (kDa)

6.23

Isoelectric Point (pI)

53.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001868)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07940 AT5G07940 AT5G07940 AT5G07940 AT5G07940 AT5G07970 AT5G07970 AT5G07970 AT5G07980 AT5G07980
fragaria_vesca	FvH4_5g14040 FvH4_5g14040 FvH4_5g14040 FvH4_5g14040 FvH4_5g14040
malus_domestica	MD06G1200700.v1.1 MD14G1210400.v1.1
prunus_persica	Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1 Prupe.5G203400_v2.0.a1
pyrus_communis	pycom06g17720 pycom14g17370
rosa_chinensis	RchiOBHm_Chr7g0182781
rosa_laevigata	RLG00000005100
rosa_multiflora	Rmu_sc0000014.1_g000028
rosa_roxburghii	Rroxscaffold_3G00270980
rosa_rugosa	Rorug06G0450400 Rorug06G0450500 Rorug06G0450600 Rorug06G0450700
rosa_samantha	Rh7AG054000 Rh7BG053500 Rh7CG055100 Rh7DG053300
rosa_wichuraiana	Rw7G004400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1318
Acc36I	ACCTGC	3 cut(s)	721, 1318, 2158
AccI	GTMKAC	3 cut(s)	497, 2330, 2348
AciI	CCGC	2 cut(s)	1536, 1658
AclWI	GGATC	7 cut(s)	301, 541, 758, 1198, 1293, 1527, 2527
AcoI	YGGCCR	1 cut(s)	224
AcsI	RAATTY	7 cut(s)	86, 668, 1102, 1462, 1624, 1705, 2219
AcuI	CTGAAG	5 cut(s)	792, 1560, 1574, 2446, 2520
AcvI	CACGTG	1 cut(s)	2140
AcyI	GRCGYC	1 cut(s)	192
AdeI	CACNNNGTG	2 cut(s)	749, 2425
AfaI	GTAC	4 cut(s)	897, 2011, 2326, 2695
AfeI	AGCGCT	1 cut(s)	1714
AfiI	CCNNNNNNNGG	9 cut(s)	361, 746, 1013, 1268, 1316, 1855, 2126, 2343, 2437
AflIII	ACRYGT	3 cut(s)	304, 2137, 2481
AjiI	CACGTC	1 cut(s)	2484
AjnI	CCWGG	5 cut(s)	327, 412, 484, 2017, 2308
AjuI	GAANNNNNNNTTGG	2 cut(s)	996, 1028
AluBI	AGCT	9 cut(s)	52, 121, 140, 158, 272, 399, 688, 2413, 2578
AluI	AGCT	9 cut(s)	52, 121, 140, 158, 272, 399, 688, 2413, 2578
Alw21I	GWGCWC	1 cut(s)	919
Alw26I	GTCTC	4 cut(s)	1209, 1993, 2176, 2560
AlwI	GGATC	7 cut(s)	301, 541, 758, 1198, 1293, 1527, 2527
AlwNI	CAGNNNCTG	3 cut(s)	334, 1997, 2717
Ama87I	CYCGRG	1 cut(s)	2175
Aor51HI	AGCGCT	1 cut(s)	1714
AoxI	GGCC	5 cut(s)	224, 578, 1139, 1735, 2703
ApoI	RAATTY	7 cut(s)	86, 668, 1102, 1462, 1624, 1705, 2219
ArsI	GACNNNNNNTTYG	2 cut(s)	1433, 1465
Asp700I	GAANNNNTTC	1 cut(s)	1414
AspLEI	GCGC	3 cut(s)	339, 830, 1715
AspS9I	GGNCC	5 cut(s)	512, 578, 983, 1140, 2428
AsuC2I	CCSGG	1 cut(s)	1867
AsuHPI	GGTGA	4 cut(s)	6, 702, 1559, 1943
AsuII	TTCGAA	1 cut(s)	994
AvaI	CYCGRG	1 cut(s)	2175
AvaII	GGWCC	3 cut(s)	512, 983, 2428
BalI	TGGCCA	1 cut(s)	226
BbrPI	CACGTG	1 cut(s)	2140
BbsI	GAAGAC	3 cut(s)	3, 1607, 2616
Bbv12I	GWGCWC	1 cut(s)	919
BceAI	ACGGC	1 cut(s)	1566
BcgI	CGANNNNNNTGC	2 cut(s)	2156, 2190
BciT130I	CCWGG	5 cut(s)	329, 414, 486, 2019, 2310
BciVI	GTATCC	1 cut(s)	957
BclI	TGATCA	2 cut(s)	367, 2473
BcnI	CCSGG	1 cut(s)	1867
BcoDI	GTCTC	4 cut(s)	1209, 1993, 2176, 2560
BfmI	CTRYAG	3 cut(s)	260, 1311, 2523
BfoI	RGCGCY	2 cut(s)	831, 1716
BfuAI	ACCTGC	3 cut(s)	721, 1318, 2158
BfuI	GTATCC	1 cut(s)	957
Bme1390I	CCNGG	6 cut(s)	329, 414, 486, 1867, 2019, 2310
Bme18I	GGWCC	3 cut(s)	512, 983, 2428
BmeT110I	CYCGRG	1 cut(s)	2175
BmgBI	CACGTC	1 cut(s)	2484
BmgT120I	GGNCC	5 cut(s)	512, 578, 983, 1140, 2428
BmiI	GGNNCC	4 cut(s)	1339, 1397, 2118, 2583
BmrFI	CCNGG	6 cut(s)	329, 414, 486, 1867, 2019, 2310
BmrI	ACTGGG	2 cut(s)	1137, 1974
BmsI	GCATC	9 cut(s)	218, 637, 802, 1120, 1837, 1984, 2484, 2723, 2756
BmuI	ACTGGG	2 cut(s)	1137, 1974
BoxI	GACNNNNGTC	1 cut(s)	1320
BpiI	GAAGAC	3 cut(s)	3, 1607, 2616
BpmI	CTGGAG	1 cut(s)	993
Bpu14I	TTCGAA	1 cut(s)	994
BpuEI	CTTGAG	5 cut(s)	385, 1015, 2429, 2544, 2736
BpuMI	CCSGG	1 cut(s)	1867
BsaAI	YACGTR	3 cut(s)	35, 2009, 2140
BsaBI	GATNNNNATC	1 cut(s)	801
BsaHI	GRCGYC	1 cut(s)	192
BsaI	GGTCTC	1 cut(s)	2176
BsaJI	CCNNGG	5 cut(s)	17, 327, 660, 673, 2435
BsaWI	WCCGGW	1 cut(s)	712
BsaXI	ACNNNNNCTCC	2 cut(s)	2317, 2347
Bsc4I	CCNNNNNNNGG	9 cut(s)	361, 746, 1013, 1268, 1316, 1855, 2126, 2343, 2437
Bse118I	RCCGGY	1 cut(s)	445
Bse1I	ACTGG	6 cut(s)	260, 515, 1010, 1143, 1969, 2356
Bse3DI	GCAATG	5 cut(s)	72, 147, 456, 623, 2050
Bse8I	GATNNNNATC	1 cut(s)	801
BseBI	CCWGG	5 cut(s)	329, 414, 486, 2019, 2310
BseDI	CCNNGG	5 cut(s)	17, 327, 660, 673, 2435
BseGI	GGATG	9 cut(s)	209, 817, 868, 1639, 1862, 2086, 2104, 2287, 2732
BseJI	GATNNNNATC	1 cut(s)	801
BseLI	CCNNNNNNNGG	9 cut(s)	361, 746, 1013, 1268, 1316, 1855, 2126, 2343, 2437
BseMI	GCAATG	5 cut(s)	72, 147, 456, 623, 2050
BseMII	CTCAG	5 cut(s)	1034, 2004, 2481, 2642, 2664
BseNI	ACTGG	6 cut(s)	260, 515, 1010, 1143, 1969, 2356
BseRI	GAGGAG	5 cut(s)	838, 1105, 1227, 1818, 2574
BseYI	CCCAGC	1 cut(s)	2163
BsgI	GTGCAG	2 cut(s)	888, 2367
Bsh1285I	CGRYCG	2 cut(s)	468, 472
BshFI	GGCC	5 cut(s)	226, 580, 1141, 1737, 2705
BsiEI	CGRYCG	2 cut(s)	468, 472
BsiHKAI	GWGCWC	1 cut(s)	919
BsiHKCI	CYCGRG	1 cut(s)	2175
BsiSI	CCGG	3 cut(s)	446, 713, 1866
BslFI	GGGAC	3 cut(s)	298, 338, 1030
BslI	CCNNNNNNNGG	9 cut(s)	361, 746, 1013, 1268, 1316, 1855, 2126, 2343, 2437
BsmAI	GTCTC	4 cut(s)	1209, 1993, 2176, 2560
BsmBI	CGTCTC	2 cut(s)	1209, 1993
BsmFI	GGGAC	3 cut(s)	298, 338, 1030
BsmI	GAATGC	1 cut(s)	1084
BsnI	GGCC	5 cut(s)	226, 580, 1141, 1737, 2705
Bso31I	GGTCTC	1 cut(s)	2176
BsoBI	CYCGRG	1 cut(s)	2175
Bsp119I	TTCGAA	1 cut(s)	994
Bsp1286I	GDGCHC	1 cut(s)	919
Bsp1407I	TGTACA	1 cut(s)	895
Bsp19I	CCATGG	1 cut(s)	660
BspACI	CCGC	2 cut(s)	1536, 1658
BspANI	GGCC	5 cut(s)	226, 580, 1141, 1737, 2705
BspCNI	CTCAG	5 cut(s)	1033, 2003, 2482, 2641, 2665
BspHI	TCATGA	1 cut(s)	2191
BspLI	GGNNCC	4 cut(s)	1339, 1397, 2118, 2583
BspMAI	CTGCAG	2 cut(s)	264, 1315
BspMI	ACCTGC	3 cut(s)	721, 1318, 2158
BspPI	GGATC	7 cut(s)	301, 541, 758, 1198, 1293, 1527, 2527
BspT104I	TTCGAA	1 cut(s)	994
BspTNI	GGTCTC	1 cut(s)	2176
BsrDI	GCAATG	5 cut(s)	72, 147, 456, 623, 2050
BsrFI	RCCGGY	1 cut(s)	445
BsrGI	TGTACA	1 cut(s)	895
BsrI	ACTGG	6 cut(s)	260, 515, 1010, 1143, 1969, 2356
BssAI	RCCGGY	1 cut(s)	445
BssECI	CCNNGG	5 cut(s)	17, 327, 660, 673, 2435
BssNAI	GTATAC	1 cut(s)	498
BssNI	GRCGYC	1 cut(s)	192
BssT1I	CCWWGG	4 cut(s)	17, 660, 673, 2435
Bst1107I	GTATAC	1 cut(s)	498
Bst2UI	CCWGG	5 cut(s)	329, 414, 486, 2019, 2310
Bst4CI	ACNGT	3 cut(s)	1319, 1400, 1757
Bst6I	CTCTTC	2 cut(s)	966, 1550
BstACI	GRCGYC	1 cut(s)	192
BstAPI	GCANNNNNTGC	2 cut(s)	158, 2615
BstAUI	TGTACA	1 cut(s)	895
BstBAI	YACGTR	3 cut(s)	35, 2009, 2140
BstBI	TTCGAA	1 cut(s)	994
BstDEI	CTNAG	5 cut(s)	1020, 1990, 2490, 2628, 2673
BstDSI	CCRYGG	1 cut(s)	660
BstEII	GGTNACC	1 cut(s)	164
BstENI	CCTNNNNNAGG	2 cut(s)	1266, 2341
BstF5I	GGATG	9 cut(s)	209, 817, 868, 1639, 1862, 2086, 2104, 2287, 2732
BstH2I	RGCGCY	2 cut(s)	831, 1716
BstHHI	GCGC	3 cut(s)	339, 830, 1715
BstMAI	GTCTC	4 cut(s)	1209, 1993, 2176, 2560
BstMCI	CGRYCG	2 cut(s)	468, 472
BstMWI	GCNNNNNNNGC	6 cut(s)	137, 158, 345, 1721, 2615, 2711
BstNI	CCWGG	5 cut(s)	329, 414, 486, 2019, 2310
BstNSI	RCATGY	5 cut(s)	49, 308, 526, 1567, 2305
BstPAI	GACNNNNGTC	1 cut(s)	1320
BstPI	GGTNACC	1 cut(s)	164
BstSCI	CCNGG	6 cut(s)	327, 412, 484, 1865, 2017, 2308
BstSFI	CTRYAG	3 cut(s)	260, 1311, 2523
BstV2I	GAAGAC	3 cut(s)	3, 1607, 2616
BstX2I	RGATCY	5 cut(s)	293, 533, 763, 1190, 2519
BstXI	CCANNNNNNTGG	1 cut(s)	188
BstYI	RGATCY	5 cut(s)	293, 533, 763, 1190, 2519
BstZ17I	GTATAC	1 cut(s)	498
BsuI	GTATCC	1 cut(s)	957
BsuRI	GGCC	5 cut(s)	226, 580, 1141, 1737, 2705
BtgI	CCRYGG	1 cut(s)	660
BtrI	CACGTC	1 cut(s)	2484
BtsCI	GGATG	9 cut(s)	209, 817, 868, 1639, 1862, 2086, 2104, 2287, 2732
BtsI	GCAGTG	2 cut(s)	332, 610
BtsIMutI	CAGTG	6 cut(s)	332, 610, 1045, 1156, 1962, 2232
BveI	ACCTGC	3 cut(s)	721, 1318, 2158
CaiI	CAGNNNCTG	3 cut(s)	334, 1997, 2717
CciI	TCATGA	1 cut(s)	2191
CfoI	GCGC	3 cut(s)	339, 830, 1715
Cfr10I	RCCGGY	1 cut(s)	445
Cfr13I	GGNCC	5 cut(s)	512, 578, 983, 1140, 2428
CseI	GACGC	1 cut(s)	181
CsiI	ACCWGGT	1 cut(s)	412
Csp6I	GTAC	4 cut(s)	896, 2010, 2325, 2694
CviQI	GTAC	4 cut(s)	896, 2010, 2325, 2694
DdeI	CTNAG	5 cut(s)	1020, 1990, 2490, 2628, 2673
DraIII	CACNNNGTG	2 cut(s)	749, 2425
EaeI	YGGCCR	1 cut(s)	224
Eam1104I	CTCTTC	2 cut(s)	966, 1550
EarI	CTCTTC	2 cut(s)	966, 1550
Eco130I	CCWWGG	4 cut(s)	17, 660, 673, 2435
Eco31I	GGTCTC	1 cut(s)	2176
Eco32I	GATATC	1 cut(s)	462
Eco47I	GGWCC	3 cut(s)	512, 983, 2428
Eco47III	AGCGCT	1 cut(s)	1714
Eco57I	CTGAAG	5 cut(s)	792, 1560, 1574, 2446, 2520
Eco72I	CACGTG	1 cut(s)	2140
Eco88I	CYCGRG	1 cut(s)	2175
Eco91I	GGTNACC	1 cut(s)	164
EcoNI	CCTNNNNNAGG	2 cut(s)	1266, 2341
EcoO65I	GGTNACC	1 cut(s)	164
EcoRI	GAATTC	2 cut(s)	668, 1102
EcoRII	CCWGG	5 cut(s)	327, 412, 484, 2017, 2308
EcoRV	GATATC	1 cut(s)	462
EcoT14I	CCWWGG	4 cut(s)	17, 660, 673, 2435
EcoT22I	ATGCAT	3 cut(s)	1569, 1905, 1948
ErhI	CCWWGG	4 cut(s)	17, 660, 673, 2435
Esp3I	CGTCTC	2 cut(s)	1209, 1993
FalI	AAGNNNNNCTT	4 cut(s)	892, 924, 1399, 1431
FaqI	GGGAC	3 cut(s)	298, 338, 1030
FauI	CCCGC	1 cut(s)	1665
FauNDI	CATATG	1 cut(s)	2403
FbaI	TGATCA	2 cut(s)	367, 2473
FblI	GTMKAC	3 cut(s)	497, 2330, 2348
FokI	GGATG	9 cut(s)	196, 824, 875, 1626, 1849, 2073, 2111, 2294, 2719
GlaI	GCGC	3 cut(s)	338, 829, 1714
GsaI	CCCAGC	1 cut(s)	2167
GsuI	CTGGAG	1 cut(s)	993
HaeII	RGCGCY	2 cut(s)	831, 1716
HaeIII	GGCC	5 cut(s)	226, 580, 1141, 1737, 2705
HapII	CCGG	3 cut(s)	446, 713, 1866
HgaI	GACGC	1 cut(s)	181
HhaI	GCGC	3 cut(s)	339, 830, 1715
Hin1I	GRCGYC	1 cut(s)	192
Hin6I	GCGC	3 cut(s)	337, 828, 1713
HinP1I	GCGC	3 cut(s)	337, 828, 1713
HincII	GTYRAC	3 cut(s)	1482, 2266, 2399
HindII	GTYRAC	3 cut(s)	1482, 2266, 2399
HindIII	AAGCTT	1 cut(s)	138
HpaI	GTTAAC	1 cut(s)	2266
HpaII	CCGG	3 cut(s)	446, 713, 1866
HphI	GGTGA	4 cut(s)	6, 702, 1559, 1943
HpyAV	CCTTC	6 cut(s)	1535, 1727, 1969, 2130, 2301, 2478
HpyCH4III	ACNGT	3 cut(s)	1319, 1400, 1757
HpyCH4IV	ACGT	6 cut(s)	34, 1218, 2008, 2139, 2327, 2483
HpyF10VI	GCNNNNNNNGC	6 cut(s)	137, 158, 345, 1721, 2615, 2711
HpyF3I	CTNAG	5 cut(s)	1020, 1990, 2490, 2628, 2673
HpySE526I	ACGT	6 cut(s)	34, 1218, 2008, 2139, 2327, 2483
Hsp92I	GRCGYC	1 cut(s)	192
HspAI	GCGC	3 cut(s)	337, 828, 1713
Ksp22I	TGATCA	2 cut(s)	367, 2473
KspAI	GTTAAC	1 cut(s)	2266
LmnI	GCTCC	6 cut(s)	269, 825, 1618, 1699, 2440, 2587
LweI	GCATC	9 cut(s)	218, 637, 802, 1120, 1837, 1984, 2484, 2723, 2756
MabI	ACCWGGT	1 cut(s)	412
MaeII	ACGT	6 cut(s)	34, 1218, 2008, 2139, 2327, 2483
MaeIII	GTNAC	8 cut(s)	41, 164, 193, 1073, 1757, 2140, 2228, 2528
MfeI	CAATTG	1 cut(s)	1873
MflI	RGATCY	5 cut(s)	293, 533, 763, 1190, 2519
MhlI	GDGCHC	1 cut(s)	919
MlsI	TGGCCA	1 cut(s)	226
MluNI	TGGCCA	1 cut(s)	226
MlyI	GAGTC	3 cut(s)	1012, 1267, 1868
MmeI	TCCRAC	4 cut(s)	237, 673, 791, 1263
Mox20I	TGGCCA	1 cut(s)	226
Mph1103I	ATGCAT	3 cut(s)	1569, 1905, 1948
MroXI	GAANNNNTTC	1 cut(s)	1414
MscI	TGGCCA	1 cut(s)	226
MseI	TTAA	4 cut(s)	612, 2109, 2265, 2761
MslI	CAYNNNNRTG	3 cut(s)	77, 1425, 2448
Msp20I	TGGCCA	1 cut(s)	226
MspA1I	CMGCKG	3 cut(s)	121, 1538, 2578
MspI	CCGG	3 cut(s)	446, 713, 1866
MspR9I	CCNGG	6 cut(s)	329, 414, 486, 1867, 2019, 2310
MunI	CAATTG	1 cut(s)	1873
Mva1269I	GAATGC	1 cut(s)	1084
MvaI	CCWGG	5 cut(s)	329, 414, 486, 2019, 2310
MwoI	GCNNNNNNNGC	6 cut(s)	137, 158, 345, 1721, 2615, 2711
NciI	CCSGG	1 cut(s)	1867
NcoI	CCATGG	1 cut(s)	660
NdeI	CATATG	1 cut(s)	2403
NlaIV	GGNNCC	4 cut(s)	1339, 1397, 2118, 2583
NmuCI	GTSAC	6 cut(s)	41, 193, 1757, 2140, 2228, 2528
NsiI	ATGCAT	3 cut(s)	1569, 1905, 1948
NspI	RCATGY	5 cut(s)	49, 308, 526, 1567, 2305
NspV	TTCGAA	1 cut(s)	994
PaeI	GCATGC	3 cut(s)	526, 1567, 2305
PaeR7I	CTCGAG	1 cut(s)	2175
PagI	TCATGA	1 cut(s)	2191
PaqCI	CACCTGC	1 cut(s)	1318
PciI	ACATGT	1 cut(s)	304
PctI	GAATGC	1 cut(s)	1084
PdmI	GAANNNNTTC	1 cut(s)	1414
PfeI	GAWTC	7 cut(s)	1232, 1472, 1516, 1781, 2003, 2181, 2599
PfoI	TCCNGGA	1 cut(s)	1865
PleI	GAGTC	3 cut(s)	1012, 1266, 1867
PmaCI	CACGTG	1 cut(s)	2140
PmlI	CACGTG	1 cut(s)	2140
PpsI	GAGTC	3 cut(s)	1012, 1266, 1867
Ppu21I	YACGTR	3 cut(s)	35, 2009, 2140
PscI	ACATGT	1 cut(s)	304
PshAI	GACNNNNGTC	1 cut(s)	1320
Psp6I	CCWGG	5 cut(s)	327, 412, 484, 2017, 2308
PspCI	CACGTG	1 cut(s)	2140
PspEI	GGTNACC	1 cut(s)	164
PspFI	CCCAGC	1 cut(s)	2163
PspGI	CCWGG	5 cut(s)	327, 412, 484, 2017, 2308
PspN4I	GGNNCC	4 cut(s)	1339, 1397, 2118, 2583
PspPI	GGNCC	5 cut(s)	512, 578, 983, 1140, 2428
PsrI	GAACNNNNNNTAC	2 cut(s)	1660, 1692
PstI	CTGCAG	2 cut(s)	264, 1315
PstNI	CAGNNNCTG	3 cut(s)	334, 1997, 2717
PsuI	RGATCY	5 cut(s)	293, 533, 763, 1190, 2519
PvuII	CAGCTG	2 cut(s)	121, 2578
RsaI	GTAC	4 cut(s)	897, 2011, 2326, 2695
RsaNI	GTAC	4 cut(s)	896, 2010, 2325, 2694
RseI	CAYNNNNRTG	3 cut(s)	77, 1425, 2448
SaqAI	TTAA	4 cut(s)	612, 2109, 2265, 2761
Sau96I	GGNCC	5 cut(s)	512, 578, 983, 1140, 2428
SchI	GAGTC	3 cut(s)	1012, 1267, 1868
ScrFI	CCNGG	6 cut(s)	329, 414, 486, 1867, 2019, 2310
SduI	GDGCHC	1 cut(s)	919
SexAI	ACCWGGT	1 cut(s)	412
SfaNI	GCATC	9 cut(s)	218, 637, 802, 1120, 1837, 1984, 2484, 2723, 2756
SfcI	CTRYAG	3 cut(s)	260, 1311, 2523
Sfr274I	CTCGAG	1 cut(s)	2175
SfuI	TTCGAA	1 cut(s)	994
SinI	GGWCC	3 cut(s)	512, 983, 2428
SlaI	CTCGAG	1 cut(s)	2175
SmiMI	CAYNNNNRTG	3 cut(s)	77, 1425, 2448
SmlI	CTYRAG	6 cut(s)	400, 1030, 2175, 2408, 2559, 2751
SmoI	CTYRAG	6 cut(s)	400, 1030, 2175, 2408, 2559, 2751
SphI	GCATGC	3 cut(s)	526, 1567, 2305
SsiI	CCGC	2 cut(s)	1536, 1658
StyD4I	CCNGG	6 cut(s)	327, 412, 484, 1865, 2017, 2308
StyI	CCWWGG	4 cut(s)	17, 660, 673, 2435
TaaI	ACNGT	3 cut(s)	1319, 1400, 1757
TaiI	ACGT	6 cut(s)	37, 1221, 2011, 2142, 2330, 2486
TaqI	TCGA	3 cut(s)	631, 994, 2176
TaqII	GACCGA	2 cut(s)	454, 458
TatI	WGTACW	1 cut(s)	895
TfiI	GAWTC	7 cut(s)	1232, 1472, 1516, 1781, 2003, 2181, 2599
Tru1I	TTAA	4 cut(s)	612, 2109, 2265, 2761
Tru9I	TTAA	4 cut(s)	612, 2109, 2265, 2761
TscAI	CASTG	6 cut(s)	339, 610, 1045, 1156, 1969, 2239
TseFI	GTSAC	6 cut(s)	41, 193, 1757, 2140, 2228, 2528
Tsp45I	GTSAC	6 cut(s)	41, 193, 1757, 2140, 2228, 2528
TspGWI	ACGGA	2 cut(s)	1619, 2611
TspRI	CASTG	6 cut(s)	339, 610, 1045, 1156, 1969, 2239
VpaK11BI	GGWCC	3 cut(s)	512, 983, 2428
XagI	CCTNNNNNAGG	2 cut(s)	1266, 2341
XapI	RAATTY	7 cut(s)	86, 668, 1102, 1462, 1624, 1705, 2219
XbaI	TCTAGA	2 cut(s)	545, 1106
XceI	RCATGY	5 cut(s)	49, 308, 526, 1567, 2305
XcmI	CCANNNNNNNNNTGG	2 cut(s)	838, 1961
XhoI	CTCGAG	1 cut(s)	2175
XmiI	GTMKAC	3 cut(s)	497, 2330, 2348
XmnI	GAANNNNTTC	1 cut(s)	1414
Zsp2I	ATGCAT	3 cut(s)	1569, 1905, 1948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.