AT5G09220

Amino acid permease

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
2866222 .. 2869156
2935 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G09220.1

Sequence Viewer

Length: 1482 bp
ATGGGTGAAACCGCTGCCGCCAATAACCACCGTCACCACCACCATCACGGCCACCAGGTCTTTGACGTGGCCAGCCACGATTTCGTCCCTCCACAACCGGCTTTTAAATGCTTCGATGATGATGGCCGCCTCAAAAGAACTGGGACTGTTTGGACCGCGAGCGCTCATATAATAACTGCGGTTATCGGATCCGGCGTTTTGTCATTGGCGTGGGCGATTGCACAGCTCGGATGGATCGCTGGCCCTGCTGTGATGCTATTGTTCTCTCTTGTTACTCTTTACTCCTCCACACTTCTTAGCGACTGCTACAGAACCGGCGATGCAGTGTCTGGCAAGAGAAACTACACTTACATGGATGCCGTTCGATCAATTCTCGGTGGGTTCAAGTTCAAGATTTGTGGGTTGATTCAATACTTGAATCTCTTTGGTATCGCAATTGGATACACGATAGCAGCTTCCATAAGCATGATGGCGATCAAGAGATCCAACTGCTTCCACAAGAGTGGAGGAAAAGACCCATGTCACATGTCCAGTAATCCTTACATGATCGTATTTGGTGTGGCAGAGATCTTGCTCTCTCAGGTTCCTGATTTCGATCAGATTTGGTGGATCTCCATTGTTGCAGCTGTTATGTCCTTCACTTACTCTGCCATTGGTCTAGCTCTTGGAATCGTTCAAGTTGCAGCGAATGGAGTTTTCAAAGGAAGTCTCACTGGAATAAGCATCGGAACAGTGACTCAAACACAGAAGATATGGAGAACCTTCCAAGCACTTGGAGACATTGCCTTTGCGTACTCATACTCTGTTGTCCTAATCGAGATTCAGGATACTGTAAGATCCCCACCGGCGGAATCGAAAACGATGAAGAAAGCAACAAAAATCAGTATTGCCGTCACAACTATCTTCTACATGCTATGTGGCTCAATGGGTTATGCCGCTTTTGGAGATGCAGCACCGGGAAACCTCCTCACCGGTTTTGGATTCTACAACCCGTTTTGGCTCCTTGACATAGCTAACGCCGCCATTGTTGTCCACCTCGTTGGAGCTTACCAAGTCTTTGCTCAGCCCATCTTTGCCTTTATTGAAAAATCAGTCGCAGAGAGATATCCAGACAATGACTTCCTCAGCAAGGAATTTGAAATCAGAATCCCCGGATTTAAGTCTCCTTACAAAGTAAACGTTTTCAGGATGGTTTACAGGAGTGGCTTTGTCGTTACAACCACCGTGATATCGATGCTGATGCCGTTTTTTAACGACGTGGTCGGGATCTTAGGGGCGTTAGGGTTTTGGCCCTTGACGGTTTATTTTCCGGTGGAGATGTATATTAAGCAGAGGAAGGTTGAGAAATGGAGCACGAGATGGGTGTGTTTACAGATGCTTAGTGTTGCTTGTCTTGTGATCTCGGTGGTCGCCGGGGTTGGATCAATCGCCGGAGTGATGCTTGATCTTAAGGTCTATAAGCCATTCAAGTCTACATATTGA

Protein Analysis

493

Amino Acids

54.15

Weight (kDa)

9.07

Isoelectric Point (pI)

31.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 46 - 480 2.6e-129 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014916)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1472
AccII CGCG 1 cut(s) 158
AciI CCGC 8 cut(s) 12, 18, 127, 156, 179, 848, 936, 1020
AclI AACGTT 1 cut(s) 1179
AclWI GGATC 8 cut(s) 183, 196, 242, 477, 617, 831, 1274, 1429
AcoI YGGCCR 3 cut(s) 49, 69, 124
AcsI RAATTY 1 cut(s) 1133
AfaI GTAC 1 cut(s) 794
AfeI AGCGCT 1 cut(s) 163
AfiI CCNNNNNNNGG 2 cut(s) 847, 1129
AflII CTTAAG 1 cut(s) 1448
AflIII ACRYGT 1 cut(s) 525
AgeI ACCGGT 1 cut(s) 971
AgsI TTSAA 9 cut(s) 385, 391, 410, 418, 677, 700, 1085, 1139, 1468
AjiI CACGTC 2 cut(s) 67, 1258
AjnI CCWGG 1 cut(s) 54
AleI CACNNNNGTG 1 cut(s) 501
AluBI AGCT 6 cut(s) 226, 455, 626, 662, 1013, 1046
AluI AGCT 6 cut(s) 226, 455, 626, 662, 1013, 1046
Alw21I GWGCWC 1 cut(s) 1355
Alw26I GTCTC 3 cut(s) 713, 771, 1167
AlwI GGATC 8 cut(s) 183, 196, 242, 477, 617, 831, 1274, 1429
AlwNI CAGNNNCTG 1 cut(s) 329
Aor51HI AGCGCT 1 cut(s) 163
AoxI GGCC 5 cut(s) 49, 69, 124, 241, 1289
ApeKI GCWGC 5 cut(s) 14, 452, 623, 683, 950
ApoI RAATTY 1 cut(s) 1133
ArsI GACNNNNNNTTYG 2 cut(s) 770, 802
AsiGI ACCGGT 1 cut(s) 971
AspLEI GCGC 1 cut(s) 164
AspS9I GGNCC 3 cut(s) 153, 242, 1290
AsuC2I CCSGG 3 cut(s) 957, 1152, 1414
AsuHPI GGTGA 3 cut(s) 17, 26, 961
AvaII GGWCC 1 cut(s) 153
BalI TGGCCA 1 cut(s) 71
BamHI GGATCC 1 cut(s) 188
BauI CACGAG 1 cut(s) 1354
Bbv12I GWGCWC 1 cut(s) 1355
BbvCI CCTCAGC 1 cut(s) 1124
BbvI GCAGC 4 cut(s) 464, 635, 695, 962
BccI CCATC 7 cut(s) 51, 116, 225, 463, 1076, 1183, 1353
BceAI ACGGC 4 cut(s) 64, 344, 875, 1228
BcgI CGANNNNNNTGC 2 cut(s) 1222, 1256
BciT130I CCWGG 1 cut(s) 56
BciVI GTATCC 2 cut(s) 434, 820
BcnI CCSGG 3 cut(s) 957, 1152, 1414
BcoDI GTCTC 3 cut(s) 713, 771, 1167
BfaI CTAG 1 cut(s) 659
BfmI CTRYAG 1 cut(s) 307
BfoI RGCGCY 1 cut(s) 165
BfrI CTTAAG 1 cut(s) 1448
BfuI GTATCC 2 cut(s) 434, 820
BglII AGATCT 1 cut(s) 567
BisI GCNGC 9 cut(s) 15, 18, 127, 453, 624, 684, 936, 951, 1020
BlpI GCTNAGC 1 cut(s) 1062
BlsI GCNGC 9 cut(s) 16, 19, 128, 454, 625, 685, 937, 952, 1021
Bme1390I CCNGG 4 cut(s) 56, 957, 1152, 1414
Bme18I GGWCC 1 cut(s) 153
BmgBI CACGTC 2 cut(s) 67, 1258
BmgT120I GGNCC 3 cut(s) 153, 242, 1290
BmiI GGNNCC 3 cut(s) 190, 585, 1001
BmrFI CCNGG 4 cut(s) 56, 957, 1152, 1414
BmrI ACTGGG 1 cut(s) 150
BmsI GCATC 9 cut(s) 243, 310, 346, 732, 937, 1224, 1230, 1365, 1428
BmuI ACTGGG 1 cut(s) 150
BoxI GACNNNNGTC 1 cut(s) 519
Bpu10I CCTNAGC 1 cut(s) 1124
Bpu1102I GCTNAGC 1 cut(s) 1062
BpuMI CCSGG 3 cut(s) 957, 1152, 1414
Bsa29I ATCGAT 1 cut(s) 1232
BsaBI GATNNNNATC 2 cut(s) 473, 594
BsaJI CCNNGG 2 cut(s) 1150, 1413
BsaWI WCCGGW 2 cut(s) 971, 1309
Bsc4I CCNNNNNNNGG 2 cut(s) 847, 1129
Bse118I RCCGGY 4 cut(s) 97, 314, 844, 971
Bse1I ACTGG 3 cut(s) 145, 531, 718
Bse3DI GCAATG 1 cut(s) 780
Bse8I GATNNNNATC 2 cut(s) 473, 594
BseBI CCWGG 1 cut(s) 56
BseCI ATCGAT 1 cut(s) 1232
BseDI CCNNGG 2 cut(s) 1150, 1413
BseGI GGATG 3 cut(s) 236, 361, 1194
BseJI GATNNNNATC 2 cut(s) 473, 594
BseLI CCNNNNNNNGG 2 cut(s) 847, 1129
BseMI GCAATG 1 cut(s) 780
BseMII CTCAG 3 cut(s) 593, 1076, 1138
BseNI ACTGG 3 cut(s) 145, 531, 718
BseRI GAGGAG 2 cut(s) 274, 956
BseXI GCAGC 4 cut(s) 464, 635, 695, 962
Bsh1236I CGCG 1 cut(s) 158
BshFI GGCC 5 cut(s) 51, 71, 126, 243, 1291
BshTI ACCGGT 1 cut(s) 971
BshVI ATCGAT 1 cut(s) 1232
BsiHKAI GWGCWC 1 cut(s) 1355
BslFI GGGAC 2 cut(s) 71, 157
BslI CCNNNNNNNGG 2 cut(s) 847, 1129
BsmAI GTCTC 3 cut(s) 713, 771, 1167
BsmFI GGGAC 2 cut(s) 71, 157
BsnI GGCC 5 cut(s) 51, 71, 126, 243, 1291
Bsp1286I GDGCHC 1 cut(s) 1355
Bsp1720I GCTNAGC 1 cut(s) 1062
BspACI CCGC 8 cut(s) 12, 18, 127, 156, 179, 848, 936, 1020
BspANI GGCC 5 cut(s) 51, 71, 126, 243, 1291
BspCNI CTCAG 3 cut(s) 592, 1075, 1137
BspDI ATCGAT 1 cut(s) 1232
BspFNI CGCG 1 cut(s) 158
BspLI GGNNCC 3 cut(s) 190, 585, 1001
BspPI GGATC 8 cut(s) 183, 196, 242, 477, 617, 831, 1274, 1429
BspTI CTTAAG 1 cut(s) 1448
BsrDI GCAATG 1 cut(s) 780
BsrFI RCCGGY 4 cut(s) 97, 314, 844, 971
BsrI ACTGG 3 cut(s) 145, 531, 718
BssAI RCCGGY 4 cut(s) 97, 314, 844, 971
BssECI CCNNGG 2 cut(s) 1150, 1413
BssSI CACGAG 1 cut(s) 1354
Bst2BI CACGAG 1 cut(s) 1354
Bst2UI CCWGG 1 cut(s) 56
Bst4CI ACNGT 6 cut(s) 32, 148, 733, 832, 1225, 1300
BstAFI CTTAAG 1 cut(s) 1448
BstC8I GCNNGC 3 cut(s) 73, 160, 241
BstDEI CTNAG 6 cut(s) 296, 579, 1062, 1124, 1270, 1379
BstENI CCTNNNNNAGG 1 cut(s) 1127
BstF5I GGATG 3 cut(s) 236, 361, 1194
BstFNI CGCG 1 cut(s) 158
BstH2I RGCGCY 1 cut(s) 165
BstHHI GCGC 1 cut(s) 164
BstMAI GTCTC 3 cut(s) 713, 771, 1167
BstMWI GCNNNNNNNGC 2 cut(s) 245, 1019
BstNI CCWGG 1 cut(s) 56
BstNSI RCATGY 2 cut(s) 529, 913
BstPAI GACNNNNGTC 1 cut(s) 519
BstSCI CCNGG 4 cut(s) 54, 955, 1150, 1412
BstSFI CTRYAG 1 cut(s) 307
BstUI CGCG 1 cut(s) 158
BstV1I GCAGC 4 cut(s) 464, 635, 695, 962
BstX2I RGATCY 6 cut(s) 188, 482, 567, 609, 836, 1266
BstXI CCANNNNNNTGG 3 cut(s) 503, 773, 1040
BstYI RGATCY 6 cut(s) 188, 482, 567, 609, 836, 1266
Bsu15I ATCGAT 1 cut(s) 1232
BsuI GTATCC 2 cut(s) 434, 820
BsuRI GGCC 5 cut(s) 51, 71, 126, 243, 1291
BsuTUI ATCGAT 1 cut(s) 1232
BtgZI GCGATG 1 cut(s) 333
BtrI CACGTC 2 cut(s) 67, 1258
BtsCI GGATG 3 cut(s) 236, 361, 1194
BtsI GCAGTG 1 cut(s) 330
BtsIMutI CAGTG 3 cut(s) 330, 711, 738
Cac8I GCNNGC 3 cut(s) 73, 160, 241
CaiI CAGNNNCTG 1 cut(s) 329
CfoI GCGC 1 cut(s) 164
Cfr10I RCCGGY 4 cut(s) 97, 314, 844, 971
Cfr13I GGNCC 3 cut(s) 153, 242, 1290
ClaI ATCGAT 1 cut(s) 1232
CsiI ACCWGGT 1 cut(s) 54
Csp6I GTAC 1 cut(s) 793
CspAI ACCGGT 1 cut(s) 971
CspCI CAANNNNNGTGG 2 cut(s) 379, 414
CviAII CATG 6 cut(s) 352, 466, 519, 526, 544, 910
CviQI GTAC 1 cut(s) 793
DdeI CTNAG 6 cut(s) 296, 579, 1062, 1124, 1270, 1379
DraI TTTAAA 1 cut(s) 106
EaeI YGGCCR 3 cut(s) 49, 69, 124
EciI GGCGGA 1 cut(s) 863
Eco32I GATATC 2 cut(s) 1106, 1230
Eco47I GGWCC 1 cut(s) 153
Eco47III AGCGCT 1 cut(s) 163
EcoNI CCTNNNNNAGG 1 cut(s) 1127
EcoRII CCWGG 1 cut(s) 54
EcoRV GATATC 2 cut(s) 1106, 1230
FaeI CATG 6 cut(s) 355, 469, 522, 529, 547, 913
FaqI GGGAC 2 cut(s) 71, 157
FatI CATG 6 cut(s) 351, 465, 518, 525, 543, 909
FblI GTMKAC 1 cut(s) 1472
Fnu4HI GCNGC 9 cut(s) 15, 18, 127, 453, 624, 684, 936, 951, 1020
FokI GGATG 3 cut(s) 243, 368, 1201
Fsp4HI GCNGC 9 cut(s) 15, 18, 127, 453, 624, 684, 936, 951, 1020
FspBI CTAG 1 cut(s) 659
GlaI GCGC 1 cut(s) 163
GluI GCNGC 9 cut(s) 15, 18, 127, 453, 624, 684, 936, 951, 1020
HaeII RGCGCY 1 cut(s) 165
HaeIII GGCC 5 cut(s) 51, 71, 126, 243, 1291
HhaI GCGC 1 cut(s) 164
Hin1II CATG 6 cut(s) 355, 469, 522, 529, 547, 913
Hin6I GCGC 1 cut(s) 162
HinP1I GCGC 1 cut(s) 162
HinfI GANTC 8 cut(s) 406, 418, 669, 736, 820, 851, 981, 1146
HphI GGTGA 3 cut(s) 17, 26, 961
Hpy166II GTNNAC 5 cut(s) 1033, 1177, 1195, 1370, 1473
Hpy188I TCNGA 5 cut(s) 188, 230, 600, 728, 1145
Hpy188III TCNNGA 8 cut(s) 391, 478, 587, 817, 824, 1109, 1186, 1264
Hpy8I GTNNAC 5 cut(s) 1033, 1177, 1195, 1370, 1473
Hpy99I CGWCG 1 cut(s) 1259
HpyAV CCTTC 3 cut(s) 646, 772, 1330
HpyCH4III ACNGT 6 cut(s) 32, 148, 733, 832, 1225, 1300
HpyCH4IV ACGT 3 cut(s) 66, 1179, 1257
HpyCH4V TGCA 5 cut(s) 221, 323, 623, 683, 950
HpyF10VI GCNNNNNNNGC 2 cut(s) 245, 1019
HpyF3I CTNAG 6 cut(s) 296, 579, 1062, 1124, 1270, 1379
HpySE526I ACGT 3 cut(s) 66, 1179, 1257
Hsp92II CATG 6 cut(s) 355, 469, 522, 529, 547, 913
HspAI GCGC 1 cut(s) 162
LmnI GCTCC 3 cut(s) 1005, 1043, 1350
Lsp1109I GCAGC 4 cut(s) 464, 635, 695, 962
LweI GCATC 9 cut(s) 243, 310, 346, 732, 937, 1224, 1230, 1365, 1428
MabI ACCWGGT 1 cut(s) 54
MaeI CTAG 1 cut(s) 659
MaeII ACGT 3 cut(s) 66, 1179, 1257
MaeIII GTNAC 6 cut(s) 32, 271, 521, 733, 892, 1213
MboII GAAGA 3 cut(s) 760, 877, 895
MfeI CAATTG 1 cut(s) 435
MflI RGATCY 6 cut(s) 188, 482, 567, 609, 836, 1266
MhlI GDGCHC 1 cut(s) 1355
MlsI TGGCCA 1 cut(s) 71
MluCI AATT 3 cut(s) 369, 435, 1133
MluNI TGGCCA 1 cut(s) 71
MlyI GAGTC 1 cut(s) 730
MmeI TCCRAC 3 cut(s) 510, 1021, 1399
MnlI CCTC 9 cut(s) 99, 140, 295, 500, 974, 977, 1046, 1133, 1326
Mox20I TGGCCA 1 cut(s) 71
MscI TGGCCA 1 cut(s) 71
MseI TTAA 5 cut(s) 105, 1158, 1251, 1326, 1449
MslI CAYNNNNRTG 4 cut(s) 208, 350, 464, 501
Msp20I TGGCCA 1 cut(s) 71
MspA1I CMGCKG 2 cut(s) 14, 626
MspCI CTTAAG 1 cut(s) 1448
MspR9I CCNGG 4 cut(s) 56, 957, 1152, 1414
MunI CAATTG 1 cut(s) 435
MvaI CCWGG 1 cut(s) 56
MvnI CGCG 1 cut(s) 158
MwoI GCNNNNNNNGC 2 cut(s) 245, 1019
NciI CCSGG 3 cut(s) 957, 1152, 1414
NlaIII CATG 6 cut(s) 355, 469, 522, 529, 547, 913
NlaIV GGNNCC 3 cut(s) 190, 585, 1001
NmuCI GTSAC 4 cut(s) 32, 521, 733, 892
NspI RCATGY 2 cut(s) 529, 913
OliI CACNNNNGTG 1 cut(s) 501
PciI ACATGT 1 cut(s) 525
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PfeI GAWTC 7 cut(s) 406, 418, 669, 820, 851, 981, 1146
PflFI GACNNNGTC 1 cut(s) 1259
PinAI ACCGGT 1 cut(s) 971
PkrI GCNGC 9 cut(s) 16, 19, 128, 454, 625, 685, 937, 952, 1021
PleI GAGTC 1 cut(s) 730
PpsI GAGTC 1 cut(s) 730
PscI ACATGT 1 cut(s) 525
PshAI GACNNNNGTC 1 cut(s) 519
Psp1406I AACGTT 1 cut(s) 1179
Psp6I CCWGG 1 cut(s) 54
PspGI CCWGG 1 cut(s) 54
PspN4I GGNNCC 3 cut(s) 190, 585, 1001
PspPI GGNCC 3 cut(s) 153, 242, 1290
PstNI CAGNNNCTG 1 cut(s) 329
PsuI RGATCY 6 cut(s) 188, 482, 567, 609, 836, 1266
PsyI GACNNNGTC 1 cut(s) 1259
PvuII CAGCTG 1 cut(s) 626
RsaI GTAC 1 cut(s) 794
RsaNI GTAC 1 cut(s) 793
RseI CAYNNNNRTG 4 cut(s) 208, 350, 464, 501
SaqAI TTAA 5 cut(s) 105, 1158, 1251, 1326, 1449
SatI GCNGC 9 cut(s) 15, 18, 127, 453, 624, 684, 936, 951, 1020
Sau96I GGNCC 3 cut(s) 153, 242, 1290
SchI GAGTC 1 cut(s) 730
ScrFI CCNGG 4 cut(s) 56, 957, 1152, 1414
SduI GDGCHC 1 cut(s) 1355
SexAI ACCWGGT 1 cut(s) 54
SfaNI GCATC 9 cut(s) 243, 310, 346, 732, 937, 1224, 1230, 1365, 1428
SfcI CTRYAG 1 cut(s) 307
SgrAI CRCCGGYG 1 cut(s) 844
SinI GGWCC 1 cut(s) 153
SmiMI CAYNNNNRTG 4 cut(s) 208, 350, 464, 501
SmlI CTYRAG 1 cut(s) 1448
SmoI CTYRAG 1 cut(s) 1448
Sse9I AATT 3 cut(s) 369, 435, 1133
SsiI CCGC 8 cut(s) 12, 18, 127, 156, 179, 848, 936, 1020
SspMI CTAG 1 cut(s) 659
StyD4I CCNGG 4 cut(s) 54, 955, 1150, 1412
TaaI ACNGT 6 cut(s) 32, 148, 733, 832, 1225, 1300
TaiI ACGT 3 cut(s) 69, 1182, 1260
TaqI TCGA 6 cut(s) 114, 364, 594, 816, 854, 1232
TasI AATT 3 cut(s) 369, 435, 1133
TauI GCSGC 4 cut(s) 20, 129, 938, 1022
TfiI GAWTC 7 cut(s) 406, 418, 669, 820, 851, 981, 1146
Tru1I TTAA 5 cut(s) 105, 1158, 1251, 1326, 1449
Tru9I TTAA 5 cut(s) 105, 1158, 1251, 1326, 1449
TscAI CASTG 3 cut(s) 330, 718, 738
TseFI GTSAC 4 cut(s) 32, 521, 733, 892
TseI GCWGC 5 cut(s) 14, 452, 623, 683, 950
Tsp45I GTSAC 4 cut(s) 32, 521, 733, 892
TspDTI ATGAA 1 cut(s) 878
TspRI CASTG 3 cut(s) 330, 718, 738
Tth111I GACNNNGTC 1 cut(s) 1259
Vha464I CTTAAG 1 cut(s) 1448
VpaK11BI GGWCC 1 cut(s) 153
XagI CCTNNNNNAGG 1 cut(s) 1127
XapI RAATTY 1 cut(s) 1133
XceI RCATGY 2 cut(s) 529, 913
XcmI CCANNNNNNNNNTGG 1 cut(s) 466
XmiI GTMKAC 1 cut(s) 1472
XspI CTAG 1 cut(s) 659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.