AT5G09740

Histone acetyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
3021932 .. 3024763
2832 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G09740.1

Sequence Viewer

Length: 1338 bp
ATGGGATCGTCAGCGAATACAGAAACCAACGGCAACGCACCGCCACCGTCGTCGAATCAAAAGCCTCCGGCTACGAACGGCGTTGATGGGTCTCATCCTCCTCCTCCTCCTTTAACTCCTGATCAAGCTATTATAGAGTCGGATCCGTCGAAGAAGAGGAAAATGGGGATGCTTCCTCTAGAAGTGGGTACTCGTGTGATGTGTCGGTGGAGAGACGGGAAACACCATCCGGTGAAAGTAATTGAGCGCCGGCGGATACATAACGGCGGTCAAAATGATTACGAGTATTACGTTCATTACACTGAGTTTAATAGGAGGCTGGATGAATGGACTCAGCTGGACCAACTGGACCTTGATTCAGTAGAGTGCGCTGTAGATGAAAAAGTGGAAGACAAGGTAACAAGCTTGAAGATGACACGTCACCAGAAGAGGAAGATCGATGAGACACATATAGAGGGTCATGAAGAGCTGGATGCAGCAAGTTTGCGTGAACATGAAGAGTTCACGAAAGTGAAGAACATATCAACAATTGAGCTTGGAAAATATGAGATTGAGACTTGGTACTTCTCCCCTTTTCCGCCAGAATACAATGACTGTGTGAAGCTCTTTTTTTGTGAGTTTTGCCTGAACTTCATGAAACGCAAAGAGCAGCTTCAAAGGCATATGAGGAAGTGTGACCTGAAGCACCCACCTGGTGATGAAATTTACCGAAGTGGTACCTTGTCAATGTTTGAGGTAGATGGCAAAAAGAACAAGGTTTATGCACAGAATCTCTGCTACCTGGCAAAGTTATTTCTTGACCACAAAACTCTTTACTACGATGTTGATTTGTTTCTATTCTACGTTCTTTGCGAATGTGATGACCGAGGATGCCACATGGTTGGGTACTTTTCAAAGGAGAAGCATTCGGAAGAAGCATACAACTTAGCTTGCATTCTAACCCTGCCTTCATATCAAAGAAAAGGCTATGGAAAGTTCTTAATAGCCTTTTCCTATGAACTGTCAAAGAAAGAGGGAAAAGTTGGGACACCGGAAAGACCCTTGTCGGATCTAGGCTTACTAAGCTACAGAGGTTATTGGACTCGTGTTCTATTAGAAATCTTGAAAAAACATAAGGGAAACATTTCTATCAAGGAGCTGAGCGACGTGACAGCAATCAAAGCGGAAGATATATTAAGCACACTTCAGAGCCTAGAACTGATACAGTACAGGAAAGGACAGCATGTGATCTGTGCGGATCCAAAGGTTCTGGACCGACATCTGAAAGCTGCAGGCCGAGGTGGTCTTGATGTAGATGCTAGCAAACTGATTTGGACACCTTACAAGGACCAGAGTTAA

Protein Analysis

445

Amino Acids

51.37

Weight (kDa)

6.99

Isoelectric Point (pI)

45.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tudor-knot PF11717 60 - 118 1.5e-20 RNA binding activity-knot of a chromodomain
zf-MYST PF17772 171 - 225 6.4e-25 MYST family zinc finger domain
MOZ_SAS PF01853 230 - 407 1.3e-86 MOZ/SAS family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010476)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 716
AccB1I GGYRCC 1 cut(s) 716
AciI CCGC 6 cut(s) 41, 253, 267, 578, 1163, 1235
AclWI GGATC 6 cut(s) 13, 137, 150, 1056, 1232, 1245
AcsI RAATTY 1 cut(s) 702
AcuI CTGAAG 2 cut(s) 701, 1169
AdeI CACNNNGTG 1 cut(s) 695
AfaI GTAC 5 cut(s) 190, 563, 718, 887, 1208
AflIII ACRYGT 1 cut(s) 416
AgsI TTSAA 4 cut(s) 409, 656, 894, 1105
AjiI CACGTC 2 cut(s) 419, 1147
AjnI CCWGG 2 cut(s) 691, 780
AleI CACNNNNGTG 1 cut(s) 509
Alw26I GTCTC 4 cut(s) 96, 207, 437, 548
AlwI GGATC 6 cut(s) 13, 137, 150, 1056, 1232, 1245
AoxI GGCC 1 cut(s) 1273
ApeKI GCWGC 3 cut(s) 476, 649, 1268
ApoI RAATTY 1 cut(s) 702
Asp700I GAANNNNTTC 1 cut(s) 1123
Asp718I GGTACC 1 cut(s) 716
AspLEI GCGC 2 cut(s) 249, 371
AspS9I GGNCC 4 cut(s) 340, 349, 1252, 1327
AsuHPI GGTGA 3 cut(s) 244, 413, 707
AsuNHI GCTAGC 1 cut(s) 1298
AvaII GGWCC 4 cut(s) 340, 349, 1252, 1327
BaeI ACNNNNGTAYC 2 cut(s) 180, 213
BamHI GGATCC 2 cut(s) 142, 1237
BanI GGYRCC 1 cut(s) 716
BauI CACGAG 2 cut(s) 192, 1083
BbsI GAAGAC 1 cut(s) 396
BbvI GCAGC 3 cut(s) 488, 661, 1255
BccI CCATC 3 cut(s) 80, 234, 734
BceAI ACGGC 3 cut(s) 46, 94, 280
BciT130I CCWGG 2 cut(s) 693, 782
BciVI GTATCC 1 cut(s) 249
BclI TGATCA 1 cut(s) 121
BcoDI GTCTC 4 cut(s) 96, 207, 437, 548
BfaI CTAG 4 cut(s) 179, 1052, 1193, 1299
BfmI CTRYAG 3 cut(s) 372, 1066, 1269
BfoI RGCGCY 1 cut(s) 250
BfuI GTATCC 1 cut(s) 249
BisI GCNGC 3 cut(s) 477, 650, 1269
BlpI GCTNAGC 1 cut(s) 1139
BlsI GCNGC 3 cut(s) 478, 651, 1270
Bme1390I CCNGG 2 cut(s) 693, 782
Bme18I GGWCC 4 cut(s) 340, 349, 1252, 1327
BmgBI CACGTC 2 cut(s) 419, 1147
BmgT120I GGNCC 4 cut(s) 340, 349, 1252, 1327
BmiI GGNNCC 3 cut(s) 144, 718, 1239
BmrFI CCNGG 2 cut(s) 693, 782
BmsI GCATC 4 cut(s) 159, 463, 860, 1285
BmtI GCTAGC 1 cut(s) 1302
BoxI GACNNNNGTC 1 cut(s) 1042
BpiI GAAGAC 1 cut(s) 396
Bpu1102I GCTNAGC 1 cut(s) 1139
Bsa29I ATCGAT 1 cut(s) 438
BsaI GGTCTC 1 cut(s) 96
BsaJI CCNNGG 2 cut(s) 865, 1276
BsaWI WCCGGW 2 cut(s) 229, 1030
Bse118I RCCGGY 1 cut(s) 249
Bse1I ACTGG 1 cut(s) 351
BseBI CCWGG 2 cut(s) 693, 782
BseCI ATCGAT 1 cut(s) 438
BseDI CCNNGG 2 cut(s) 865, 1276
BseGI GGATG 6 cut(s) 94, 174, 226, 328, 478, 875
BseMII CTCAG 3 cut(s) 294, 347, 1130
BseNI ACTGG 1 cut(s) 351
BseRI GAGGAG 3 cut(s) 90, 93, 96
BseXI GCAGC 3 cut(s) 488, 661, 1255
BshFI GGCC 1 cut(s) 1275
BshNI GGYRCC 1 cut(s) 716
BshVI ATCGAT 1 cut(s) 438
BsiSI CCGG 4 cut(s) 68, 230, 250, 1031
BslFI GGGAC 1 cut(s) 1039
BsmAI GTCTC 4 cut(s) 96, 207, 437, 548
BsmBI CGTCTC 1 cut(s) 207
BsmFI GGGAC 1 cut(s) 1039
BsmI GAATGC 2 cut(s) 904, 933
BsnI GGCC 1 cut(s) 1275
Bso31I GGTCTC 1 cut(s) 96
Bsp143I GATC 7 cut(s) 5, 121, 142, 435, 1048, 1227, 1237
Bsp1720I GCTNAGC 1 cut(s) 1139
BspACI CCGC 6 cut(s) 41, 253, 267, 578, 1163, 1235
BspANI GGCC 1 cut(s) 1275
BspCNI CTCAG 3 cut(s) 295, 346, 1131
BspDI ATCGAT 1 cut(s) 438
BspHI TCATGA 2 cut(s) 460, 633
BspLI GGNNCC 3 cut(s) 144, 718, 1239
BspMAI CTGCAG 1 cut(s) 1273
BspOI GCTAGC 1 cut(s) 1302
BspPI GGATC 6 cut(s) 13, 137, 150, 1056, 1232, 1245
BspQI GCTCTTC 1 cut(s) 459
BspT107I GGYRCC 1 cut(s) 716
BspTNI GGTCTC 1 cut(s) 96
BsrFI RCCGGY 1 cut(s) 249
BsrI ACTGG 1 cut(s) 351
BssAI RCCGGY 1 cut(s) 249
BssECI CCNNGG 2 cut(s) 865, 1276
BssMI GATC 7 cut(s) 5, 121, 142, 435, 1048, 1227, 1237
BssSI CACGAG 2 cut(s) 192, 1083
Bst2BI CACGAG 2 cut(s) 192, 1083
Bst2UI CCWGG 2 cut(s) 693, 782
Bst4CI ACNGT 4 cut(s) 48, 596, 1002, 1206
Bst6I CTCTTC 4 cut(s) 149, 422, 459, 492
BstC8I GCNNGC 4 cut(s) 251, 931, 1273, 1300
BstDEI CTNAG 5 cut(s) 303, 333, 925, 1061, 1139
BstF5I GGATG 6 cut(s) 94, 174, 226, 328, 478, 875
BstH2I RGCGCY 1 cut(s) 250
BstHHI GCGC 2 cut(s) 249, 371
BstKTI GATC 7 cut(s) 8, 124, 145, 438, 1051, 1230, 1240
BstMAI GTCTC 4 cut(s) 96, 207, 437, 548
BstMBI GATC 7 cut(s) 5, 121, 142, 435, 1048, 1227, 1237
BstMWI GCNNNNNNNGC 3 cut(s) 658, 1062, 1160
BstNI CCWGG 2 cut(s) 693, 782
BstNSI RCATGY 1 cut(s) 1226
BstPAI GACNNNNGTC 1 cut(s) 1042
BstSCI CCNGG 2 cut(s) 691, 780
BstSFI CTRYAG 3 cut(s) 372, 1066, 1269
BstV1I GCAGC 3 cut(s) 488, 661, 1255
BstV2I GAAGAC 1 cut(s) 396
BstX2I RGATCY 3 cut(s) 142, 1048, 1237
BstXI CCANNNNNNTGG 1 cut(s) 881
BstYI RGATCY 3 cut(s) 142, 1048, 1237
Bsu15I ATCGAT 1 cut(s) 438
BsuI GTATCC 1 cut(s) 249
BsuRI GGCC 1 cut(s) 1275
BsuTUI ATCGAT 1 cut(s) 438
BtrI CACGTC 2 cut(s) 419, 1147
BtsCI GGATG 6 cut(s) 94, 174, 226, 328, 478, 875
BtsIMutI CAGTG 1 cut(s) 300
Cac8I GCNNGC 4 cut(s) 251, 931, 1273, 1300
CciI TCATGA 2 cut(s) 460, 633
CfoI GCGC 2 cut(s) 249, 371
Cfr10I RCCGGY 1 cut(s) 249
Cfr13I GGNCC 4 cut(s) 340, 349, 1252, 1327
ClaI ATCGAT 1 cut(s) 438
CsiI ACCWGGT 1 cut(s) 691
Csp6I GTAC 5 cut(s) 189, 562, 717, 886, 1207
CviAII CATG 5 cut(s) 461, 494, 634, 877, 1223
CviQI GTAC 5 cut(s) 189, 562, 717, 886, 1207
DdeI CTNAG 5 cut(s) 303, 333, 925, 1061, 1139
DpnI GATC 7 cut(s) 7, 123, 144, 437, 1050, 1229, 1239
DpnII GATC 7 cut(s) 5, 121, 142, 435, 1048, 1227, 1237
DraIII CACNNNGTG 1 cut(s) 695
Eam1104I CTCTTC 4 cut(s) 149, 422, 459, 492
EarI CTCTTC 4 cut(s) 149, 422, 459, 492
EciI GGCGGA 2 cut(s) 268, 567
Eco31I GGTCTC 1 cut(s) 96
Eco47I GGWCC 4 cut(s) 340, 349, 1252, 1327
Eco57I CTGAAG 2 cut(s) 701, 1169
EcoRII CCWGG 2 cut(s) 691, 780
Esp3I CGTCTC 1 cut(s) 207
FaeI CATG 5 cut(s) 464, 497, 637, 880, 1226
FalI AAGNNNNNCTT 2 cut(s) 636, 668
FaqI GGGAC 1 cut(s) 1039
FatI CATG 5 cut(s) 460, 493, 633, 876, 1222
FauNDI CATATG 1 cut(s) 663
FbaI TGATCA 1 cut(s) 121
Fnu4HI GCNGC 3 cut(s) 477, 650, 1269
FokI GGATG 6 cut(s) 81, 181, 213, 335, 485, 882
Fsp4HI GCNGC 3 cut(s) 477, 650, 1269
FspBI CTAG 4 cut(s) 179, 1052, 1193, 1299
GlaI GCGC 2 cut(s) 248, 370
GluI GCNGC 3 cut(s) 477, 650, 1269
HaeII RGCGCY 1 cut(s) 250
HaeIII GGCC 1 cut(s) 1275
HapII CCGG 4 cut(s) 68, 230, 250, 1031
HhaI GCGC 2 cut(s) 249, 371
Hin1II CATG 5 cut(s) 464, 497, 637, 880, 1226
Hin6I GCGC 2 cut(s) 247, 369
HinP1I GCGC 2 cut(s) 247, 369
HindIII AAGCTT 1 cut(s) 403
HinfI GANTC 6 cut(s) 55, 137, 331, 356, 769, 1081
HpaII CCGG 4 cut(s) 68, 230, 250, 1031
HphI GGTGA 3 cut(s) 244, 413, 707
Hpy166II GTNNAC 2 cut(s) 491, 504
Hpy188I TCNGA 5 cut(s) 142, 910, 1048, 1188, 1263
Hpy188III TCNNGA 9 cut(s) 119, 179, 461, 505, 634, 797, 1102, 1250, 1286
Hpy8I GTNNAC 2 cut(s) 491, 504
Hpy99I CGWCG 4 cut(s) 52, 55, 151, 1148
HpyAV CCTTC 1 cut(s) 957
HpyCH4III ACNGT 4 cut(s) 48, 596, 1002, 1206
HpyCH4IV ACGT 4 cut(s) 291, 418, 843, 1146
HpyCH4V TGCA 4 cut(s) 476, 764, 933, 1271
HpyF10VI GCNNNNNNNGC 3 cut(s) 658, 1062, 1160
HpyF3I CTNAG 5 cut(s) 303, 333, 925, 1061, 1139
HpySE526I ACGT 4 cut(s) 291, 418, 843, 1146
Hsp92II CATG 5 cut(s) 464, 497, 637, 880, 1226
HspAI GCGC 2 cut(s) 247, 369
KpnI GGTACC 1 cut(s) 720
KroI GCCGGC 1 cut(s) 249
KroNI GCCGGC 1 cut(s) 251
Ksp22I TGATCA 1 cut(s) 121
Kzo9I GATC 7 cut(s) 5, 121, 142, 435, 1048, 1227, 1237
LguI GCTCTTC 1 cut(s) 459
LmnI GCTCC 1 cut(s) 1135
Lsp1109I GCAGC 3 cut(s) 488, 661, 1255
LweI GCATC 4 cut(s) 159, 463, 860, 1285
MabI ACCWGGT 1 cut(s) 691
MaeI CTAG 4 cut(s) 179, 1052, 1193, 1299
MaeII ACGT 4 cut(s) 291, 418, 843, 1146
MaeIII GTNAC 4 cut(s) 397, 419, 674, 1147
MalI GATC 7 cut(s) 7, 123, 144, 437, 1050, 1229, 1239
MboI GATC 7 cut(s) 5, 121, 142, 435, 1048, 1227, 1237
MfeI CAATTG 1 cut(s) 528
MflI RGATCY 3 cut(s) 142, 1048, 1237
MluCI AATT 3 cut(s) 240, 528, 702
MlyI GAGTC 3 cut(s) 146, 325, 1075
MmeI TCCRAC 2 cut(s) 120, 1026
MreI CGCCGGCG 1 cut(s) 249
MroNI GCCGGC 1 cut(s) 249
MroXI GAANNNNTTC 1 cut(s) 1123
MseI TTAA 5 cut(s) 113, 309, 980, 1175, 1336
MslI CAYNNNNRTG 1 cut(s) 509
MspA1I CMGCKG 1 cut(s) 337
MspI CCGG 4 cut(s) 68, 230, 250, 1031
MspR9I CCNGG 2 cut(s) 693, 782
MunI CAATTG 1 cut(s) 528
Mva1269I GAATGC 2 cut(s) 904, 933
MvaI CCWGG 2 cut(s) 693, 782
MwoI GCNNNNNNNGC 3 cut(s) 658, 1062, 1160
NaeI GCCGGC 1 cut(s) 251
NdeI CATATG 1 cut(s) 663
NdeII GATC 7 cut(s) 5, 121, 142, 435, 1048, 1227, 1237
NgoMIV GCCGGC 1 cut(s) 249
NheI GCTAGC 1 cut(s) 1298
NlaIII CATG 5 cut(s) 464, 497, 637, 880, 1226
NlaIV GGNNCC 3 cut(s) 144, 718, 1239
NmeAIII GCCGAG 1 cut(s) 1301
NmuCI GTSAC 3 cut(s) 419, 674, 1147
NspI RCATGY 1 cut(s) 1226
OliI CACNNNNGTG 1 cut(s) 509
PagI TCATGA 2 cut(s) 460, 633
PciSI GCTCTTC 1 cut(s) 459
PcsI WCGNNNNNNNCGW 3 cut(s) 146, 288, 849
PctI GAATGC 2 cut(s) 904, 933
PdiI GCCGGC 1 cut(s) 251
PdmI GAANNNNTTC 1 cut(s) 1123
PfeI GAWTC 3 cut(s) 55, 356, 769
PkrI GCNGC 3 cut(s) 478, 651, 1270
PleI GAGTC 3 cut(s) 145, 325, 1075
PpsI GAGTC 3 cut(s) 145, 325, 1075
PshAI GACNNNNGTC 1 cut(s) 1042
Psp6I CCWGG 2 cut(s) 691, 780
PspGI CCWGG 2 cut(s) 691, 780
PspN4I GGNNCC 3 cut(s) 144, 718, 1239
PspPI GGNCC 4 cut(s) 340, 349, 1252, 1327
PstI CTGCAG 1 cut(s) 1273
PsuI RGATCY 3 cut(s) 142, 1048, 1237
PvuII CAGCTG 1 cut(s) 337
RsaI GTAC 5 cut(s) 190, 563, 718, 887, 1208
RsaNI GTAC 5 cut(s) 189, 562, 717, 886, 1207
RseI CAYNNNNRTG 1 cut(s) 509
SapI GCTCTTC 1 cut(s) 459
SaqAI TTAA 5 cut(s) 113, 309, 980, 1175, 1336
SatI GCNGC 3 cut(s) 477, 650, 1269
Sau3AI GATC 7 cut(s) 5, 121, 142, 435, 1048, 1227, 1237
Sau96I GGNCC 4 cut(s) 340, 349, 1252, 1327
SchI GAGTC 3 cut(s) 146, 325, 1075
ScrFI CCNGG 2 cut(s) 693, 782
SexAI ACCWGGT 1 cut(s) 691
SfaNI GCATC 4 cut(s) 159, 463, 860, 1285
SfcI CTRYAG 3 cut(s) 372, 1066, 1269
SgrAI CRCCGGYG 1 cut(s) 249
SinI GGWCC 4 cut(s) 340, 349, 1252, 1327
SmiMI CAYNNNNRTG 1 cut(s) 509
Sse9I AATT 3 cut(s) 240, 528, 702
SsiI CCGC 6 cut(s) 41, 253, 267, 578, 1163, 1235
SspMI CTAG 4 cut(s) 179, 1052, 1193, 1299
StyD4I CCNGG 2 cut(s) 691, 780
TaaI ACNGT 4 cut(s) 48, 596, 1002, 1206
TaiI ACGT 4 cut(s) 294, 421, 846, 1149
TaqI TCGA 3 cut(s) 53, 149, 438
TaqII GACCGA 2 cut(s) 879, 1269
TasI AATT 3 cut(s) 240, 528, 702
TatI WGTACW 1 cut(s) 1206
TfiI GAWTC 3 cut(s) 55, 356, 769
Tru1I TTAA 5 cut(s) 113, 309, 980, 1175, 1336
Tru9I TTAA 5 cut(s) 113, 309, 980, 1175, 1336
TscAI CASTG 1 cut(s) 307
TseFI GTSAC 3 cut(s) 419, 674, 1147
TseI GCWGC 3 cut(s) 476, 649, 1268
Tsp45I GTSAC 3 cut(s) 419, 674, 1147
TspGWI ACGGA 1 cut(s) 135
TspRI CASTG 1 cut(s) 307
VpaK11BI GGWCC 4 cut(s) 340, 349, 1252, 1327
XapI RAATTY 1 cut(s) 702
XbaI TCTAGA 1 cut(s) 178
XceI RCATGY 1 cut(s) 1226
XmnI GAANNNNTTC 1 cut(s) 1123
XspI CTAG 4 cut(s) 179, 1052, 1193, 1299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.