Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0010476

Physical Location & Seq

Genomic Coordinates Forward (+)

1682404 .. 1688146

Gene Structure 5743 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00219580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGGTTCGATAGGCACGTCTCCGGTTGCGGAAAACGGTTCTGATACTCCCAACGGCGCCGCCGTCACATACGACGGCGAGAACAAGCCTCACTCCGGCGATGGCTATCCTCCATTGGCCGCCGAGACGACGCCGGAGTCGGAAGCGTCCAAGAAGCGGAGGATGTCCATGCTTCCTTTGGAGGTCGGCACGAGTGTAATGTGTCGTTGGAGAGACTCCAAGTACCATCCCGTCAAGGTTATCGAACGCCGGAGGGTTCACGGCGGCGGGCCCAACGATTACGAGTATTACGTTCACTACACCGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAACTTGATCAACTTGATCTTGATTCAGTAGAGGCTGTTGTTGATGAGAAAGTGGAGGACAAGGTTACAAGCTTGAAAATGACTCGCCATCAGAAGCGGAAGATTGATGAGACACATGTGGAGGGGCACGAGGAACTTGATGCTGCCAGCTTACGCGAACATGAAGAATTCACAAAAGTGAAAAATATAGCGACTATAGAACTTGGAAGATATGAGATTGAGACATGGTACTTCTCCCCCTTTCCACCAGAATATAATGACTCTTTGAAGCTGTACTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTTCAAAGGCATATGAGGAAGTGTGATCTCAAGCATCCTCCTGGTGATGAGATATACCGGAATCATACGCTTTCTATGTTTGAGGTTGATGGTAAAAAGAACAAGGTTTATGGACAGAATCTTTGTTATTTGGCAAAGCTGTTTCTTGATCACAAGACCCTGTATTATGATGTTGACCTCTTTCTATTTTACATTCTATGTGAATGTGATGATCGGGGATGCCATATGGTCGGATATTTTTCAAAGGAAAAGCATTCGGAGGAGTCCTATAACTTGGCATGTATCCTTACCCTTCCTCCTTATCAAAGAAAAGGCTATGGAAAATTTTTAATTGCCTTTTCATATGAACTATCCAAGAAAGAAGGTAAAGTTGGTACGCCCGAAAGGCCCCTCTCTGATCTAGGACTCTTGAGCTACCGAGGATACTGGACTCGGGTGCTTCTAGACATCTTGAAAAAGCATAAGGGAAATATTTCCATCAAGGAGCTCAGTGACATGACTGCCATCAAGGCAGAGGATATTTTGACCACTCTTCAGAGTCTAGAATTAATTCAGTACAGGAAAGGGCAGCATGTCATCTGTGCTGATCCAAAGGTCCTGGACCGTCATCTAAAAGCAGCTGGTCCTGCTGGTCTGGAGGTTGATGTCGGCAAATTAATCTGGACGCCGTATAAAGAGCAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004402 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008080 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0010485 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0033554 GO:0034212 GO:0034641 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0043967 GO:0043981 GO:0043995 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0048580 GO:0048583 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051276 GO:0051716 GO:0061733 GO:0065007 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MOZ_SAS Tudor-knot

Protein Analysis

445

Amino Acids

51.39

Weight (kDa)

6.4

Isoelectric Point (pI)

40.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tudor-knot	PF11717	60 - 118	1.7e-20	RNA binding activity-knot of a chromodomain
zf-MYST	PF17772	171 - 225	4e-25	MYST family zinc finger domain
MOZ_SAS	PF01853	230 - 407	1.3e-86	MOZ/SAS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09740 AT5G09740 AT5G64610
fragaria_vesca	FvH4_5g38850
malus_domestica	MD08G1173300.v1.1 MD15G1358600.v1.1
prunus_persica	Prupe.1G506200_v2.0.a1 Prupe.1G506200_v2.0.a1
pyrus_communis	pycom08g14790 pycom15g32100
rosa_chinensis	RchiOBHm_Chr7g0240841
rosa_laevigata	RLG00000000621
rosa_multiflora	Rmu_co8495669.1_g000001
rosa_roxburghii	Rroxscaffold_3G00219580
rosa_rugosa	Rorug07G0339400
rosa_samantha	Rh7AG493800 Rh7BG465700 Rh7CG512200 Rh7DG478900
rosa_wichuraiana	Rw0G010710 Rw7G041780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	136
AccB1I	GGYRCC	1 cut(s)	56
AccII	CGCG	1 cut(s)	489
AciI	CCGC	7 cut(s)	29, 60, 120, 157, 264, 267, 430
AclWI	GGATC	1 cut(s)	1232
AcoI	YGGCCR	1 cut(s)	117
AcsI	RAATTY	2 cut(s)	500, 974
AcuI	CTGAAG	1 cut(s)	1169
AcyI	GRCGYC	3 cut(s)	57, 131, 1316
AfaI	GTAC	5 cut(s)	224, 563, 608, 1027, 1208
AfiI	CCNNNNNNNGG	2 cut(s)	95, 156
AflIII	ACRYGT	1 cut(s)	448
AgsI	TTSAA	6 cut(s)	310, 409, 601, 656, 894, 1105
AjiI	CACGTC	1 cut(s)	18
AjnI	CCWGG	2 cut(s)	691, 1248
AjuI	GAANNNNNNNTTGG	2 cut(s)	1005, 1037
AleI	CACNNNNGTG	1 cut(s)	509
AluBI	AGCT	8 cut(s)	405, 483, 604, 652, 790, 1065, 1138, 1271
AluI	AGCT	8 cut(s)	405, 483, 604, 652, 790, 1065, 1138, 1271
Alw21I	GWGCWC	1 cut(s)	1140
Alw26I	GTCTC	6 cut(s)	24, 119, 207, 437, 548, 629
AlwI	GGATC	1 cut(s)	1232
Ama87I	CYCGRG	1 cut(s)	1083
AoxI	GGCC	3 cut(s)	117, 269, 1037
ApaI	GGGCCC	1 cut(s)	273
ApeKI	GCWGC	3 cut(s)	476, 1219, 1268
ApoI	RAATTY	2 cut(s)	500, 974
ArsI	GACNNNNNNTTYG	2 cut(s)	756, 788
AseI	ATTAAT	2 cut(s)	1199, 1307
Asp700I	GAANNNNTTC	3 cut(s)	651, 1123, 1200
AspLEI	GCGC	2 cut(s)	59, 642
AspS9I	GGNCC	6 cut(s)	269, 270, 1038, 1246, 1252, 1274
AsuHPI	GGTGA	2 cut(s)	343, 707
AvaI	CYCGRG	1 cut(s)	1083
AvaII	GGWCC	3 cut(s)	1246, 1252, 1274
BaeGI	GKGCMC	2 cut(s)	273, 462
BanI	GGYRCC	1 cut(s)	56
BanII	GRGCYC	2 cut(s)	273, 1140
BauI	CACGAG	2 cut(s)	190, 461
Bbv12I	GWGCWC	1 cut(s)	1140
BbvI	GCAGC	3 cut(s)	463, 1231, 1280
BccI	CCATC	6 cut(s)	95, 234, 429, 734, 1136, 1163
BceAI	ACGGC	5 cut(s)	47, 70, 91, 277, 1303
BciT130I	CCWGG	2 cut(s)	693, 1250
BciVI	GTATCC	2 cut(s)	944, 1067
BclI	TGATCA	2 cut(s)	340, 799
BcoDI	GTCTC	6 cut(s)	24, 119, 207, 437, 548, 629
BfaI	CTAG	3 cut(s)	1052, 1094, 1193
BfmI	CTRYAG	1 cut(s)	528
BfoI	RGCGCY	1 cut(s)	60
BfuI	GTATCC	2 cut(s)	944, 1067
BglI	GCCNNNNNGGC	2 cut(s)	1036, 1160
BisI	GCNGC	6 cut(s)	60, 120, 265, 477, 1220, 1269
BlsI	GCNGC	6 cut(s)	61, 121, 266, 478, 1221, 1270
Bme1390I	CCNGG	2 cut(s)	693, 1250
Bme18I	GGWCC	3 cut(s)	1246, 1252, 1274
BmeT110I	CYCGRG	1 cut(s)	1083
BmgBI	CACGTC	1 cut(s)	18
BmgT120I	GGNCC	6 cut(s)	269, 270, 1038, 1246, 1252, 1274
BmiI	GGNNCC	3 cut(s)	58, 271, 1040
BmrFI	CCNGG	2 cut(s)	693, 1250
BmsI	GCATC	3 cut(s)	463, 694, 860
BpmI	CTGGAG	1 cut(s)	1307
BpuEI	CTTGAG	2 cut(s)	665, 1081
BsaBI	GATNNNNATC	1 cut(s)	105
BsaHI	GRCGYC	3 cut(s)	57, 131, 1316
BsaJI	CCNNGG	1 cut(s)	1069
BsaWI	WCCGGW	2 cut(s)	22, 708
BsaXI	ACNNNNNCTCC	2 cut(s)	931, 961
Bsc4I	CCNNNNNNNGG	2 cut(s)	95, 156
Bse1I	ACTGG	1 cut(s)	1082
Bse8I	GATNNNNATC	1 cut(s)	105
BseBI	CCWGG	2 cut(s)	693, 1250
BseDI	CCNNGG	1 cut(s)	1069
BseGI	GGATG	4 cut(s)	168, 226, 685, 875
BseJI	GATNNNNATC	1 cut(s)	105
BseLI	CCNNNNNNNGG	2 cut(s)	95, 156
BseMII	CTCAG	1 cut(s)	1153
BseNI	ACTGG	1 cut(s)	1082
BseRI	GAGGAG	1 cut(s)	926
BseSI	GKGCMC	2 cut(s)	273, 462
BseXI	GCAGC	3 cut(s)	463, 1231, 1280
Bsh1236I	CGCG	1 cut(s)	489
BshFI	GGCC	3 cut(s)	119, 271, 1039
BshNI	GGYRCC	1 cut(s)	56
BsiHKAI	GWGCWC	1 cut(s)	1140
BsiHKCI	CYCGRG	1 cut(s)	1083
BsiSI	CCGG	5 cut(s)	23, 96, 134, 250, 709
BslI	CCNNNNNNNGG	2 cut(s)	95, 156
BsmAI	GTCTC	6 cut(s)	24, 119, 207, 437, 548, 629
BsmBI	CGTCTC	2 cut(s)	24, 119
BsmI	GAATGC	1 cut(s)	904
BsnI	GGCC	3 cut(s)	119, 271, 1039
BsoBI	CYCGRG	1 cut(s)	1083
Bsp120I	GGGCCC	1 cut(s)	269
Bsp1286I	GDGCHC	3 cut(s)	273, 462, 1140
Bsp143I	GATC	7 cut(s)	340, 349, 676, 799, 862, 1048, 1237
BspACI	CCGC	7 cut(s)	29, 60, 120, 157, 264, 267, 430
BspANI	GGCC	3 cut(s)	119, 271, 1039
BspCNI	CTCAG	1 cut(s)	1152
BspFNI	CGCG	1 cut(s)	489
BspHI	TCATGA	1 cut(s)	633
BspLI	GGNNCC	3 cut(s)	58, 271, 1040
BspPI	GGATC	1 cut(s)	1232
BspT107I	GGYRCC	1 cut(s)	56
BsrI	ACTGG	1 cut(s)	1082
BssECI	CCNNGG	1 cut(s)	1069
BssMI	GATC	7 cut(s)	340, 349, 676, 799, 862, 1048, 1237
BssNI	GRCGYC	3 cut(s)	57, 131, 1316
BssSI	CACGAG	2 cut(s)	190, 461
Bst2BI	CACGAG	2 cut(s)	190, 461
Bst2UI	CCWGG	2 cut(s)	693, 1250
Bst4CI	ACNGT	2 cut(s)	38, 1256
Bst6I	CTCTTC	1 cut(s)	1188
BstACI	GRCGYC	3 cut(s)	57, 131, 1316
BstC8I	GCNNGC	2 cut(s)	269, 481
BstDEI	CTNAG	1 cut(s)	1139
BstF5I	GGATG	4 cut(s)	168, 226, 685, 875
BstFNI	CGCG	1 cut(s)	489
BstH2I	RGCGCY	1 cut(s)	60
BstHHI	GCGC	2 cut(s)	59, 642
BstKTI	GATC	7 cut(s)	343, 352, 679, 802, 865, 1051, 1240
BstMAI	GTCTC	6 cut(s)	24, 119, 207, 437, 548, 629
BstMBI	GATC	7 cut(s)	340, 349, 676, 799, 862, 1048, 1237
BstMWI	GCNNNNNNNGC	4 cut(s)	658, 1036, 1160, 1277
BstNI	CCWGG	2 cut(s)	693, 1250
BstNSI	RCATGY	3 cut(s)	452, 933, 1226
BstSCI	CCNGG	2 cut(s)	691, 1248
BstSFI	CTRYAG	1 cut(s)	528
BstSLI	GKGCMC	2 cut(s)	273, 462
BstUI	CGCG	1 cut(s)	489
BstV1I	GCAGC	3 cut(s)	463, 1231, 1280
BsuI	GTATCC	2 cut(s)	944, 1067
BsuRI	GGCC	3 cut(s)	119, 271, 1039
BtgZI	GCGATG	1 cut(s)	114
BtrI	CACGTC	1 cut(s)	18
BtsCI	GGATG	4 cut(s)	168, 226, 685, 875
BtsIMutI	CAGTG	1 cut(s)	1147
Cac8I	GCNNGC	2 cut(s)	269, 481
CciI	TCATGA	1 cut(s)	633
CfoI	GCGC	2 cut(s)	59, 642
Cfr13I	GGNCC	6 cut(s)	269, 270, 1038, 1246, 1252, 1274
CseI	GACGC	3 cut(s)	135, 139, 1324
Csp6I	GTAC	5 cut(s)	223, 562, 607, 1026, 1207
CviAII	CATG	8 cut(s)	169, 449, 494, 558, 634, 930, 1147, 1223
CviQI	GTAC	5 cut(s)	223, 562, 607, 1026, 1207
DdeI	CTNAG	1 cut(s)	1139
DinI	GGCGCC	1 cut(s)	58
DpnI	GATC	7 cut(s)	342, 351, 678, 801, 864, 1050, 1239
DpnII	GATC	7 cut(s)	340, 349, 676, 799, 862, 1048, 1237
DrdI	GACNNNNNNGTC	1 cut(s)	136
DseDI	GACNNNNNNGTC	1 cut(s)	136
EaeI	YGGCCR	1 cut(s)	117
Eam1104I	CTCTTC	1 cut(s)	1188
EarI	CTCTTC	1 cut(s)	1188
Ecl136II	GAGCTC	1 cut(s)	1138
Eco24I	GRGCYC	2 cut(s)	273, 1140
Eco47I	GGWCC	3 cut(s)	1246, 1252, 1274
Eco53kI	GAGCTC	1 cut(s)	1138
Eco57I	CTGAAG	1 cut(s)	1169
Eco88I	CYCGRG	1 cut(s)	1083
EcoICRI	GAGCTC	1 cut(s)	1138
EcoO109I	RGGNCCY	2 cut(s)	1038, 1246
EcoRI	GAATTC	1 cut(s)	500
EcoRII	CCWGG	2 cut(s)	691, 1248
EcoT38I	GRGCYC	2 cut(s)	273, 1140
EgeI	GGCGCC	1 cut(s)	58
EheI	GGCGCC	1 cut(s)	58
Esp3I	CGTCTC	2 cut(s)	24, 119
FaeI	CATG	8 cut(s)	172, 452, 497, 561, 637, 933, 1150, 1226
FalI	AAGNNNNNCTT	4 cut(s)	593, 625, 636, 668
FatI	CATG	8 cut(s)	168, 448, 493, 557, 633, 929, 1146, 1222
FauI	CCCGC	1 cut(s)	260
FauNDI	CATATG	3 cut(s)	663, 876, 994
FbaI	TGATCA	2 cut(s)	340, 799
Fnu4HI	GCNGC	6 cut(s)	60, 120, 265, 477, 1220, 1269
FokI	GGATG	4 cut(s)	175, 213, 672, 882
FriOI	GRGCYC	2 cut(s)	273, 1140
Fsp4HI	GCNGC	6 cut(s)	60, 120, 265, 477, 1220, 1269
FspBI	CTAG	3 cut(s)	1052, 1094, 1193
GlaI	GCGC	2 cut(s)	58, 641
GluI	GCNGC	6 cut(s)	60, 120, 265, 477, 1220, 1269
GsuI	CTGGAG	1 cut(s)	1307
HaeII	RGCGCY	1 cut(s)	60
HaeIII	GGCC	3 cut(s)	119, 271, 1039
HapII	CCGG	5 cut(s)	23, 96, 134, 250, 709
HgaI	GACGC	3 cut(s)	135, 139, 1324
HhaI	GCGC	2 cut(s)	59, 642
Hin1I	GRCGYC	3 cut(s)	57, 131, 1316
Hin1II	CATG	8 cut(s)	172, 452, 497, 561, 637, 933, 1150, 1226
Hin6I	GCGC	2 cut(s)	57, 640
HinP1I	GCGC	2 cut(s)	57, 640
HincII	GTYRAC	1 cut(s)	826
HindII	GTYRAC	1 cut(s)	826
HindIII	AAGCTT	1 cut(s)	403
HpaII	CCGG	5 cut(s)	23, 96, 134, 250, 709
HphI	GGTGA	2 cut(s)	343, 707
Hpy166II	GTNNAC	3 cut(s)	259, 295, 826
Hpy188I	TCNGA	7 cut(s)	43, 142, 426, 884, 910, 1048, 1188
Hpy188III	TCNNGA	9 cut(s)	353, 634, 797, 1060, 1094, 1102, 1193, 1286, 1312
Hpy8I	GTNNAC	3 cut(s)	259, 295, 826
Hpy99I	CGWCG	2 cut(s)	77, 133
HpyAV	CCTTC	2 cut(s)	953, 1007
HpyCH4III	ACNGT	2 cut(s)	38, 1256
HpyCH4IV	ACGT	2 cut(s)	17, 291
HpyF10VI	GCNNNNNNNGC	4 cut(s)	658, 1036, 1160, 1277
HpyF3I	CTNAG	1 cut(s)	1139
HpySE526I	ACGT	2 cut(s)	17, 291
Hsp92I	GRCGYC	3 cut(s)	57, 131, 1316
Hsp92II	CATG	8 cut(s)	172, 452, 497, 561, 637, 933, 1150, 1226
HspAI	GCGC	2 cut(s)	57, 640
KasI	GGCGCC	1 cut(s)	56
Ksp22I	TGATCA	2 cut(s)	340, 799
Kzo9I	GATC	7 cut(s)	340, 349, 676, 799, 862, 1048, 1237
LmnI	GCTCC	1 cut(s)	1135
Lsp1109I	GCAGC	3 cut(s)	463, 1231, 1280
LweI	GCATC	3 cut(s)	463, 694, 860
MaeI	CTAG	3 cut(s)	1052, 1094, 1193
MaeII	ACGT	2 cut(s)	17, 291
MaeIII	GTNAC	3 cut(s)	64, 397, 1142
MalI	GATC	7 cut(s)	342, 351, 678, 801, 864, 1050, 1239
MboI	GATC	7 cut(s)	340, 349, 676, 799, 862, 1048, 1237
MboII	GAAGA	4 cut(s)	445, 509, 552, 1175
MhlI	GDGCHC	3 cut(s)	273, 462, 1140
MluCI	AATT	7 cut(s)	500, 628, 974, 981, 1196, 1200, 1304
Mly113I	GGCGCC	1 cut(s)	57
MlyI	GAGTC	8 cut(s)	146, 209, 409, 587, 923, 1050, 1075, 1198
MmeI	TCCRAC	3 cut(s)	120, 188, 862
MroXI	GAANNNNTTC	3 cut(s)	651, 1123, 1200
MseI	TTAA	3 cut(s)	980, 1199, 1307
MslI	CAYNNNNRTG	1 cut(s)	509
MspA1I	CMGCKG	1 cut(s)	1271
MspI	CCGG	5 cut(s)	23, 96, 134, 250, 709
MspR9I	CCNGG	2 cut(s)	693, 1250
Mva1269I	GAATGC	1 cut(s)	904
MvaI	CCWGG	2 cut(s)	693, 1250
MvnI	CGCG	1 cut(s)	489
MwoI	GCNNNNNNNGC	4 cut(s)	658, 1036, 1160, 1277
NarI	GGCGCC	1 cut(s)	57
NdeI	CATATG	3 cut(s)	663, 876, 994
NdeII	GATC	7 cut(s)	340, 349, 676, 799, 862, 1048, 1237
NlaIII	CATG	8 cut(s)	172, 452, 497, 561, 637, 933, 1150, 1226
NlaIV	GGNNCC	3 cut(s)	58, 271, 1040
NmeAIII	GCCGAG	1 cut(s)	148
NmuCI	GTSAC	2 cut(s)	64, 1142
NspI	RCATGY	3 cut(s)	452, 933, 1226
OliI	CACNNNNGTG	1 cut(s)	509
PagI	TCATGA	1 cut(s)	633
PciI	ACATGT	1 cut(s)	448
PcsI	WCGNNNNNNNCGW	3 cut(s)	14, 60, 288
PctI	GAATGC	1 cut(s)	904
PdmI	GAANNNNTTC	3 cut(s)	651, 1123, 1200
PfeI	GAWTC	3 cut(s)	356, 712, 769
PfoI	TCCNGGA	1 cut(s)	1248
PkrI	GCNGC	6 cut(s)	61, 121, 266, 478, 1221, 1270
PleI	GAGTC	8 cut(s)	145, 209, 409, 587, 922, 1050, 1075, 1197
PluTI	GGCGCC	1 cut(s)	60
PpsI	GAGTC	8 cut(s)	145, 209, 409, 587, 922, 1050, 1075, 1197
PpuMI	RGGWCCY	1 cut(s)	1246
PscI	ACATGT	1 cut(s)	448
PshBI	ATTAAT	2 cut(s)	1199, 1307
Psp124BI	GAGCTC	1 cut(s)	1140
Psp5II	RGGWCCY	1 cut(s)	1246
Psp6I	CCWGG	2 cut(s)	691, 1248
PspGI	CCWGG	2 cut(s)	691, 1248
PspN4I	GGNNCC	3 cut(s)	58, 271, 1040
PspOMI	GGGCCC	1 cut(s)	269
PspPI	GGNCC	6 cut(s)	269, 270, 1038, 1246, 1252, 1274
PspPPI	RGGWCCY	1 cut(s)	1246
PvuII	CAGCTG	1 cut(s)	1271
RsaI	GTAC	5 cut(s)	224, 563, 608, 1027, 1208
RsaNI	GTAC	5 cut(s)	223, 562, 607, 1026, 1207
RseI	CAYNNNNRTG	1 cut(s)	509
SacI	GAGCTC	1 cut(s)	1140
SaqAI	TTAA	3 cut(s)	980, 1199, 1307
SatI	GCNGC	6 cut(s)	60, 120, 265, 477, 1220, 1269
Sau3AI	GATC	7 cut(s)	340, 349, 676, 799, 862, 1048, 1237
Sau96I	GGNCC	6 cut(s)	269, 270, 1038, 1246, 1252, 1274
SchI	GAGTC	8 cut(s)	146, 209, 409, 587, 923, 1050, 1075, 1198
ScrFI	CCNGG	2 cut(s)	693, 1250
SduI	GDGCHC	3 cut(s)	273, 462, 1140
SfaNI	GCATC	3 cut(s)	463, 694, 860
SfcI	CTRYAG	1 cut(s)	528
SfoI	GGCGCC	1 cut(s)	58
SinI	GGWCC	3 cut(s)	1246, 1252, 1274
SmiMI	CAYNNNNRTG	1 cut(s)	509
SmlI	CTYRAG	2 cut(s)	680, 1060
SmoI	CTYRAG	2 cut(s)	680, 1060
Sse9I	AATT	7 cut(s)	500, 628, 974, 981, 1196, 1200, 1304
SsiI	CCGC	7 cut(s)	29, 60, 120, 157, 264, 267, 430
SspDI	GGCGCC	1 cut(s)	56
SspI	AATATT	1 cut(s)	1123
SspMI	CTAG	3 cut(s)	1052, 1094, 1193
SstI	GAGCTC	1 cut(s)	1140
StyD4I	CCNGG	2 cut(s)	691, 1248
TaaI	ACNGT	2 cut(s)	38, 1256
TaiI	ACGT	2 cut(s)	20, 294
TaqI	TCGA	2 cut(s)	8, 243
TasI	AATT	7 cut(s)	500, 628, 974, 981, 1196, 1200, 1304
TatI	WGTACW	2 cut(s)	606, 1206
TauI	GCSGC	3 cut(s)	62, 122, 267
TfiI	GAWTC	3 cut(s)	356, 712, 769
Tru1I	TTAA	3 cut(s)	980, 1199, 1307
Tru9I	TTAA	3 cut(s)	980, 1199, 1307
TscAI	CASTG	1 cut(s)	1147
TseFI	GTSAC	2 cut(s)	64, 1142
TseI	GCWGC	3 cut(s)	476, 1219, 1268
Tsp45I	GTSAC	2 cut(s)	64, 1142
TspDTI	ATGAA	5 cut(s)	510, 622, 650, 981, 1011
TspRI	CASTG	1 cut(s)	1147
VpaK11BI	GGWCC	3 cut(s)	1246, 1252, 1274
VspI	ATTAAT	2 cut(s)	1199, 1307
XapI	RAATTY	2 cut(s)	500, 974
XbaI	TCTAGA	2 cut(s)	1093, 1192
XceI	RCATGY	3 cut(s)	452, 933, 1226
XcmI	CCANNNNNNNNNTGG	1 cut(s)	175
XmnI	GAANNNNTTC	3 cut(s)	651, 1123, 1200
XspI	CTAG	3 cut(s)	1052, 1094, 1193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.