Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0010476

Physical Location & Seq

Genomic Coordinates Forward (+)

43242221 .. 43247915

Gene Structure 5695 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1358600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGGTTCGATAGGAACACCGCCTAGTGCGGAGAACGCCTCTGCCACCACTAACCCGGCCACCGCCGCATGCGACGCCGATAGAAAGCCTCAGGCCGGCGATGGATACCAACCTTTGGCCAACGAAATGACGCCGGAGTCGGAATTTATGAAAAAGCGCAAGTCGTCGATGCTTCCTTTGGAAGTCGGCACGCGCGTCATGTGCCGGTGGAGGGACAACAAGTACCACCCCGTGAAGGTCATCGAACGACGGAGAGTGCATTGCGGTGGGCCCAACGACTACGAGTATTACGTCCACTACACTGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAACTTGACCAACTAGATCTTGATTCAGTAGAGGCTGTAGTTGATGAGAAAGTGGAGGACAAGGTTACAAGCTTGAAAATGACTCGTCATCAGAAGCGGAAGATCGACGAGACACATGTAGAGGGCCATGAGGAACTTGATGCTGCCAGCTTGCGTGAACATGAAGAGTTTACAAAAGTGAAAAATATAGCAACCATAGAACTTGGAAGATATGAAATTGAGACATGGTACTTCTCCCCCTTTCCACCAGAATATAATGACTCTTTGAAGCTGTACTTTTGTGAGTTCTGCCTCAATTTCATGAAGCGCAAAGAACAGCTTCAAAGGCATATGAGGAAATGCGATCTCAAGCATCCCCCTGGTGATGAGATATACCGAAGTGGTACACTTTCTATGTTTGAGGTTGATGGAAAAAAGAACAAGGTTTATGGGCAGAATCTTTGTTATTTGGCGAAATTGTTTCTTGATCACAAGACCCTGTATTATGATGTTGACCTCTTTCTGTTTTATATTTTATGTGAATGTGATGATCGTGGATGCCATATGGTTGGATATTTTTCCAAGGAAAAACATTCAGAGGAATCTTATAACTTGGCATGTATACTCACCCTTCCTCCATATCAAAGAAAAGGCTATGGAAAATTTTTGATTGCCTTTTCATATGAACTCTCAAAGAAAGAAGGTAAAGTTGGCACGCCTGAAAGACCCCTCTCTGACCTAGGATTGCTGAGTTATAGAGGGTACTGGACCCGGGTGCTTCTCGACATCTTGAAAAAGCACAAGGGAAATATTTCAATCAAGGAGCTTAGTGACATGACAGCCATCAAGGCAGAGGATATATTGAACACCCTTCAGAGTCTTGAATTGATACAGTACAGGAAAGGGCAGCATGTCATCTGTGCAGACCCAAAGGTCCTGGATCGGCATCTAAAAGCAGCCGGTCGTGGGGGCCTCGAAGTCGATGTTAGCAAACTGATCTGGACGCCATATAAAGAACAAGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004402 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008080 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010224 GO:0010485 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0033554 GO:0034212 GO:0034641 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043543 GO:0043967 GO:0043981 GO:0043995 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0048580 GO:0048583 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051276 GO:0051716 GO:0061733 GO:0065007 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901564 GO:2000026 GO:2000028 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MOZ_SAS Tudor-knot

Protein Analysis

446

Amino Acids

51.61

Weight (kDa)

6.94

Isoelectric Point (pI)

40.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tudor-knot	PF11717	60 - 118	1.3e-20	RNA binding activity-knot of a chromodomain
zf-MYST	PF17772	171 - 225	4e-25	MYST family zinc finger domain
MOZ_SAS	PF01853	230 - 407	1.6e-86	MOZ/SAS family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09740 AT5G09740 AT5G64610
fragaria_vesca	FvH4_5g38850
malus_domestica	MD08G1173300.v1.1 MD15G1358600.v1.1
prunus_persica	Prupe.1G506200_v2.0.a1 Prupe.1G506200_v2.0.a1
pyrus_communis	pycom08g14790 pycom15g32100
rosa_chinensis	RchiOBHm_Chr7g0240841
rosa_laevigata	RLG00000000621
rosa_multiflora	Rmu_co8495669.1_g000001
rosa_roxburghii	Rroxscaffold_3G00219580
rosa_rugosa	Rorug07G0339400
rosa_samantha	Rh7AG493800 Rh7BG465700 Rh7CG512200 Rh7DG478900
rosa_wichuraiana	Rw0G010710 Rw7G041780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	921
AasI	GACNNNNNNGTC	2 cut(s)	136, 1244
AccB7I	CCANNNNNTGG	1 cut(s)	115
AccI	GTMKAC	1 cut(s)	934
AccII	CGCG	2 cut(s)	193, 195
AciI	CCGC	6 cut(s)	20, 29, 63, 66, 264, 430
AclWI	GGATC	1 cut(s)	1260
AcoI	YGGCCR	2 cut(s)	57, 117
AcsI	RAATTY	2 cut(s)	143, 974
AcuI	CTGAAG	1 cut(s)	1169
AcyI	GRCGYC	3 cut(s)	75, 131, 1316
AdeI	CACNNNGTG	1 cut(s)	232
AfaI	GTAC	6 cut(s)	224, 563, 608, 718, 1076, 1208
AfiI	CCNNNNNNNGG	5 cut(s)	95, 115, 211, 235, 1278
AflIII	ACRYGT	1 cut(s)	448
AgsI	TTSAA	8 cut(s)	310, 409, 601, 656, 1105, 1128, 1177, 1196
AjnI	CCWGG	2 cut(s)	691, 1248
AjuI	GAANNNNNNNTTGG	2 cut(s)	1005, 1037
AluBI	AGCT	5 cut(s)	405, 483, 604, 652, 1138
AluI	AGCT	5 cut(s)	405, 483, 604, 652, 1138
Alw26I	GTCTC	2 cut(s)	437, 548
AlwI	GGATC	1 cut(s)	1260
Ama87I	CYCGRG	1 cut(s)	1083
AoxI	GGCC	6 cut(s)	57, 93, 117, 269, 457, 1282
ApaI	GGGCCC	1 cut(s)	273
ApeKI	GCWGC	3 cut(s)	476, 1219, 1268
ApoI	RAATTY	2 cut(s)	143, 974
Asp700I	GAANNNNTTC	2 cut(s)	651, 1123
AspA2I	CCTAGG	1 cut(s)	1051
AspLEI	GCGC	3 cut(s)	159, 195, 642
AspS9I	GGNCC	6 cut(s)	269, 270, 457, 1080, 1246, 1282
AsuC2I	CCSGG	3 cut(s)	56, 1084, 1085
AsuHPI	GGTGA	3 cut(s)	343, 707, 931
AvaI	CYCGRG	1 cut(s)	1083
AvaII	GGWCC	2 cut(s)	1080, 1246
AvrII	CCTAGG	1 cut(s)	1051
AxyI	CCTNAGG	1 cut(s)	90
BaeGI	GKGCMC	1 cut(s)	273
BalI	TGGCCA	1 cut(s)	119
BanII	GRGCYC	1 cut(s)	273
BbvI	GCAGC	3 cut(s)	463, 1231, 1280
BccI	CCATC	3 cut(s)	95, 734, 1163
BciT130I	CCWGG	2 cut(s)	693, 1250
BciVI	GTATCC	1 cut(s)	98
BclI	TGATCA	1 cut(s)	799
BcnI	CCSGG	3 cut(s)	56, 1084, 1085
BcoDI	GTCTC	2 cut(s)	437, 548
BfaI	CTAG	3 cut(s)	24, 347, 1052
BfmI	CTRYAG	1 cut(s)	369
BfuI	GTATCC	1 cut(s)	98
BglI	GCCNNNNNGGC	1 cut(s)	1160
BglII	AGATCT	1 cut(s)	349
BisI	GCNGC	4 cut(s)	66, 477, 1220, 1269
BlnI	CCTAGG	1 cut(s)	1051
BlsI	GCNGC	4 cut(s)	67, 478, 1221, 1270
Bme1390I	CCNGG	5 cut(s)	56, 693, 1084, 1085, 1250
Bme18I	GGWCC	2 cut(s)	1080, 1246
BmeT110I	CYCGRG	1 cut(s)	1083
BmgT120I	GGNCC	6 cut(s)	269, 270, 457, 1080, 1246, 1282
BmiI	GGNNCC	3 cut(s)	271, 1082, 1283
BmrFI	CCNGG	5 cut(s)	56, 693, 1084, 1085, 1250
BmsI	GCATC	5 cut(s)	159, 463, 694, 860, 1267
BplI	GAGNNNNNCTC	2 cut(s)	23, 55
BpuEI	CTTGAG	1 cut(s)	665
BpuMI	CCSGG	3 cut(s)	56, 1084, 1085
BsaBI	GATNNNNATC	1 cut(s)	1257
BsaHI	GRCGYC	3 cut(s)	75, 131, 1316
BsaJI	CCNNGG	4 cut(s)	691, 894, 1051, 1083
BsaXI	ACNNNNNCTCC	2 cut(s)	931, 961
Bsc4I	CCNNNNNNNGG	5 cut(s)	95, 115, 211, 235, 1278
Bse118I	RCCGGY	3 cut(s)	95, 204, 1271
Bse1I	ACTGG	1 cut(s)	1082
Bse21I	CCTNAGG	1 cut(s)	90
Bse3DI	GCAATG	1 cut(s)	259
Bse8I	GATNNNNATC	1 cut(s)	1257
BseBI	CCWGG	2 cut(s)	693, 1250
BseDI	CCNNGG	4 cut(s)	691, 894, 1051, 1083
BseGI	GGATG	2 cut(s)	685, 875
BseJI	GATNNNNATC	1 cut(s)	1257
BseLI	CCNNNNNNNGG	5 cut(s)	95, 115, 211, 235, 1278
BseMI	GCAATG	1 cut(s)	259
BseMII	CTCAG	3 cut(s)	104, 294, 1052
BseNI	ACTGG	1 cut(s)	1082
BseSI	GKGCMC	1 cut(s)	273
BseXI	GCAGC	3 cut(s)	463, 1231, 1280
BsgI	GTGCAG	1 cut(s)	1254
Bsh1236I	CGCG	2 cut(s)	193, 195
Bsh1285I	CGRYCG	1 cut(s)	1276
BshFI	GGCC	6 cut(s)	59, 95, 119, 271, 459, 1284
BsiEI	CGRYCG	1 cut(s)	1276
BsiHKCI	CYCGRG	1 cut(s)	1083
BsiSI	CCGG	6 cut(s)	56, 96, 134, 205, 1084, 1272
BslFI	GGGAC	1 cut(s)	227
BslI	CCNNNNNNNGG	5 cut(s)	95, 115, 211, 235, 1278
BsmAI	GTCTC	2 cut(s)	437, 548
BsmFI	GGGAC	1 cut(s)	227
BsnI	GGCC	6 cut(s)	59, 95, 119, 271, 459, 1284
BsoBI	CYCGRG	1 cut(s)	1083
Bsp120I	GGGCCC	1 cut(s)	269
Bsp1286I	GDGCHC	1 cut(s)	273
Bsp143I	GATC	7 cut(s)	349, 435, 676, 799, 862, 1252, 1308
BspACI	CCGC	6 cut(s)	20, 29, 63, 66, 264, 430
BspANI	GGCC	6 cut(s)	59, 95, 119, 271, 459, 1284
BspCNI	CTCAG	3 cut(s)	103, 295, 1053
BspFNI	CGCG	2 cut(s)	193, 195
BspHI	TCATGA	1 cut(s)	633
BspLI	GGNNCC	3 cut(s)	271, 1082, 1283
BspPI	GGATC	1 cut(s)	1260
BsrDI	GCAATG	1 cut(s)	259
BsrFI	RCCGGY	3 cut(s)	95, 204, 1271
BsrI	ACTGG	1 cut(s)	1082
BssAI	RCCGGY	3 cut(s)	95, 204, 1271
BssECI	CCNNGG	4 cut(s)	691, 894, 1051, 1083
BssMI	GATC	7 cut(s)	349, 435, 676, 799, 862, 1252, 1308
BssNAI	GTATAC	1 cut(s)	935
BssNI	GRCGYC	3 cut(s)	75, 131, 1316
BssT1I	CCWWGG	2 cut(s)	894, 1051
Bst1107I	GTATAC	1 cut(s)	935
Bst2UI	CCWGG	2 cut(s)	693, 1250
Bst4CI	ACNGT	1 cut(s)	1206
Bst6I	CTCTTC	1 cut(s)	492
BstACI	GRCGYC	3 cut(s)	75, 131, 1316
BstC8I	GCNNGC	6 cut(s)	70, 97, 191, 481, 485, 1028
BstDEI	CTNAG	4 cut(s)	90, 303, 1061, 1139
BstF5I	GGATG	2 cut(s)	685, 875
BstFNI	CGCG	2 cut(s)	193, 195
BstHHI	GCGC	3 cut(s)	159, 195, 642
BstKTI	GATC	7 cut(s)	352, 438, 679, 802, 865, 1255, 1311
BstMAI	GTCTC	2 cut(s)	437, 548
BstMBI	GATC	7 cut(s)	349, 435, 676, 799, 862, 1252, 1308
BstMCI	CGRYCG	1 cut(s)	1276
BstMWI	GCNNNNNNNGC	6 cut(s)	35, 65, 74, 201, 658, 1160
BstNI	CCWGG	2 cut(s)	693, 1250
BstNSI	RCATGY	4 cut(s)	72, 452, 933, 1226
BstSCI	CCNGG	5 cut(s)	54, 691, 1082, 1083, 1248
BstSFI	CTRYAG	1 cut(s)	369
BstSLI	GKGCMC	1 cut(s)	273
BstUI	CGCG	2 cut(s)	193, 195
BstV1I	GCAGC	3 cut(s)	463, 1231, 1280
BstX2I	RGATCY	1 cut(s)	349
BstXI	CCANNNNNNTGG	1 cut(s)	881
BstYI	RGATCY	1 cut(s)	349
BstZ17I	GTATAC	1 cut(s)	935
Bsu36I	CCTNAGG	1 cut(s)	90
BsuI	GTATCC	1 cut(s)	98
BsuRI	GGCC	6 cut(s)	59, 95, 119, 271, 459, 1284
BtgZI	GCGATG	1 cut(s)	114
BtsCI	GGATG	2 cut(s)	685, 875
BtsIMutI	CAGTG	1 cut(s)	300
Cac8I	GCNNGC	6 cut(s)	70, 97, 191, 481, 485, 1028
CciI	TCATGA	1 cut(s)	633
CfoI	GCGC	3 cut(s)	159, 195, 642
Cfr10I	RCCGGY	3 cut(s)	95, 204, 1271
Cfr13I	GGNCC	6 cut(s)	269, 270, 457, 1080, 1246, 1282
Cfr9I	CCCGGG	1 cut(s)	1083
CseI	GACGC	4 cut(s)	83, 139, 184, 1324
Csp6I	GTAC	6 cut(s)	223, 562, 607, 717, 1075, 1207
CviQI	GTAC	6 cut(s)	223, 562, 607, 717, 1075, 1207
DdeI	CTNAG	4 cut(s)	90, 303, 1061, 1139
DpnI	GATC	7 cut(s)	351, 437, 678, 801, 864, 1254, 1310
DpnII	GATC	7 cut(s)	349, 435, 676, 799, 862, 1252, 1308
DraIII	CACNNNGTG	1 cut(s)	232
DrdI	GACNNNNNNGTC	2 cut(s)	136, 1244
DseDI	GACNNNNNNGTC	2 cut(s)	136, 1244
EaeI	YGGCCR	2 cut(s)	57, 117
Eam1104I	CTCTTC	1 cut(s)	492
EarI	CTCTTC	1 cut(s)	492
Eco130I	CCWWGG	2 cut(s)	894, 1051
Eco24I	GRGCYC	1 cut(s)	273
Eco47I	GGWCC	2 cut(s)	1080, 1246
Eco57I	CTGAAG	1 cut(s)	1169
Eco81I	CCTNAGG	1 cut(s)	90
Eco88I	CYCGRG	1 cut(s)	1083
EcoO109I	RGGNCCY	2 cut(s)	1246, 1282
EcoRII	CCWGG	2 cut(s)	691, 1248
EcoT14I	CCWWGG	2 cut(s)	894, 1051
EcoT38I	GRGCYC	1 cut(s)	273
ErhI	CCWWGG	2 cut(s)	894, 1051
FalI	AAGNNNNNCTT	4 cut(s)	593, 625, 636, 668
FaqI	GGGAC	1 cut(s)	227
FauNDI	CATATG	3 cut(s)	663, 876, 994
FbaI	TGATCA	1 cut(s)	799
FblI	GTMKAC	1 cut(s)	934
Fnu4HI	GCNGC	4 cut(s)	66, 477, 1220, 1269
FokI	GGATG	2 cut(s)	672, 882
FriOI	GRGCYC	1 cut(s)	273
Fsp4HI	GCNGC	4 cut(s)	66, 477, 1220, 1269
FspBI	CTAG	3 cut(s)	24, 347, 1052
GlaI	GCGC	3 cut(s)	158, 194, 641
GluI	GCNGC	4 cut(s)	66, 477, 1220, 1269
HaeIII	GGCC	6 cut(s)	59, 95, 119, 271, 459, 1284
HapII	CCGG	6 cut(s)	56, 96, 134, 205, 1084, 1272
HgaI	GACGC	4 cut(s)	83, 139, 184, 1324
HhaI	GCGC	3 cut(s)	159, 195, 642
Hin1I	GRCGYC	3 cut(s)	75, 131, 1316
Hin6I	GCGC	3 cut(s)	157, 193, 640
HinP1I	GCGC	3 cut(s)	157, 193, 640
HincII	GTYRAC	1 cut(s)	826
HindII	GTYRAC	1 cut(s)	826
HindIII	AAGCTT	1 cut(s)	403
HinfI	GANTC	7 cut(s)	137, 356, 415, 593, 769, 914, 1189
HpaII	CCGG	6 cut(s)	56, 96, 134, 205, 1084, 1272
HphI	GGTGA	3 cut(s)	343, 707, 931
Hpy166II	GTNNAC	6 cut(s)	295, 491, 504, 719, 826, 935
Hpy188I	TCNGA	5 cut(s)	142, 426, 910, 1048, 1188
Hpy188III	TCNNGA	7 cut(s)	353, 634, 797, 1094, 1102, 1193, 1312
Hpy8I	GTNNAC	6 cut(s)	295, 491, 504, 719, 826, 935
Hpy99I	CGWCG	4 cut(s)	77, 169, 252, 443
HpyAV	CCTTC	4 cut(s)	229, 953, 1007, 1193
HpyCH4III	ACNGT	1 cut(s)	1206
HpyCH4IV	ACGT	1 cut(s)	291
HpyCH4V	TGCA	2 cut(s)	259, 1235
HpyF10VI	GCNNNNNNNGC	6 cut(s)	35, 65, 74, 201, 658, 1160
HpyF3I	CTNAG	4 cut(s)	90, 303, 1061, 1139
HpySE526I	ACGT	1 cut(s)	291
Hsp92I	GRCGYC	3 cut(s)	75, 131, 1316
HspAI	GCGC	3 cut(s)	157, 193, 640
KroI	GCCGGC	1 cut(s)	95
KroNI	GCCGGC	1 cut(s)	97
Ksp22I	TGATCA	1 cut(s)	799
Kzo9I	GATC	7 cut(s)	349, 435, 676, 799, 862, 1252, 1308
LmnI	GCTCC	1 cut(s)	1135
Lsp1109I	GCAGC	3 cut(s)	463, 1231, 1280
LweI	GCATC	5 cut(s)	159, 463, 694, 860, 1267
MaeI	CTAG	3 cut(s)	24, 347, 1052
MaeII	ACGT	1 cut(s)	291
MaeIII	GTNAC	2 cut(s)	397, 1142
MalI	GATC	7 cut(s)	351, 437, 678, 801, 864, 1254, 1310
MboI	GATC	7 cut(s)	349, 435, 676, 799, 862, 1252, 1308
MboII	GAAGA	3 cut(s)	445, 509, 552
MflI	RGATCY	1 cut(s)	349
MhlI	GDGCHC	1 cut(s)	273
MlsI	TGGCCA	1 cut(s)	119
MluCI	AATT	6 cut(s)	143, 549, 628, 788, 974, 1196
MluNI	TGGCCA	1 cut(s)	119
MlyI	GAGTC	4 cut(s)	146, 409, 587, 1198
MmeI	TCCRAC	2 cut(s)	120, 862
Mox20I	TGGCCA	1 cut(s)	119
MroNI	GCCGGC	1 cut(s)	95
MroXI	GAANNNNTTC	2 cut(s)	651, 1123
MscI	TGGCCA	1 cut(s)	119
MslI	CAYNNNNRTG	1 cut(s)	264
Msp20I	TGGCCA	1 cut(s)	119
MspI	CCGG	6 cut(s)	56, 96, 134, 205, 1084, 1272
MspR9I	CCNGG	5 cut(s)	56, 693, 1084, 1085, 1250
MvaI	CCWGG	2 cut(s)	693, 1250
MvnI	CGCG	2 cut(s)	193, 195
MwoI	GCNNNNNNNGC	6 cut(s)	35, 65, 74, 201, 658, 1160
NaeI	GCCGGC	1 cut(s)	97
NciI	CCSGG	3 cut(s)	56, 1084, 1085
NdeI	CATATG	3 cut(s)	663, 876, 994
NdeII	GATC	7 cut(s)	349, 435, 676, 799, 862, 1252, 1308
NgoMIV	GCCGGC	1 cut(s)	95
NlaIV	GGNNCC	3 cut(s)	271, 1082, 1283
NmuCI	GTSAC	1 cut(s)	1142
NspI	RCATGY	4 cut(s)	72, 452, 933, 1226
PaeI	GCATGC	1 cut(s)	72
PagI	TCATGA	1 cut(s)	633
PciI	ACATGT	1 cut(s)	448
PcsI	WCGNNNNNNNCGW	2 cut(s)	192, 288
PdiI	GCCGGC	1 cut(s)	97
PdmI	GAANNNNTTC	2 cut(s)	651, 1123
PfeI	GAWTC	3 cut(s)	356, 769, 914
PflMI	CCANNNNNTGG	1 cut(s)	115
PfoI	TCCNGGA	1 cut(s)	1248
PkrI	GCNGC	4 cut(s)	67, 478, 1221, 1270
PleI	GAGTC	4 cut(s)	145, 409, 587, 1197
PpsI	GAGTC	4 cut(s)	145, 409, 587, 1197
PpuMI	RGGWCCY	1 cut(s)	1246
PscI	ACATGT	1 cut(s)	448
PsiI	TTATAA	1 cut(s)	921
Psp5II	RGGWCCY	1 cut(s)	1246
Psp6I	CCWGG	2 cut(s)	691, 1248
PspGI	CCWGG	2 cut(s)	691, 1248
PspN4I	GGNNCC	3 cut(s)	271, 1082, 1283
PspOMI	GGGCCC	1 cut(s)	269
PspPI	GGNCC	6 cut(s)	269, 270, 457, 1080, 1246, 1282
PspPPI	RGGWCCY	1 cut(s)	1246
PsuI	RGATCY	1 cut(s)	349
RsaI	GTAC	6 cut(s)	224, 563, 608, 718, 1076, 1208
RsaNI	GTAC	6 cut(s)	223, 562, 607, 717, 1075, 1207
RseI	CAYNNNNRTG	1 cut(s)	264
SatI	GCNGC	4 cut(s)	66, 477, 1220, 1269
Sau3AI	GATC	7 cut(s)	349, 435, 676, 799, 862, 1252, 1308
Sau96I	GGNCC	6 cut(s)	269, 270, 457, 1080, 1246, 1282
SchI	GAGTC	4 cut(s)	146, 409, 587, 1198
ScrFI	CCNGG	5 cut(s)	56, 693, 1084, 1085, 1250
SduI	GDGCHC	1 cut(s)	273
SfaNI	GCATC	5 cut(s)	159, 463, 694, 860, 1267
SfcI	CTRYAG	1 cut(s)	369
SinI	GGWCC	2 cut(s)	1080, 1246
SmaI	CCCGGG	1 cut(s)	1085
SmiMI	CAYNNNNRTG	1 cut(s)	264
SmlI	CTYRAG	1 cut(s)	680
SmoI	CTYRAG	1 cut(s)	680
SphI	GCATGC	1 cut(s)	72
Sse9I	AATT	6 cut(s)	143, 549, 628, 788, 974, 1196
SsiI	CCGC	6 cut(s)	20, 29, 63, 66, 264, 430
SspI	AATATT	1 cut(s)	1123
SspMI	CTAG	3 cut(s)	24, 347, 1052
StyD4I	CCNGG	5 cut(s)	54, 691, 1082, 1083, 1248
StyI	CCWWGG	2 cut(s)	894, 1051
TaaI	ACNGT	1 cut(s)	1206
TaiI	ACGT	1 cut(s)	294
TaqI	TCGA	7 cut(s)	8, 167, 243, 438, 1095, 1287, 1293
TasI	AATT	6 cut(s)	143, 549, 628, 788, 974, 1196
TatI	WGTACW	2 cut(s)	606, 1206
TauI	GCSGC	1 cut(s)	68
TfiI	GAWTC	3 cut(s)	356, 769, 914
TscAI	CASTG	1 cut(s)	307
TseFI	GTSAC	1 cut(s)	1142
TseI	GCWGC	3 cut(s)	476, 1219, 1268
Tsp45I	GTSAC	1 cut(s)	1142
TspDTI	ATGAA	7 cut(s)	164, 510, 561, 622, 650, 981, 1011
TspGWI	ACGGA	1 cut(s)	265
TspMI	CCCGGG	1 cut(s)	1083
TspRI	CASTG	1 cut(s)	307
Van91I	CCANNNNNTGG	1 cut(s)	115
VpaK11BI	GGWCC	2 cut(s)	1080, 1246
XapI	RAATTY	2 cut(s)	143, 974
XceI	RCATGY	4 cut(s)	72, 452, 933, 1226
XmaI	CCCGGG	1 cut(s)	1083
XmaJI	CCTAGG	1 cut(s)	1051
XmiI	GTMKAC	1 cut(s)	934
XmnI	GAANNNNTTC	2 cut(s)	651, 1123
XspI	CTAG	3 cut(s)	24, 347, 1052

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.