AT5G11380

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0007296
Physical Location & Seq
Forward (+)
3629988 .. 3633511
3524 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G11380.2

Sequence Viewer

Length: 2103 bp
ATGGGTTCGGCTTCGATTGGTTACCAATTCGGAATATCAGCTCGATTTTACGGCAATTTTAATCTGAGCTCAGATATTACTGTCTCCTCGCTTCCATGTAAACTTGATGTTTCCATAAAAAGCCTATTCTCAGCTCCAAGCTCCACTCACAAGGAATATTCAAATCGAGCTCGGGTATGTTCTTTGCCAAACACTGATGGATACTGCGATGAGAAATTTGAGACGCCAATACTAGACAGCATTGAAACTCCATTGCAGTTGAAGAATTTGAGTGTTAAGGAGTTGAAGTTATTAGCTGATGAAATCCGTACGGAGCTTCATTCTGTATTATGGAAGAAGACCCAAAAGTCTATGAATCCTAGCTTTGCTGCAATAGAGCTTACCCTTGCTCTGCATTATGTTTTTCGTGCCCCGGTTGACAATATATTGTGGGATGCTGTGGAACAAACATATGCACATAAGGTCTTGACACGACGTTGGTCTGCAATACCATCGAGACAAAACAGTGGTATTTCTGGGGTCACTTCTCGTTTGGAGAGTGAATATGATTCCTTTGGAACCGGGCATGGCTGCAACAGTATTTCTGCTGGGCTCGGATTAGCGGTTGCTCGAGATATGAAAGGAAAGAGGGACCGGGTTGTTGCTGTGATCGACAATGTGACAATAACTGCTGGTCAAGCATATGAGGCAATGAGCAATGCTGGTTACTTGGATTCTAATATGATTGTTATACTGAATGATAGCCGTCACTCTTTACATCCAAATATGGAGGAGGGATCCAAGGCATCCATCAGCGCACTTTCTAGCATCATGAGCAAAATCCAATCTAGCAAAGTTTTCCGGAAATTTAGAGAATTAGCCAAAGCTATGACGAAAAGAATTGGAAAGGGAATGTATGAATGGGCAGCCAAAGTCGATGAGTATGCTCGCGGTATGGTTGGACCAACAGGATCAACTCTCTTTGAAGAACTTGGTTTGTACTACATTGGTCCTGTTGATGGACACAACATTGAAGATCTAGTTTGTGTTCTCCGAGAAGTATCTTCTCTAGATTCAATGGGTCCTGTGTTGGTCCACGTGATCACAGAGGGAAACCGAGATGCAGAAACCGTAAAGAACATCATGGTCAAAGACAGACGCACTTACAGTGATTGCTTTGTTGAGGCTTTGGTGATGGAGGCAGAAAAGGATAGAGATATTGTTGTAGTTCATGCAGGAATGGAGATGGATCCGTCACTTCTTACATTTCAGGAGAGATTTCCAGACAGATTTTTCAATGTCGGAATGGCTGAACAGCATGCTGTCACATTCTCTGCTGGTCTTTCTTCTGGAGGTCTCAAGCCATTTTGTATTATTCCCTCTGCTTTTTTACAAAGAGCTTATGACCAGGTGGTCCATGATGTAGATCGGCAGAGAAAGGCGGTGCGATTTGTTATTACAAGCGCAGGGCTTGTTGGATCCGATGGTCCAGTGCAGTGTGGAGCTTTTGACATAGCTTTCATGTCATCCTTACCAAACATGATAGCCATGGCTCCAGCCGATGAGGATGAGCTTGTAAATATGGTTGCAACTGCTGCTTATGTCACTGACCGCCCAGTATGTTTCCGGTTCCCTAGAGGCTCCATCGTCAACATGAATTATCTTGTCCCCACTGGATTACCAATTGAAATCGGAAGAGGAAGAGTTCTCGTAGAAGGTCAAGATGTGGCTTTACTTGGTTATGGAGCGATGGTTCAGAATTGTCTTCATGCTCACTCGCTTCTCTCGAAACTCGGTTTGAACGTGACTGTAGCTGATGCAAGATTTTGCAAACCCCTAGACATCAAGCTTGTGCGTGATCTTTGTCAGAACCACAAATTCCTTATCACTGTCGAAGAAGGCTGTGTTGGAGGGTTTGGTTCTCATGTGGCGCAGTTCATAGCCCTCGATGGCCAGCTCGATGGGAATATCAAGTGGAGACCCATTGTGTTACCGGATGGCTACATAGAAGAAGCATCGCCTAGGGAGCAGCTTGCTCTTGCAGGGCTAACTGGACATCACATAGCAGCAACCGCTTTGAGTCTTTTGGGCCGAACTCGTGAAGCATTGCTTCTCATGAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00730 ko00900 ko01100 ko01110 ko01130 map00730 map00900 map01100 map01110 map01130
Pfam Domains
Protein Families
DXP_synthase_N Transket_pyr Transketolase_C

Protein Analysis

700

Amino Acids

76.64

Weight (kDa)

6.09

Isoelectric Point (pI)

38.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DXP_synthase_N PF13292 78 - 362 1.5e-78 1-deoxy-D-xylulose-5-phosphate synthase
Transket_pyr PF02779 381 - 541 1.9e-33 Transketolase, pyrimidine binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 346, 1391
AccII CGCG 1 cut(s) 930
AccIII TCCGGA 1 cut(s) 840
AciI CCGC 5 cut(s) 602, 930, 1421, 1591, 2052
AclWI GGATC 7 cut(s) 771, 784, 958, 1223, 1236, 1452, 1465
AcoI YGGCCR 1 cut(s) 1930
AcsI RAATTY 4 cut(s) 215, 265, 845, 1856
AcvI CACGTG 1 cut(s) 1078
AcyI GRCGYC 1 cut(s) 224
AfaI GTAC 2 cut(s) 310, 980
AfiI CCNNNNNNNGG 1 cut(s) 998
AjnI CCWGG 1 cut(s) 1386
AjuI GAANNNNNNNTTGG 2 cut(s) 1869, 1901
AloI GAACNNNNNNTCC 2 cut(s) 1716, 1748
Alw21I GWGCWC 2 cut(s) 71, 172
Alw26I GTCTC 5 cut(s) 88, 215, 490, 1340, 1951
AlwI GGATC 7 cut(s) 771, 784, 958, 1223, 1236, 1452, 1465
Ama87I CYCGRG 2 cut(s) 171, 609
Aor13HI TCCGGA 1 cut(s) 840
AoxI GGCC 2 cut(s) 1930, 2068
ApeKI GCWGC 6 cut(s) 368, 570, 905, 1574, 2008, 2045
ApoI RAATTY 4 cut(s) 215, 265, 845, 1856
AspA2I CCTAGG 1 cut(s) 2000
AspLEI GCGC 3 cut(s) 797, 1445, 1912
AspS9I GGNCC 8 cut(s) 631, 941, 989, 1061, 1072, 1393, 1466, 2068
AsuC2I CCSGG 3 cut(s) 413, 562, 635
AsuHPI GGTGA 1 cut(s) 1183
AvaI CYCGRG 2 cut(s) 171, 609
AvaII GGWCC 7 cut(s) 631, 941, 989, 1061, 1072, 1393, 1466
AvrII CCTAGG 1 cut(s) 2000
BaeGI GKGCMC 1 cut(s) 412
BalI TGGCCA 1 cut(s) 1932
BamHI GGATCC 3 cut(s) 776, 1228, 1457
BanII GRGCYC 3 cut(s) 71, 172, 594
BauI CACGAG 1 cut(s) 2076
BbrPI CACGTG 1 cut(s) 1078
BbsI GAAGAC 2 cut(s) 344, 1736
Bbv12I GWGCWC 2 cut(s) 71, 172
BbvI GCAGC 6 cut(s) 355, 557, 917, 1561, 2020, 2057
BceAI ACGGC 2 cut(s) 67, 729
BcgI CGANNNNNNTGC 4 cut(s) 474, 508, 905, 939
BciT130I CCWGG 1 cut(s) 1388
BciVI GTATCC 1 cut(s) 194
BclI TGATCA 1 cut(s) 1080
BcnI CCSGG 3 cut(s) 413, 562, 635
BcoDI GTCTC 5 cut(s) 88, 215, 490, 1340, 1951
BfmI CTRYAG 1 cut(s) 1788
BfuI GTATCC 1 cut(s) 194
BglII AGATCT 1 cut(s) 1015
BisI GCNGC 6 cut(s) 369, 571, 906, 1575, 2009, 2046
BlnI CCTAGG 1 cut(s) 2000
BlsI GCNGC 6 cut(s) 370, 572, 907, 1576, 2010, 2047
Bme1390I CCNGG 4 cut(s) 413, 562, 635, 1388
Bme18I GGWCC 7 cut(s) 631, 941, 989, 1061, 1072, 1393, 1466
BmeT110I CYCGRG 2 cut(s) 171, 609
BmgT120I GGNCC 8 cut(s) 631, 941, 989, 1061, 1072, 1393, 1466, 2068
BmiI GGNNCC 9 cut(s) 559, 632, 778, 1062, 1230, 1459, 1533, 1610, 1621
BmrFI CCNGG 4 cut(s) 413, 562, 635, 1388
BmrI ACTGGG 1 cut(s) 1589
BmsI GCATC 6 cut(s) 424, 794, 816, 1090, 1786, 2003
BmuI ACTGGG 1 cut(s) 1589
BoxI GACNNNNGTC 1 cut(s) 478
BpiI GAAGAC 2 cut(s) 344, 1736
BpmI CTGGAG 2 cut(s) 1350, 1518
BpuEI CTTGAG 1 cut(s) 1322
BpuMI CCSGG 3 cut(s) 413, 562, 635
BsaAI YACGTR 1 cut(s) 1078
BsaBI GATNNNNATC 1 cut(s) 1404
BsaHI GRCGYC 1 cut(s) 224
BsaI GGTCTC 2 cut(s) 1340, 1951
BsaJI CCNNGG 4 cut(s) 411, 780, 1527, 2000
BsaWI WCCGGW 3 cut(s) 840, 1605, 1972
BsaXI ACNNNNNCTCC 4 cut(s) 272, 302, 1716, 1746
Bsc4I CCNNNNNNNGG 1 cut(s) 998
Bse1I ACTGG 4 cut(s) 1469, 1595, 1657, 2035
Bse3DI GCAATG 4 cut(s) 251, 696, 703, 2084
Bse8I GATNNNNATC 1 cut(s) 1404
BseAI TCCGGA 1 cut(s) 840
BseBI CCWGG 1 cut(s) 1388
BseDI CCNNGG 4 cut(s) 411, 780, 1527, 2000
BseGI GGATG 6 cut(s) 439, 757, 785, 1505, 1552, 1981
BseJI GATNNNNATC 1 cut(s) 1404
BseLI CCNNNNNNNGG 1 cut(s) 998
BseMI GCAATG 4 cut(s) 251, 696, 703, 2084
BseMII CTCAG 3 cut(s) 56, 84, 144
BseNI ACTGG 4 cut(s) 1469, 1595, 1657, 2035
BseRI GAGGAG 2 cut(s) 76, 785
BseSI GKGCMC 1 cut(s) 412
BseXI GCAGC 6 cut(s) 355, 557, 917, 1561, 2020, 2057
BseYI CCCAGC 1 cut(s) 587
BsgI GTGCAG 1 cut(s) 1493
Bsh1236I CGCG 1 cut(s) 930
BshFI GGCC 2 cut(s) 1932, 2070
BsiHKAI GWGCWC 2 cut(s) 71, 172
BsiHKCI CYCGRG 2 cut(s) 171, 609
BsiSI CCGG 6 cut(s) 413, 561, 634, 841, 1606, 1973
BsiWI CGTACG 1 cut(s) 308
BslFI GGGAC 2 cut(s) 644, 1631
BslI CCNNNNNNNGG 1 cut(s) 998
BsmAI GTCTC 5 cut(s) 88, 215, 490, 1340, 1951
BsmBI CGTCTC 1 cut(s) 215
BsmFI GGGAC 2 cut(s) 644, 1631
BsnI GGCC 2 cut(s) 1932, 2070
Bso31I GGTCTC 2 cut(s) 1340, 1951
BsoBI CYCGRG 2 cut(s) 171, 609
Bsp1286I GDGCHC 4 cut(s) 71, 172, 412, 594
Bsp13I TCCGGA 1 cut(s) 840
Bsp143I GATC 9 cut(s) 648, 776, 950, 1015, 1080, 1228, 1405, 1457, 1837
Bsp19I CCATGG 1 cut(s) 1527
BspACI CCGC 5 cut(s) 602, 930, 1421, 1591, 2052
BspANI GGCC 2 cut(s) 1932, 2070
BspCNI CTCAG 3 cut(s) 57, 83, 143
BspEI TCCGGA 1 cut(s) 840
BspFNI CGCG 1 cut(s) 930
BspHI TCATGA 2 cut(s) 810, 2094
BspLI GGNNCC 9 cut(s) 559, 632, 778, 1062, 1230, 1459, 1533, 1610, 1621
BspPI GGATC 7 cut(s) 771, 784, 958, 1223, 1236, 1452, 1465
BspTNI GGTCTC 2 cut(s) 1340, 1951
BsrDI GCAATG 4 cut(s) 251, 696, 703, 2084
BsrI ACTGG 4 cut(s) 1469, 1595, 1657, 2035
BssECI CCNNGG 4 cut(s) 411, 780, 1527, 2000
BssMI GATC 9 cut(s) 648, 776, 950, 1015, 1080, 1228, 1405, 1457, 1837
BssNI GRCGYC 1 cut(s) 224
BssSI CACGAG 1 cut(s) 2076
BssT1I CCWWGG 3 cut(s) 780, 1527, 2000
Bst2BI CACGAG 1 cut(s) 2076
Bst2UI CCWGG 1 cut(s) 1388
Bst4CI ACNGT 7 cut(s) 82, 506, 578, 1111, 1148, 1789, 1870
Bst6I CTCTTC 2 cut(s) 1669, 1675
BstACI GRCGYC 1 cut(s) 224
BstAPI GCANNNNNTGC 1 cut(s) 1574
BstBAI YACGTR 1 cut(s) 1078
BstC8I GCNNGC 4 cut(s) 928, 1299, 1934, 2013
BstDEI CTNAG 3 cut(s) 65, 70, 130
BstDSI CCRYGG 1 cut(s) 1527
BstEII GGTNACC 1 cut(s) 20
BstF5I GGATG 6 cut(s) 439, 757, 785, 1505, 1552, 1981
BstFNI CGCG 1 cut(s) 930
BstHHI GCGC 3 cut(s) 797, 1445, 1912
BstKTI GATC 9 cut(s) 651, 779, 953, 1018, 1083, 1231, 1408, 1460, 1840
BstMAI GTCTC 5 cut(s) 88, 215, 490, 1340, 1951
BstMBI GATC 9 cut(s) 648, 776, 950, 1015, 1080, 1228, 1405, 1457, 1837
BstMWI GCNNNNNNNGC 6 cut(s) 677, 686, 813, 1574, 2005, 2051
BstNI CCWGG 1 cut(s) 1388
BstNSI RCATGY 1 cut(s) 1301
BstPAI GACNNNNGTC 1 cut(s) 478
BstPI GGTNACC 1 cut(s) 20
BstSCI CCNGG 4 cut(s) 411, 560, 633, 1386
BstSFI CTRYAG 1 cut(s) 1788
BstSLI GKGCMC 1 cut(s) 412
BstUI CGCG 1 cut(s) 930
BstV1I GCAGC 6 cut(s) 355, 557, 917, 1561, 2020, 2057
BstV2I GAAGAC 2 cut(s) 344, 1736
BstX2I RGATCY 4 cut(s) 776, 1015, 1228, 1457
BstXI CCANNNNNNTGG 1 cut(s) 1940
BstYI RGATCY 4 cut(s) 776, 1015, 1228, 1457
BsuI GTATCC 1 cut(s) 194
BsuRI GGCC 2 cut(s) 1932, 2070
BtgI CCRYGG 1 cut(s) 1527
BtgZI GCGATG 3 cut(s) 222, 1742, 1980
BtsCI GGATG 6 cut(s) 439, 757, 785, 1505, 1552, 1981
BtsI GCAGTG 1 cut(s) 1481
BtsIMutI CAGTG 8 cut(s) 192, 511, 1153, 1476, 1481, 1584, 1650, 1866
Cac8I GCNNGC 4 cut(s) 928, 1299, 1934, 2013
CciI TCATGA 2 cut(s) 810, 2094
CfoI GCGC 3 cut(s) 797, 1445, 1912
Cfr13I GGNCC 8 cut(s) 631, 941, 989, 1061, 1072, 1393, 1466, 2068
CseI GACGC 2 cut(s) 232, 1146
CsiI ACCWGGT 1 cut(s) 1386
Csp6I GTAC 2 cut(s) 309, 979
CviQI GTAC 2 cut(s) 309, 979
DdeI CTNAG 3 cut(s) 65, 70, 130
DpnI GATC 9 cut(s) 650, 778, 952, 1017, 1082, 1230, 1407, 1459, 1839
DpnII GATC 9 cut(s) 648, 776, 950, 1015, 1080, 1228, 1405, 1457, 1837
DrdI GACNNNNNNGTC 2 cut(s) 346, 1391
DseDI GACNNNNNNGTC 2 cut(s) 346, 1391
EaeI YGGCCR 1 cut(s) 1930
Eam1104I CTCTTC 2 cut(s) 1669, 1675
EarI CTCTTC 2 cut(s) 1669, 1675
Ecl136II GAGCTC 2 cut(s) 69, 170
Eco130I CCWWGG 3 cut(s) 780, 1527, 2000
Eco24I GRGCYC 3 cut(s) 71, 172, 594
Eco31I GGTCTC 2 cut(s) 1340, 1951
Eco47I GGWCC 7 cut(s) 631, 941, 989, 1061, 1072, 1393, 1466
Eco53kI GAGCTC 2 cut(s) 69, 170
Eco72I CACGTG 1 cut(s) 1078
Eco88I CYCGRG 2 cut(s) 171, 609
Eco91I GGTNACC 1 cut(s) 20
EcoICRI GAGCTC 2 cut(s) 69, 170
EcoO109I RGGNCCY 1 cut(s) 1061
EcoO65I GGTNACC 1 cut(s) 20
EcoRII CCWGG 1 cut(s) 1386
EcoT14I CCWWGG 3 cut(s) 780, 1527, 2000
EcoT38I GRGCYC 3 cut(s) 71, 172, 594
ErhI CCWWGG 3 cut(s) 780, 1527, 2000
Esp3I CGTCTC 1 cut(s) 215
FalI AAGNNNNNCTT 1 cut(s) 2073
FaqI GGGAC 2 cut(s) 644, 1631
FauNDI CATATG 2 cut(s) 451, 682
FbaI TGATCA 1 cut(s) 1080
Fnu4HI GCNGC 6 cut(s) 369, 571, 906, 1575, 2009, 2046
FokI GGATG 6 cut(s) 446, 744, 772, 1492, 1559, 1988
FriOI GRGCYC 3 cut(s) 71, 172, 594
Fsp4HI GCNGC 6 cut(s) 369, 571, 906, 1575, 2009, 2046
GlaI GCGC 3 cut(s) 796, 1444, 1911
GluI GCNGC 6 cut(s) 369, 571, 906, 1575, 2009, 2046
GsaI CCCAGC 1 cut(s) 591
GsuI CTGGAG 2 cut(s) 1350, 1518
HaeIII GGCC 2 cut(s) 1932, 2070
HapII CCGG 6 cut(s) 413, 561, 634, 841, 1606, 1973
HgaI GACGC 2 cut(s) 232, 1146
HhaI GCGC 3 cut(s) 797, 1445, 1912
Hin1I GRCGYC 1 cut(s) 224
Hin6I GCGC 3 cut(s) 795, 1443, 1910
HinP1I GCGC 3 cut(s) 795, 1443, 1910
HincII GTYRAC 2 cut(s) 418, 1630
HindII GTYRAC 2 cut(s) 418, 1630
HindIII AAGCTT 1 cut(s) 1826
HinfI GANTC 5 cut(s) 355, 548, 713, 1052, 2059
HpaII CCGG 6 cut(s) 413, 561, 634, 841, 1606, 1973
HphI GGTGA 1 cut(s) 1183
Hpy166II GTNNAC 4 cut(s) 101, 418, 1075, 1630
Hpy8I GTNNAC 4 cut(s) 101, 418, 1075, 1630
Hpy99I CGWCG 1 cut(s) 477
HpyAV CCTTC 2 cut(s) 1688, 1871
HpyCH4III ACNGT 7 cut(s) 82, 506, 578, 1111, 1148, 1789, 1870
HpyCH4IV ACGT 3 cut(s) 475, 1077, 1782
HpyF10VI GCNNNNNNNGC 6 cut(s) 677, 686, 813, 1574, 2005, 2051
HpyF3I CTNAG 3 cut(s) 65, 70, 130
HpySE526I ACGT 3 cut(s) 475, 1077, 1782
Hsp92I GRCGYC 1 cut(s) 224
HspAI GCGC 3 cut(s) 795, 1443, 1910
Kpn2I TCCGGA 1 cut(s) 840
Ksp22I TGATCA 1 cut(s) 1080
Kzo9I GATC 9 cut(s) 648, 776, 950, 1015, 1080, 1228, 1405, 1457, 1837
LmnI GCTCC 8 cut(s) 139, 146, 313, 1481, 1537, 1625, 1724, 2005
Lsp1109I GCAGC 6 cut(s) 355, 557, 917, 1561, 2020, 2057
LweI GCATC 6 cut(s) 424, 794, 816, 1090, 1786, 2003
MabI ACCWGGT 1 cut(s) 1386
MaeII ACGT 3 cut(s) 475, 1077, 1782
MalI GATC 9 cut(s) 650, 778, 952, 1017, 1082, 1230, 1407, 1459, 1839
MboI GATC 9 cut(s) 648, 776, 950, 1015, 1080, 1228, 1405, 1457, 1837
MfeI CAATTG 1 cut(s) 1662
MflI RGATCY 4 cut(s) 776, 1015, 1228, 1457
MhlI GDGCHC 4 cut(s) 71, 172, 412, 594
MlsI TGGCCA 1 cut(s) 1932
MluNI TGGCCA 1 cut(s) 1932
MlyI GAGTC 1 cut(s) 2068
MmeI TCCRAC 4 cut(s) 919, 1261, 1435, 1867
Mox20I TGGCCA 1 cut(s) 1932
MroI TCCGGA 1 cut(s) 840
MscI TGGCCA 1 cut(s) 1932
MseI TTAA 2 cut(s) 60, 276
Msp20I TGGCCA 1 cut(s) 1932
MspI CCGG 6 cut(s) 413, 561, 634, 841, 1606, 1973
MspR9I CCNGG 4 cut(s) 413, 562, 635, 1388
MunI CAATTG 1 cut(s) 1662
MvaI CCWGG 1 cut(s) 1388
MvnI CGCG 1 cut(s) 930
MwoI GCNNNNNNNGC 6 cut(s) 677, 686, 813, 1574, 2005, 2051
NciI CCSGG 3 cut(s) 413, 562, 635
NcoI CCATGG 1 cut(s) 1527
NdeI CATATG 2 cut(s) 451, 682
NdeII GATC 9 cut(s) 648, 776, 950, 1015, 1080, 1228, 1405, 1457, 1837
NlaIV GGNNCC 9 cut(s) 559, 632, 778, 1062, 1230, 1459, 1533, 1610, 1621
NmuCI GTSAC 7 cut(s) 520, 658, 746, 1233, 1303, 1582, 1783
NspI RCATGY 1 cut(s) 1301
PaeI GCATGC 1 cut(s) 1301
PaeR7I CTCGAG 1 cut(s) 609
PagI TCATGA 2 cut(s) 810, 2094
PcsI WCGNNNNNNNCGW 2 cut(s) 1763, 1779
PfeI GAWTC 4 cut(s) 355, 548, 713, 1052
Pfl23II CGTACG 1 cut(s) 308
PkrI GCNGC 6 cut(s) 370, 572, 907, 1576, 2010, 2047
PleI GAGTC 1 cut(s) 2067
PmaCI CACGTG 1 cut(s) 1078
PmlI CACGTG 1 cut(s) 1078
PpsI GAGTC 1 cut(s) 2067
Ppu21I YACGTR 1 cut(s) 1078
PpuMI RGGWCCY 1 cut(s) 1061
PshAI GACNNNNGTC 1 cut(s) 478
Psp124BI GAGCTC 2 cut(s) 71, 172
Psp5II RGGWCCY 1 cut(s) 1061
Psp6I CCWGG 1 cut(s) 1386
PspCI CACGTG 1 cut(s) 1078
PspEI GGTNACC 1 cut(s) 20
PspFI CCCAGC 1 cut(s) 587
PspGI CCWGG 1 cut(s) 1386
PspLI CGTACG 1 cut(s) 308
PspN4I GGNNCC 9 cut(s) 559, 632, 778, 1062, 1230, 1459, 1533, 1610, 1621
PspPI GGNCC 8 cut(s) 631, 941, 989, 1061, 1072, 1393, 1466, 2068
PspPPI RGGWCCY 1 cut(s) 1061
PsuI RGATCY 4 cut(s) 776, 1015, 1228, 1457
RsaI GTAC 2 cut(s) 310, 980
RsaNI GTAC 2 cut(s) 309, 979
SacI GAGCTC 2 cut(s) 71, 172
SaqAI TTAA 2 cut(s) 60, 276
SatI GCNGC 6 cut(s) 369, 571, 906, 1575, 2009, 2046
Sau3AI GATC 9 cut(s) 648, 776, 950, 1015, 1080, 1228, 1405, 1457, 1837
Sau96I GGNCC 8 cut(s) 631, 941, 989, 1061, 1072, 1393, 1466, 2068
SchI GAGTC 1 cut(s) 2068
ScrFI CCNGG 4 cut(s) 413, 562, 635, 1388
SduI GDGCHC 4 cut(s) 71, 172, 412, 594
SexAI ACCWGGT 1 cut(s) 1386
SfaNI GCATC 6 cut(s) 424, 794, 816, 1090, 1786, 2003
SfcI CTRYAG 1 cut(s) 1788
Sfr274I CTCGAG 1 cut(s) 609
SinI GGWCC 7 cut(s) 631, 941, 989, 1061, 1072, 1393, 1466
SlaI CTCGAG 1 cut(s) 609
SmlI CTYRAG 2 cut(s) 609, 1337
SmoI CTYRAG 2 cut(s) 609, 1337
SphI GCATGC 1 cut(s) 1301
SsiI CCGC 5 cut(s) 602, 930, 1421, 1591, 2052
SspI AATATT 1 cut(s) 158
SstI GAGCTC 2 cut(s) 71, 172
StyD4I CCNGG 4 cut(s) 411, 560, 633, 1386
StyI CCWWGG 3 cut(s) 780, 1527, 2000
TaaI ACNGT 7 cut(s) 82, 506, 578, 1111, 1148, 1789, 1870
TaiI ACGT 3 cut(s) 478, 1080, 1785
TatI WGTACW 1 cut(s) 978
TfiI GAWTC 4 cut(s) 355, 548, 713, 1052
Tru1I TTAA 2 cut(s) 60, 276
Tru9I TTAA 2 cut(s) 60, 276
TscAI CASTG 8 cut(s) 199, 511, 1153, 1476, 1481, 1591, 1657, 1873
TseFI GTSAC 7 cut(s) 520, 658, 746, 1233, 1303, 1582, 1783
TseI GCWGC 6 cut(s) 368, 570, 905, 1574, 2008, 2045
Tsp45I GTSAC 7 cut(s) 520, 658, 746, 1233, 1303, 1582, 1783
TspGWI ACGGA 3 cut(s) 296, 326, 1221
TspRI CASTG 8 cut(s) 199, 511, 1153, 1476, 1481, 1591, 1657, 1873
VpaK11BI GGWCC 7 cut(s) 631, 941, 989, 1061, 1072, 1393, 1466
XapI RAATTY 4 cut(s) 215, 265, 845, 1856
XbaI TCTAGA 1 cut(s) 1048
XceI RCATGY 1 cut(s) 1301
XhoI CTCGAG 1 cut(s) 609
XmaJI CCTAGG 1 cut(s) 2000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.