Prupe.1G472400_v2.0.a1

1-deoxy-D-xylulose-5-phosphate synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000901
Physical Location & Seq
Forward (+)
39278856 .. 39284326
5471 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G472400.2

Sequence Viewer

Length: 2163 bp
ATGGGTACTGCTTCTGCTGGGTACCCATCTGGAATTACTTCCCATTACCGTGGAAAGTTTGGGGCTTTTCCTCAAAAAGTCGAGTTCATTGGCTCTAATTTTCCACTTCATGTGGAATTTCCGAGAAGTAACTTGTACCCAAGGTCTGTTTCCACCACGACATCCAAGGAAATAGTGTGTCCAAAATGTTCTCTGCCTGATAGTGGCGAATTTTTCTCTGATGAAGTCTCGACACCCATTCTTGATTCGGTTGAAAATCCTATCCACCTGAAGAACTTGTCTCTTAAAGAACTGAAACAGTTATCTGATGAAATTCGTTCAGAGTTGTCATCAATAATGTCAAAAACAAGAAAGTCTTTTAAAGCTAGCTTGGGAGTAGTAGAGTTGACAGTTGCCATGCACCATGTTTTCCATGCTCCTGTGGACAAGATACTATGGGATGTTGTAGAACAAACCTACGTGCATAAAATTCTAACAGGAAGACGGGACCTCATACATACAGTGCGACGAAATAATGGTCTTTCTGGTTCTACATCTCAATCCGAAAGTGAATATGATCCATTTGGGGCAGGGCATGGGTGCAGCAGTGTTTCTGCTGGACTGGGCATGGCAATTGCACGGGATATTAAGGGAAAGCGGGAACGTATTGTCACAGTCATCAGCAATGGGTCAACAGTAGCTGGTCAGGTCTATGAGGCAATGGGTAATGCAGGTTATTTGGACTCAAATATGGTAGTAATTTTAAATGACAGCAGGCACTCTTTACACCCAATGATTGAGGAGGGCCCCAAGACAGCCATTAATGCTCTGTCTAGTACCCTAAGCAAGCTCCAGTCAAGTAAATCATTTCTGAAGTTTAGAGAAGTTGCTAAGGGTGTTACTAAAAGAATTGGTGGAGGTATGCATGAATTGGCAGCTAAAGTTGATGAGTATGCACGTGGTATGGTCGGTCCACTAGGATCAACTCTTTTTGAAGAGCTTGGATTGTATTACATTGGCCCTGTTGATGGACACAACATTGAAGACCTGATTTGCGTTCTACAGCAAGTGGCATCACTGAATTCAATGGGTCCTGTTCTGGTCCATGTGATAACGGAAGAAAATCGGGGACTGGAAAACAACCCAAAGAGTGGGGTGGCATACAGGCAGCAGGAAGGTTTGAGTAATTCTGATGATTTACCGTCCAAAGTTCGCCCTAGAACTTATAGCGACTGCTTTATGGAGGCTTTGGTTATGGAGGCAGAGAAAGACAAATATATTGTGACTGTTCATGCAGGAATGCATATGGAATCATCATTTCACCTATTCCGTGAAAGATTTCCCGACAAATTTTTTGATGTGGGAATGGCTGAGCAACATGCAGTTACTTTTTCTGCTGGTTTGTCACGTGGAGGATTAAAGCCATTTTGCATAATTCCTTCTGCATTTCTACAGAGAGCTTATGATCAGGTGGTTCATGATGTAGATCGGCAAAGAATTCCTGTGCGTTTTGTCATTACAAGTGCAGGATTGGTTGGATCTGATGGTCCCCTGCAATGTGGGGCATTCGATATAACATTTATGTCATGCTTACCAAATATGATTGTCATGGCACCGTCCAATGAGGTTGAGCTTGCCAACATGGTGGCCACTGCAGCCTACATTGATGATCTTCCAGTTTGCTTCCGATATCCTAGGGGAGCCGTAGTTGGAATGGAACATTCTATATGCAGTGGGACCCCTATTGAGATCGGAAAGGGGAAAATTCTCACAGAGGGTAAAGATGTGGCATTGCTTGGATATGGATCAATGGTTCGGAACTGCCTTAAGGCTCGGTCTCTTCTTTCAAAGCTTGGCATTGAGGTAACAGTTGCTGATGCAAGGTTCTGCAAGCCCTTAGACATCAACCTTCTTAGGCAGCTTTGTCGAAACCACTCATTTCTAATCACGGTCGAGGAAGGCTCTATTGGAGGATTTGGATCTCATGTTGCGCAGTTCTTTGCGCTTGATGGACGGCTTGATGGAAGCATTAAGTGGCGACCAATTGTTTTACCGGACAACTACATTGAGCATGCATCCCCAAACGAACAGCTAGCTATTGCTGGGCTGACCGGACATCACATAGCTGCAACAGCGTTAAGTCTGCTTGGCCGAAATCGTGAAGCCCTCCACTTAATGTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00730 ko00900 ko01100 ko01110 ko01130 map00730 map00900 map01100 map01110 map01130
Pfam Domains
Protein Families
DXP_synthase_N Transket_pyr Transketolase_C

Protein Analysis

721

Amino Acids

78.55

Weight (kDa)

6.61

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1971
Acc36I ACCTGC 1 cut(s) 701
Acc65I GGTACC 1 cut(s) 21
AccB1I GGYRCC 2 cut(s) 21, 1591
AccB7I CCANNNNNTGG 1 cut(s) 1130
AciI CCGC 1 cut(s) 637
AclWI GGATC 5 cut(s) 551, 967, 1525, 1792, 1966
AcoI YGGCCR 2 cut(s) 1626, 2128
AcsI RAATTY 8 cut(s) 116, 209, 312, 468, 1060, 1328, 1476, 1743
AcuI CTGAAG 2 cut(s) 290, 872
AcvI CACGTG 2 cut(s) 938, 1388
AfaI GTAC 4 cut(s) 7, 23, 137, 817
AfiI CCNNNNNNNGG 3 cut(s) 203, 1007, 1130
AflII CTTAAG 1 cut(s) 1805
AgsI TTSAA 5 cut(s) 254, 974, 1022, 1065, 1827
AjuI GAANNNNNNNTTGG 4 cut(s) 133, 165, 1929, 1961
AloI GAACNNNNNNTCC 2 cut(s) 1776, 1808
Alw26I GTCTC 3 cut(s) 232, 285, 1821
AlwI GGATC 5 cut(s) 551, 967, 1525, 1792, 1966
AlwNI CAGNNNCTG 2 cut(s) 680, 1853
AoxI GGCC 4 cut(s) 784, 997, 1626, 2128
ApaI GGGCCC 1 cut(s) 788
ApeKI GCWGC 6 cut(s) 582, 914, 1147, 1634, 1897, 2105
ApoI RAATTY 8 cut(s) 116, 209, 312, 468, 1060, 1328, 1476, 1743
ArsI GACNNNNNNTTYG 4 cut(s) 502, 534, 1316, 1348
AseI ATTAAT 1 cut(s) 801
Asp700I GAANNNNTTC 2 cut(s) 37, 1317
Asp718I GGTACC 1 cut(s) 21
AspA2I CCTAGG 1 cut(s) 1673
AspLEI GCGC 2 cut(s) 1972, 1984
AspS9I GGNCC 9 cut(s) 487, 784, 785, 950, 998, 1070, 1081, 1526, 1716
AsuHPI GGTGA 1 cut(s) 1292
AsuNHI GCTAGC 2 cut(s) 365, 2071
AvaII GGWCC 6 cut(s) 487, 950, 1070, 1081, 1526, 1716
AvrII CCTAGG 1 cut(s) 1673
BaeGI GKGCMC 1 cut(s) 788
BalI TGGCCA 1 cut(s) 1628
BanI GGYRCC 2 cut(s) 21, 1591
BanII GRGCYC 1 cut(s) 788
BbrPI CACGTG 2 cut(s) 938, 1388
BbsI GAAGAC 2 cut(s) 487, 1029
BbvI GCAGC 6 cut(s) 594, 926, 1159, 1646, 1909, 2092
BccI CCATC 5 cut(s) 34, 1001, 1517, 1982, 1994
BceAI ACGGC 2 cut(s) 1667, 2009
BcgI CGANNNNNNTGC 2 cut(s) 1886, 1920
BclI TGATCA 1 cut(s) 1444
BcoDI GTCTC 3 cut(s) 232, 285, 1821
BfaI CTAG 6 cut(s) 366, 813, 956, 1197, 1674, 2072
BfmI CTRYAG 3 cut(s) 1040, 1430, 1632
BfrI CTTAAG 1 cut(s) 1805
BfuAI ACCTGC 1 cut(s) 701
BisI GCNGC 6 cut(s) 583, 915, 1148, 1635, 1898, 2106
BlnI CCTAGG 1 cut(s) 1673
BlpI GCTNAGC 1 cut(s) 1350
BlsI GCNGC 6 cut(s) 584, 916, 1149, 1636, 1899, 2107
Bme18I GGWCC 6 cut(s) 487, 950, 1070, 1081, 1526, 1716
BmgT120I GGNCC 9 cut(s) 487, 784, 785, 950, 998, 1070, 1081, 1526, 1716
BmrI ACTGGG 1 cut(s) 611
BmsI GCATC 3 cut(s) 1061, 1846, 2063
BmtI GCTAGC 2 cut(s) 369, 2075
BmuI ACTGGG 1 cut(s) 611
BpiI GAAGAC 2 cut(s) 487, 1029
BplI GAGNNNNNCTC 2 cut(s) 1925, 1957
BpmI CTGGAG 1 cut(s) 815
Bpu10I CCTNAGC 2 cut(s) 821, 870
Bpu1102I GCTNAGC 1 cut(s) 1350
BsaAI YACGTR 3 cut(s) 460, 938, 1388
BsaBI GATNNNNATC 3 cut(s) 1464, 1783, 1957
BsaI GGTCTC 1 cut(s) 1821
BsaJI CCNNGG 4 cut(s) 49, 140, 165, 1673
BsaWI WCCGGW 2 cut(s) 2032, 2090
BsaXI ACNNNNNCTCC 2 cut(s) 1671, 1701
Bsc4I CCNNNNNNNGG 3 cut(s) 203, 1007, 1130
Bse1I ACTGG 4 cut(s) 606, 832, 1116, 1655
Bse3DI GCAATG 4 cut(s) 670, 705, 1541, 1769
Bse8I GATNNNNATC 3 cut(s) 1464, 1783, 1957
BseDI CCNNGG 4 cut(s) 49, 140, 165, 1673
BseGI GGATG 3 cut(s) 161, 445, 2054
BseJI GATNNNNATC 3 cut(s) 1464, 1783, 1957
BseLI CCNNNNNNNGG 3 cut(s) 203, 1007, 1130
BseMI GCAATG 4 cut(s) 670, 705, 1541, 1769
BseMII CTCAG 1 cut(s) 1341
BseNI ACTGG 4 cut(s) 606, 832, 1116, 1655
BseRI GAGGAG 1 cut(s) 794
BseSI GKGCMC 1 cut(s) 788
BseXI GCAGC 6 cut(s) 594, 926, 1159, 1646, 1909, 2092
BseYI CCCAGC 2 cut(s) 17, 2081
BsgI GTGCAG 2 cut(s) 601, 1524
Bsh1285I CGRYCG 1 cut(s) 1932
BshFI GGCC 4 cut(s) 786, 999, 1628, 2130
BshNI GGYRCC 2 cut(s) 21, 1591
BsiEI CGRYCG 1 cut(s) 1932
BsiSI CCGG 2 cut(s) 2033, 2091
BslFI GGGAC 4 cut(s) 500, 1122, 1512, 1729
BslI CCNNNNNNNGG 3 cut(s) 203, 1007, 1130
BsmAI GTCTC 3 cut(s) 232, 285, 1821
BsmFI GGGAC 4 cut(s) 500, 1122, 1512, 1729
BsmI GAATGC 2 cut(s) 1284, 1544
BsnI GGCC 4 cut(s) 786, 999, 1628, 2130
Bso31I GGTCTC 1 cut(s) 1821
Bsp120I GGGCCC 1 cut(s) 784
Bsp1286I GDGCHC 1 cut(s) 788
Bsp143I GATC 9 cut(s) 556, 959, 1444, 1465, 1517, 1648, 1728, 1784, 1958
Bsp1720I GCTNAGC 1 cut(s) 1350
BspACI CCGC 1 cut(s) 637
BspANI GGCC 4 cut(s) 786, 999, 1628, 2130
BspCNI CTCAG 1 cut(s) 1342
BspHI TCATGA 1 cut(s) 1456
BspMAI CTGCAG 1 cut(s) 1636
BspMI ACCTGC 1 cut(s) 701
BspOI GCTAGC 2 cut(s) 369, 2075
BspPI GGATC 5 cut(s) 551, 967, 1525, 1792, 1966
BspQI GCTCTTC 1 cut(s) 969
BspT107I GGYRCC 2 cut(s) 21, 1591
BspTI CTTAAG 1 cut(s) 1805
BspTNI GGTCTC 1 cut(s) 1821
BsrDI GCAATG 4 cut(s) 670, 705, 1541, 1769
BsrI ACTGG 4 cut(s) 606, 832, 1116, 1655
BssECI CCNNGG 4 cut(s) 49, 140, 165, 1673
BssMI GATC 9 cut(s) 556, 959, 1444, 1465, 1517, 1648, 1728, 1784, 1958
BssT1I CCWWGG 3 cut(s) 140, 165, 1673
Bst6I CTCTTC 2 cut(s) 969, 1824
BstAFI CTTAAG 1 cut(s) 1805
BstBAI YACGTR 3 cut(s) 460, 938, 1388
BstC8I GCNNGC 7 cut(s) 367, 755, 827, 1614, 1871, 2052, 2073
BstDEI CTNAG 5 cut(s) 821, 870, 1350, 1876, 1892
BstDSI CCRYGG 1 cut(s) 49
BstF5I GGATG 3 cut(s) 161, 445, 2054
BstHHI GCGC 2 cut(s) 1972, 1984
BstKTI GATC 9 cut(s) 559, 962, 1447, 1468, 1520, 1651, 1731, 1787, 1961
BstMAI GTCTC 3 cut(s) 232, 285, 1821
BstMBI GATC 9 cut(s) 556, 959, 1444, 1465, 1517, 1648, 1728, 1784, 1958
BstMCI CGRYCG 1 cut(s) 1932
BstMWI GCNNNNNNNGC 3 cut(s) 803, 1634, 2111
BstNSI RCATGY 2 cut(s) 1361, 2054
BstSFI CTRYAG 3 cut(s) 1040, 1430, 1632
BstSLI GKGCMC 1 cut(s) 788
BstV1I GCAGC 6 cut(s) 594, 926, 1159, 1646, 1909, 2092
BstV2I GAAGAC 2 cut(s) 487, 1029
BstX2I RGATCY 2 cut(s) 1517, 1958
BstXI CCANNNNNNTGG 2 cut(s) 50, 1624
BstYI RGATCY 2 cut(s) 1517, 1958
BsuRI GGCC 4 cut(s) 786, 999, 1628, 2130
BtgI CCRYGG 1 cut(s) 49
BtsCI GGATG 3 cut(s) 161, 445, 2054
BtsI GCAGTG 3 cut(s) 592, 1629, 1717
BtsIMutI CAGTG 5 cut(s) 507, 592, 1055, 1629, 1717
BveI ACCTGC 1 cut(s) 701
Cac8I GCNNGC 7 cut(s) 367, 755, 827, 1614, 1871, 2052, 2073
CaiI CAGNNNCTG 2 cut(s) 680, 1853
CciI TCATGA 1 cut(s) 1456
CfoI GCGC 2 cut(s) 1972, 1984
Cfr13I GGNCC 9 cut(s) 487, 784, 785, 950, 998, 1070, 1081, 1526, 1716
Csp6I GTAC 4 cut(s) 6, 22, 136, 816
CviQI GTAC 4 cut(s) 6, 22, 136, 816
DdeI CTNAG 5 cut(s) 821, 870, 1350, 1876, 1892
DpnI GATC 9 cut(s) 558, 961, 1446, 1467, 1519, 1650, 1730, 1786, 1960
DpnII GATC 9 cut(s) 556, 959, 1444, 1465, 1517, 1648, 1728, 1784, 1958
DraI TTTAAA 2 cut(s) 361, 744
EaeI YGGCCR 2 cut(s) 1626, 2128
Eam1104I CTCTTC 2 cut(s) 969, 1824
EarI CTCTTC 2 cut(s) 969, 1824
Eco130I CCWWGG 3 cut(s) 140, 165, 1673
Eco24I GRGCYC 1 cut(s) 788
Eco31I GGTCTC 1 cut(s) 1821
Eco32I GATATC 1 cut(s) 1670
Eco47I GGWCC 6 cut(s) 487, 950, 1070, 1081, 1526, 1716
Eco57I CTGAAG 2 cut(s) 290, 872
Eco72I CACGTG 2 cut(s) 938, 1388
EcoO109I RGGNCCY 5 cut(s) 487, 784, 785, 1070, 1716
EcoRI GAATTC 2 cut(s) 1060, 1476
EcoRV GATATC 1 cut(s) 1670
EcoT14I CCWWGG 3 cut(s) 140, 165, 1673
EcoT22I ATGCAT 3 cut(s) 906, 1284, 2056
EcoT38I GRGCYC 1 cut(s) 788
ErhI CCWWGG 3 cut(s) 140, 165, 1673
FalI AAGNNNNNCTT 2 cut(s) 340, 372
FaqI GGGAC 4 cut(s) 500, 1122, 1512, 1729
FauI CCCGC 1 cut(s) 630
FauNDI CATATG 1 cut(s) 1284
FbaI TGATCA 1 cut(s) 1444
Fnu4HI GCNGC 6 cut(s) 583, 915, 1148, 1635, 1898, 2106
FokI GGATG 3 cut(s) 148, 452, 2041
FriOI GRGCYC 1 cut(s) 788
Fsp4HI GCNGC 6 cut(s) 583, 915, 1148, 1635, 1898, 2106
FspBI CTAG 6 cut(s) 366, 813, 956, 1197, 1674, 2072
FspI TGCGCA 1 cut(s) 1971
GlaI GCGC 2 cut(s) 1971, 1983
GluI GCNGC 6 cut(s) 583, 915, 1148, 1635, 1898, 2106
GsaI CCCAGC 2 cut(s) 21, 2085
GsuI CTGGAG 1 cut(s) 815
HaeIII GGCC 4 cut(s) 786, 999, 1628, 2130
HapII CCGG 2 cut(s) 2033, 2091
HhaI GCGC 2 cut(s) 1972, 1984
Hin6I GCGC 2 cut(s) 1970, 1982
HinP1I GCGC 2 cut(s) 1970, 1982
HincII GTYRAC 2 cut(s) 387, 672
HindII GTYRAC 2 cut(s) 387, 672
HindIII AAGCTT 1 cut(s) 1829
HinfI GANTC 3 cut(s) 245, 722, 1289
HpaII CCGG 2 cut(s) 2033, 2091
HphI GGTGA 1 cut(s) 1292
Hpy166II GTNNAC 4 cut(s) 387, 424, 672, 953
Hpy188III TCNNGA 6 cut(s) 30, 229, 242, 1322, 1457, 2138
Hpy8I GTNNAC 4 cut(s) 387, 424, 672, 953
Hpy99I CGWCG 1 cut(s) 510
HpyAV CCTTC 4 cut(s) 1148, 1428, 1898, 1931
HpyCH4IV ACGT 4 cut(s) 459, 643, 937, 1387
HpyF10VI GCNNNNNNNGC 3 cut(s) 803, 1634, 2111
HpyF3I CTNAG 5 cut(s) 821, 870, 1350, 1876, 1892
HpySE526I ACGT 4 cut(s) 459, 643, 937, 1387
HspAI GCGC 2 cut(s) 1970, 1982
KflI GGGWCCC 1 cut(s) 1716
KpnI GGTACC 1 cut(s) 25
Ksp22I TGATCA 1 cut(s) 1444
Kzo9I GATC 9 cut(s) 556, 959, 1444, 1465, 1517, 1648, 1728, 1784, 1958
LguI GCTCTTC 1 cut(s) 969
LmnI GCTCC 3 cut(s) 421, 834, 1679
Lsp1109I GCAGC 6 cut(s) 594, 926, 1159, 1646, 1909, 2092
LweI GCATC 3 cut(s) 1061, 1846, 2063
MaeI CTAG 6 cut(s) 366, 813, 956, 1197, 1674, 2072
MaeII ACGT 4 cut(s) 459, 643, 937, 1387
MaeIII GTNAC 7 cut(s) 128, 649, 877, 1261, 1363, 1383, 1843
MalI GATC 9 cut(s) 558, 961, 1446, 1467, 1519, 1650, 1730, 1786, 1960
MboI GATC 9 cut(s) 556, 959, 1444, 1465, 1517, 1648, 1728, 1784, 1958
MboII GAAGA 7 cut(s) 283, 492, 986, 1034, 1109, 1643, 1811
MfeI CAATTG 2 cut(s) 612, 2022
MflI RGATCY 2 cut(s) 1517, 1958
MhlI GDGCHC 1 cut(s) 788
MlsI TGGCCA 1 cut(s) 1628
MluNI TGGCCA 1 cut(s) 1628
MlyI GAGTC 1 cut(s) 716
MmeI TCCRAC 2 cut(s) 1495, 1669
Mox20I TGGCCA 1 cut(s) 1628
Mph1103I ATGCAT 3 cut(s) 906, 1284, 2056
MroXI GAANNNNTTC 2 cut(s) 37, 1317
MscI TGGCCA 1 cut(s) 1628
MslI CAYNNNNRTG 1 cut(s) 48
Msp20I TGGCCA 1 cut(s) 1628
MspCI CTTAAG 1 cut(s) 1805
MspI CCGG 2 cut(s) 2033, 2091
MunI CAATTG 2 cut(s) 612, 2022
Mva1269I GAATGC 2 cut(s) 1284, 1544
MwoI GCNNNNNNNGC 3 cut(s) 803, 1634, 2111
NdeI CATATG 1 cut(s) 1284
NdeII GATC 9 cut(s) 556, 959, 1444, 1465, 1517, 1648, 1728, 1784, 1958
NheI GCTAGC 2 cut(s) 365, 2071
NmuCI GTSAC 3 cut(s) 649, 1261, 1383
NsbI TGCGCA 1 cut(s) 1971
NsiI ATGCAT 3 cut(s) 906, 1284, 2056
NspI RCATGY 2 cut(s) 1361, 2054
PaeI GCATGC 1 cut(s) 2054
PagI TCATGA 1 cut(s) 1456
PciSI GCTCTTC 1 cut(s) 969
PctI GAATGC 2 cut(s) 1284, 1544
PdmI GAANNNNTTC 2 cut(s) 37, 1317
PfeI GAWTC 2 cut(s) 245, 1289
PflMI CCANNNNNTGG 1 cut(s) 1130
PkrI GCNGC 6 cut(s) 584, 916, 1149, 1636, 1899, 2107
PleI GAGTC 1 cut(s) 716
PmaCI CACGTG 2 cut(s) 938, 1388
PmlI CACGTG 2 cut(s) 938, 1388
PpsI GAGTC 1 cut(s) 716
Ppu21I YACGTR 3 cut(s) 460, 938, 1388
PpuMI RGGWCCY 3 cut(s) 487, 1070, 1716
PshBI ATTAAT 1 cut(s) 801
Psp5II RGGWCCY 3 cut(s) 487, 1070, 1716
PspCI CACGTG 2 cut(s) 938, 1388
PspFI CCCAGC 2 cut(s) 17, 2081
PspOMI GGGCCC 1 cut(s) 784
PspPI GGNCC 9 cut(s) 487, 784, 785, 950, 998, 1070, 1081, 1526, 1716
PspPPI RGGWCCY 3 cut(s) 487, 1070, 1716
PstI CTGCAG 1 cut(s) 1636
PstNI CAGNNNCTG 2 cut(s) 680, 1853
PsuI RGATCY 2 cut(s) 1517, 1958
RsaI GTAC 4 cut(s) 7, 23, 137, 817
RsaNI GTAC 4 cut(s) 6, 22, 136, 816
RseI CAYNNNNRTG 1 cut(s) 48
SapI GCTCTTC 1 cut(s) 969
SatI GCNGC 6 cut(s) 583, 915, 1148, 1635, 1898, 2106
Sau3AI GATC 9 cut(s) 556, 959, 1444, 1465, 1517, 1648, 1728, 1784, 1958
Sau96I GGNCC 9 cut(s) 487, 784, 785, 950, 998, 1070, 1081, 1526, 1716
SchI GAGTC 1 cut(s) 716
SduI GDGCHC 1 cut(s) 788
SfaNI GCATC 3 cut(s) 1061, 1846, 2063
SfcI CTRYAG 3 cut(s) 1040, 1430, 1632
SinI GGWCC 6 cut(s) 487, 950, 1070, 1081, 1526, 1716
SmiMI CAYNNNNRTG 1 cut(s) 48
SmlI CTYRAG 1 cut(s) 1805
SmoI CTYRAG 1 cut(s) 1805
SphI GCATGC 1 cut(s) 2054
SsiI CCGC 1 cut(s) 637
SspMI CTAG 6 cut(s) 366, 813, 956, 1197, 1674, 2072
StyI CCWWGG 3 cut(s) 140, 165, 1673
TaiI ACGT 4 cut(s) 462, 646, 940, 1390
TaqI TCGA 5 cut(s) 81, 230, 1548, 1906, 1932
TaqII GACCGA 2 cut(s) 938, 1803
TfiI GAWTC 2 cut(s) 245, 1289
TscAI CASTG 5 cut(s) 507, 592, 1062, 1636, 1717
TseFI GTSAC 3 cut(s) 649, 1261, 1383
TseI GCWGC 6 cut(s) 582, 914, 1147, 1634, 1897, 2105
Tsp45I GTSAC 3 cut(s) 649, 1261, 1383
TspDTI ATGAA 7 cut(s) 76, 98, 237, 324, 921, 1259, 1445
TspGWI ACGGA 2 cut(s) 1109, 1298
TspRI CASTG 5 cut(s) 507, 592, 1062, 1636, 1717
Van91I CCANNNNNTGG 1 cut(s) 1130
Vha464I CTTAAG 1 cut(s) 1805
VpaK11BI GGWCC 6 cut(s) 487, 950, 1070, 1081, 1526, 1716
VspI ATTAAT 1 cut(s) 801
XapI RAATTY 8 cut(s) 116, 209, 312, 468, 1060, 1328, 1476, 1743
XceI RCATGY 2 cut(s) 1361, 2054
XmaJI CCTAGG 1 cut(s) 1673
XmnI GAANNNNTTC 2 cut(s) 37, 1317
XspI CTAG 6 cut(s) 366, 813, 956, 1197, 1674, 2072
Zsp2I ATGCAT 3 cut(s) 906, 1284, 2056
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.