Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000901

Physical Location & Seq

Genomic Coordinates Reverse (-)

7573560 .. 7576721

Gene Structure 3162 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G21500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGTCATATCAAACACAGATTAACAAATTCTCTCAAATGGCTCTCTCCGTATTTGCCTTTCCTTCTTACATAAATAGGAATCCTTCACTAAAATATCTTAAACCTTCTTCTATGTCTTCTACAAAATATTCAAAAGTAAGAGCAACAACATTTTCAGAGAAAGGTGAATATTATTCAAACAGACCACCAACTCCTTTATTGGACACAATCAACCATCCAATGCACATGAAAAATCTCTCCATCAAAGAACTCAAAGTTCTTTCGGACGAGTTGAGATCTGATGTTATTTTTAATGTTTCGAAAACTGGAGGACACTTGGGTTCGAATCTTGGTGTTGTTGAGCTCACCGTGGCCCTTCATTACATCTTCAATACTCCTCATGATAAGATCCTTTGGGATGTTGGTCATCAGTCTTATCCTCACAAGATTCTAACGGGAAGAAGAGGAAAGATGAAGACAATAAGGCAGACCAATGGCCTCTCCGGCTACACCAAGCGAAGAGAGAGTGAGCATGACTCTTTTGGCACCGGGCACAGTTCGACCACACTATCTGCAGGCTTAGGGATGGCTGTAGGGAGGGATTTGAAGGGGATGAACAACAGCGTGGTTTCGGTTATAGGCGATGGTGCTATGACAGCTGGACAAGCTTATGAAGCAATGAACAATGCTGGCTACTTACACTCCAACATGATTGTGATTCTCAACGACAACAAACAAGTATCTTTGCCTACTGCTAACTTGGATGGACCAACTCAACCTGTTGGAGCTCTGAGCTGTGCTCTTAGTAGGCTGCAATCTAATTGTGGAATGATTAGAGAGACTAGTTCAACACTGTTTGAAGAACTTGGTTTTCACTATGTTGGTCCAGTTGATGGACACAACATAGATGATCTGGTCTCCATTCTTGAAACATTAAAGAGCACCAAAACCATAGGACCGGTTCTTATCCATGTCGTGACTGAGAAAGGTCGTGGATATCCTTACGCAGAGAGAGCTGATGACAAGTATCATGTTTTAAAATTTGATCCAGAAACAGGTAAACAGTTCAAAAATATTTCCAAGACTCAGTCTTACACTTCCTGTTTTGTGGAGGCCTTGATTGCAGAAGCAGAGGCAGACAAAGATATTGTTGCCATTCATGCAGCCATGGGAGGTGGAACCATGTTGAATCTCTTCGAAAGCCGCTTTCCTACAAGGTGTTTCGATGTCGGCATAGCAGAACAACATGCAGTTACCTTCGCTGCTGGTCTTGCTTGCGAAGGACTTAAGCCCTTTTGTACAATCTACTCATCTTTCATGCAACGGGCATATGATCAAGTTGTACATGATGTTGATCTACAGAAACTGCCTGTGAGATTTGCAATAGATAGAGCAGGACTTATGGGAGCAGATGGTCCAACACATTGTGGAGCATTTGATGTGACGTTTATGGCATGTCTACCAAACATGATAGTAATGGCTCCATCTGATGAAGCAGAGCTTTTTAACATGGTTGCAACCGCTGCAGCTATTGATGACCGTCCTTCTTGCTTTCGATATCATAGAGGAAATGGTATTGGTGTTTCACTTCCTCCTGGTAACAAAGGTGTCCCTCTTCAGATTGGGAGAGGTAGGATACTAAGGGACGGCGAGAGGGTTGCGCTTTTGGGCTATGGATCAGCGGTGCAAAGATGTTTAGAGGCTGCATCTATGCTAAGCGAACGCGGATTAAAGATAACAGTAGCGGATGCAAGATTCTGTAAGCCGTTAGATGTTGCTCTCATTCGTAGCTTAGCTAAATCACACGAGGTTTTGATCACGGTTGAAGAAGGTTCCATTGGAGGATTTGGATCGCATGTGGTACAATTTCTTGCACTTGATGGCCTTCTTGATGGAAAGCTCAAGGTATATCGAACATGGATCACCAATGGATCAACTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006081 GO:0006082 GO:0006090 GO:0006629 GO:0006644 GO:0006720 GO:0006725 GO:0006778 GO:0006779 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0008654 GO:0008661 GO:0009058 GO:0009240 GO:0009507 GO:0009536 GO:0009987 GO:0015994 GO:0015995 GO:0016740 GO:0016744 GO:0018130 GO:0019288 GO:0019438 GO:0019637 GO:0019682 GO:0019752 GO:0032787 GO:0033013 GO:0033014 GO:0034641 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0046490 GO:0051186 GO:0051188 GO:0071704 GO:0090407 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00730 ko00900 ko01100 ko01110 ko01130 map00730 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

DXP_synthase_N Transket_pyr Transketolase_C

Protein Analysis

640

Amino Acids

69.71

Weight (kDa)

8.17

Isoelectric Point (pI)

35.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DXP_synthase_N	PF13292	67 - 267	4.8e-84	1-deoxy-D-xylulose-5-phosphate synthase
DXP_synthase_N	PF13292	275 - 320	5.3e-12	1-deoxy-D-xylulose-5-phosphate synthase
Transket_pyr	PF02779	356 - 517	2.2e-48	Transketolase, pyrimidine binding domain
Transketolase_C	PF02780	535 - 631	8.7e-26	Transketolase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000901)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21500 AT3G21500 AT3G21500 AT4G15560
fragaria_vesca	FvH4_1g19340 FvH4_1g19340 FvH4_1g19340 FvH4_1g19340 FvH4_4g16950 FvH4_4g16950 FvH4_4g16950
malus_domestica	MD01G1041300.v1.1 MD13G1175400.v1.1 MD15G1309900.v1.1 MD16G1177200.v1.1
prunus_persica	Prupe.1G144100_v2.0.a1 Prupe.1G144100_v2.0.a1 Prupe.1G144100_v2.0.a1 Prupe.1G472400_v2.0.a1 Prupe.1G472400_v2.0.a1 Prupe.6G204700_v2.0.a1
pyrus_communis	pycom01g06900 pycom01g06910 pycom04g12340 pycom13g15130 pycom15g10740 pycom15g27390 pycom16g14880
rosa_chinensis	RchiOBHm_Chr2g0110711 RchiOBHm_Chr4g0403671 RchiOBHm_Chr4g0403701 RchiOBHm_Chr4g0420531
rosa_laevigata	RLG00000007753 RLG00000008956 RLG00000008960 RLG00000017835
rosa_multiflora	Rmu_co8068784.1_g000001 Rmu_sc0000389.1_g000047 Rmu_sc0001496.1_g000014 Rmu_sc0002248.1_g000052 Rmu_sc0004115.1_g000015
rosa_roxburghii	Rroxscaffold_2G00133000 Rroxscaffold_5G00348270 Rroxscaffold_5G00348360 Rroxscaffold_5G00363150
rosa_rugosa	Rorug02G0169200 Rorug04G0045300 Rorug04G0164800
rosa_samantha	Rh2BG231400 Rh2CG223700 Rh2DG227600 Rh4AG120600 Rh4AG120700 Rh4BG113400 Rh4BG113500 Rh4BG113700 Rh4BG113800 Rh4BG229100 Rh4CG129000 Rh4DG112700 Rh4DG113600
rosa_wichuraiana	Rw2G017080 Rw4G009750 Rw4G009820 Rw4G019540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	524
AccB7I	CCANNNNNTGG	1 cut(s)	872
AccI	GTMKAC	1 cut(s)	1438
AccII	CGCG	1 cut(s)	1704
AciI	CCGC	5 cut(s)	1183, 1500, 1661, 1704, 1724
AclWI	GGATC	6 cut(s)	382, 1019, 1663, 1837, 1907, 1918
AcsI	RAATTY	2 cut(s)	26, 1019
AcuI	CTGAAG	1 cut(s)	1580
AdeI	CACNNNGTG	1 cut(s)	1406
AfaI	GTAC	3 cut(s)	1279, 1323, 1842
AfiI	CCNNNNNNNGG	2 cut(s)	872, 1034
AflII	CTTAAG	1 cut(s)	1265
AgeI	ACCGGT	1 cut(s)	937
AhlI	ACTAGT	1 cut(s)	821
AjnI	CCWGG	1 cut(s)	1573
AjuI	GAANNNNNNNTTGG	2 cut(s)	1800, 1832
Alw21I	GWGCWC	4 cut(s)	345, 769, 781, 923
Alw26I	GTCTC	2 cut(s)	812, 901
AlwI	GGATC	6 cut(s)	382, 1019, 1663, 1837, 1907, 1918
AlwNI	CAGNNNCTG	1 cut(s)	1345
AoxI	GGCC	4 cut(s)	351, 475, 1092, 1861
ApeKI	GCWGC	6 cut(s)	790, 1142, 1241, 1502, 1505, 1682
ApoI	RAATTY	2 cut(s)	26, 1019
AsiGI	ACCGGT	1 cut(s)	937
Asp700I	GAANNNNTTC	1 cut(s)	1172
AspLEI	GCGC	1 cut(s)	1642
AspS9I	GGNCC	5 cut(s)	352, 746, 863, 935, 1394
AsuC2I	CCSGG	1 cut(s)	529
AsuHPI	GGTGA	3 cut(s)	176, 337, 1894
AsuII	TTCGAA	3 cut(s)	299, 323, 1176
AvaII	GGWCC	4 cut(s)	746, 863, 935, 1394
BaeGI	GKGCMC	1 cut(s)	534
BanI	GGYRCC	1 cut(s)	524
BanII	GRGCYC	2 cut(s)	345, 769
BauI	CACGAG	1 cut(s)	1784
BbsI	GAAGAC	2 cut(s)	108, 461
Bbv12I	GWGCWC	4 cut(s)	345, 769, 781, 923
BbvI	GCAGC	6 cut(s)	777, 1154, 1228, 1489, 1517, 1669
BceAI	ACGGC	2 cut(s)	1642, 1729
BcgI	CGANNNNNNTGC	2 cut(s)	1619, 1653
BciT130I	CCWGG	1 cut(s)	1575
BciVI	GTATCC	1 cut(s)	1608
BclI	TGATCA	2 cut(s)	1312, 1794
BcnI	CCSGG	1 cut(s)	529
BcoDI	GTCTC	2 cut(s)	812, 901
BcuI	ACTAGT	1 cut(s)	821
BfaI	CTAG	2 cut(s)	822, 1917
BfmI	CTRYAG	4 cut(s)	552, 570, 1337, 1503
BfrI	CTTAAG	1 cut(s)	1265
BfuI	GTATCC	1 cut(s)	1608
BglI	GCCNNNNNGGC	1 cut(s)	483
BglII	AGATCT	1 cut(s)	275
BisI	GCNGC	7 cut(s)	791, 1143, 1183, 1242, 1503, 1506, 1683
BlpI	GCTNAGC	2 cut(s)	1694, 1771
BlsI	GCNGC	7 cut(s)	792, 1144, 1184, 1243, 1504, 1507, 1684
Bme1390I	CCNGG	2 cut(s)	529, 1575
Bme18I	GGWCC	4 cut(s)	746, 863, 935, 1394
BmgT120I	GGNCC	5 cut(s)	352, 746, 863, 935, 1394
BmiI	GGNNCC	4 cut(s)	526, 1159, 1461, 1813
BmrFI	CCNGG	2 cut(s)	529, 1575
BmsI	GCATC	2 cut(s)	1694, 1717
BpiI	GAAGAC	2 cut(s)	108, 461
BplI	GAGNNNNNCTC	4 cut(s)	500, 532, 763, 795
BpmI	CTGGAG	1 cut(s)	327
Bpu10I	CCTNAGC	1 cut(s)	559
Bpu1102I	GCTNAGC	2 cut(s)	1694, 1771
Bpu14I	TTCGAA	3 cut(s)	299, 323, 1176
BpuEI	CTTGAG	1 cut(s)	1865
BpuMI	CCSGG	1 cut(s)	529
BsaBI	GATNNNNATC	2 cut(s)	1332, 1828
BsaI	GGTCTC	1 cut(s)	901
BsaJI	CCNNGG	2 cut(s)	348, 1146
BsaWI	WCCGGW	1 cut(s)	937
BsaXI	ACNNNNNCTCC	2 cut(s)	665, 695
Bsc4I	CCNNNNNNNGG	2 cut(s)	872, 1034
Bse118I	RCCGGY	1 cut(s)	937
Bse1I	ACTGG	2 cut(s)	310, 866
Bse3DI	GCAATG	1 cut(s)	663
Bse8I	GATNNNNATC	2 cut(s)	1332, 1828
BseBI	CCWGG	1 cut(s)	1575
BseDI	CCNNGG	2 cut(s)	348, 1146
BseGI	GGATG	6 cut(s)	214, 403, 570, 597, 748, 1732
BseJI	GATNNNNATC	2 cut(s)	1332, 1828
BseLI	CCNNNNNNNGG	2 cut(s)	872, 1034
BseMI	GCAATG	1 cut(s)	663
BseMII	CTCAG	3 cut(s)	761, 951, 1079
BseNI	ACTGG	2 cut(s)	310, 866
BseRI	GAGGAG	1 cut(s)	366
BseSI	GKGCMC	1 cut(s)	534
BseXI	GCAGC	6 cut(s)	777, 1154, 1228, 1489, 1517, 1669
Bsh1236I	CGCG	1 cut(s)	1704
BshFI	GGCC	4 cut(s)	353, 477, 1094, 1863
BshNI	GGYRCC	1 cut(s)	524
BshTI	ACCGGT	1 cut(s)	937
BsiHKAI	GWGCWC	4 cut(s)	345, 769, 781, 923
BsiSI	CCGG	3 cut(s)	483, 528, 938
BslFI	GGGAC	2 cut(s)	1574, 1637
BslI	CCNNNNNNNGG	2 cut(s)	872, 1034
BsmAI	GTCTC	2 cut(s)	812, 901
BsmFI	GGGAC	2 cut(s)	1574, 1637
BsnI	GGCC	4 cut(s)	353, 477, 1094, 1863
Bso31I	GGTCTC	1 cut(s)	901
Bsp119I	TTCGAA	3 cut(s)	299, 323, 1176
Bsp1286I	GDGCHC	5 cut(s)	345, 534, 769, 781, 923
Bsp1407I	TGTACA	2 cut(s)	1277, 1321
Bsp1720I	GCTNAGC	2 cut(s)	1694, 1771
Bsp19I	CCATGG	1 cut(s)	1146
BspACI	CCGC	5 cut(s)	1183, 1500, 1661, 1704, 1724
BspANI	GGCC	4 cut(s)	353, 477, 1094, 1863
BspCNI	CTCAG	3 cut(s)	762, 952, 1078
BspFNI	CGCG	1 cut(s)	1704
BspHI	TCATGA	1 cut(s)	379
BspLI	GGNNCC	4 cut(s)	526, 1159, 1461, 1813
BspMAI	CTGCAG	2 cut(s)	556, 1507
BspPI	GGATC	6 cut(s)	382, 1019, 1663, 1837, 1907, 1918
BspT104I	TTCGAA	3 cut(s)	299, 323, 1176
BspT107I	GGYRCC	1 cut(s)	524
BspTI	CTTAAG	1 cut(s)	1265
BspTNI	GGTCTC	1 cut(s)	901
BsrDI	GCAATG	1 cut(s)	663
BsrFI	RCCGGY	1 cut(s)	937
BsrGI	TGTACA	2 cut(s)	1277, 1321
BsrI	ACTGG	2 cut(s)	310, 866
BssAI	RCCGGY	1 cut(s)	937
BssECI	CCNNGG	2 cut(s)	348, 1146
BssSI	CACGAG	1 cut(s)	1784
BssT1I	CCWWGG	1 cut(s)	1146
Bst2BI	CACGAG	1 cut(s)	1784
Bst2UI	CCWGG	1 cut(s)	1575
Bst4CI	ACNGT	7 cut(s)	349, 536, 834, 1044, 1520, 1720, 1801
Bst6I	CTCTTC	4 cut(s)	436, 493, 1178, 1599
BstAFI	CTTAAG	1 cut(s)	1265
BstAPI	GCANNNNNTGC	1 cut(s)	1502
BstAUI	TGTACA	2 cut(s)	1277, 1321
BstBI	TTCGAA	3 cut(s)	299, 323, 1176
BstC8I	GCNNGC	3 cut(s)	556, 670, 1255
BstDEI	CTNAG	8 cut(s)	559, 770, 782, 960, 1065, 1619, 1694, 1771
BstDSI	CCRYGG	2 cut(s)	348, 1146
BstF5I	GGATG	6 cut(s)	214, 403, 570, 597, 748, 1732
BstFNI	CGCG	1 cut(s)	1704
BstHHI	GCGC	1 cut(s)	1642
BstMAI	GTCTC	2 cut(s)	812, 901
BstMWI	GCNNNNNNNGC	9 cut(s)	483, 635, 644, 653, 992, 1100, 1139, 1250, 1502
BstNI	CCWGG	1 cut(s)	1575
BstNSI	RCATGY	3 cut(s)	1229, 1437, 1838
BstSCI	CCNGG	2 cut(s)	527, 1573
BstSFI	CTRYAG	4 cut(s)	552, 570, 1337, 1503
BstSLI	GKGCMC	1 cut(s)	534
BstUI	CGCG	1 cut(s)	1704
BstV1I	GCAGC	6 cut(s)	777, 1154, 1228, 1489, 1517, 1669
BstV2I	GAAGAC	2 cut(s)	108, 461
BstX2I	RGATCY	2 cut(s)	275, 387
BstYI	RGATCY	2 cut(s)	275, 387
BsuI	GTATCC	1 cut(s)	1608
BsuRI	GGCC	4 cut(s)	353, 477, 1094, 1863
BtgI	CCRYGG	2 cut(s)	348, 1146
BtgZI	GCGATG	1 cut(s)	636
BtsCI	GGATG	6 cut(s)	214, 403, 570, 597, 748, 1732
BtsIMutI	CAGTG	1 cut(s)	830
Cac8I	GCNNGC	3 cut(s)	556, 670, 1255
CaiI	CAGNNNCTG	1 cut(s)	1345
CciI	TCATGA	1 cut(s)	379
CfoI	GCGC	1 cut(s)	1642
Cfr10I	RCCGGY	1 cut(s)	937
Cfr13I	GGNCC	5 cut(s)	352, 746, 863, 935, 1394
Csp6I	GTAC	3 cut(s)	1278, 1322, 1841
CspAI	ACCGGT	1 cut(s)	937
CviQI	GTAC	3 cut(s)	1278, 1322, 1841
DdeI	CTNAG	8 cut(s)	559, 770, 782, 960, 1065, 1619, 1694, 1771
DraI	TTTAAA	1 cut(s)	1017
DraIII	CACNNNGTG	1 cut(s)	1406
Eam1104I	CTCTTC	4 cut(s)	436, 493, 1178, 1599
EarI	CTCTTC	4 cut(s)	436, 493, 1178, 1599
Ecl136II	GAGCTC	2 cut(s)	343, 767
Eco130I	CCWWGG	1 cut(s)	1146
Eco147I	AGGCCT	1 cut(s)	1094
Eco24I	GRGCYC	2 cut(s)	345, 769
Eco31I	GGTCTC	1 cut(s)	901
Eco32I	GATATC	2 cut(s)	977, 1538
Eco47I	GGWCC	4 cut(s)	746, 863, 935, 1394
Eco53kI	GAGCTC	2 cut(s)	343, 767
Eco57I	CTGAAG	1 cut(s)	1580
EcoICRI	GAGCTC	2 cut(s)	343, 767
EcoRII	CCWGG	1 cut(s)	1573
EcoRV	GATATC	2 cut(s)	977, 1538
EcoT14I	CCWWGG	1 cut(s)	1146
EcoT38I	GRGCYC	2 cut(s)	345, 769
ErhI	CCWWGG	1 cut(s)	1146
FalI	AAGNNNNNCTT	2 cut(s)	1464, 1496
FaqI	GGGAC	2 cut(s)	1574, 1637
FauNDI	CATATG	1 cut(s)	1309
FbaI	TGATCA	2 cut(s)	1312, 1794
FblI	GTMKAC	1 cut(s)	1438
Fnu4HI	GCNGC	7 cut(s)	791, 1143, 1183, 1242, 1503, 1506, 1683
FokI	GGATG	6 cut(s)	201, 410, 577, 604, 755, 1739
FriOI	GRGCYC	2 cut(s)	345, 769
Fsp4HI	GCNGC	7 cut(s)	791, 1143, 1183, 1242, 1503, 1506, 1683
FspBI	CTAG	2 cut(s)	822, 1917
GlaI	GCGC	1 cut(s)	1641
GluI	GCNGC	7 cut(s)	791, 1143, 1183, 1242, 1503, 1506, 1683
GsuI	CTGGAG	1 cut(s)	327
HaeIII	GGCC	4 cut(s)	353, 477, 1094, 1863
HapII	CCGG	3 cut(s)	483, 528, 938
HhaI	GCGC	1 cut(s)	1642
Hin6I	GCGC	1 cut(s)	1640
HinP1I	GCGC	1 cut(s)	1640
HindIII	AAGCTT	1 cut(s)	645
HinfI	GANTC	8 cut(s)	79, 325, 427, 515, 697, 1063, 1168, 1734
HpaII	CCGG	3 cut(s)	483, 528, 938
HphI	GGTGA	3 cut(s)	176, 337, 1894
Hpy166II	GTNNAC	2 cut(s)	1040, 1439
Hpy188I	TCNGA	6 cut(s)	157, 265, 280, 771, 1468, 1599
Hpy188III	TCNNGA	5 cut(s)	380, 905, 955, 1028, 1868
Hpy8I	GTNNAC	2 cut(s)	1040, 1439
HpyCH4III	ACNGT	7 cut(s)	349, 536, 834, 1044, 1520, 1720, 1801
HpyCH4IV	ACGT	1 cut(s)	1424
HpyF10VI	GCNNNNNNNGC	9 cut(s)	483, 635, 644, 653, 992, 1100, 1139, 1250, 1502
HpyF3I	CTNAG	8 cut(s)	559, 770, 782, 960, 1065, 1619, 1694, 1771
HpySE526I	ACGT	1 cut(s)	1424
HspAI	GCGC	1 cut(s)	1640
Ksp22I	TGATCA	2 cut(s)	1312, 1794
LmnI	GCTCC	4 cut(s)	764, 1385, 1409, 1465
Lsp1109I	GCAGC	6 cut(s)	777, 1154, 1228, 1489, 1517, 1669
LweI	GCATC	2 cut(s)	1694, 1717
MaeI	CTAG	2 cut(s)	822, 1917
MaeII	ACGT	1 cut(s)	1424
MaeIII	GTNAC	4 cut(s)	955, 1231, 1420, 1577
MflI	RGATCY	2 cut(s)	275, 387
MhlI	GDGCHC	5 cut(s)	345, 534, 769, 781, 923
MluCI	AATT	4 cut(s)	26, 799, 1019, 1844
MlyI	GAGTC	2 cut(s)	509, 1057
MmeI	TCCRAC	3 cut(s)	708, 742, 1421
MroXI	GAANNNNTTC	1 cut(s)	1172
MseI	TTAA	8 cut(s)	21, 99, 291, 914, 1016, 1266, 1485, 1709
MslI	CAYNNNNRTG	1 cut(s)	692
MspA1I	CMGCKG	3 cut(s)	638, 1502, 1661
MspCI	CTTAAG	1 cut(s)	1265
MspI	CCGG	3 cut(s)	483, 528, 938
MspR9I	CCNGG	2 cut(s)	529, 1575
MvaI	CCWGG	1 cut(s)	1575
MvnI	CGCG	1 cut(s)	1704
MwoI	GCNNNNNNNGC	9 cut(s)	483, 635, 644, 653, 992, 1100, 1139, 1250, 1502
NciI	CCSGG	1 cut(s)	529
NcoI	CCATGG	1 cut(s)	1146
NdeI	CATATG	1 cut(s)	1309
NlaIV	GGNNCC	4 cut(s)	526, 1159, 1461, 1813
NmuCI	GTSAC	2 cut(s)	955, 1420
NspI	RCATGY	3 cut(s)	1229, 1437, 1838
NspV	TTCGAA	3 cut(s)	299, 323, 1176
PagI	TCATGA	1 cut(s)	379
PceI	AGGCCT	1 cut(s)	1094
PdmI	GAANNNNTTC	1 cut(s)	1172
PfeI	GAWTC	6 cut(s)	79, 325, 427, 697, 1168, 1734
PflFI	GACNNNGTC	1 cut(s)	1066
PflMI	CCANNNNNTGG	1 cut(s)	872
PinAI	ACCGGT	1 cut(s)	937
PkrI	GCNGC	7 cut(s)	792, 1144, 1184, 1243, 1504, 1507, 1684
PleI	GAGTC	2 cut(s)	509, 1057
PpsI	GAGTC	2 cut(s)	509, 1057
Psp124BI	GAGCTC	2 cut(s)	345, 769
Psp6I	CCWGG	1 cut(s)	1573
PspGI	CCWGG	1 cut(s)	1573
PspN4I	GGNNCC	4 cut(s)	526, 1159, 1461, 1813
PspPI	GGNCC	5 cut(s)	352, 746, 863, 935, 1394
PstI	CTGCAG	2 cut(s)	556, 1507
PstNI	CAGNNNCTG	1 cut(s)	1345
PsuI	RGATCY	2 cut(s)	275, 387
PsyI	GACNNNGTC	1 cut(s)	1066
PvuII	CAGCTG	1 cut(s)	638
RsaI	GTAC	3 cut(s)	1279, 1323, 1842
RsaNI	GTAC	3 cut(s)	1278, 1322, 1841
RseI	CAYNNNNRTG	1 cut(s)	692
SacI	GAGCTC	2 cut(s)	345, 769
SaqAI	TTAA	8 cut(s)	21, 99, 291, 914, 1016, 1266, 1485, 1709
SatI	GCNGC	7 cut(s)	791, 1143, 1183, 1242, 1503, 1506, 1683
Sau96I	GGNCC	5 cut(s)	352, 746, 863, 935, 1394
SchI	GAGTC	2 cut(s)	509, 1057
ScrFI	CCNGG	2 cut(s)	529, 1575
SduI	GDGCHC	5 cut(s)	345, 534, 769, 781, 923
SfaNI	GCATC	2 cut(s)	1694, 1717
SfcI	CTRYAG	4 cut(s)	552, 570, 1337, 1503
SfuI	TTCGAA	3 cut(s)	299, 323, 1176
SinI	GGWCC	4 cut(s)	746, 863, 935, 1394
SmiMI	CAYNNNNRTG	1 cut(s)	692
SmlI	CTYRAG	2 cut(s)	1265, 1880
SmoI	CTYRAG	2 cut(s)	1265, 1880
SpeI	ACTAGT	1 cut(s)	821
Sse9I	AATT	4 cut(s)	26, 799, 1019, 1844
SseBI	AGGCCT	1 cut(s)	1094
SsiI	CCGC	5 cut(s)	1183, 1500, 1661, 1704, 1724
SspI	AATATT	3 cut(s)	128, 170, 1054
SspMI	CTAG	2 cut(s)	822, 1917
SstI	GAGCTC	2 cut(s)	345, 769
StuI	AGGCCT	1 cut(s)	1094
StyD4I	CCNGG	2 cut(s)	527, 1573
StyI	CCWWGG	1 cut(s)	1146
TaaI	ACNGT	7 cut(s)	349, 536, 834, 1044, 1520, 1720, 1801
TaiI	ACGT	1 cut(s)	1427
TaqI	TCGA	7 cut(s)	299, 323, 539, 1176, 1203, 1534, 1891
TasI	AATT	4 cut(s)	26, 799, 1019, 1844
TatI	WGTACW	2 cut(s)	1277, 1321
TauI	GCSGC	1 cut(s)	1185
TfiI	GAWTC	6 cut(s)	79, 325, 427, 697, 1168, 1734
Tru1I	TTAA	8 cut(s)	21, 99, 291, 914, 1016, 1266, 1485, 1709
Tru9I	TTAA	8 cut(s)	21, 99, 291, 914, 1016, 1266, 1485, 1709
TscAI	CASTG	1 cut(s)	837
TseFI	GTSAC	2 cut(s)	955, 1420
TseI	GCWGC	6 cut(s)	790, 1142, 1241, 1502, 1505, 1682
Tsp45I	GTSAC	2 cut(s)	955, 1420
TspDTI	ATGAA	9 cut(s)	242, 347, 467, 608, 666, 674, 1127, 1285, 1485
TspGWI	ACGGA	1 cut(s)	37
TspRI	CASTG	1 cut(s)	837
Tth111I	GACNNNGTC	1 cut(s)	1066
Van91I	CCANNNNNTGG	1 cut(s)	872
Vha464I	CTTAAG	1 cut(s)	1265
VpaK11BI	GGWCC	4 cut(s)	746, 863, 935, 1394
XapI	RAATTY	2 cut(s)	26, 1019
XceI	RCATGY	3 cut(s)	1229, 1437, 1838
XmiI	GTMKAC	1 cut(s)	1438
XmnI	GAANNNNTTC	1 cut(s)	1172
XspI	CTAG	2 cut(s)	822, 1917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.