Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0007296

Physical Location & Seq

Genomic Coordinates Forward (+)

10442388 .. 10446713

Gene Structure 4326 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g12140.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGGGTGTTGCTTCTGCTGGGTACCCTTTTGGAGTCACTTCCCATTGCCATGGAAAGTTGGGGGCTTTTCCTCAGAAAGTGGAGTTCTTTGGCTCTAATTTCCCACTGCATGTGGAATTTCCAGGACATAAATTGTACCCAAGTTCCGTTTTTCCCCCTGCATCCAAGGAAATTGCAAGTCGAATATGTTCTCTACCTGACGATGACGAATGGTTCTTGGAAGAAATGTTAACCCCCATTCTTGATTCAGTTGAAAATCCTATCCACCTGAAGAACTTGTCTGTTGAATTATCATCTATAATGTTGAGAACGCGAAAGTCTTTCAGAGCCAGTTTGGCAGTGGTTGAGTTGACGGTTGCAATACACCATGTTTTTCATGCTCCCGTGGACAAGATAATTTGGGATGTTGTAGAACAAATGCTCATAAAATACTTACAGGAAGGCGGGGCCTCGTACATACAGCTCGACGAAATAATGGTTTTTCTGGTCCTTCATCTCGACCTGAGAGTGAATATCGATCCATTCGGGCCAGGGCATGGGTGCAGTAGCGTTTCTGCTGGACTGGGCATGGCAGTAGCACGGGATATTAAAGGAAAACGGGAATGTATTGTTTCAGTCATCAGCAATGGGACTACGATGGCTGGACAGGTCTATGAGGCGATGGGTAATGCAGGTTATTTGGACTCAAATATGGTAGTTATTTTAAATGACAGCCGGCACTCTTTACACCCAAAGACTGAGGAGTGTCCGAAGACAGCTATTAGTGCTCTGTCTAGTACCCTAAGCAAGCTCCAGTCAAGTAAATCCTTTCGAAGGTTTAGAGAAGTTGCTAAGGGTGTTACTAAAAGAATTGGTGGAGGCATGCATGAATTGGCAGCTAAAGTTGATGAGTATGCACGTGGTATGGTCGGTCCACTAGGATCAACTCTTTTTGAAGAGCTCGGATTGTATTATATTGGCCCTGTTGATGGACACAATGTTGAAGACCTGATTTGCGTTCTACAAGAAGTGGCATCTCTAAATTCAATGGGTCCTGTTTTGGTTCATGTGATAACGGAAGAAAATCGGGAAGTTGAAAACAACCCAAAGAGTGGGGTAGAAGGTTTGAATAACTCTGATGATTTACCGTCCAAAATCCACCGTAGAACTTATAGCGACTGCTTTGTGGAGGCTTTGGTGATGGAGGCAGAGAAGGACAAAGATATCGTAACTGTTCATGCAGGAATGCATATGGAAACAGCATTTCAGCTATTTCGTGAAAGATTTCCTGACAAGTTTTTTGATGTGGGAATGGCTGAACAACACGCAGTAACATTTTCGGCTGGTTTGGCATGTGGAGGACTTAAGCCATTTTGCATAATCCCGTCTACATTCCTACAAAGAGCTTATGATCAGGTAGTTCATGACGTAGATCGGCAAAGAATTCCAGTGCGTTTTGTCATTACAAGTGCAGGGTTGGTAGGATCTGATGGTCCCATGCATTGTGGAGCATTCGATATAGCATTTATGTCATGCTTACCAAATATGATCGTCATGGCACCATCCGATGAAGATGAGCTTGCCAACATGGTGGCCACTGCAGCCTACATTGATGATCGTCCAGTTTGCTTCCGATATCCAAGGGGCGCCCTTGTTGTGATGGACCATTCCGTATGCAGTGGGACCCCCATTGAGATTGGAAAAGGGAAAATTCTTGCGGAGGGTAAAGATGTGGCATTGCTTGGATATGGATCAATGGTTCAGAACTGCCTCAAGGCTCGGTCTCTTCTTTCAACACTGGGCATTGATGTAACAGTTGCTGATGCAAGGTTCTGCAAGCCGTTAGATGTCAAGCTTCTTAGGCAGCTTTGTCGAAACCATTCATATCTGATCACGGTTGAGGAAGGTTCTATTGGAGGATTTGGATCCCATGTTGCACAGTTCTTTTCTCTCGACGGACAGCTTGATGGAAACATTAAGTGGCGACCAATTCTTTTACCGGACAACTACATTGAGCATGCATCGCCAAATGAGCAGCTAGCTATTGCTGGATTAACTGGACACCACATAGCTGCAACGGCGTTGACTCTGCTTGGCCGGAATCGTGAAGCCCTTCATTTGATGTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00730 ko00900 ko01100 ko01110 ko01130 map00730 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

DXP_synthase_N Transket_pyr Transketolase_C

Protein Analysis

703

Amino Acids

76.72

Weight (kDa)

5.77

Isoelectric Point (pI)

39.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11380 AT5G11380 AT5G11380 AT5G11380
fragaria_vesca	FvH4_2g29720 FvH4_2g29720 FvH4_2g29720 FvH4_2g29720 FvH4_2g29720
malus_domestica	MD08G1142600.v1.1 MD15G1119100.v1.1
prunus_persica	Prupe.1G472400_v2.0.a1 Prupe.1G472400_v2.0.a1
pyrus_communis	pycom08g12140 pycom15g10730
rosa_chinensis	RchiOBHm_Chr6g0298741
rosa_laevigata	RLG00000011490
rosa_multiflora	Rmu_sc0013512.1_g000004
rosa_roxburghii	Rroxscaffold_7G00169380
rosa_rugosa	Rorug06G0282800
rosa_samantha	Rh6AG394000 Rh6BG401800 Rh6CG407700 Rh6DG394300
rosa_wichuraiana	Rw6G034460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	662
Acc65I	GGTACC	1 cut(s)	21
AccB1I	GGYRCC	3 cut(s)	21, 1537, 1625
AccB7I	CCANNNNNTGG	2 cut(s)	536, 1091
AccI	GTMKAC	1 cut(s)	1367
AccII	CGCG	1 cut(s)	313
AciI	CCGC	2 cut(s)	444, 1697
AclWI	GGATC	6 cut(s)	512, 928, 1471, 1738, 1899, 1912
AcoI	YGGCCR	2 cut(s)	1572, 2074
AcsI	RAATTY	4 cut(s)	116, 1021, 1422, 1689
AcuI	CTGAAG	1 cut(s)	290
AcvI	CACGTG	1 cut(s)	899
AcyI	GRCGYC	1 cut(s)	1626
AfaI	GTAC	4 cut(s)	23, 137, 455, 778
AfiI	CCNNNNNNNGG	4 cut(s)	536, 813, 968, 1091
AflII	CTTAAG	1 cut(s)	1343
AgsI	TTSAA	8 cut(s)	254, 287, 935, 983, 1026, 1076, 1108, 1773
AjnI	CCWGG	2 cut(s)	121, 529
AjuI	GAANNNNNNNTTGG	2 cut(s)	1875, 1907
AloI	GAACNNNNNNTCC	2 cut(s)	1722, 1754
Alw21I	GWGCWC	2 cut(s)	769, 942
Alw26I	GTCTC	1 cut(s)	1767
AlwI	GGATC	6 cut(s)	512, 928, 1471, 1738, 1899, 1912
AlwNI	CAGNNNCTG	1 cut(s)	1799
AoxI	GGCC	5 cut(s)	447, 527, 958, 1572, 2074
ApeKI	GCWGC	5 cut(s)	875, 1580, 1843, 2014, 2051
ApoI	RAATTY	4 cut(s)	116, 1021, 1422, 1689
ArsI	GACNNNNNNTTYG	2 cut(s)	1262, 1294
Asp700I	GAANNNNTTC	4 cut(s)	187, 1263, 1858, 2091
Asp718I	GGTACC	1 cut(s)	21
AspLEI	GCGC	1 cut(s)	1628
AspS9I	GGNCC	9 cut(s)	447, 487, 527, 911, 959, 1031, 1472, 1642, 1662
AsuHPI	GGTGA	1 cut(s)	1189
AsuII	TTCGAA	1 cut(s)	811
AsuNHI	GCTAGC	1 cut(s)	2017
AvaII	GGWCC	6 cut(s)	487, 911, 1031, 1472, 1642, 1662
BalI	TGGCCA	1 cut(s)	1574
BamHI	GGATCC	1 cut(s)	1904
BanI	GGYRCC	3 cut(s)	21, 1537, 1625
BanII	GRGCYC	1 cut(s)	942
BbrPI	CACGTG	1 cut(s)	899
BbsI	GAAGAC	2 cut(s)	758, 990
Bbv12I	GWGCWC	2 cut(s)	769, 942
BbvI	GCAGC	5 cut(s)	887, 1592, 1855, 2026, 2038
BccI	CCATC	8 cut(s)	631, 655, 962, 1174, 1463, 1549, 1633, 1940
BceAI	ACGGC	2 cut(s)	1804, 2073
BcgI	CGANNNNNNTGC	2 cut(s)	1832, 1866
BciT130I	CCWGG	2 cut(s)	123, 531
BclI	TGATCA	2 cut(s)	1390, 1869
BcoDI	GTCTC	1 cut(s)	1767
BfaI	CTAG	4 cut(s)	774, 917, 2018, 2107
BfmI	CTRYAG	1 cut(s)	1578
BfoI	RGCGCY	1 cut(s)	1629
BfrI	CTTAAG	1 cut(s)	1343
BfuAI	ACCTGC	1 cut(s)	662
BglI	GCCNNNNNGGC	1 cut(s)	335
BisI	GCNGC	5 cut(s)	876, 1581, 1844, 2015, 2052
BlsI	GCNGC	5 cut(s)	877, 1582, 1845, 2016, 2053
Bme1390I	CCNGG	2 cut(s)	123, 531
Bme18I	GGWCC	6 cut(s)	487, 911, 1031, 1472, 1642, 1662
BmgT120I	GGNCC	9 cut(s)	447, 487, 527, 911, 959, 1031, 1472, 1642, 1662
BmiI	GGNNCC	9 cut(s)	23, 448, 1032, 1474, 1539, 1627, 1663, 1664, 1906
BmrFI	CCNGG	2 cut(s)	123, 531
BmrI	ACTGGG	2 cut(s)	572, 1787
BmsI	GCATC	4 cut(s)	170, 1022, 1792, 2009
BmtI	GCTAGC	1 cut(s)	2021
BmuI	ACTGGG	2 cut(s)	572, 1787
BpiI	GAAGAC	2 cut(s)	758, 990
BpmI	CTGGAG	1 cut(s)	776
Bpu10I	CCTNAGC	2 cut(s)	782, 831
Bpu14I	TTCGAA	1 cut(s)	811
BpuEI	CTTGAG	1 cut(s)	1736
Bsa29I	ATCGAT	1 cut(s)	516
BsaAI	YACGTR	1 cut(s)	899
BsaBI	GATNNNNATC	2 cut(s)	1729, 1903
BsaHI	GRCGYC	1 cut(s)	1626
BsaI	GGTCTC	1 cut(s)	1767
BsaJI	CCNNGG	5 cut(s)	49, 165, 384, 530, 1619
BsaWI	WCCGGW	1 cut(s)	1978
Bsc4I	CCNNNNNNNGG	4 cut(s)	536, 813, 968, 1091
Bse118I	RCCGGY	1 cut(s)	714
Bse1I	ACTGG	7 cut(s)	330, 567, 793, 1427, 1601, 1782, 2041
Bse3DI	GCAATG	3 cut(s)	43, 631, 1715
Bse8I	GATNNNNATC	2 cut(s)	1729, 1903
BseBI	CCWGG	2 cut(s)	123, 531
BseCI	ATCGAT	1 cut(s)	516
BseDI	CCNNGG	5 cut(s)	49, 165, 384, 530, 1619
BseGI	GGATG	3 cut(s)	161, 409, 1541
BseJI	GATNNNNATC	2 cut(s)	1729, 1903
BseLI	CCNNNNNNNGG	4 cut(s)	536, 813, 968, 1091
BseMI	GCAATG	3 cut(s)	43, 631, 1715
BseMII	CTCAG	3 cut(s)	86, 494, 729
BseNI	ACTGG	7 cut(s)	330, 567, 793, 1427, 1601, 1782, 2041
BseRI	GAGGAG	1 cut(s)	755
BseXI	GCAGC	5 cut(s)	887, 1592, 1855, 2026, 2038
BseYI	CCCAGC	1 cut(s)	17
BsgI	GTGCAG	2 cut(s)	562, 1470
Bsh1236I	CGCG	1 cut(s)	313
BshFI	GGCC	5 cut(s)	449, 529, 960, 1574, 2076
BshNI	GGYRCC	3 cut(s)	21, 1537, 1625
BshVI	ATCGAT	1 cut(s)	516
BsiHKAI	GWGCWC	2 cut(s)	769, 942
BsiSI	CCGG	3 cut(s)	715, 1979, 2077
BslFI	GGGAC	3 cut(s)	643, 1458, 1675
BslI	CCNNNNNNNGG	4 cut(s)	536, 813, 968, 1091
BsmAI	GTCTC	1 cut(s)	1767
BsmFI	GGGAC	3 cut(s)	643, 1458, 1675
BsmI	GAATGC	2 cut(s)	1230, 1490
BsnI	GGCC	5 cut(s)	449, 529, 960, 1574, 2076
Bso31I	GGTCTC	1 cut(s)	1767
Bsp119I	TTCGAA	1 cut(s)	811
Bsp1286I	GDGCHC	2 cut(s)	769, 942
Bsp19I	CCATGG	1 cut(s)	49
BspACI	CCGC	2 cut(s)	444, 1697
BspANI	GGCC	5 cut(s)	449, 529, 960, 1574, 2076
BspCNI	CTCAG	3 cut(s)	85, 495, 730
BspDI	ATCGAT	1 cut(s)	516
BspFNI	CGCG	1 cut(s)	313
BspHI	TCATGA	1 cut(s)	1402
BspLI	GGNNCC	9 cut(s)	23, 448, 1032, 1474, 1539, 1627, 1663, 1664, 1906
BspMAI	CTGCAG	1 cut(s)	1582
BspMI	ACCTGC	1 cut(s)	662
BspOI	GCTAGC	1 cut(s)	2021
BspPI	GGATC	6 cut(s)	512, 928, 1471, 1738, 1899, 1912
BspQI	GCTCTTC	1 cut(s)	930
BspT104I	TTCGAA	1 cut(s)	811
BspT107I	GGYRCC	3 cut(s)	21, 1537, 1625
BspTI	CTTAAG	1 cut(s)	1343
BspTNI	GGTCTC	1 cut(s)	1767
BsrDI	GCAATG	3 cut(s)	43, 631, 1715
BsrFI	RCCGGY	1 cut(s)	714
BsrI	ACTGG	7 cut(s)	330, 567, 793, 1427, 1601, 1782, 2041
BssAI	RCCGGY	1 cut(s)	714
BssECI	CCNNGG	5 cut(s)	49, 165, 384, 530, 1619
BssNI	GRCGYC	1 cut(s)	1626
BssT1I	CCWWGG	3 cut(s)	49, 165, 1619
Bst2UI	CCWGG	2 cut(s)	123, 531
Bst4CI	ACNGT	7 cut(s)	355, 1128, 1142, 1213, 1795, 1876, 1920
Bst6I	CTCTTC	2 cut(s)	930, 1770
BstACI	GRCGYC	1 cut(s)	1626
BstAFI	CTTAAG	1 cut(s)	1343
BstBAI	YACGTR	1 cut(s)	899
BstBI	TTCGAA	1 cut(s)	811
BstC8I	GCNNGC	7 cut(s)	716, 788, 863, 1560, 1817, 1998, 2019
BstDEI	CTNAG	6 cut(s)	72, 503, 738, 782, 831, 1838
BstDSI	CCRYGG	2 cut(s)	49, 384
BstENI	CCTNNNNNAGG	1 cut(s)	811
BstF5I	GGATG	3 cut(s)	161, 409, 1541
BstFNI	CGCG	1 cut(s)	313
BstH2I	RGCGCY	1 cut(s)	1629
BstHHI	GCGC	1 cut(s)	1628
BstMAI	GTCTC	1 cut(s)	1767
BstMWI	GCNNNNNNNGC	8 cut(s)	335, 764, 1328, 1580, 1840, 2002, 2011, 2057
BstNI	CCWGG	2 cut(s)	123, 531
BstNSI	RCATGY	4 cut(s)	113, 865, 1335, 2000
BstSCI	CCNGG	2 cut(s)	121, 529
BstSFI	CTRYAG	1 cut(s)	1578
BstUI	CGCG	1 cut(s)	313
BstV1I	GCAGC	5 cut(s)	887, 1592, 1855, 2026, 2038
BstV2I	GAAGAC	2 cut(s)	758, 990
BstX2I	RGATCY	2 cut(s)	1463, 1904
BstXI	CCANNNNNNTGG	2 cut(s)	50, 1570
BstYI	RGATCY	2 cut(s)	1463, 1904
Bsu15I	ATCGAT	1 cut(s)	516
BsuRI	GGCC	5 cut(s)	449, 529, 960, 1574, 2076
BsuTUI	ATCGAT	1 cut(s)	516
BtgI	CCRYGG	2 cut(s)	49, 384
BtgZI	GCGATG	2 cut(s)	674, 1986
BtsCI	GGATG	3 cut(s)	161, 409, 1541
BtsI	GCAGTG	4 cut(s)	104, 345, 1575, 1663
BtsIMutI	CAGTG	6 cut(s)	104, 345, 1434, 1575, 1663, 1775
BveI	ACCTGC	1 cut(s)	662
Cac8I	GCNNGC	7 cut(s)	716, 788, 863, 1560, 1817, 1998, 2019
CaiI	CAGNNNCTG	1 cut(s)	1799
CciI	TCATGA	1 cut(s)	1402
CfoI	GCGC	1 cut(s)	1628
Cfr10I	RCCGGY	1 cut(s)	714
Cfr13I	GGNCC	9 cut(s)	447, 487, 527, 911, 959, 1031, 1472, 1642, 1662
ClaI	ATCGAT	1 cut(s)	516
Csp6I	GTAC	4 cut(s)	22, 136, 454, 777
CviQI	GTAC	4 cut(s)	22, 136, 454, 777
DdeI	CTNAG	6 cut(s)	72, 503, 738, 782, 831, 1838
DinI	GGCGCC	1 cut(s)	1627
DraI	TTTAAA	1 cut(s)	705
EaeI	YGGCCR	2 cut(s)	1572, 2074
Eam1104I	CTCTTC	2 cut(s)	930, 1770
EarI	CTCTTC	2 cut(s)	930, 1770
Ecl136II	GAGCTC	1 cut(s)	940
Eco130I	CCWWGG	3 cut(s)	49, 165, 1619
Eco24I	GRGCYC	1 cut(s)	942
Eco31I	GGTCTC	1 cut(s)	1767
Eco32I	GATATC	2 cut(s)	1204, 1616
Eco47I	GGWCC	6 cut(s)	487, 911, 1031, 1472, 1642, 1662
Eco53kI	GAGCTC	1 cut(s)	940
Eco57I	CTGAAG	1 cut(s)	290
Eco72I	CACGTG	1 cut(s)	899
EcoICRI	GAGCTC	1 cut(s)	940
EcoNI	CCTNNNNNAGG	1 cut(s)	811
EcoO109I	RGGNCCY	3 cut(s)	447, 1031, 1662
EcoRI	GAATTC	1 cut(s)	1422
EcoRII	CCWGG	2 cut(s)	121, 529
EcoRV	GATATC	2 cut(s)	1204, 1616
EcoT14I	CCWWGG	3 cut(s)	49, 165, 1619
EcoT22I	ATGCAT	4 cut(s)	867, 1230, 1482, 2002
EcoT38I	GRGCYC	1 cut(s)	942
EgeI	GGCGCC	1 cut(s)	1627
EheI	GGCGCC	1 cut(s)	1627
ErhI	CCWWGG	3 cut(s)	49, 165, 1619
FalI	AAGNNNNNCTT	2 cut(s)	1542, 1574
FaqI	GGGAC	3 cut(s)	643, 1458, 1675
FauI	CCCGC	1 cut(s)	437
FauNDI	CATATG	1 cut(s)	1230
FbaI	TGATCA	2 cut(s)	1390, 1869
FblI	GTMKAC	1 cut(s)	1367
Fnu4HI	GCNGC	5 cut(s)	876, 1581, 1844, 2015, 2052
FokI	GGATG	3 cut(s)	148, 416, 1528
FriOI	GRGCYC	1 cut(s)	942
Fsp4HI	GCNGC	5 cut(s)	876, 1581, 1844, 2015, 2052
FspBI	CTAG	4 cut(s)	774, 917, 2018, 2107
GlaI	GCGC	1 cut(s)	1627
GluI	GCNGC	5 cut(s)	876, 1581, 1844, 2015, 2052
GsaI	CCCAGC	1 cut(s)	21
GsuI	CTGGAG	1 cut(s)	776
HaeII	RGCGCY	1 cut(s)	1629
HaeIII	GGCC	5 cut(s)	449, 529, 960, 1574, 2076
HapII	CCGG	3 cut(s)	715, 1979, 2077
HhaI	GCGC	1 cut(s)	1628
Hin1I	GRCGYC	1 cut(s)	1626
Hin6I	GCGC	1 cut(s)	1626
HinP1I	GCGC	1 cut(s)	1626
HincII	GTYRAC	3 cut(s)	231, 351, 2064
HindII	GTYRAC	3 cut(s)	231, 351, 2064
HindIII	AAGCTT	1 cut(s)	1832
HinfI	GANTC	5 cut(s)	33, 245, 683, 2065, 2080
HpaI	GTTAAC	1 cut(s)	231
HpaII	CCGG	3 cut(s)	715, 1979, 2077
HphI	GGTGA	1 cut(s)	1189
Hpy166II	GTNNAC	6 cut(s)	231, 351, 388, 914, 1368, 2064
Hpy188III	TCNNGA	8 cut(s)	242, 497, 1067, 1256, 1268, 1403, 1931, 2084
Hpy8I	GTNNAC	6 cut(s)	231, 351, 388, 914, 1368, 2064
Hpy99I	CGWCG	2 cut(s)	470, 1937
HpyAV	CCTTC	7 cut(s)	434, 500, 807, 1094, 1186, 1877, 2102
HpyCH4III	ACNGT	7 cut(s)	355, 1128, 1142, 1213, 1795, 1876, 1920
HpyCH4IV	ACGT	2 cut(s)	898, 1407
HpyF10VI	GCNNNNNNNGC	8 cut(s)	335, 764, 1328, 1580, 1840, 2002, 2011, 2057
HpyF3I	CTNAG	6 cut(s)	72, 503, 738, 782, 831, 1838
HpySE526I	ACGT	2 cut(s)	898, 1407
Hsp92I	GRCGYC	1 cut(s)	1626
HspAI	GCGC	1 cut(s)	1626
KasI	GGCGCC	1 cut(s)	1625
KflI	GGGWCCC	1 cut(s)	1662
KpnI	GGTACC	1 cut(s)	25
KroI	GCCGGC	1 cut(s)	714
KroNI	GCCGGC	1 cut(s)	716
Ksp22I	TGATCA	2 cut(s)	1390, 1869
KspAI	GTTAAC	1 cut(s)	231
LguI	GCTCTTC	1 cut(s)	930
LmnI	GCTCC	3 cut(s)	385, 795, 1487
Lsp1109I	GCAGC	5 cut(s)	887, 1592, 1855, 2026, 2038
LweI	GCATC	4 cut(s)	170, 1022, 1792, 2009
MaeI	CTAG	4 cut(s)	774, 917, 2018, 2107
MaeII	ACGT	2 cut(s)	898, 1407
MaeIII	GTNAC	5 cut(s)	34, 838, 1207, 1309, 1789
MboII	GAAGA	8 cut(s)	233, 283, 763, 947, 995, 1070, 1562, 1757
MflI	RGATCY	2 cut(s)	1463, 1904
MhlI	GDGCHC	2 cut(s)	769, 942
MlsI	TGGCCA	1 cut(s)	1574
MluNI	TGGCCA	1 cut(s)	1574
Mly113I	GGCGCC	1 cut(s)	1626
MlyI	GAGTC	3 cut(s)	42, 677, 2059
Mox20I	TGGCCA	1 cut(s)	1574
Mph1103I	ATGCAT	4 cut(s)	867, 1230, 1482, 2002
MroNI	GCCGGC	1 cut(s)	714
MroXI	GAANNNNTTC	4 cut(s)	187, 1263, 1858, 2091
MscI	TGGCCA	1 cut(s)	1574
MseI	TTAA	6 cut(s)	230, 588, 704, 1344, 1956, 2033
MslI	CAYNNNNRTG	1 cut(s)	48
Msp20I	TGGCCA	1 cut(s)	1574
MspCI	CTTAAG	1 cut(s)	1343
MspI	CCGG	3 cut(s)	715, 1979, 2077
MspR9I	CCNGG	2 cut(s)	123, 531
Mva1269I	GAATGC	2 cut(s)	1230, 1490
MvaI	CCWGG	2 cut(s)	123, 531
MvnI	CGCG	1 cut(s)	313
MwoI	GCNNNNNNNGC	8 cut(s)	335, 764, 1328, 1580, 1840, 2002, 2011, 2057
NaeI	GCCGGC	1 cut(s)	716
NarI	GGCGCC	1 cut(s)	1626
NcoI	CCATGG	1 cut(s)	49
NdeI	CATATG	1 cut(s)	1230
NgoMIV	GCCGGC	1 cut(s)	714
NheI	GCTAGC	1 cut(s)	2017
NlaIV	GGNNCC	9 cut(s)	23, 448, 1032, 1474, 1539, 1627, 1663, 1664, 1906
NmuCI	GTSAC	1 cut(s)	34
NsiI	ATGCAT	4 cut(s)	867, 1230, 1482, 2002
NspI	RCATGY	4 cut(s)	113, 865, 1335, 2000
NspV	TTCGAA	1 cut(s)	811
PaeI	GCATGC	2 cut(s)	865, 2000
PagI	TCATGA	1 cut(s)	1402
PciSI	GCTCTTC	1 cut(s)	930
PctI	GAATGC	2 cut(s)	1230, 1490
PdiI	GCCGGC	1 cut(s)	716
PdmI	GAANNNNTTC	4 cut(s)	187, 1263, 1858, 2091
PfeI	GAWTC	2 cut(s)	245, 2080
PflMI	CCANNNNNTGG	2 cut(s)	536, 1091
PfoI	TCCNGGA	1 cut(s)	121
PkrI	GCNGC	5 cut(s)	877, 1582, 1845, 2016, 2053
PleI	GAGTC	3 cut(s)	41, 677, 2059
PluTI	GGCGCC	1 cut(s)	1629
PmaCI	CACGTG	1 cut(s)	899
PmlI	CACGTG	1 cut(s)	899
PpsI	GAGTC	3 cut(s)	41, 677, 2059
Ppu21I	YACGTR	1 cut(s)	899
PpuMI	RGGWCCY	2 cut(s)	1031, 1662
Psp124BI	GAGCTC	1 cut(s)	942
Psp5II	RGGWCCY	2 cut(s)	1031, 1662
Psp6I	CCWGG	2 cut(s)	121, 529
PspCI	CACGTG	1 cut(s)	899
PspFI	CCCAGC	1 cut(s)	17
PspGI	CCWGG	2 cut(s)	121, 529
PspN4I	GGNNCC	9 cut(s)	23, 448, 1032, 1474, 1539, 1627, 1663, 1664, 1906
PspPI	GGNCC	9 cut(s)	447, 487, 527, 911, 959, 1031, 1472, 1642, 1662
PspPPI	RGGWCCY	2 cut(s)	1031, 1662
PstI	CTGCAG	1 cut(s)	1582
PstNI	CAGNNNCTG	1 cut(s)	1799
PsuI	RGATCY	2 cut(s)	1463, 1904
RsaI	GTAC	4 cut(s)	23, 137, 455, 778
RsaNI	GTAC	4 cut(s)	22, 136, 454, 777
RseI	CAYNNNNRTG	1 cut(s)	48
SacI	GAGCTC	1 cut(s)	942
SapI	GCTCTTC	1 cut(s)	930
SaqAI	TTAA	6 cut(s)	230, 588, 704, 1344, 1956, 2033
SatI	GCNGC	5 cut(s)	876, 1581, 1844, 2015, 2052
Sau96I	GGNCC	9 cut(s)	447, 487, 527, 911, 959, 1031, 1472, 1642, 1662
SchI	GAGTC	3 cut(s)	42, 677, 2059
ScrFI	CCNGG	2 cut(s)	123, 531
SduI	GDGCHC	2 cut(s)	769, 942
SfaNI	GCATC	4 cut(s)	170, 1022, 1792, 2009
SfcI	CTRYAG	1 cut(s)	1578
SfoI	GGCGCC	1 cut(s)	1627
SfuI	TTCGAA	1 cut(s)	811
SinI	GGWCC	6 cut(s)	487, 911, 1031, 1472, 1642, 1662
SmiMI	CAYNNNNRTG	1 cut(s)	48
SmlI	CTYRAG	2 cut(s)	1343, 1751
SmoI	CTYRAG	2 cut(s)	1343, 1751
SphI	GCATGC	2 cut(s)	865, 2000
SsiI	CCGC	2 cut(s)	444, 1697
SspDI	GGCGCC	1 cut(s)	1625
SspMI	CTAG	4 cut(s)	774, 917, 2018, 2107
SstI	GAGCTC	1 cut(s)	942
StyD4I	CCNGG	2 cut(s)	121, 529
StyI	CCWWGG	3 cut(s)	49, 165, 1619
TaaI	ACNGT	7 cut(s)	355, 1128, 1142, 1213, 1795, 1876, 1920
TaiI	ACGT	2 cut(s)	901, 1410
TaqI	TCGA	8 cut(s)	181, 465, 498, 516, 811, 1494, 1852, 1932
TaqII	GACCGA	2 cut(s)	899, 1749
TfiI	GAWTC	2 cut(s)	245, 2080
Tru1I	TTAA	6 cut(s)	230, 588, 704, 1344, 1956, 2033
Tru9I	TTAA	6 cut(s)	230, 588, 704, 1344, 1956, 2033
TscAI	CASTG	6 cut(s)	111, 345, 1434, 1582, 1663, 1782
TseFI	GTSAC	1 cut(s)	34
TseI	GCWGC	5 cut(s)	875, 1580, 1843, 2014, 2051
Tsp45I	GTSAC	1 cut(s)	34
TspDTI	ATGAA	9 cut(s)	365, 482, 882, 1034, 1205, 1391, 1563, 1851, 2084
TspGWI	ACGGA	4 cut(s)	136, 1070, 1639, 1950
TspRI	CASTG	6 cut(s)	111, 345, 1434, 1582, 1663, 1782
Van91I	CCANNNNNTGG	2 cut(s)	536, 1091
Vha464I	CTTAAG	1 cut(s)	1343
VpaK11BI	GGWCC	6 cut(s)	487, 911, 1031, 1472, 1642, 1662
XagI	CCTNNNNNAGG	1 cut(s)	811
XapI	RAATTY	4 cut(s)	116, 1021, 1422, 1689
XceI	RCATGY	4 cut(s)	113, 865, 1335, 2000
XcmI	CCANNNNNNNNNTGG	1 cut(s)	337
XmiI	GTMKAC	1 cut(s)	1367
XmnI	GAANNNNTTC	4 cut(s)	187, 1263, 1858, 2091
XspI	CTAG	4 cut(s)	774, 917, 2018, 2107
Zsp2I	ATGCAT	4 cut(s)	867, 1230, 1482, 2002

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.