1-deoxy-D-xylulose-5-phosphate synthase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11380 AT5G11380 AT5G11380 AT5G11380 |
| fragaria_vesca | FvH4_2g29720 FvH4_2g29720 FvH4_2g29720 FvH4_2g29720 FvH4_2g29720 |
| malus_domestica | MD08G1142600.v1.1 MD15G1119100.v1.1 |
| prunus_persica | Prupe.1G472400_v2.0.a1 Prupe.1G472400_v2.0.a1 |
| pyrus_communis | pycom08g12140 pycom15g10730 |
| rosa_chinensis | RchiOBHm_Chr6g0298741 |
| rosa_laevigata | RLG00000011490 |
| rosa_multiflora | Rmu_sc0013512.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00169380 |
| rosa_rugosa | Rorug06G0282800 |
| rosa_samantha | Rh6AG394000 Rh6BG401800 Rh6CG407700 Rh6DG394300 |
| rosa_wichuraiana | Rw6G034460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 701 |
| Acc65I | GGTACC | 1 cut(s) | 21 |
| AccB1I | GGYRCC | 3 cut(s) | 21, 1576, 1664 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 575, 1130 |
| AccI | GTMKAC | 1 cut(s) | 1406 |
| AccII | CGCG | 1 cut(s) | 349 |
| AciI | CCGC | 2 cut(s) | 484, 1736 |
| AclWI | GGATC | 6 cut(s) | 551, 967, 1510, 1777, 1938, 1951 |
| AcoI | YGGCCR | 3 cut(s) | 566, 1611, 2113 |
| AcsI | RAATTY | 4 cut(s) | 97, 116, 1461, 1728 |
| AcuI | CTGAAG | 1 cut(s) | 290 |
| AcvI | CACGTG | 1 cut(s) | 938 |
| AcyI | GRCGYC | 1 cut(s) | 1665 |
| AdeI | CACNNNGTG | 1 cut(s) | 79 |
| AfaI | GTAC | 4 cut(s) | 23, 137, 495, 817 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 575, 852, 1007, 1130 |
| AgsI | TTSAA | 8 cut(s) | 254, 287, 974, 1022, 1065, 1115, 1147, 1812 |
| AjnI | CCWGG | 2 cut(s) | 121, 568 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1914, 1946 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1761, 1793 |
| Alw21I | GWGCWC | 2 cut(s) | 808, 981 |
| Alw26I | GTCTC | 1 cut(s) | 1806 |
| AlwI | GGATC | 6 cut(s) | 551, 967, 1510, 1777, 1938, 1951 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1838 |
| AoxI | GGCC | 5 cut(s) | 487, 566, 997, 1611, 2113 |
| ApeKI | GCWGC | 6 cut(s) | 8, 914, 1619, 1882, 2053, 2090 |
| ApoI | RAATTY | 4 cut(s) | 97, 116, 1461, 1728 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1301, 1333 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 37, 187, 1302, 1897, 2130 |
| Asp718I | GGTACC | 1 cut(s) | 21 |
| AspLEI | GCGC | 1 cut(s) | 1667 |
| AspS9I | GGNCC | 9 cut(s) | 487, 527, 785, 950, 998, 1070, 1511, 1681, 1701 |
| AsuHPI | GGTGA | 1 cut(s) | 1228 |
| AsuII | TTCGAA | 1 cut(s) | 850 |
| AsuNHI | GCTAGC | 1 cut(s) | 2056 |
| AvaII | GGWCC | 7 cut(s) | 527, 785, 950, 1070, 1511, 1681, 1701 |
| BalI | TGGCCA | 2 cut(s) | 568, 1613 |
| BamHI | GGATCC | 1 cut(s) | 1943 |
| BanI | GGYRCC | 3 cut(s) | 21, 1576, 1664 |
| BanII | GRGCYC | 1 cut(s) | 981 |
| BbrPI | CACGTG | 1 cut(s) | 938 |
| BbsI | GAAGAC | 1 cut(s) | 1029 |
| Bbv12I | GWGCWC | 2 cut(s) | 808, 981 |
| BbvI | GCAGC | 5 cut(s) | 926, 1631, 1894, 2065, 2102 |
| BccI | CCATC | 8 cut(s) | 670, 694, 1001, 1213, 1502, 1588, 1672, 1979 |
| BceAI | ACGGC | 1 cut(s) | 2112 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1871, 1905 |
| BciT130I | CCWGG | 2 cut(s) | 123, 570 |
| BclI | TGATCA | 2 cut(s) | 1429, 1908 |
| BcoDI | GTCTC | 1 cut(s) | 1806 |
| BfaI | CTAG | 4 cut(s) | 813, 956, 2057, 2146 |
| BfmI | CTRYAG | 1 cut(s) | 1617 |
| BfoI | RGCGCY | 1 cut(s) | 1668 |
| BfuAI | ACCTGC | 1 cut(s) | 701 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 371 |
| BisI | GCNGC | 6 cut(s) | 9, 915, 1620, 1883, 2054, 2091 |
| BlsI | GCNGC | 6 cut(s) | 10, 916, 1621, 1884, 2055, 2092 |
| Bme1390I | CCNGG | 2 cut(s) | 123, 570 |
| Bme18I | GGWCC | 7 cut(s) | 527, 785, 950, 1070, 1511, 1681, 1701 |
| BmgT120I | GGNCC | 9 cut(s) | 487, 527, 785, 950, 998, 1070, 1511, 1681, 1701 |
| BmrFI | CCNGG | 2 cut(s) | 123, 570 |
| BmrI | ACTGGG | 2 cut(s) | 611, 1826 |
| BmsI | GCATC | 4 cut(s) | 170, 1061, 1831, 2048 |
| BmtI | GCTAGC | 1 cut(s) | 2060 |
| BmuI | ACTGGG | 2 cut(s) | 611, 1826 |
| BpiI | GAAGAC | 1 cut(s) | 1029 |
| BpmI | CTGGAG | 1 cut(s) | 815 |
| Bpu10I | CCTNAGC | 2 cut(s) | 821, 870 |
| Bpu14I | TTCGAA | 1 cut(s) | 850 |
| BpuEI | CTTGAG | 1 cut(s) | 1775 |
| BsaAI | YACGTR | 1 cut(s) | 938 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1768, 1942 |
| BsaHI | GRCGYC | 1 cut(s) | 1665 |
| BsaI | GGTCTC | 1 cut(s) | 1806 |
| BsaJI | CCNNGG | 5 cut(s) | 49, 165, 420, 569, 1658 |
| BsaWI | WCCGGW | 1 cut(s) | 2017 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 575, 852, 1007, 1130 |
| Bse118I | RCCGGY | 1 cut(s) | 753 |
| Bse1I | ACTGG | 7 cut(s) | 366, 606, 832, 1466, 1640, 1821, 2080 |
| Bse3DI | GCAATG | 3 cut(s) | 43, 670, 1754 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1768, 1942 |
| BseBI | CCWGG | 2 cut(s) | 123, 570 |
| BseDI | CCNNGG | 5 cut(s) | 49, 165, 420, 569, 1658 |
| BseGI | GGATG | 4 cut(s) | 161, 445, 1580, 2039 |
| BseJI | GATNNNNATC | 2 cut(s) | 1768, 1942 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 575, 852, 1007, 1130 |
| BseMI | GCAATG | 3 cut(s) | 43, 670, 1754 |
| BseMII | CTCAG | 2 cut(s) | 534, 768 |
| BseNI | ACTGG | 7 cut(s) | 366, 606, 832, 1466, 1640, 1821, 2080 |
| BseRI | GAGGAG | 1 cut(s) | 794 |
| BseXI | GCAGC | 5 cut(s) | 926, 1631, 1894, 2065, 2102 |
| BseYI | CCCAGC | 1 cut(s) | 17 |
| BsgI | GTGCAG | 2 cut(s) | 601, 1509 |
| Bsh1236I | CGCG | 1 cut(s) | 349 |
| BshFI | GGCC | 5 cut(s) | 489, 568, 999, 1613, 2115 |
| BshNI | GGYRCC | 3 cut(s) | 21, 1576, 1664 |
| BsiHKAI | GWGCWC | 2 cut(s) | 808, 981 |
| BsiSI | CCGG | 3 cut(s) | 754, 2018, 2116 |
| BslFI | GGGAC | 3 cut(s) | 682, 1497, 1714 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 575, 852, 1007, 1130 |
| BsmAI | GTCTC | 1 cut(s) | 1806 |
| BsmFI | GGGAC | 3 cut(s) | 682, 1497, 1714 |
| BsmI | GAATGC | 2 cut(s) | 1269, 1529 |
| BsnI | GGCC | 5 cut(s) | 489, 568, 999, 1613, 2115 |
| Bso31I | GGTCTC | 1 cut(s) | 1806 |
| Bsp119I | TTCGAA | 1 cut(s) | 850 |
| Bsp1286I | GDGCHC | 2 cut(s) | 808, 981 |
| Bsp19I | CCATGG | 1 cut(s) | 49 |
| BspACI | CCGC | 2 cut(s) | 484, 1736 |
| BspANI | GGCC | 5 cut(s) | 489, 568, 999, 1613, 2115 |
| BspCNI | CTCAG | 2 cut(s) | 535, 769 |
| BspFNI | CGCG | 1 cut(s) | 349 |
| BspHI | TCATGA | 1 cut(s) | 1441 |
| BspMAI | CTGCAG | 1 cut(s) | 1621 |
| BspMI | ACCTGC | 1 cut(s) | 701 |
| BspOI | GCTAGC | 1 cut(s) | 2060 |
| BspPI | GGATC | 6 cut(s) | 551, 967, 1510, 1777, 1938, 1951 |
| BspQI | GCTCTTC | 1 cut(s) | 969 |
| BspT104I | TTCGAA | 1 cut(s) | 850 |
| BspT107I | GGYRCC | 3 cut(s) | 21, 1576, 1664 |
| BspTNI | GGTCTC | 1 cut(s) | 1806 |
| BsrDI | GCAATG | 3 cut(s) | 43, 670, 1754 |
| BsrFI | RCCGGY | 1 cut(s) | 753 |
| BsrI | ACTGG | 7 cut(s) | 366, 606, 832, 1466, 1640, 1821, 2080 |
| BssAI | RCCGGY | 1 cut(s) | 753 |
| BssECI | CCNNGG | 5 cut(s) | 49, 165, 420, 569, 1658 |
| BssNI | GRCGYC | 1 cut(s) | 1665 |
| BssT1I | CCWWGG | 3 cut(s) | 49, 165, 1658 |
| Bst2UI | CCWGG | 2 cut(s) | 123, 570 |
| Bst4CI | ACNGT | 8 cut(s) | 300, 391, 1167, 1181, 1252, 1834, 1915, 1959 |
| Bst6I | CTCTTC | 2 cut(s) | 969, 1809 |
| BstACI | GRCGYC | 1 cut(s) | 1665 |
| BstBAI | YACGTR | 1 cut(s) | 938 |
| BstBI | TTCGAA | 1 cut(s) | 850 |
| BstC8I | GCNNGC | 7 cut(s) | 755, 827, 902, 1599, 1856, 2037, 2058 |
| BstDEI | CTNAG | 6 cut(s) | 543, 777, 821, 870, 1861, 1877 |
| BstDSI | CCRYGG | 2 cut(s) | 49, 420 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 850 |
| BstF5I | GGATG | 4 cut(s) | 161, 445, 1580, 2039 |
| BstFNI | CGCG | 1 cut(s) | 349 |
| BstH2I | RGCGCY | 1 cut(s) | 1668 |
| BstHHI | GCGC | 1 cut(s) | 1667 |
| BstMAI | GTCTC | 1 cut(s) | 1806 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 14, 371, 803, 1367, 1619, 1879, 2096 |
| BstNI | CCWGG | 2 cut(s) | 123, 570 |
| BstNSI | RCATGY | 4 cut(s) | 113, 904, 1374, 2039 |
| BstSCI | CCNGG | 2 cut(s) | 121, 568 |
| BstSFI | CTRYAG | 1 cut(s) | 1617 |
| BstUI | CGCG | 1 cut(s) | 349 |
| BstV1I | GCAGC | 5 cut(s) | 926, 1631, 1894, 2065, 2102 |
| BstV2I | GAAGAC | 1 cut(s) | 1029 |
| BstX2I | RGATCY | 2 cut(s) | 1502, 1943 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 50, 1609 |
| BstYI | RGATCY | 2 cut(s) | 1502, 1943 |
| BsuRI | GGCC | 5 cut(s) | 489, 568, 999, 1613, 2115 |
| BtgI | CCRYGG | 2 cut(s) | 49, 420 |
| BtgZI | GCGATG | 1 cut(s) | 713 |
| BtsCI | GGATG | 4 cut(s) | 161, 445, 1580, 2039 |
| BtsI | GCAGTG | 4 cut(s) | 104, 381, 1614, 1702 |
| BtsIMutI | CAGTG | 6 cut(s) | 104, 381, 1473, 1614, 1702, 1814 |
| BveI | ACCTGC | 1 cut(s) | 701 |
| Cac8I | GCNNGC | 7 cut(s) | 755, 827, 902, 1599, 1856, 2037, 2058 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1838 |
| CciI | TCATGA | 1 cut(s) | 1441 |
| CfoI | GCGC | 1 cut(s) | 1667 |
| Cfr10I | RCCGGY | 1 cut(s) | 753 |
| Cfr13I | GGNCC | 9 cut(s) | 487, 527, 785, 950, 998, 1070, 1511, 1681, 1701 |
| Csp6I | GTAC | 4 cut(s) | 22, 136, 494, 816 |
| CviQI | GTAC | 4 cut(s) | 22, 136, 494, 816 |
| DdeI | CTNAG | 6 cut(s) | 543, 777, 821, 870, 1861, 1877 |
| DinI | GGCGCC | 1 cut(s) | 1666 |
| DraI | TTTAAA | 1 cut(s) | 744 |
| DraIII | CACNNNGTG | 1 cut(s) | 79 |
| EaeI | YGGCCR | 3 cut(s) | 566, 1611, 2113 |
| Eam1104I | CTCTTC | 2 cut(s) | 969, 1809 |
| EarI | CTCTTC | 2 cut(s) | 969, 1809 |
| Ecl136II | GAGCTC | 1 cut(s) | 979 |
| Eco130I | CCWWGG | 3 cut(s) | 49, 165, 1658 |
| Eco24I | GRGCYC | 1 cut(s) | 981 |
| Eco31I | GGTCTC | 1 cut(s) | 1806 |
| Eco32I | GATATC | 2 cut(s) | 1243, 1655 |
| Eco47I | GGWCC | 7 cut(s) | 527, 785, 950, 1070, 1511, 1681, 1701 |
| Eco53kI | GAGCTC | 1 cut(s) | 979 |
| Eco57I | CTGAAG | 1 cut(s) | 290 |
| Eco72I | CACGTG | 1 cut(s) | 938 |
| EcoICRI | GAGCTC | 1 cut(s) | 979 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 850 |
| EcoO109I | RGGNCCY | 3 cut(s) | 487, 1070, 1701 |
| EcoRI | GAATTC | 1 cut(s) | 1461 |
| EcoRII | CCWGG | 2 cut(s) | 121, 568 |
| EcoRV | GATATC | 2 cut(s) | 1243, 1655 |
| EcoT14I | CCWWGG | 3 cut(s) | 49, 165, 1658 |
| EcoT22I | ATGCAT | 4 cut(s) | 906, 1269, 1521, 2041 |
| EcoT38I | GRGCYC | 1 cut(s) | 981 |
| EgeI | GGCGCC | 1 cut(s) | 1666 |
| EheI | GGCGCC | 1 cut(s) | 1666 |
| ErhI | CCWWGG | 3 cut(s) | 49, 165, 1658 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1581, 1613 |
| FaqI | GGGAC | 3 cut(s) | 682, 1497, 1714 |
| FauI | CCCGC | 1 cut(s) | 477 |
| FauNDI | CATATG | 2 cut(s) | 457, 1269 |
| FbaI | TGATCA | 2 cut(s) | 1429, 1908 |
| FblI | GTMKAC | 1 cut(s) | 1406 |
| Fnu4HI | GCNGC | 6 cut(s) | 9, 915, 1620, 1883, 2054, 2091 |
| FokI | GGATG | 4 cut(s) | 148, 452, 1567, 2026 |
| FriOI | GRGCYC | 1 cut(s) | 981 |
| Fsp4HI | GCNGC | 6 cut(s) | 9, 915, 1620, 1883, 2054, 2091 |
| FspBI | CTAG | 4 cut(s) | 813, 956, 2057, 2146 |
| GlaI | GCGC | 1 cut(s) | 1666 |
| GluI | GCNGC | 6 cut(s) | 9, 915, 1620, 1883, 2054, 2091 |
| GsaI | CCCAGC | 1 cut(s) | 21 |
| GsuI | CTGGAG | 1 cut(s) | 815 |
| HaeII | RGCGCY | 1 cut(s) | 1668 |
| HaeIII | GGCC | 5 cut(s) | 489, 568, 999, 1613, 2115 |
| HapII | CCGG | 3 cut(s) | 754, 2018, 2116 |
| HhaI | GCGC | 1 cut(s) | 1667 |
| Hin1I | GRCGYC | 1 cut(s) | 1665 |
| Hin6I | GCGC | 1 cut(s) | 1665 |
| HinP1I | GCGC | 1 cut(s) | 1665 |
| HincII | GTYRAC | 4 cut(s) | 231, 327, 387, 2103 |
| HindII | GTYRAC | 4 cut(s) | 231, 327, 387, 2103 |
| HindIII | AAGCTT | 1 cut(s) | 1871 |
| HinfI | GANTC | 4 cut(s) | 33, 245, 722, 2119 |
| HpaI | GTTAAC | 2 cut(s) | 231, 327 |
| HpaII | CCGG | 3 cut(s) | 754, 2018, 2116 |
| HphI | GGTGA | 1 cut(s) | 1228 |
| Hpy166II | GTNNAC | 7 cut(s) | 231, 327, 387, 424, 953, 1407, 2103 |
| Hpy188III | TCNNGA | 7 cut(s) | 242, 537, 1106, 1295, 1307, 1442, 2123 |
| Hpy8I | GTNNAC | 7 cut(s) | 231, 327, 387, 424, 953, 1407, 2103 |
| Hpy99I | CGWCG | 1 cut(s) | 510 |
| HpyAV | CCTTC | 7 cut(s) | 474, 540, 846, 1133, 1225, 1916, 2141 |
| HpyCH4III | ACNGT | 8 cut(s) | 300, 391, 1167, 1181, 1252, 1834, 1915, 1959 |
| HpyCH4IV | ACGT | 2 cut(s) | 937, 1446 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 14, 371, 803, 1367, 1619, 1879, 2096 |
| HpyF3I | CTNAG | 6 cut(s) | 543, 777, 821, 870, 1861, 1877 |
| HpySE526I | ACGT | 2 cut(s) | 937, 1446 |
| Hsp92I | GRCGYC | 1 cut(s) | 1665 |
| HspAI | GCGC | 1 cut(s) | 1665 |
| KasI | GGCGCC | 1 cut(s) | 1664 |
| KflI | GGGWCCC | 1 cut(s) | 1701 |
| KpnI | GGTACC | 1 cut(s) | 25 |
| KroI | GCCGGC | 1 cut(s) | 753 |
| KroNI | GCCGGC | 1 cut(s) | 755 |
| Ksp22I | TGATCA | 2 cut(s) | 1429, 1908 |
| KspAI | GTTAAC | 2 cut(s) | 231, 327 |
| LguI | GCTCTTC | 1 cut(s) | 969 |
| LmnI | GCTCC | 3 cut(s) | 421, 834, 1526 |
| Lsp1109I | GCAGC | 5 cut(s) | 926, 1631, 1894, 2065, 2102 |
| LweI | GCATC | 4 cut(s) | 170, 1061, 1831, 2048 |
| MaeI | CTAG | 4 cut(s) | 813, 956, 2057, 2146 |
| MaeII | ACGT | 2 cut(s) | 937, 1446 |
| MaeIII | GTNAC | 4 cut(s) | 877, 1246, 1348, 1828 |
| MboII | GAAGA | 8 cut(s) | 233, 283, 299, 986, 1034, 1109, 1601, 1796 |
| MfeI | CAATTG | 1 cut(s) | 2007 |
| MflI | RGATCY | 2 cut(s) | 1502, 1943 |
| MhlI | GDGCHC | 2 cut(s) | 808, 981 |
| MlsI | TGGCCA | 2 cut(s) | 568, 1613 |
| MluNI | TGGCCA | 2 cut(s) | 568, 1613 |
| Mly113I | GGCGCC | 1 cut(s) | 1665 |
| MlyI | GAGTC | 1 cut(s) | 716 |
| Mox20I | TGGCCA | 2 cut(s) | 568, 1613 |
| Mph1103I | ATGCAT | 4 cut(s) | 906, 1269, 1521, 2041 |
| MroNI | GCCGGC | 1 cut(s) | 753 |
| MroXI | GAANNNNTTC | 5 cut(s) | 37, 187, 1302, 1897, 2130 |
| MscI | TGGCCA | 2 cut(s) | 568, 1613 |
| MseI | TTAA | 7 cut(s) | 230, 326, 627, 743, 1059, 1995, 2072 |
| MslI | CAYNNNNRTG | 2 cut(s) | 48, 1673 |
| Msp20I | TGGCCA | 2 cut(s) | 568, 1613 |
| MspI | CCGG | 3 cut(s) | 754, 2018, 2116 |
| MspR9I | CCNGG | 2 cut(s) | 123, 570 |
| MunI | CAATTG | 1 cut(s) | 2007 |
| Mva1269I | GAATGC | 2 cut(s) | 1269, 1529 |
| MvaI | CCWGG | 2 cut(s) | 123, 570 |
| MvnI | CGCG | 1 cut(s) | 349 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 14, 371, 803, 1367, 1619, 1879, 2096 |
| NaeI | GCCGGC | 1 cut(s) | 755 |
| NarI | GGCGCC | 1 cut(s) | 1665 |
| NcoI | CCATGG | 1 cut(s) | 49 |
| NdeI | CATATG | 2 cut(s) | 457, 1269 |
| NgoMIV | GCCGGC | 1 cut(s) | 753 |
| NheI | GCTAGC | 1 cut(s) | 2056 |
| NsiI | ATGCAT | 4 cut(s) | 906, 1269, 1521, 2041 |
| NspI | RCATGY | 4 cut(s) | 113, 904, 1374, 2039 |
| NspV | TTCGAA | 1 cut(s) | 850 |
| PaeI | GCATGC | 2 cut(s) | 904, 2039 |
| PagI | TCATGA | 1 cut(s) | 1441 |
| PciSI | GCTCTTC | 1 cut(s) | 969 |
| PctI | GAATGC | 2 cut(s) | 1269, 1529 |
| PdiI | GCCGGC | 1 cut(s) | 755 |
| PdmI | GAANNNNTTC | 5 cut(s) | 37, 187, 1302, 1897, 2130 |
| PfeI | GAWTC | 3 cut(s) | 33, 245, 2119 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 575, 1130 |
| PfoI | TCCNGGA | 1 cut(s) | 121 |
| PkrI | GCNGC | 6 cut(s) | 10, 916, 1621, 1884, 2055, 2092 |
| PleI | GAGTC | 1 cut(s) | 716 |
| PluTI | GGCGCC | 1 cut(s) | 1668 |
| PmaCI | CACGTG | 1 cut(s) | 938 |
| PmlI | CACGTG | 1 cut(s) | 938 |
| PpsI | GAGTC | 1 cut(s) | 716 |
| Ppu21I | YACGTR | 1 cut(s) | 938 |
| PpuMI | RGGWCCY | 2 cut(s) | 1070, 1701 |
| Psp124BI | GAGCTC | 1 cut(s) | 981 |
| Psp5II | RGGWCCY | 2 cut(s) | 1070, 1701 |
| Psp6I | CCWGG | 2 cut(s) | 121, 568 |
| PspCI | CACGTG | 1 cut(s) | 938 |
| PspFI | CCCAGC | 1 cut(s) | 17 |
| PspGI | CCWGG | 2 cut(s) | 121, 568 |
| PspPI | GGNCC | 9 cut(s) | 487, 527, 785, 950, 998, 1070, 1511, 1681, 1701 |
| PspPPI | RGGWCCY | 2 cut(s) | 1070, 1701 |
| PstI | CTGCAG | 1 cut(s) | 1621 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1838 |
| PsuI | RGATCY | 2 cut(s) | 1502, 1943 |
| RsaI | GTAC | 4 cut(s) | 23, 137, 495, 817 |
| RsaNI | GTAC | 4 cut(s) | 22, 136, 494, 816 |
| RseI | CAYNNNNRTG | 2 cut(s) | 48, 1673 |
| SacI | GAGCTC | 1 cut(s) | 981 |
| SapI | GCTCTTC | 1 cut(s) | 969 |
| SaqAI | TTAA | 7 cut(s) | 230, 326, 627, 743, 1059, 1995, 2072 |
| SatI | GCNGC | 6 cut(s) | 9, 915, 1620, 1883, 2054, 2091 |
| Sau96I | GGNCC | 9 cut(s) | 487, 527, 785, 950, 998, 1070, 1511, 1681, 1701 |
| SchI | GAGTC | 1 cut(s) | 716 |
| ScrFI | CCNGG | 2 cut(s) | 123, 570 |
| SduI | GDGCHC | 2 cut(s) | 808, 981 |
| SfaNI | GCATC | 4 cut(s) | 170, 1061, 1831, 2048 |
| SfcI | CTRYAG | 1 cut(s) | 1617 |
| SfoI | GGCGCC | 1 cut(s) | 1666 |
| SfuI | TTCGAA | 1 cut(s) | 850 |
| SinI | GGWCC | 7 cut(s) | 527, 785, 950, 1070, 1511, 1681, 1701 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 48, 1673 |
| SmlI | CTYRAG | 1 cut(s) | 1790 |
| SmoI | CTYRAG | 1 cut(s) | 1790 |
| SphI | GCATGC | 2 cut(s) | 904, 2039 |
| SsiI | CCGC | 2 cut(s) | 484, 1736 |
| SspDI | GGCGCC | 1 cut(s) | 1664 |
| SspMI | CTAG | 4 cut(s) | 813, 956, 2057, 2146 |
| SstI | GAGCTC | 1 cut(s) | 981 |
| StyD4I | CCNGG | 2 cut(s) | 121, 568 |
| StyI | CCWWGG | 3 cut(s) | 49, 165, 1658 |
| TaaI | ACNGT | 8 cut(s) | 300, 391, 1167, 1181, 1252, 1834, 1915, 1959 |
| TaiI | ACGT | 2 cut(s) | 940, 1449 |
| TaqI | TCGA | 6 cut(s) | 181, 505, 538, 850, 1533, 1891 |
| TaqII | GACCGA | 2 cut(s) | 938, 1788 |
| TfiI | GAWTC | 3 cut(s) | 33, 245, 2119 |
| Tru1I | TTAA | 7 cut(s) | 230, 326, 627, 743, 1059, 1995, 2072 |
| Tru9I | TTAA | 7 cut(s) | 230, 326, 627, 743, 1059, 1995, 2072 |
| TscAI | CASTG | 6 cut(s) | 111, 381, 1473, 1621, 1702, 1821 |
| TseI | GCWGC | 6 cut(s) | 8, 914, 1619, 1882, 2053, 2090 |
| TspGWI | ACGGA | 5 cut(s) | 136, 305, 1109, 1678, 1989 |
| TspRI | CASTG | 6 cut(s) | 111, 381, 1473, 1621, 1702, 1821 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 575, 1130 |
| VpaK11BI | GGWCC | 7 cut(s) | 527, 785, 950, 1070, 1511, 1681, 1701 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 850 |
| XapI | RAATTY | 4 cut(s) | 97, 116, 1461, 1728 |
| XceI | RCATGY | 4 cut(s) | 113, 904, 1374, 2039 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 373, 1675 |
| XmiI | GTMKAC | 1 cut(s) | 1406 |
| XmnI | GAANNNNTTC | 5 cut(s) | 37, 187, 1302, 1897, 2130 |
| XspI | CTAG | 4 cut(s) | 813, 956, 2057, 2146 |
| Zsp2I | ATGCAT | 4 cut(s) | 906, 1269, 1521, 2041 |