Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0007296

Physical Location & Seq

Genomic Coordinates Reverse (-)

59232032 .. 59237326

Gene Structure 5295 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG394000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGCAGGAAATAGTCACTCAAATATGTTCGCTACCTGATAGTGGTGAATTCTTCCCAGAAGAAGTCTCGACACCCATTCTCGATTCAGTTGAAAATCCTATGCACCTGAAGAACTTGTCCCTTAAAGAACTGAAGCAATTATCTGATGAAATCCGTTTAGAGTTATCATCTATAATGCTGAAAACACGGAAGTCTTTTAAAGCCAGTTTGGCAGTAGCGGAGTTGACAATTGCAATACACCATGTTTTCCATGCACCGGTTGATAAGATACTATGGGATGCTATAGAACAAACATATGCTCATAAAATTCTAACAGGACGGCGGGCCCTCATACATACTCTGCAAAGAAATGGTCTTTCTGGTTCTACATCACATCCTGAGAGTGAATATGATCCATTTGGGGCAGGGCATGGGTGCAACAGTGTTTCAGCTGGACTTGGGATGGCAATTGCACGGGATTTAAAAGGGAAACGAGAGCGTATTGTTACAGTCATCAGCAATGGTACAACTATGGCTGGTCAAGTCTATGAGGCGATGGGTAATGCAGGGTATTTTGACTCGAATATGCTAGTTATTTTAAATGACAGTAGGCATTCTTTACACCCAAAGATTGAAGAGGGCCCCAAGACATCTATTACTGCTCTATCCAGTACCCTAAGCAAGCTCCAGTCAAGTAAATCCTTTCGGAAATTTAGAGAAGTTGCTAAGGATGTTACTAAAAGAATCGGTATGCATGAATTGGCAGCTAAAGTTGATGAGTATGCACGTGGTATGGTGGGTCCACCAGGAGCAACTCTTTTTGAAGAGCTTGGATTGTATTACATTGGTCCTGTTGATGGACACAACATTGAAGACCTGATTTGTGTTCTACAACAAGTGGCATCTTTGAATTCAATGGGTCCTGTTTTGGTTCATGTTATAACAGAAGAAAATCGGGGAGTGGAAAACAACCCGAAGCTTGAGGGGGCATACAAGCAGCAGGAAGGTTTAAGTAGTTCTGATGATTTAGCGTCCAGAATGCACCGTAGAACTTATAGCGACTGCTTTGTGGAGGCTTTAGTTATAGAGGCAGAGCAGGACAAAGATATCGTGACTGTTCATGCTGGGATGCACATGGAAGCATCATTTGAACTATTCCGTGACCGATTTCCTGATAAGTTTTTCGATGTGGGAATGGCTGAGCAACATGCAGTTACTTTTTCTGCTGGTTTGTCACGTGGAGGGCTGAAGCCATTTTGCATAATCCCTTCTGCATTTCTACAAAGAGCTTATGATCAGGTAGTTCATGATGTAGATCGGCAAAGAATTCCAGTGCGTTTTGCCATAACAAGTGCAGGCTTGGTAGGATCCGATGGTCCCATGCAGTGTGGGGCATTTGATATAACATTTATGTCATGCTTACCCAACATGATTGTCATGGCACCATCCAATGAGGATGAGCTTGCCAACATGGTGGCCACTGCAGCCCGCATTGATGATCGTCCAGTTTGCTTCCGATATCCAAGGGGTGCCATTGTTGGGATGGATCATTCAATTTGCAGTGGGATGCCCATCGAGATTGGAAAAGGGAAAGTTCTTGCAGAAGGTAAAGATGTGGCTTTGCTTGGATATGGATCGATGGTTCAGAACTGCCTTAAGGCTCGGTCTCTTCTTTCGAAGCTTGGCATTGAGGTAACCGTTGCTGATGCGAGGTTCTGCAAGCCCTTAGATATTAAGCTTCTTAGGCAGCTTTGTGAAAACCATTCATTTCTGATCACGGTTGAGGAAGGGTCTATTGGAGGATTTGGATCCCATGTTGCACAGTTCTTTGCGCTCGATGGACAGCTTGATGGAAAAATTAAGTGGCGACCGATTGTTTTACCAGACAACTACATTGAGCAGGCATCCCCAAGTGAACAACTAGCTATTGCTGGGCTGACTGGACACCACATTGCTGCAACAGCGTTAAGTCTGCTTGGCCGAAATCGTGAAGCCCTCCACTTAATGTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00730 ko00900 ko01100 ko01110 ko01130 map00730 map00900 map01100 map01110 map01130

Pfam Domains

Protein Families

DXP_synthase_N Transket_pyr Transketolase_C

Protein Analysis

663

Amino Acids

72.58

Weight (kDa)

5.96

Isoelectric Point (pI)

41.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DXP_synthase_N	PF13292	27 - 308	2.7e-76	1-deoxy-D-xylulose-5-phosphate synthase
Transket_pyr	PF02779	344 - 504	6.7e-33	Transketolase, pyrimidine binding domain
Transketolase_C	PF02780	521 - 644	3.2e-30	Transketolase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11380 AT5G11380 AT5G11380 AT5G11380
fragaria_vesca	FvH4_2g29720 FvH4_2g29720 FvH4_2g29720 FvH4_2g29720 FvH4_2g29720
malus_domestica	MD08G1142600.v1.1 MD15G1119100.v1.1
prunus_persica	Prupe.1G472400_v2.0.a1 Prupe.1G472400_v2.0.a1
pyrus_communis	pycom08g12140 pycom15g10730
rosa_chinensis	RchiOBHm_Chr6g0298741
rosa_laevigata	RLG00000011490
rosa_multiflora	Rmu_sc0013512.1_g000004
rosa_roxburghii	Rroxscaffold_7G00169380
rosa_rugosa	Rorug06G0282800
rosa_samantha	Rh6AG394000 Rh6BG401800 Rh6CG407700 Rh6DG394300
rosa_wichuraiana	Rw6G034460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	920
AccB1I	GGYRCC	2 cut(s)	1420, 1508
AciI	CCGC	3 cut(s)	218, 322, 1468
AclWI	GGATC	7 cut(s)	386, 1341, 1354, 1533, 1621, 1782, 1795
AcoI	YGGCCR	2 cut(s)	1455, 1957
AcsI	RAATTY	5 cut(s)	47, 306, 689, 889, 1305
AcuI	CTGAAG	3 cut(s)	128, 152, 1247
AcvI	CACGTG	2 cut(s)	767, 1217
AfaI	GTAC	2 cut(s)	505, 652
AfiI	CCNNNNNNNGG	4 cut(s)	41, 256, 836, 1518
AflII	CTTAAG	1 cut(s)	1634
AgeI	ACCGGT	1 cut(s)	256
AgsI	TTSAA	8 cut(s)	92, 614, 803, 851, 889, 894, 1130, 1533
AjnI	CCWGG	1 cut(s)	784
AjuI	GAANNNNNNNTTGG	2 cut(s)	1758, 1790
AloI	GAACNNNNNNTCC	2 cut(s)	1605, 1637
Alw26I	GTCTC	2 cut(s)	70, 1650
AlwI	GGATC	7 cut(s)	386, 1341, 1354, 1533, 1621, 1782, 1795
AoxI	GGCC	4 cut(s)	324, 619, 1455, 1957
ApaI	GGGCCC	2 cut(s)	328, 623
ApeKI	GCWGC	5 cut(s)	743, 976, 1463, 1726, 1934
ApoI	RAATTY	5 cut(s)	47, 306, 689, 889, 1305
ArsI	GACNNNNNNTTYG	2 cut(s)	337, 369
AsiGI	ACCGGT	1 cut(s)	256
AspLEI	GCGC	1 cut(s)	1813
AspS9I	GGNCC	8 cut(s)	324, 325, 619, 620, 779, 827, 899, 1355
AsuHPI	GGTGA	1 cut(s)	56
AsuII	TTCGAA	1 cut(s)	1655
AvaII	GGWCC	4 cut(s)	779, 827, 899, 1355
BaeGI	GKGCMC	2 cut(s)	328, 623
BalI	TGGCCA	1 cut(s)	1457
BamHI	GGATCC	2 cut(s)	1346, 1787
BanI	GGYRCC	2 cut(s)	1420, 1508
BanII	GRGCYC	2 cut(s)	328, 623
BbrPI	CACGTG	2 cut(s)	767, 1217
BbsI	GAAGAC	1 cut(s)	858
BbvI	GCAGC	5 cut(s)	755, 988, 1475, 1738, 1921
BceAI	ACGGC	1 cut(s)	335
BciT130I	CCWGG	1 cut(s)	786
BclI	TGATCA	2 cut(s)	1273, 1752
BcoDI	GTCTC	2 cut(s)	70, 1650
BfaI	CTAG	3 cut(s)	569, 1901, 1990
BfmI	CTRYAG	2 cut(s)	282, 1461
BfrI	CTTAAG	1 cut(s)	1634
BglI	GCCNNNNNGGC	1 cut(s)	209
BisI	GCNGC	5 cut(s)	744, 977, 1464, 1727, 1935
BlpI	GCTNAGC	1 cut(s)	1179
BlsI	GCNGC	5 cut(s)	745, 978, 1465, 1728, 1936
Bme1390I	CCNGG	1 cut(s)	786
Bme18I	GGWCC	4 cut(s)	779, 827, 899, 1355
BmgT120I	GGNCC	8 cut(s)	324, 325, 619, 620, 779, 827, 899, 1355
BmrFI	CCNGG	1 cut(s)	786
BmsI	GCATC	7 cut(s)	268, 890, 1098, 1130, 1536, 1675, 1892
BpiI	GAAGAC	1 cut(s)	858
BpmI	CTGGAG	1 cut(s)	650
Bpu10I	CCTNAGC	2 cut(s)	656, 705
Bpu1102I	GCTNAGC	1 cut(s)	1179
Bpu14I	TTCGAA	1 cut(s)	1655
BpuEI	CTTGAG	1 cut(s)	980
Bsa29I	ATCGAT	1 cut(s)	1616
BsaAI	YACGTR	2 cut(s)	767, 1217
BsaBI	GATNNNNATC	4 cut(s)	1293, 1550, 1612, 1786
BsaI	GGTCTC	1 cut(s)	1650
BsaJI	CCNNGG	1 cut(s)	1502
BsaWI	WCCGGW	1 cut(s)	256
Bsc4I	CCNNNNNNNGG	4 cut(s)	41, 256, 836, 1518
Bse118I	RCCGGY	1 cut(s)	256
Bse1I	ACTGG	6 cut(s)	204, 648, 667, 1310, 1484, 1924
Bse3DI	GCAATG	2 cut(s)	505, 1929
Bse8I	GATNNNNATC	4 cut(s)	1293, 1550, 1612, 1786
BseBI	CCWGG	1 cut(s)	786
BseCI	ATCGAT	1 cut(s)	1616
BseDI	CCNNGG	1 cut(s)	1502
BseJI	GATNNNNATC	4 cut(s)	1293, 1550, 1612, 1786
BseLI	CCNNNNNNNGG	4 cut(s)	41, 256, 836, 1518
BseMI	GCAATG	2 cut(s)	505, 1929
BseMII	CTCAG	2 cut(s)	369, 1170
BseNI	ACTGG	6 cut(s)	204, 648, 667, 1310, 1484, 1924
BseSI	GKGCMC	2 cut(s)	328, 623
BseXI	GCAGC	5 cut(s)	755, 988, 1475, 1738, 1921
BseYI	CCCAGC	2 cut(s)	1103, 1910
BsgI	GTGCAG	1 cut(s)	1353
Bsh1285I	CGRYCG	1 cut(s)	1850
BshFI	GGCC	4 cut(s)	326, 621, 1457, 1959
BshNI	GGYRCC	2 cut(s)	1420, 1508
BshTI	ACCGGT	1 cut(s)	256
BshVI	ATCGAT	1 cut(s)	1616
BsiEI	CGRYCG	1 cut(s)	1850
BsiSI	CCGG	1 cut(s)	257
BslFI	GGGAC	2 cut(s)	103, 1341
BslI	CCNNNNNNNGG	4 cut(s)	41, 256, 836, 1518
BsmAI	GTCTC	2 cut(s)	70, 1650
BsmFI	GGGAC	2 cut(s)	103, 1341
BsmI	GAATGC	2 cut(s)	592, 1023
BsnI	GGCC	4 cut(s)	326, 621, 1457, 1959
Bso31I	GGTCTC	1 cut(s)	1650
Bsp119I	TTCGAA	1 cut(s)	1655
Bsp120I	GGGCCC	2 cut(s)	324, 619
Bsp1286I	GDGCHC	2 cut(s)	328, 623
Bsp143I	GATC	9 cut(s)	391, 1273, 1294, 1346, 1477, 1525, 1613, 1752, 1787
Bsp1720I	GCTNAGC	1 cut(s)	1179
BspACI	CCGC	3 cut(s)	218, 322, 1468
BspANI	GGCC	4 cut(s)	326, 621, 1457, 1959
BspCNI	CTCAG	2 cut(s)	370, 1171
BspDI	ATCGAT	1 cut(s)	1616
BspHI	TCATGA	1 cut(s)	1285
BspMAI	CTGCAG	1 cut(s)	1465
BspPI	GGATC	7 cut(s)	386, 1341, 1354, 1533, 1621, 1782, 1795
BspQI	GCTCTTC	1 cut(s)	798
BspT104I	TTCGAA	1 cut(s)	1655
BspT107I	GGYRCC	2 cut(s)	1420, 1508
BspTI	CTTAAG	1 cut(s)	1634
BspTNI	GGTCTC	1 cut(s)	1650
BsrDI	GCAATG	2 cut(s)	505, 1929
BsrFI	RCCGGY	1 cut(s)	256
BsrI	ACTGG	6 cut(s)	204, 648, 667, 1310, 1484, 1924
BssAI	RCCGGY	1 cut(s)	256
BssECI	CCNNGG	1 cut(s)	1502
BssMI	GATC	9 cut(s)	391, 1273, 1294, 1346, 1477, 1525, 1613, 1752, 1787
BssT1I	CCWWGG	1 cut(s)	1502
Bst2UI	CCWGG	1 cut(s)	786
Bst4CI	ACNGT	8 cut(s)	422, 490, 587, 1025, 1096, 1678, 1759, 1803
Bst6I	CTCTTC	3 cut(s)	609, 798, 1653
BstAFI	CTTAAG	1 cut(s)	1634
BstBAI	YACGTR	2 cut(s)	767, 1217
BstBI	TTCGAA	1 cut(s)	1655
BstC8I	GCNNGC	7 cut(s)	324, 662, 1336, 1443, 1468, 1700, 1881
BstDEI	CTNAG	6 cut(s)	378, 656, 705, 1179, 1705, 1721
BstEII	GGTNACC	1 cut(s)	1672
BstHHI	GCGC	1 cut(s)	1813
BstKTI	GATC	9 cut(s)	394, 1276, 1297, 1349, 1480, 1528, 1616, 1755, 1790
BstMAI	GTCTC	2 cut(s)	70, 1650
BstMBI	GATC	9 cut(s)	391, 1273, 1294, 1346, 1477, 1525, 1613, 1752, 1787
BstMCI	CGRYCG	1 cut(s)	1850
BstMWI	GCNNNNNNNGC	4 cut(s)	209, 1463, 1723, 1940
BstNI	CCWGG	1 cut(s)	786
BstNSI	RCATGY	1 cut(s)	1190
BstPI	GGTNACC	1 cut(s)	1672
BstSCI	CCNGG	1 cut(s)	784
BstSFI	CTRYAG	2 cut(s)	282, 1461
BstSLI	GKGCMC	2 cut(s)	328, 623
BstV1I	GCAGC	5 cut(s)	755, 988, 1475, 1738, 1921
BstV2I	GAAGAC	1 cut(s)	858
BstX2I	RGATCY	2 cut(s)	1346, 1787
BstXI	CCANNNNNNTGG	1 cut(s)	1453
BstYI	RGATCY	2 cut(s)	1346, 1787
Bsu15I	ATCGAT	1 cut(s)	1616
BsuRI	GGCC	4 cut(s)	326, 621, 1457, 1959
BsuTUI	ATCGAT	1 cut(s)	1616
BtgZI	GCGATG	1 cut(s)	548
BtsI	GCAGTG	3 cut(s)	1370, 1458, 1546
BtsIMutI	CAGTG	5 cut(s)	427, 1317, 1370, 1458, 1546
Cac8I	GCNNGC	7 cut(s)	324, 662, 1336, 1443, 1468, 1700, 1881
CciI	TCATGA	1 cut(s)	1285
CfoI	GCGC	1 cut(s)	1813
Cfr10I	RCCGGY	1 cut(s)	256
Cfr13I	GGNCC	8 cut(s)	324, 325, 619, 620, 779, 827, 899, 1355
ClaI	ATCGAT	1 cut(s)	1616
CseI	GACGC	1 cut(s)	999
Csp6I	GTAC	2 cut(s)	504, 651
CspAI	ACCGGT	1 cut(s)	256
CviQI	GTAC	2 cut(s)	504, 651
DdeI	CTNAG	6 cut(s)	378, 656, 705, 1179, 1705, 1721
DpnI	GATC	9 cut(s)	393, 1275, 1296, 1348, 1479, 1527, 1615, 1754, 1789
DpnII	GATC	9 cut(s)	391, 1273, 1294, 1346, 1477, 1525, 1613, 1752, 1787
DraI	TTTAAA	3 cut(s)	199, 462, 579
EaeI	YGGCCR	2 cut(s)	1455, 1957
Eam1104I	CTCTTC	3 cut(s)	609, 798, 1653
EarI	CTCTTC	3 cut(s)	609, 798, 1653
Eco130I	CCWWGG	1 cut(s)	1502
Eco24I	GRGCYC	2 cut(s)	328, 623
Eco31I	GGTCTC	1 cut(s)	1650
Eco32I	GATATC	2 cut(s)	1087, 1499
Eco47I	GGWCC	4 cut(s)	779, 827, 899, 1355
Eco57I	CTGAAG	3 cut(s)	128, 152, 1247
Eco72I	CACGTG	2 cut(s)	767, 1217
Eco91I	GGTNACC	1 cut(s)	1672
EcoO109I	RGGNCCY	4 cut(s)	325, 619, 620, 899
EcoO65I	GGTNACC	1 cut(s)	1672
EcoRI	GAATTC	3 cut(s)	47, 889, 1305
EcoRII	CCWGG	1 cut(s)	784
EcoRV	GATATC	2 cut(s)	1087, 1499
EcoT14I	CCWWGG	1 cut(s)	1502
EcoT22I	ATGCAT	1 cut(s)	735
EcoT38I	GRGCYC	2 cut(s)	328, 623
ErhI	CCWWGG	1 cut(s)	1502
FaqI	GGGAC	2 cut(s)	103, 1341
FauI	CCCGC	2 cut(s)	315, 1475
FauNDI	CATATG	1 cut(s)	295
FbaI	TGATCA	2 cut(s)	1273, 1752
Fnu4HI	GCNGC	5 cut(s)	744, 977, 1464, 1727, 1935
FriOI	GRGCYC	2 cut(s)	328, 623
Fsp4HI	GCNGC	5 cut(s)	744, 977, 1464, 1727, 1935
FspBI	CTAG	3 cut(s)	569, 1901, 1990
GlaI	GCGC	1 cut(s)	1812
GluI	GCNGC	5 cut(s)	744, 977, 1464, 1727, 1935
GsaI	CCCAGC	2 cut(s)	1107, 1914
GsuI	CTGGAG	1 cut(s)	650
HaeIII	GGCC	4 cut(s)	326, 621, 1457, 1959
HapII	CCGG	1 cut(s)	257
HgaI	GACGC	1 cut(s)	999
HhaI	GCGC	1 cut(s)	1813
Hin6I	GCGC	1 cut(s)	1811
HinP1I	GCGC	1 cut(s)	1811
HincII	GTYRAC	1 cut(s)	225
HindII	GTYRAC	1 cut(s)	225
HindIII	AAGCTT	3 cut(s)	956, 1658, 1715
HinfI	GANTC	3 cut(s)	83, 557, 723
HpaII	CCGG	1 cut(s)	257
HphI	GGTGA	1 cut(s)	56
Hpy166II	GTNNAC	3 cut(s)	225, 782, 1895
Hpy188I	TCNGA	7 cut(s)	145, 687, 1000, 1351, 1496, 1626, 1752
Hpy188III	TCNNGA	9 cut(s)	67, 80, 377, 1014, 1090, 1151, 1286, 1555, 1967
Hpy8I	GTNNAC	3 cut(s)	225, 782, 1895
HpyAV	CCTTC	4 cut(s)	977, 1257, 1577, 1760
HpyCH4III	ACNGT	8 cut(s)	422, 490, 587, 1025, 1096, 1678, 1759, 1803
HpyCH4IV	ACGT	2 cut(s)	766, 1216
HpyF10VI	GCNNNNNNNGC	4 cut(s)	209, 1463, 1723, 1940
HpyF3I	CTNAG	6 cut(s)	378, 656, 705, 1179, 1705, 1721
HpySE526I	ACGT	2 cut(s)	766, 1216
HspAI	GCGC	1 cut(s)	1811
Ksp22I	TGATCA	2 cut(s)	1273, 1752
Kzo9I	GATC	9 cut(s)	391, 1273, 1294, 1346, 1477, 1525, 1613, 1752, 1787
LguI	GCTCTTC	1 cut(s)	798
LmnI	GCTCC	2 cut(s)	669, 788
Lsp1109I	GCAGC	5 cut(s)	755, 988, 1475, 1738, 1921
LweI	GCATC	7 cut(s)	268, 890, 1098, 1130, 1536, 1675, 1892
MaeI	CTAG	3 cut(s)	569, 1901, 1990
MaeII	ACGT	2 cut(s)	766, 1216
MaeIII	GTNAC	8 cut(s)	13, 484, 712, 1090, 1139, 1192, 1212, 1672
MalI	GATC	9 cut(s)	393, 1275, 1296, 1348, 1479, 1527, 1615, 1754, 1789
MboI	GATC	9 cut(s)	391, 1273, 1294, 1346, 1477, 1525, 1613, 1752, 1787
MboII	GAAGA	8 cut(s)	43, 71, 121, 626, 815, 863, 938, 1640
MfeI	CAATTG	2 cut(s)	228, 447
MflI	RGATCY	2 cut(s)	1346, 1787
MhlI	GDGCHC	2 cut(s)	328, 623
MlsI	TGGCCA	1 cut(s)	1457
MluNI	TGGCCA	1 cut(s)	1457
MlyI	GAGTC	1 cut(s)	551
Mox20I	TGGCCA	1 cut(s)	1457
Mph1103I	ATGCAT	1 cut(s)	735
MscI	TGGCCA	1 cut(s)	1457
Msp20I	TGGCCA	1 cut(s)	1457
MspA1I	CMGCKG	1 cut(s)	431
MspCI	CTTAAG	1 cut(s)	1634
MspI	CCGG	1 cut(s)	257
MspR9I	CCNGG	1 cut(s)	786
MunI	CAATTG	2 cut(s)	228, 447
Mva1269I	GAATGC	2 cut(s)	592, 1023
MvaI	CCWGG	1 cut(s)	786
MwoI	GCNNNNNNNGC	4 cut(s)	209, 1463, 1723, 1940
NdeI	CATATG	1 cut(s)	295
NdeII	GATC	9 cut(s)	391, 1273, 1294, 1346, 1477, 1525, 1613, 1752, 1787
NmuCI	GTSAC	4 cut(s)	13, 1090, 1139, 1212
NsiI	ATGCAT	1 cut(s)	735
NspI	RCATGY	1 cut(s)	1190
NspV	TTCGAA	1 cut(s)	1655
PagI	TCATGA	1 cut(s)	1285
PciSI	GCTCTTC	1 cut(s)	798
PctI	GAATGC	2 cut(s)	592, 1023
PfeI	GAWTC	2 cut(s)	83, 723
PinAI	ACCGGT	1 cut(s)	256
PkrI	GCNGC	5 cut(s)	745, 978, 1465, 1728, 1936
PleI	GAGTC	1 cut(s)	551
PmaCI	CACGTG	2 cut(s)	767, 1217
PmlI	CACGTG	2 cut(s)	767, 1217
PpsI	GAGTC	1 cut(s)	551
Ppu21I	YACGTR	2 cut(s)	767, 1217
PpuMI	RGGWCCY	1 cut(s)	899
PsiI	TTATAA	1 cut(s)	920
Psp5II	RGGWCCY	1 cut(s)	899
Psp6I	CCWGG	1 cut(s)	784
PspCI	CACGTG	2 cut(s)	767, 1217
PspEI	GGTNACC	1 cut(s)	1672
PspFI	CCCAGC	2 cut(s)	1103, 1910
PspGI	CCWGG	1 cut(s)	784
PspOMI	GGGCCC	2 cut(s)	324, 619
PspPI	GGNCC	8 cut(s)	324, 325, 619, 620, 779, 827, 899, 1355
PspPPI	RGGWCCY	1 cut(s)	899
PstI	CTGCAG	1 cut(s)	1465
PsuI	RGATCY	2 cut(s)	1346, 1787
PvuII	CAGCTG	1 cut(s)	431
RsaI	GTAC	2 cut(s)	505, 652
RsaNI	GTAC	2 cut(s)	504, 651
SapI	GCTCTTC	1 cut(s)	798
SatI	GCNGC	5 cut(s)	744, 977, 1464, 1727, 1935
Sau3AI	GATC	9 cut(s)	391, 1273, 1294, 1346, 1477, 1525, 1613, 1752, 1787
Sau96I	GGNCC	8 cut(s)	324, 325, 619, 620, 779, 827, 899, 1355
SchI	GAGTC	1 cut(s)	551
ScrFI	CCNGG	1 cut(s)	786
SduI	GDGCHC	2 cut(s)	328, 623
SfaNI	GCATC	7 cut(s)	268, 890, 1098, 1130, 1536, 1675, 1892
SfcI	CTRYAG	2 cut(s)	282, 1461
SfuI	TTCGAA	1 cut(s)	1655
SinI	GGWCC	4 cut(s)	779, 827, 899, 1355
SmlI	CTYRAG	2 cut(s)	959, 1634
SmoI	CTYRAG	2 cut(s)	959, 1634
SsiI	CCGC	3 cut(s)	218, 322, 1468
SspMI	CTAG	3 cut(s)	569, 1901, 1990
StyD4I	CCNGG	1 cut(s)	784
StyI	CCWWGG	1 cut(s)	1502
TaaI	ACNGT	8 cut(s)	422, 490, 587, 1025, 1096, 1678, 1759, 1803
TaiI	ACGT	2 cut(s)	769, 1219
TaqI	TCGA	8 cut(s)	68, 81, 560, 1164, 1554, 1616, 1655, 1815
TaqII	GACCGA	3 cut(s)	1158, 1632, 1864
TfiI	GAWTC	2 cut(s)	83, 723
TscAI	CASTG	5 cut(s)	427, 1317, 1370, 1465, 1546
TseFI	GTSAC	4 cut(s)	13, 1090, 1139, 1212
TseI	GCWGC	5 cut(s)	743, 976, 1463, 1726, 1934
Tsp45I	GTSAC	4 cut(s)	13, 1090, 1139, 1212
TspDTI	ATGAA	6 cut(s)	162, 750, 902, 1088, 1274, 1734
TspGWI	ACGGA	3 cut(s)	143, 202, 1127
TspRI	CASTG	5 cut(s)	427, 1317, 1370, 1465, 1546
Vha464I	CTTAAG	1 cut(s)	1634
VpaK11BI	GGWCC	4 cut(s)	779, 827, 899, 1355
XapI	RAATTY	5 cut(s)	47, 306, 689, 889, 1305
XceI	RCATGY	1 cut(s)	1190
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1519
XspI	CTAG	3 cut(s)	569, 1901, 1990
Zsp2I	ATGCAT	1 cut(s)	735

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.