AT5G11560

ER membrane protein complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0011093
Physical Location & Seq
Reverse (-)
3709442 .. 3714124
4683 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G11560.1

Sequence Viewer

Length: 2949 bp
ATGGCGATTAGGGTTTTTCTTACCCTTCTCCTCTTCTTATCATCTGCAATTCTATCTTTCTCTCTTTATGAAGATCAAGCCGGCCTCACTGATTGGCACCAAAGGTACATTGGGAAAGTGAAGCATGCAGTATTCCACACTCAAAAGACTGGAAGAAAGCGTGTTATCGTCTCAACCGAGGAGAATGTTGTTGCTTCACTTGATCTCAGACATGGGGAGATATTTTGGCGACATGTTCTCGGGACAAAGGACGCTATCGATGGGGTTGGTATTGCCTTGGGAAAATATGTTATCACTCTTTCATCAGAAGGAAGTACTTTAAGAGCCTGGAACCTTCCTGATGGTCAAATGGTGTGGGAAACATCTCTGCATACCGCACAACATTCAAAGTCACTGTTATCAGTACCGATAAATTTGAAGGTTGACAAGGACTACCCTATTACTGTTTTCGGTGGTGGGTACCTTCATGCTGTTTCTGCTATAGATGGTGAGGTCCTCTGGAAAAAGGATTTCACAGCGGAAGGGTTTGAAGTGCAGCGTGTTCTTCAAGCTCCTGGAAGTAGTATAATTTATGTTCTGGGATTCCTTCATTCATCTGAGGCTGTTGTTTATCAGATTGATTCCAAAAGTGGAGAGGTAGTGGCACAAAAAAGTACGGTGTTCCCTGGTGGATTCTCTGGCGAGATTTCATCAGTTTCAAGTGATAAAGTTGTTGTTCTTGATTCAACGAGGTCAATTTTGGTTACTATTGGCTTCATAGATGGAGATATTAGCTTCCAGAAGACCCCTATTTCAGATCTTGTTGAGGATTCTGGAACGGCTGAGATTTTATCACCTCTTCTTAGCAATATGCTTGCTGTAAAAGTCAATAAACGCACTATATTTGTGAACGTCGGTGACAAAGGAAAGTTGGAAGTGGTAGACTCATTATCTGATGAAACAGCCATGAGTGATTCACTTCCAGTTGCAGATGATCAGGAGGCCTTTGCTTCAGTTCATCATGAAGGGAGCAGGATTCACCTCATGGTGAAACTTGTTAATGACTTGAATAATGTATTGCTTAGAGAGACCATTCAGATGGACCAAAATAGGGGACGTGTCCATAAAGTTTTTATGAACAACTATATCAGGACAGACAGGAGTAATGGATTTAGGGCGCTTATTGTGATGGAAGATCACTCACTCTTGTTACTCCAACAAGGAGCGATTGTTTGGAGCAGGGAAGAAGGTCTGGCTTCAGTGACTGATGTTACGACGGCAGAACTCCCTCTGGAAAAAGATGGCGTATCAGTGGCAAAAGTGGAGCACACTCTCTTTGAGTGGCTTAAGGGGCATGTGCTGAAGCTTAAGGGATCCTTGTTGCTAGCAAGCCCAGAGGACGTGGTAGCAATTCAAGATTTGAGGGTGAAGAGTTCTGGGAAGAACAAATTGACCCGTGACCATAATGGCTTTCGGAAATTAATCTTAGCACTTACTCGAGCTGGAAAACTTTTTGCTCTGCACACTGGAGATGGGAGGATTGTCTGGTCCATGCTGCTAAACTCTCCGAGCCAATCACAATCCTGTGAACGTCCAAACGGTGTTAGCTTGTACCAATGGCAGGTCCCTCATCATCACGCCATGGACGAAAATCCCTCGGTGCTTGTAGTTGGCAAGTGCGGATCAGATTCAAGTGCACCCGGTGTACTTTCATTTGTAGATGTGTACACGGGAAAGGAGATCAGCTCATCAGATATTGGTCACTCTGTTGTGCAAGTTATGCCTCTTCCAATTACCGACTCAAAGGAACAACGTTTACATCTAATAGCTGATACAGTTGGCCACGTCCACTTGTATCCGAAAACTTCAGAGGCTCTCAGCATCTTTCAACGCGAGTTTCAAAATGTATATTGGTACACTGTTGAGGCAGATGATGGTATTATCAGAGGACACGTAATGAAGGGCAGTTGCTCTGGTGAGACTGCAGATGAGTACTGCTTTACAACCCGAGAACTTTGGACTGTTGTGTTTCCTTCGGAATCAGAGAAAATCATTTCAACACTAACACGAAAACCTAATGAGGTTGTTCATACACAAGCCAAAGTCAACACAGACCAAGACCTATTGTATAAATATGTATCAAGAAACTTACTGTTTGTGGCCACCGTTTCACCAAAAGGTGCTGGTGAGATTGGCTCAGTTACGCCAGAGGAGTCATCACTCGTAGTATACCTCATTGACACCATCACAGGACGGATACTGCACCGTTTGTCACATCAAGGCTGTCAAGGGCCGGTTCATGCGGTGTTTAGTGAAAATTGGGTTGTTTACCACTATTTCAATCTTCGAGCTCACAAGTACGAGGTTACGGTCGTTGAGATCTATGATCAGTCGAGGGCGGAGAACAAAAATGTGTGGAAACTCATTCTGGGAAAGCACAATCTAACAGCACCCATCACTTCGTACTCTAGGCCAGAGGTGTTTACAAAGTCACAGTCATACTTCTTTGCTCAGTCTGTGAAAACCATTGCGGTGACATCCACAGCAAAGGGTATAACTTCAAAGCAGCTTCTCATTGGTACCATCGGGGATCAGATATTGGCACTTGATAAACGATTTGTGGATCCACGCCGGACACTTAACCCGTCTCAAGCTGAAAAAGAAGAAGGAATCATCCCTCTCACTGATACATTACCCATCATTCCTCAGGCGTATGTTACACACTCCCACAAAGTAGAAGGTCTAAGAGGCATAGTAACAGCTCCGTCCAAGCTAGAGTCAACAACACACGTCTTTGCCTATGGAGTGGATCTCTTCTACACAAGGCTTGCTCCTTCAAAGACCTACGACTCACTAACCGACGATTTCAGCTACGCTCTTCTCCTGATCACGATTGTAGCACTTGTTGCAGCCATCTACATCACATGGGTCCTTTCAGAGAAGAAAGAACTAAGCGAAAAATGGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1620 PQQ_2

Protein Analysis

982

Amino Acids

108.87

Weight (kDa)

6.33

Isoelectric Point (pI)

32.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_EMC1_N PF25293 22 - 409 1e-127 EMC1 N-terminal beta-propeller domain
Beta-prop_ACSF4 PF13570 38 - 332 8.9e-08 Beta-alanine-activating enzyme, beta-propeller
PQQ_2 PF13360 105 - 260 6e-07 Outer membrane protein assembly factor BamB
EMC1_C PF07774 764 - 981 1.9e-69 ER membrane protein complex subunit 1, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011093)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G11560
fragaria_vesca FvH4_2g35850
malus_domestica MD08G1115900.v1.1 MD15G1095600.v1.1
prunus_persica Prupe.1G450600_v2.0.a1 Prupe.1G450600_v2.0.a1
pyrus_communis pycom08g09670 pycom08g09680 pycom15g08790
rosa_chinensis RchiOBHm_Chr6g0305971
rosa_laevigata RLG00000010841
rosa_multiflora Rmu_co8311943.1_g000001 Rmu_sc0001809.1_g000056
rosa_roxburghii Rroxscaffold_7G00162180
rosa_rugosa Rorug06G0345700
rosa_samantha Rh6AG457600 Rh6BG443500 Rh6CG471700 Rh6DG458100
rosa_wichuraiana Rw6G039920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1591
Acc65I GGTACC 2 cut(s) 459, 2558
AccB1I GGYRCC 3 cut(s) 96, 459, 2558
AccI GTMKAC 2 cut(s) 921, 2208
AccII CGCG 1 cut(s) 1872
AciI CCGC 6 cut(s) 375, 518, 1659, 2282, 2378, 2510
AclI AACGTT 1 cut(s) 1792
AclWI GGATC 7 cut(s) 1347, 1360, 1669, 2577, 2597, 2610, 2796
AcoI YGGCCR 2 cut(s) 1819, 2139
AcsI RAATTY 1 cut(s) 412
AcuI CTGAAG 4 cut(s) 975, 1221, 1361, 1830
AdeI CACNNNGTG 1 cut(s) 1682
AfiI CCNNNNNNNGG 2 cut(s) 1090, 1600
AflII CTTAAG 2 cut(s) 1325, 1346
AflIII ACRYGT 4 cut(s) 232, 1096, 1930, 2767
AjiI CACGTC 4 cut(s) 1097, 1381, 1825, 2770
AjnI CCWGG 3 cut(s) 326, 553, 664
Alw21I GWGCWC 3 cut(s) 1308, 1678, 2332
Alw26I GTCTC 4 cut(s) 175, 1061, 1952, 2631
Alw44I GTGCAC 1 cut(s) 1674
AlwI GGATC 7 cut(s) 1347, 1360, 1669, 2577, 2597, 2610, 2796
AlwNI CAGNNNCTG 1 cut(s) 1244
Ama87I CYCGRG 3 cut(s) 239, 1476, 1986
AoxI GGCC 6 cut(s) 82, 981, 1819, 2139, 2270, 2450
ApaLI GTGCAC 1 cut(s) 1674
ApeKI GCWGC 4 cut(s) 535, 1534, 2545, 2888
ApoI RAATTY 1 cut(s) 412
ArsI GACNNNNNNTTYG 2 cut(s) 2459, 2491
AseI ATTAAT 1 cut(s) 1460
Asp718I GGTACC 2 cut(s) 459, 2558
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 6 cut(s) 493, 1081, 1527, 1603, 2270, 2908
AsuC2I CCSGG 1 cut(s) 1680
AsuNHI GCTAGC 1 cut(s) 1363
AvaI CYCGRG 3 cut(s) 239, 1476, 1986
AvaII GGWCC 5 cut(s) 493, 1081, 1527, 1603, 2908
AxyI CCTNAGG 1 cut(s) 2685
BaeGI GKGCMC 1 cut(s) 1678
BalI TGGCCA 2 cut(s) 1821, 2141
BamHI GGATCC 2 cut(s) 1352, 2602
BanI GGYRCC 3 cut(s) 96, 459, 2558
BanII GRGCYC 1 cut(s) 2332
BbsI GAAGAC 1 cut(s) 788
Bbv12I GWGCWC 3 cut(s) 1308, 1678, 2332
BbvI GCAGC 4 cut(s) 547, 1521, 2557, 2900
BceAI ACGGC 2 cut(s) 834, 1272
BciT130I CCWGG 3 cut(s) 328, 555, 666
BciVI GTATCC 2 cut(s) 1845, 2229
BclI TGATCA 3 cut(s) 973, 2365, 2865
BcnI CCSGG 1 cut(s) 1680
BcoDI GTCTC 4 cut(s) 175, 1061, 1952, 2631
BfaI CTAG 3 cut(s) 1364, 2448, 2753
BfmI CTRYAG 2 cut(s) 480, 1962
BfoI RGCGCY 1 cut(s) 1160
BfrI CTTAAG 2 cut(s) 1325, 1346
BfuAI ACCTGC 1 cut(s) 1591
BfuI GTATCC 2 cut(s) 1845, 2229
BglII AGATCT 2 cut(s) 796, 2358
BisI GCNGC 4 cut(s) 536, 1535, 2546, 2889
BlsI GCNGC 4 cut(s) 537, 1536, 2547, 2890
BmcAI AGTACT 2 cut(s) 316, 1973
Bme1390I CCNGG 4 cut(s) 328, 555, 666, 1680
Bme18I GGWCC 5 cut(s) 493, 1081, 1527, 1603, 2908
BmeT110I CYCGRG 3 cut(s) 239, 1476, 1986
BmgBI CACGTC 4 cut(s) 1097, 1381, 1825, 2770
BmgT120I GGNCC 6 cut(s) 493, 1081, 1527, 1603, 2270, 2908
BmiI GGNNCC 8 cut(s) 98, 332, 461, 1354, 1605, 2560, 2604, 2909
BmrFI CCNGG 4 cut(s) 328, 555, 666, 1680
BmsI GCATC 1 cut(s) 1869
BmtI GCTAGC 1 cut(s) 1367
BpiI GAAGAC 1 cut(s) 788
BplI GAGNNNNNCTC 6 cut(s) 1709, 1741, 2159, 2191, 2775, 2807
BpmI CTGGAG 1 cut(s) 1527
BpuEI CTTGAG 1 cut(s) 2613
BpuMI CCSGG 1 cut(s) 1680
Bsa29I ATCGAT 1 cut(s) 258
BsaAI YACGTR 1 cut(s) 1933
BsaI GGTCTC 1 cut(s) 1061
BsaJI CCNNGG 5 cut(s) 177, 276, 664, 1620, 1635
BsaXI ACNNNNNCTCC 4 cut(s) 624, 654, 1194, 1224
Bsc4I CCNNNNNNNGG 2 cut(s) 1090, 1600
Bse118I RCCGGY 2 cut(s) 80, 2272
Bse1I ACTGG 3 cut(s) 154, 962, 1510
Bse21I CCTNAGG 1 cut(s) 2685
Bse3DI GCAATG 1 cut(s) 2505
BseBI CCWGG 3 cut(s) 328, 555, 666
BseCI ATCGAT 1 cut(s) 258
BseDI CCNNGG 5 cut(s) 177, 276, 664, 1620, 1635
BseGI GGATG 2 cut(s) 2516, 2652
BseLI CCNNNNNNNGG 2 cut(s) 1090, 1600
BseMI GCAATG 1 cut(s) 2505
BseMII CTCAG 7 cut(s) 220, 588, 813, 1870, 2190, 2504, 2699
BseNI ACTGG 3 cut(s) 154, 962, 1510
BseRI GAGGAG 3 cut(s) 20, 194, 2204
BseSI GKGCMC 1 cut(s) 1678
BseXI GCAGC 4 cut(s) 547, 1521, 2557, 2900
BsgI GTGCAG 3 cut(s) 554, 1484, 2225
Bsh1236I CGCG 1 cut(s) 1872
Bsh1285I CGRYCG 1 cut(s) 2352
BshFI GGCC 6 cut(s) 84, 983, 1821, 2141, 2272, 2452
BshNI GGYRCC 3 cut(s) 96, 459, 2558
BshVI ATCGAT 1 cut(s) 258
BsiEI CGRYCG 1 cut(s) 2352
BsiHKAI GWGCWC 3 cut(s) 1308, 1678, 2332
BsiHKCI CYCGRG 3 cut(s) 239, 1476, 1986
BsiSI CCGG 4 cut(s) 81, 1680, 2273, 2611
BslFI GGGAC 3 cut(s) 256, 1107, 1589
BslI CCNNNNNNNGG 2 cut(s) 1090, 1600
BsmAI GTCTC 4 cut(s) 175, 1061, 1952, 2631
BsmBI CGTCTC 2 cut(s) 175, 2631
BsmFI GGGAC 3 cut(s) 256, 1107, 1589
BsnI GGCC 6 cut(s) 84, 983, 1821, 2141, 2272, 2452
Bso31I GGTCTC 1 cut(s) 1061
BsoBI CYCGRG 3 cut(s) 239, 1476, 1986
Bsp1286I GDGCHC 3 cut(s) 1308, 1678, 2332
Bsp1407I TGTACA 1 cut(s) 1704
Bsp19I CCATGG 1 cut(s) 1620
BspACI CCGC 6 cut(s) 375, 518, 1659, 2282, 2378, 2510
BspANI GGCC 6 cut(s) 84, 983, 1821, 2141, 2272, 2452
BspCNI CTCAG 7 cut(s) 219, 589, 814, 1869, 2189, 2503, 2698
BspDI ATCGAT 1 cut(s) 258
BspFNI CGCG 1 cut(s) 1872
BspHI TCATGA 1 cut(s) 1000
BspLI GGNNCC 8 cut(s) 98, 332, 461, 1354, 1605, 2560, 2604, 2909
BspMAI CTGCAG 1 cut(s) 1966
BspMI ACCTGC 1 cut(s) 1591
BspOI GCTAGC 1 cut(s) 1367
BspPI GGATC 7 cut(s) 1347, 1360, 1669, 2577, 2597, 2610, 2796
BspQI GCTCTTC 1 cut(s) 2862
BspT107I GGYRCC 3 cut(s) 96, 459, 2558
BspTI CTTAAG 2 cut(s) 1325, 1346
BspTNI GGTCTC 1 cut(s) 1061
BsrDI GCAATG 1 cut(s) 2505
BsrFI RCCGGY 2 cut(s) 80, 2272
BsrGI TGTACA 1 cut(s) 1704
BsrI ACTGG 3 cut(s) 154, 962, 1510
BssAI RCCGGY 2 cut(s) 80, 2272
BssECI CCNNGG 5 cut(s) 177, 276, 664, 1620, 1635
BssNAI GTATAC 1 cut(s) 2209
BssT1I CCWWGG 2 cut(s) 276, 1620
Bst1107I GTATAC 1 cut(s) 2209
Bst2UI CCWGG 3 cut(s) 328, 555, 666
Bst6I CTCTTC 6 cut(s) 38, 843, 1403, 1770, 2798, 2862
BstAFI CTTAAG 2 cut(s) 1325, 1346
BstAPI GCANNNNNTGC 2 cut(s) 1759, 2885
BstAUI TGTACA 1 cut(s) 1704
BstBAI YACGTR 1 cut(s) 1933
BstC8I GCNNGC 6 cut(s) 82, 126, 855, 1365, 1369, 2808
BstDSI CCRYGG 1 cut(s) 1620
BstF5I GGATG 2 cut(s) 2516, 2652
BstFNI CGCG 1 cut(s) 1872
BstH2I RGCGCY 1 cut(s) 1160
BstHHI GCGC 1 cut(s) 1159
BstMAI GTCTC 4 cut(s) 175, 1061, 1952, 2631
BstMCI CGRYCG 1 cut(s) 2352
BstMWI GCNNNNNNNGC 4 cut(s) 476, 1330, 1759, 2885
BstNI CCWGG 3 cut(s) 328, 555, 666
BstNSI RCATGY 3 cut(s) 128, 236, 1337
BstSCI CCNGG 4 cut(s) 326, 553, 664, 1678
BstSFI CTRYAG 2 cut(s) 480, 1962
BstSLI GKGCMC 1 cut(s) 1678
BstUI CGCG 1 cut(s) 1872
BstV1I GCAGC 4 cut(s) 547, 1521, 2557, 2900
BstV2I GAAGAC 1 cut(s) 788
BstX2I RGATCY 5 cut(s) 796, 1352, 2358, 2602, 2788
BstXI CCANNNNNNTGG 1 cut(s) 1078
BstYI RGATCY 5 cut(s) 796, 1352, 2358, 2602, 2788
BstZ17I GTATAC 1 cut(s) 2209
Bsu15I ATCGAT 1 cut(s) 258
Bsu36I CCTNAGG 1 cut(s) 2685
BsuI GTATCC 2 cut(s) 1845, 2229
BsuRI GGCC 6 cut(s) 84, 983, 1821, 2141, 2272, 2452
BsuTUI ATCGAT 1 cut(s) 258
BtgI CCRYGG 1 cut(s) 1620
BtrI CACGTC 4 cut(s) 1097, 1381, 1825, 2770
BtsCI GGATG 2 cut(s) 2516, 2652
BtsIMutI CAGTG 7 cut(s) 87, 392, 1245, 1296, 1503, 1896, 2661
BveI ACCTGC 1 cut(s) 1591
Cac8I GCNNGC 6 cut(s) 82, 126, 855, 1365, 1369, 2808
CaiI CAGNNNCTG 1 cut(s) 1244
CciI TCATGA 1 cut(s) 1000
CfoI GCGC 1 cut(s) 1159
Cfr10I RCCGGY 2 cut(s) 80, 2272
Cfr13I GGNCC 6 cut(s) 493, 1081, 1527, 1603, 2270, 2908
ClaI ATCGAT 1 cut(s) 258
CseI GACGC 1 cut(s) 260
CspCI CAANNNNNGTGG 2 cut(s) 335, 370
DraIII CACNNNGTG 1 cut(s) 1682
EaeI YGGCCR 2 cut(s) 1819, 2139
Eam1104I CTCTTC 6 cut(s) 38, 843, 1403, 1770, 2798, 2862
EarI CTCTTC 6 cut(s) 38, 843, 1403, 1770, 2798, 2862
EciI GGCGGA 1 cut(s) 2393
Ecl136II GAGCTC 1 cut(s) 2330
Eco130I CCWWGG 2 cut(s) 276, 1620
Eco147I AGGCCT 1 cut(s) 983
Eco24I GRGCYC 1 cut(s) 2332
Eco31I GGTCTC 1 cut(s) 1061
Eco47I GGWCC 5 cut(s) 493, 1081, 1527, 1603, 2908
Eco53kI GAGCTC 1 cut(s) 2330
Eco57I CTGAAG 4 cut(s) 975, 1221, 1361, 1830
Eco81I CCTNAGG 1 cut(s) 2685
Eco88I CYCGRG 3 cut(s) 239, 1476, 1986
EcoICRI GAGCTC 1 cut(s) 2330
EcoO109I RGGNCCY 3 cut(s) 493, 1603, 2908
EcoRII CCWGG 3 cut(s) 326, 553, 664
EcoT14I CCWWGG 2 cut(s) 276, 1620
EcoT38I GRGCYC 1 cut(s) 2332
ErhI CCWWGG 2 cut(s) 276, 1620
Esp3I CGTCTC 2 cut(s) 175, 2631
FalI AAGNNNNNCTT 2 cut(s) 1340, 1372
FaqI GGGAC 3 cut(s) 256, 1107, 1589
FbaI TGATCA 3 cut(s) 973, 2365, 2865
FblI GTMKAC 2 cut(s) 921, 2208
Fnu4HI GCNGC 4 cut(s) 536, 1535, 2546, 2889
FokI GGATG 2 cut(s) 2503, 2639
FriOI GRGCYC 1 cut(s) 2332
Fsp4HI GCNGC 4 cut(s) 536, 1535, 2546, 2889
FspBI CTAG 3 cut(s) 1364, 2448, 2753
GlaI GCGC 1 cut(s) 1158
GluI GCNGC 4 cut(s) 536, 1535, 2546, 2889
GsuI CTGGAG 1 cut(s) 1527
HaeII RGCGCY 1 cut(s) 1160
HaeIII GGCC 6 cut(s) 84, 983, 1821, 2141, 2272, 2452
HapII CCGG 4 cut(s) 81, 1680, 2273, 2611
HgaI GACGC 1 cut(s) 260
HhaI GCGC 1 cut(s) 1159
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HincII GTYRAC 3 cut(s) 424, 2086, 2760
HindII GTYRAC 3 cut(s) 424, 2086, 2760
HindIII AAGCTT 1 cut(s) 1343
HpaII CCGG 4 cut(s) 81, 1680, 2273, 2611
Hpy99I CGWCG 3 cut(s) 896, 1258, 2843
HpyCH4IV ACGT 8 cut(s) 891, 1096, 1380, 1570, 1792, 1824, 1932, 2769
HpyF10VI GCNNNNNNNGC 4 cut(s) 476, 1330, 1759, 2885
HpySE526I ACGT 8 cut(s) 891, 1096, 1380, 1570, 1792, 1824, 1932, 2769
HspAI GCGC 1 cut(s) 1157
KpnI GGTACC 2 cut(s) 463, 2562
KroI GCCGGC 1 cut(s) 80
KroNI GCCGGC 1 cut(s) 82
Ksp22I TGATCA 3 cut(s) 973, 2365, 2865
LguI GCTCTTC 1 cut(s) 2862
LmnI GCTCC 7 cut(s) 556, 1008, 1202, 1215, 1303, 2746, 2815
Lsp1109I GCAGC 4 cut(s) 547, 1521, 2557, 2900
LweI GCATC 1 cut(s) 1869
MaeI CTAG 3 cut(s) 1364, 2448, 2753
MaeII ACGT 8 cut(s) 891, 1096, 1380, 1570, 1792, 1824, 1932, 2769
MflI RGATCY 5 cut(s) 796, 1352, 2358, 2602, 2788
MhlI GDGCHC 3 cut(s) 1308, 1678, 2332
MlsI TGGCCA 2 cut(s) 1821, 2141
MluCI AATT 9 cut(s) 48, 412, 567, 735, 1389, 1427, 1457, 1770, 2296
MluNI TGGCCA 2 cut(s) 1821, 2141
MlyI GAGTC 5 cut(s) 917, 1772, 2201, 2765, 2822
MmeI TCCRAC 2 cut(s) 891, 1219
Mox20I TGGCCA 2 cut(s) 1821, 2141
MroNI GCCGGC 1 cut(s) 80
MscI TGGCCA 2 cut(s) 1821, 2141
MseI TTAA 6 cut(s) 320, 1038, 1326, 1347, 1460, 2619
MslI CAYNNNNRTG 2 cut(s) 1076, 2510
Msp20I TGGCCA 2 cut(s) 1821, 2141
MspA1I CMGCKG 1 cut(s) 518
MspCI CTTAAG 2 cut(s) 1325, 1346
MspI CCGG 4 cut(s) 81, 1680, 2273, 2611
MspR9I CCNGG 4 cut(s) 328, 555, 666, 1680
MvaI CCWGG 3 cut(s) 328, 555, 666
MvnI CGCG 1 cut(s) 1872
MwoI GCNNNNNNNGC 4 cut(s) 476, 1330, 1759, 2885
NaeI GCCGGC 1 cut(s) 82
NciI CCSGG 1 cut(s) 1680
NcoI CCATGG 1 cut(s) 1620
NgoMIV GCCGGC 1 cut(s) 80
NheI GCTAGC 1 cut(s) 1363
NlaIV GGNNCC 8 cut(s) 98, 332, 461, 1354, 1605, 2560, 2604, 2909
NmuCI GTSAC 8 cut(s) 390, 896, 1240, 1436, 1739, 2250, 2469, 2512
NspI RCATGY 3 cut(s) 128, 236, 1337
PaeI GCATGC 1 cut(s) 128
PaeR7I CTCGAG 1 cut(s) 1476
PagI TCATGA 1 cut(s) 1000
PceI AGGCCT 1 cut(s) 983
PciI ACATGT 1 cut(s) 232
PciSI GCTCTTC 1 cut(s) 2862
PcsI WCGNNNNNNNCGW 2 cut(s) 174, 1623
PdiI GCCGGC 1 cut(s) 82
PfoI TCCNGGA 1 cut(s) 553
PkrI GCNGC 4 cut(s) 537, 1536, 2547, 2890
PleI GAGTC 5 cut(s) 917, 1772, 2200, 2764, 2822
PpsI GAGTC 5 cut(s) 917, 1772, 2200, 2764, 2822
Ppu21I YACGTR 1 cut(s) 1933
PpuMI RGGWCCY 3 cut(s) 493, 1603, 2908
PscI ACATGT 1 cut(s) 232
PshBI ATTAAT 1 cut(s) 1460
Psp124BI GAGCTC 1 cut(s) 2332
Psp1406I AACGTT 1 cut(s) 1792
Psp5II RGGWCCY 3 cut(s) 493, 1603, 2908
Psp6I CCWGG 3 cut(s) 326, 553, 664
PspGI CCWGG 3 cut(s) 326, 553, 664
PspN4I GGNNCC 8 cut(s) 98, 332, 461, 1354, 1605, 2560, 2604, 2909
PspPI GGNCC 6 cut(s) 493, 1081, 1527, 1603, 2270, 2908
PspPPI RGGWCCY 3 cut(s) 493, 1603, 2908
PspXI VCTCGAGB 1 cut(s) 1476
PsrI GAACNNNNNNTAC 2 cut(s) 1779, 1811
PstI CTGCAG 1 cut(s) 1966
PstNI CAGNNNCTG 1 cut(s) 1244
PsuI RGATCY 5 cut(s) 796, 1352, 2358, 2602, 2788
RseI CAYNNNNRTG 2 cut(s) 1076, 2510
SacI GAGCTC 1 cut(s) 2332
SapI GCTCTTC 1 cut(s) 2862
SaqAI TTAA 6 cut(s) 320, 1038, 1326, 1347, 1460, 2619
SatI GCNGC 4 cut(s) 536, 1535, 2546, 2889
Sau96I GGNCC 6 cut(s) 493, 1081, 1527, 1603, 2270, 2908
ScaI AGTACT 2 cut(s) 316, 1973
SchI GAGTC 5 cut(s) 917, 1772, 2201, 2765, 2822
ScrFI CCNGG 4 cut(s) 328, 555, 666, 1680
SduI GDGCHC 3 cut(s) 1308, 1678, 2332
SfaNI GCATC 1 cut(s) 1869
SfcI CTRYAG 2 cut(s) 480, 1962
Sfr274I CTCGAG 1 cut(s) 1476
SinI GGWCC 5 cut(s) 493, 1081, 1527, 1603, 2908
SlaI CTCGAG 1 cut(s) 1476
SmiMI CAYNNNNRTG 2 cut(s) 1076, 2510
SmlI CTYRAG 4 cut(s) 1325, 1346, 1476, 2628
SmoI CTYRAG 4 cut(s) 1325, 1346, 1476, 2628
SphI GCATGC 1 cut(s) 128
Sse9I AATT 9 cut(s) 48, 412, 567, 735, 1389, 1427, 1457, 1770, 2296
SseBI AGGCCT 1 cut(s) 983
SsiI CCGC 6 cut(s) 375, 518, 1659, 2282, 2378, 2510
SspMI CTAG 3 cut(s) 1364, 2448, 2753
SstI GAGCTC 1 cut(s) 2332
StuI AGGCCT 1 cut(s) 983
StyD4I CCNGG 4 cut(s) 326, 553, 664, 1678
StyI CCWWGG 2 cut(s) 276, 1620
TaiI ACGT 8 cut(s) 894, 1099, 1383, 1573, 1795, 1827, 1935, 2772
TaqI TCGA 4 cut(s) 258, 1477, 2326, 2372
TasI AATT 9 cut(s) 48, 412, 567, 735, 1389, 1427, 1457, 1770, 2296
TatI WGTACW 4 cut(s) 314, 1684, 1704, 1971
Tru1I TTAA 6 cut(s) 320, 1038, 1326, 1347, 1460, 2619
Tru9I TTAA 6 cut(s) 320, 1038, 1326, 1347, 1460, 2619
TscAI CASTG 7 cut(s) 94, 399, 1245, 1296, 1510, 1903, 2668
TseFI GTSAC 8 cut(s) 390, 896, 1240, 1436, 1739, 2250, 2469, 2512
TseI GCWGC 4 cut(s) 535, 1534, 2545, 2888
Tsp45I GTSAC 8 cut(s) 390, 896, 1240, 1436, 1739, 2250, 2469, 2512
TspGWI ACGGA 2 cut(s) 2248, 2733
TspRI CASTG 7 cut(s) 94, 399, 1245, 1296, 1510, 1903, 2668
Vha464I CTTAAG 2 cut(s) 1325, 1346
VneI GTGCAC 1 cut(s) 1674
VpaK11BI GGWCC 5 cut(s) 493, 1081, 1527, 1603, 2908
VspI ATTAAT 1 cut(s) 1460
XapI RAATTY 1 cut(s) 412
XceI RCATGY 3 cut(s) 128, 236, 1337
XcmI CCANNNNNNNNNTGG 1 cut(s) 107
XhoI CTCGAG 1 cut(s) 1476
XmiI GTMKAC 2 cut(s) 921, 2208
XspI CTAG 3 cut(s) 1364, 2448, 2753
ZrmI AGTACT 2 cut(s) 316, 1973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.