AT5G15960

Stress-induced protein KIN2-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
5209717 .. 5210826
1110 bp
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UTR
Exon/CDS
Intron
AT5G15960.1

Sequence Viewer

Length: 201 bp
ATGTCAGAGACCAACAAGAATGCCTTCCAAGCCGGTCAGACCGCTGGCAAAGCTGAGGAGAAGAGCAATGTTCTGCTGGACAAGGCCAAGGATGCTGCAGCTGGTGCTGGAGCTGGAGCACAACAGGCGGGAAAGAGTGTATCGGATGCGGCAGCGGGAGGTGTTAACTTCGTGAAGGACAAGACCGGCCTGAACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

6.5

Weight (kDa)

9.1

Isoelectric Point (pI)

21.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 42, 128, 149, 155
AluBI AGCT 3 cut(s) 53, 101, 113
AluI AGCT 3 cut(s) 53, 101, 113
Alw21I GWGCWC 1 cut(s) 121
Alw26I GTCTC 1 cut(s) 2
AoxI GGCC 2 cut(s) 84, 187
ApeKI GCWGC 3 cut(s) 95, 98, 152
Asp700I GAANNNNTTC 1 cut(s) 23
Bbv12I GWGCWC 1 cut(s) 121
BbvCI CCTCAGC 1 cut(s) 54
BbvI GCAGC 3 cut(s) 82, 110, 164
BcoDI GTCTC 1 cut(s) 2
BfmI CTRYAG 1 cut(s) 96
BisI GCNGC 4 cut(s) 96, 99, 150, 153
BlsI GCNGC 4 cut(s) 97, 100, 151, 154
BmsI GCATC 2 cut(s) 82, 136
BpmI CTGGAG 2 cut(s) 129, 135
Bpu10I CCTNAGC 1 cut(s) 54
BsaI GGTCTC 1 cut(s) 2
BsaJI CCNNGG 1 cut(s) 87
Bse118I RCCGGY 2 cut(s) 32, 185
Bse3DI GCAATG 1 cut(s) 73
BseDI CCNNGG 1 cut(s) 87
BseGI GGATG 2 cut(s) 97, 151
BseMI GCAATG 1 cut(s) 73
BseMII CTCAG 1 cut(s) 45
BseRI GAGGAG 1 cut(s) 71
BseXI GCAGC 3 cut(s) 82, 110, 164
BshFI GGCC 2 cut(s) 86, 189
BsiHKAI GWGCWC 1 cut(s) 121
BsiSI CCGG 2 cut(s) 33, 186
BsmAI GTCTC 1 cut(s) 2
BsmI GAATGC 1 cut(s) 25
BsnI GGCC 2 cut(s) 86, 189
Bso31I GGTCTC 1 cut(s) 2
Bsp1286I GDGCHC 1 cut(s) 121
BspACI CCGC 4 cut(s) 42, 128, 149, 155
BspANI GGCC 2 cut(s) 86, 189
BspCNI CTCAG 1 cut(s) 46
BspMAI CTGCAG 1 cut(s) 100
BspQI GCTCTTC 1 cut(s) 56
BspTNI GGTCTC 1 cut(s) 2
BsrDI GCAATG 1 cut(s) 73
BsrFI RCCGGY 2 cut(s) 32, 185
BssAI RCCGGY 2 cut(s) 32, 185
BssECI CCNNGG 1 cut(s) 87
BssT1I CCWWGG 1 cut(s) 87
Bst6I CTCTTC 1 cut(s) 56
BstAPI GCANNNNNTGC 1 cut(s) 104
BstC8I GCNNGC 1 cut(s) 46
BstDEI CTNAG 1 cut(s) 54
BstF5I GGATG 2 cut(s) 97, 151
BstMAI GTCTC 1 cut(s) 2
BstMWI GCNNNNNNNGC 5 cut(s) 29, 50, 92, 104, 125
BstSFI CTRYAG 1 cut(s) 96
BstV1I GCAGC 3 cut(s) 82, 110, 164
BsuRI GGCC 2 cut(s) 86, 189
BtsCI GGATG 2 cut(s) 97, 151
Cac8I GCNNGC 1 cut(s) 46
Cfr10I RCCGGY 2 cut(s) 32, 185
CviJI RGCY 6 cut(s) 32, 53, 86, 101, 113, 189
CviKI_1 RGCY 6 cut(s) 32, 53, 86, 101, 113, 189
DdeI CTNAG 1 cut(s) 54
Eam1104I CTCTTC 1 cut(s) 56
EarI CTCTTC 1 cut(s) 56
Eco130I CCWWGG 1 cut(s) 87
Eco31I GGTCTC 1 cut(s) 2
EcoT14I CCWWGG 1 cut(s) 87
ErhI CCWWGG 1 cut(s) 87
FalI AAGNNNNNCTT 2 cut(s) 8, 40
FauI CCCGC 2 cut(s) 121, 148
Fnu4HI GCNGC 4 cut(s) 96, 99, 150, 153
FokI GGATG 2 cut(s) 104, 158
Fsp4HI GCNGC 4 cut(s) 96, 99, 150, 153
GluI GCNGC 4 cut(s) 96, 99, 150, 153
GsuI CTGGAG 2 cut(s) 129, 135
HaeIII GGCC 2 cut(s) 86, 189
HapII CCGG 2 cut(s) 33, 186
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HpaI GTTAAC 1 cut(s) 166
HpaII CCGG 2 cut(s) 33, 186
Hpy166II GTNNAC 1 cut(s) 166
Hpy188I TCNGA 3 cut(s) 7, 39, 145
Hpy188III TCNNGA 1 cut(s) 172
Hpy8I GTNNAC 1 cut(s) 166
HpyAV CCTTC 2 cut(s) 34, 169
HpyCH4V TGCA 1 cut(s) 98
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 50, 92, 104, 125
HpyF3I CTNAG 1 cut(s) 54
KspAI GTTAAC 1 cut(s) 166
LguI GCTCTTC 1 cut(s) 56
LmnI GCTCC 2 cut(s) 110, 116
LpnPI CCDG 7 cut(s) 30, 46, 62, 87, 93, 99, 110
Lsp1109I GCAGC 3 cut(s) 82, 110, 164
LweI GCATC 2 cut(s) 82, 136
MboII GAAGA 1 cut(s) 73
MhlI GDGCHC 1 cut(s) 121
MnlI CCTC 2 cut(s) 49, 152
MroXI GAANNNNTTC 1 cut(s) 23
MseI TTAA 1 cut(s) 165
MspA1I CMGCKG 3 cut(s) 44, 101, 155
MspI CCGG 2 cut(s) 33, 186
Mva1269I GAATGC 1 cut(s) 25
MwoI GCNNNNNNNGC 5 cut(s) 29, 50, 92, 104, 125
PciSI GCTCTTC 1 cut(s) 56
PctI GAATGC 1 cut(s) 25
PdmI GAANNNNTTC 1 cut(s) 23
PkrI GCNGC 4 cut(s) 97, 100, 151, 154
PstI CTGCAG 1 cut(s) 100
PvuII CAGCTG 1 cut(s) 101
SapI GCTCTTC 1 cut(s) 56
SaqAI TTAA 1 cut(s) 165
SatI GCNGC 4 cut(s) 96, 99, 150, 153
SduI GDGCHC 1 cut(s) 121
SetI ASST 4 cut(s) 55, 103, 115, 163
SfaNI GCATC 2 cut(s) 82, 136
SfcI CTRYAG 1 cut(s) 96
SsiI CCGC 4 cut(s) 42, 128, 149, 155
StyI CCWWGG 1 cut(s) 87
TauI GCSGC 1 cut(s) 152
Tru1I TTAA 1 cut(s) 165
Tru9I TTAA 1 cut(s) 165
TseI GCWGC 3 cut(s) 95, 98, 152
XmnI GAANNNNTTC 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.