Rw2G047410

Stress-induced protein KIN2-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
74712959 .. 74713455
497 bp
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UTR
Exon/CDS
Intron
Rw2G047410.1

Sequence Viewer

Length: 201 bp
ATGGACAACTCCCAAAGAGCTTCTCATCAAGCTGGCCAGGCCAAGGGCCAAGCTCAGGAAAAGGCCAGCAACATGATGGACTCGGCCAGCAATGCTGCCCAATCTGCCAAGGAATCAGCTCAAAATGCTGGTCAGCAAATGCAGCAAAAGGCACAGGGAGCTGCTGAATCAGTCAGGGATGCAATGGGAGGCAACAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

6.81

Weight (kDa)

8.16

Isoelectric Point (pI)

36.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 2 cut(s) 34, 84
AfiI CCNNNNNNNGG 2 cut(s) 43, 55
AjnI CCWGG 1 cut(s) 36
AluBI AGCT 5 cut(s) 20, 32, 53, 119, 161
AluI AGCT 5 cut(s) 20, 32, 53, 119, 161
AoxI GGCC 5 cut(s) 34, 39, 46, 63, 84
ApeKI GCWGC 3 cut(s) 95, 142, 161
ArsI GACNNNNNNTTYG 2 cut(s) 115, 147
AspS9I GGNCC 1 cut(s) 46
BalI TGGCCA 1 cut(s) 36
BbvI GCAGC 3 cut(s) 82, 148, 154
BccI CCATC 1 cut(s) 70
BciT130I CCWGG 1 cut(s) 38
BisI GCNGC 3 cut(s) 96, 143, 162
BlsI GCNGC 3 cut(s) 97, 144, 163
Bme1390I CCNGG 1 cut(s) 38
BmgT120I GGNCC 1 cut(s) 46
BmrFI CCNGG 1 cut(s) 38
BmsI GCATC 1 cut(s) 169
Bpu10I CCTNAGC 1 cut(s) 54
BsaJI CCNNGG 2 cut(s) 42, 108
Bsc4I CCNNNNNNNGG 2 cut(s) 43, 55
Bse3DI GCAATG 2 cut(s) 97, 189
BseBI CCWGG 1 cut(s) 38
BseDI CCNNGG 2 cut(s) 42, 108
BseGI GGATG 1 cut(s) 184
BseLI CCNNNNNNNGG 2 cut(s) 43, 55
BseMI GCAATG 2 cut(s) 97, 189
BseMII CTCAG 1 cut(s) 68
BseXI GCAGC 3 cut(s) 82, 148, 154
BshFI GGCC 5 cut(s) 36, 41, 48, 65, 86
BslI CCNNNNNNNGG 2 cut(s) 43, 55
BsnI GGCC 5 cut(s) 36, 41, 48, 65, 86
BspANI GGCC 5 cut(s) 36, 41, 48, 65, 86
BspCNI CTCAG 1 cut(s) 67
BsrDI GCAATG 2 cut(s) 97, 189
BssECI CCNNGG 2 cut(s) 42, 108
BssT1I CCWWGG 2 cut(s) 42, 108
Bst2UI CCWGG 1 cut(s) 38
BstC8I GCNNGC 3 cut(s) 34, 67, 88
BstDEI CTNAG 1 cut(s) 54
BstF5I GGATG 1 cut(s) 184
BstMWI GCNNNNNNNGC 6 cut(s) 38, 92, 104, 125, 142, 158
BstNI CCWGG 1 cut(s) 38
BstSCI CCNGG 1 cut(s) 36
BstV1I GCAGC 3 cut(s) 82, 148, 154
BsuRI GGCC 5 cut(s) 36, 41, 48, 65, 86
BtsCI GGATG 1 cut(s) 184
Cac8I GCNNGC 3 cut(s) 34, 67, 88
Cfr13I GGNCC 1 cut(s) 46
CviAII CATG 1 cut(s) 73
DdeI CTNAG 1 cut(s) 54
EaeI YGGCCR 2 cut(s) 34, 84
Eco130I CCWWGG 2 cut(s) 42, 108
EcoRII CCWGG 1 cut(s) 36
EcoT14I CCWWGG 2 cut(s) 42, 108
ErhI CCWWGG 2 cut(s) 42, 108
FaeI CATG 1 cut(s) 76
FaiI YATR 1 cut(s) 74
FatI CATG 1 cut(s) 72
Fnu4HI GCNGC 3 cut(s) 96, 143, 162
FokI GGATG 1 cut(s) 191
Fsp4HI GCNGC 3 cut(s) 96, 143, 162
GluI GCNGC 3 cut(s) 96, 143, 162
HaeIII GGCC 5 cut(s) 36, 41, 48, 65, 86
Hin1II CATG 1 cut(s) 76
HinfI GANTC 3 cut(s) 80, 113, 167
Hpy188III TCNNGA 1 cut(s) 56
HpyCH4V TGCA 2 cut(s) 142, 182
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 92, 104, 125, 142, 158
HpyF3I CTNAG 1 cut(s) 54
Hsp92II CATG 1 cut(s) 76
LmnI GCTCC 1 cut(s) 158
LpnPI CCDG 9 cut(s) 18, 23, 41, 50, 79, 100, 114, 140, 160
Lsp1109I GCAGC 3 cut(s) 82, 148, 154
LweI GCATC 1 cut(s) 169
MlsI TGGCCA 1 cut(s) 36
MluNI TGGCCA 1 cut(s) 36
MlyI GAGTC 1 cut(s) 74
MnlI CCTC 1 cut(s) 182
Mox20I TGGCCA 1 cut(s) 36
MscI TGGCCA 1 cut(s) 36
Msp20I TGGCCA 1 cut(s) 36
MspR9I CCNGG 1 cut(s) 38
MvaI CCWGG 1 cut(s) 38
MwoI GCNNNNNNNGC 6 cut(s) 38, 92, 104, 125, 142, 158
NlaIII CATG 1 cut(s) 76
NmeAIII GCCGAG 1 cut(s) 62
PfeI GAWTC 2 cut(s) 113, 167
PkrI GCNGC 3 cut(s) 97, 144, 163
PleI GAGTC 1 cut(s) 74
PpsI GAGTC 1 cut(s) 74
Psp6I CCWGG 1 cut(s) 36
PspGI CCWGG 1 cut(s) 36
PspPI GGNCC 1 cut(s) 46
SatI GCNGC 3 cut(s) 96, 143, 162
Sau96I GGNCC 1 cut(s) 46
SchI GAGTC 1 cut(s) 74
ScrFI CCNGG 1 cut(s) 38
SetI ASST 5 cut(s) 22, 34, 55, 121, 163
SfaNI GCATC 1 cut(s) 169
StyD4I CCNGG 1 cut(s) 36
StyI CCWWGG 2 cut(s) 42, 108
TfiI GAWTC 2 cut(s) 113, 167
TseI GCWGC 3 cut(s) 95, 142, 161
XcmI CCANNNNNNNNNTGG 1 cut(s) 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.