Prupe.3G243400_v2.0.a1

Stress-induced protein KIN2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0009815
Physical Location & Seq
Reverse (-)
23612995 .. 23613708
714 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G243400.1

Sequence Viewer

Length: 204 bp
ATGAATCAATCCCAGAATATCAGCCACCAAGCCGGCCAGGCCAAGGGCCAGGCTGAGGAGAAGGCTAGTGGCATGATGGACCAGATGAGCAATGCTGCCCAATCTGCCAAGGAATCATGCCAAGGGGCTGGTCAGCAGATGAAGGACAAGGCACAGGGAGCAGCTGATTCTGTCAAGGATGCAGTTGGAGCCAACAAAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

68

Amino Acids

6.88

Weight (kDa)

6.53

Isoelectric Point (pI)

48.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 34
AfiI CCNNNNNNNGG 2 cut(s) 43, 55
AjnI CCWGG 2 cut(s) 36, 48
AluBI AGCT 1 cut(s) 164
AluI AGCT 1 cut(s) 164
AoxI GGCC 3 cut(s) 34, 39, 46
ApeKI GCWGC 2 cut(s) 95, 161
AspS9I GGNCC 2 cut(s) 46, 79
AvaII GGWCC 1 cut(s) 79
BbvCI CCTCAGC 1 cut(s) 54
BbvI GCAGC 2 cut(s) 82, 173
BccI CCATC 1 cut(s) 70
BciT130I CCWGG 2 cut(s) 38, 50
BfaI CTAG 1 cut(s) 66
BglI GCCNNNNNGGC 1 cut(s) 38
BisI GCNGC 2 cut(s) 96, 162
BlsI GCNGC 2 cut(s) 97, 163
Bme1390I CCNGG 2 cut(s) 38, 50
Bme18I GGWCC 1 cut(s) 79
BmgT120I GGNCC 2 cut(s) 46, 79
BmiI GGNNCC 1 cut(s) 190
BmrFI CCNGG 2 cut(s) 38, 50
BmsI GCATC 1 cut(s) 169
Bpu10I CCTNAGC 1 cut(s) 54
BsaJI CCNNGG 3 cut(s) 42, 108, 121
Bsc4I CCNNNNNNNGG 2 cut(s) 43, 55
Bse118I RCCGGY 1 cut(s) 32
Bse3DI GCAATG 1 cut(s) 97
BseBI CCWGG 2 cut(s) 38, 50
BseDI CCNNGG 3 cut(s) 42, 108, 121
BseGI GGATG 1 cut(s) 184
BseLI CCNNNNNNNGG 2 cut(s) 43, 55
BseMI GCAATG 1 cut(s) 97
BseMII CTCAG 1 cut(s) 45
BseRI GAGGAG 1 cut(s) 71
BseXI GCAGC 2 cut(s) 82, 173
BshFI GGCC 3 cut(s) 36, 41, 48
BsiSI CCGG 1 cut(s) 33
BslI CCNNNNNNNGG 2 cut(s) 43, 55
BsnI GGCC 3 cut(s) 36, 41, 48
BspANI GGCC 3 cut(s) 36, 41, 48
BspCNI CTCAG 1 cut(s) 46
BspLI GGNNCC 1 cut(s) 190
BsrDI GCAATG 1 cut(s) 97
BsrFI RCCGGY 1 cut(s) 32
BssAI RCCGGY 1 cut(s) 32
BssECI CCNNGG 3 cut(s) 42, 108, 121
BssT1I CCWWGG 3 cut(s) 42, 108, 121
Bst2UI CCWGG 2 cut(s) 38, 50
BstC8I GCNNGC 1 cut(s) 34
BstDEI CTNAG 1 cut(s) 54
BstF5I GGATG 1 cut(s) 184
BstMWI GCNNNNNNNGC 4 cut(s) 38, 104, 158, 188
BstNI CCWGG 2 cut(s) 38, 50
BstSCI CCNGG 2 cut(s) 36, 48
BstV1I GCAGC 2 cut(s) 82, 173
BstXI CCANNNNNNTGG 1 cut(s) 128
BsuRI GGCC 3 cut(s) 36, 41, 48
BtsCI GGATG 1 cut(s) 184
Cac8I GCNNGC 1 cut(s) 34
Cfr10I RCCGGY 1 cut(s) 32
Cfr13I GGNCC 2 cut(s) 46, 79
CviAII CATG 2 cut(s) 73, 117
DdeI CTNAG 1 cut(s) 54
EaeI YGGCCR 1 cut(s) 34
Eco130I CCWWGG 3 cut(s) 42, 108, 121
Eco47I GGWCC 1 cut(s) 79
EcoRII CCWGG 2 cut(s) 36, 48
EcoT14I CCWWGG 3 cut(s) 42, 108, 121
ErhI CCWWGG 3 cut(s) 42, 108, 121
FaeI CATG 2 cut(s) 76, 120
FaiI YATR 2 cut(s) 74, 118
FatI CATG 2 cut(s) 72, 116
Fnu4HI GCNGC 2 cut(s) 96, 162
FokI GGATG 1 cut(s) 191
Fsp4HI GCNGC 2 cut(s) 96, 162
FspBI CTAG 1 cut(s) 66
GluI GCNGC 2 cut(s) 96, 162
HaeIII GGCC 3 cut(s) 36, 41, 48
HapII CCGG 1 cut(s) 33
Hin1II CATG 2 cut(s) 76, 120
HinfI GANTC 3 cut(s) 4, 113, 167
HpaII CCGG 1 cut(s) 33
HpyAV CCTTC 2 cut(s) 55, 136
HpyCH4V TGCA 1 cut(s) 182
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 104, 158, 188
HpyF3I CTNAG 1 cut(s) 54
Hsp92II CATG 2 cut(s) 76, 120
KroI GCCGGC 1 cut(s) 32
KroNI GCCGGC 1 cut(s) 34
LmnI GCTCC 2 cut(s) 158, 188
LpnPI CCDG 9 cut(s) 23, 26, 35, 46, 50, 62, 95, 114, 140
Lsp1109I GCAGC 2 cut(s) 82, 173
LweI GCATC 1 cut(s) 169
MaeI CTAG 1 cut(s) 66
MluCI AATT 1 cut(s) 199
MmeI TCCRAC 1 cut(s) 166
MnlI CCTC 1 cut(s) 49
MroNI GCCGGC 1 cut(s) 32
MseI TTAA 1 cut(s) 202
MspA1I CMGCKG 1 cut(s) 164
MspI CCGG 1 cut(s) 33
MspR9I CCNGG 2 cut(s) 38, 50
MvaI CCWGG 2 cut(s) 38, 50
MwoI GCNNNNNNNGC 4 cut(s) 38, 104, 158, 188
NaeI GCCGGC 1 cut(s) 34
NgoMIV GCCGGC 1 cut(s) 32
NlaIII CATG 2 cut(s) 76, 120
NlaIV GGNNCC 1 cut(s) 190
PdiI GCCGGC 1 cut(s) 34
PfeI GAWTC 3 cut(s) 4, 113, 167
PkrI GCNGC 2 cut(s) 97, 163
Psp6I CCWGG 2 cut(s) 36, 48
PspGI CCWGG 2 cut(s) 36, 48
PspN4I GGNNCC 1 cut(s) 190
PspPI GGNCC 2 cut(s) 46, 79
PvuII CAGCTG 1 cut(s) 164
SaqAI TTAA 1 cut(s) 202
SatI GCNGC 2 cut(s) 96, 162
Sau96I GGNCC 2 cut(s) 46, 79
ScrFI CCNGG 2 cut(s) 38, 50
SetI ASST 1 cut(s) 166
SfaNI GCATC 1 cut(s) 169
SinI GGWCC 1 cut(s) 79
Sse9I AATT 1 cut(s) 199
SspMI CTAG 1 cut(s) 66
StyD4I CCNGG 2 cut(s) 36, 48
StyI CCWWGG 3 cut(s) 42, 108, 121
TasI AATT 1 cut(s) 199
TfiI GAWTC 3 cut(s) 4, 113, 167
Tru1I TTAA 1 cut(s) 202
Tru9I TTAA 1 cut(s) 202
TseI GCWGC 2 cut(s) 95, 161
TspDTI ATGAA 2 cut(s) 17, 155
VpaK11BI GGWCC 1 cut(s) 79
XspI CTAG 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.