ATPase family AAA domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03060 AT5G16930 |
| fragaria_vesca | FvH4_7g33981 FvH4_7g33981 FvH4_7g33981 |
| malus_domestica | MD01G1236100.v1.1 MD07G1308800.v1.1 |
| prunus_persica | Prupe.2G326200_v2.0.a1 |
| pyrus_communis | pycom01g24410 pycom07g28090 |
| rosa_chinensis | RchiOBHm_Chr1g0384221 |
| rosa_laevigata | RLG00000026058 |
| rosa_multiflora | Rmu_sc0005139.1_g000003 Rmu_sc0014578.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00276840 |
| rosa_rugosa | Rorug01G0445900 |
| rosa_samantha | Rh1AG471400 Rh1BG429200 Rh1CG441800 Rh1DG461900 |
| rosa_wichuraiana | Rw1G040110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1907 |
| AccB1I | GGYRCC | 1 cut(s) | 941 |
| AccBSI | CCGCTC | 2 cut(s) | 908, 1417 |
| AccI | GTMKAC | 1 cut(s) | 1079 |
| AccII | CGCG | 2 cut(s) | 59, 1781 |
| AccIII | TCCGGA | 1 cut(s) | 262 |
| AciI | CCGC | 9 cut(s) | 48, 155, 378, 499, 604, 906, 1060, 1417, 1746 |
| AclWI | GGATC | 4 cut(s) | 254, 308, 929, 1734 |
| AcsI | RAATTY | 2 cut(s) | 68, 1574 |
| AcuI | CTGAAG | 3 cut(s) | 231, 438, 741 |
| AcyI | GRCGYC | 1 cut(s) | 161 |
| AfaI | GTAC | 4 cut(s) | 856, 1019, 1477, 1634 |
| AfeI | AGCGCT | 2 cut(s) | 1509, 1601 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 297, 1028, 1059, 1226, 1252, 1586 |
| AgsI | TTSAA | 9 cut(s) | 295, 335, 641, 683, 1133, 1574, 1606, 1684, 1802 |
| AjnI | CCWGG | 3 cut(s) | 1219, 1525, 1585 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1006, 1038 |
| Alw21I | GWGCWC | 3 cut(s) | 733, 1318, 1456 |
| Alw26I | GTCTC | 4 cut(s) | 350, 643, 683, 1559 |
| Alw44I | GTGCAC | 1 cut(s) | 1452 |
| AlwI | GGATC | 4 cut(s) | 254, 308, 929, 1734 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 719, 1550 |
| Ama87I | CYCGRG | 2 cut(s) | 348, 1245 |
| Aor13HI | TCCGGA | 1 cut(s) | 262 |
| Aor51HI | AGCGCT | 2 cut(s) | 1509, 1601 |
| AoxI | GGCC | 2 cut(s) | 288, 495 |
| ApaLI | GTGCAC | 1 cut(s) | 1452 |
| ApeKI | GCWGC | 9 cut(s) | 41, 74, 77, 139, 914, 1241, 1693, 1742, 1805 |
| ApoI | RAATTY | 2 cut(s) | 68, 1574 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1252, 1284, 1485, 1517 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 244, 636 |
| AspLEI | GCGC | 6 cut(s) | 61, 388, 1122, 1510, 1602, 1823 |
| AspS9I | GGNCC | 4 cut(s) | 86, 496, 1214, 1353 |
| AsuC2I | CCSGG | 1 cut(s) | 1662 |
| AsuHPI | GGTGA | 4 cut(s) | 448, 1118, 1493, 1541 |
| AsuNHI | GCTAGC | 1 cut(s) | 1150 |
| AvaI | CYCGRG | 2 cut(s) | 348, 1245 |
| AvaII | GGWCC | 3 cut(s) | 86, 1214, 1353 |
| BaeGI | GKGCMC | 1 cut(s) | 1456 |
| BanI | GGYRCC | 1 cut(s) | 941 |
| BanII | GRGCYC | 2 cut(s) | 733, 1318 |
| BauI | CACGAG | 2 cut(s) | 732, 1041 |
| BbsI | GAAGAC | 1 cut(s) | 1238 |
| Bbv12I | GWGCWC | 3 cut(s) | 733, 1318, 1456 |
| BbvCI | CCTCAGC | 1 cut(s) | 135 |
| BbvI | GCAGC | 9 cut(s) | 28, 61, 64, 151, 926, 1228, 1705, 1729, 1792 |
| BccI | CCATC | 4 cut(s) | 77, 487, 824, 1783 |
| BceAI | ACGGC | 1 cut(s) | 46 |
| BciT130I | CCWGG | 3 cut(s) | 1221, 1527, 1587 |
| BcnI | CCSGG | 1 cut(s) | 1662 |
| BcoDI | GTCTC | 4 cut(s) | 350, 643, 683, 1559 |
| BfaI | CTAG | 7 cut(s) | 38, 1151, 1271, 1505, 1535, 1625, 1901 |
| BfmI | CTRYAG | 1 cut(s) | 78 |
| BfoI | RGCGCY | 2 cut(s) | 1511, 1603 |
| BfuAI | ACCTGC | 1 cut(s) | 1907 |
| BglII | AGATCT | 1 cut(s) | 1262 |
| BlpI | GCTNAGC | 1 cut(s) | 465 |
| Bme1390I | CCNGG | 4 cut(s) | 1221, 1527, 1587, 1662 |
| Bme18I | GGWCC | 3 cut(s) | 86, 1214, 1353 |
| BmeT110I | CYCGRG | 2 cut(s) | 348, 1245 |
| BmgT120I | GGNCC | 4 cut(s) | 86, 496, 1214, 1353 |
| BmiI | GGNNCC | 2 cut(s) | 943, 1909 |
| BmrFI | CCNGG | 4 cut(s) | 1221, 1527, 1587, 1662 |
| BmsI | GCATC | 5 cut(s) | 196, 519, 1390, 1891, 1903 |
| BmtI | GCTAGC | 1 cut(s) | 1154 |
| BpiI | GAAGAC | 1 cut(s) | 1238 |
| BpmI | CTGGAG | 2 cut(s) | 976, 1608 |
| Bpu10I | CCTNAGC | 3 cut(s) | 135, 381, 1317 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 465 |
| BpuMI | CCSGG | 1 cut(s) | 1662 |
| Bsa29I | ATCGAT | 2 cut(s) | 1389, 1560 |
| BsaAI | YACGTR | 1 cut(s) | 964 |
| BsaHI | GRCGYC | 1 cut(s) | 161 |
| BsaJI | CCNNGG | 3 cut(s) | 215, 945, 1022 |
| BsaWI | WCCGGW | 1 cut(s) | 262 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 718, 748 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 297, 1028, 1059, 1226, 1252, 1586 |
| Bse118I | RCCGGY | 1 cut(s) | 157 |
| Bse1I | ACTGG | 3 cut(s) | 1096, 1355, 1486 |
| Bse3DI | GCAATG | 1 cut(s) | 1055 |
| BseAI | TCCGGA | 1 cut(s) | 262 |
| BseBI | CCWGG | 3 cut(s) | 1221, 1527, 1587 |
| BseCI | ATCGAT | 2 cut(s) | 1389, 1560 |
| BseDI | CCNNGG | 3 cut(s) | 215, 945, 1022 |
| BseGI | GGATG | 2 cut(s) | 534, 760 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 297, 1028, 1059, 1226, 1252, 1586 |
| BseMI | GCAATG | 1 cut(s) | 1055 |
| BseNI | ACTGG | 3 cut(s) | 1096, 1355, 1486 |
| BseRI | GAGGAG | 4 cut(s) | 201, 204, 294, 1457 |
| BseSI | GKGCMC | 1 cut(s) | 1456 |
| BseXI | GCAGC | 9 cut(s) | 28, 61, 64, 151, 926, 1228, 1705, 1729, 1792 |
| BseYI | CCCAGC | 2 cut(s) | 251, 917 |
| Bsh1236I | CGCG | 2 cut(s) | 59, 1781 |
| BshFI | GGCC | 2 cut(s) | 290, 497 |
| BshNI | GGYRCC | 1 cut(s) | 941 |
| BshVI | ATCGAT | 2 cut(s) | 1389, 1560 |
| BsiHKAI | GWGCWC | 3 cut(s) | 733, 1318, 1456 |
| BsiHKCI | CYCGRG | 2 cut(s) | 348, 1245 |
| BsiSI | CCGG | 3 cut(s) | 158, 263, 1661 |
| BsiWI | CGTACG | 1 cut(s) | 1475 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 297, 1028, 1059, 1226, 1252, 1586 |
| BsmAI | GTCTC | 4 cut(s) | 350, 643, 683, 1559 |
| BsmBI | CGTCTC | 2 cut(s) | 350, 643 |
| BsmI | GAATGC | 1 cut(s) | 774 |
| BsnI | GGCC | 2 cut(s) | 290, 497 |
| BsoBI | CYCGRG | 2 cut(s) | 348, 1245 |
| Bsp1286I | GDGCHC | 3 cut(s) | 733, 1318, 1456 |
| Bsp13I | TCCGGA | 1 cut(s) | 262 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 465 |
| Bsp68I | TCGCGA | 1 cut(s) | 1781 |
| BspACI | CCGC | 9 cut(s) | 48, 155, 378, 499, 604, 906, 1060, 1417, 1746 |
| BspANI | GGCC | 2 cut(s) | 290, 497 |
| BspDI | ATCGAT | 2 cut(s) | 1389, 1560 |
| BspEI | TCCGGA | 1 cut(s) | 262 |
| BspFNI | CGCG | 2 cut(s) | 59, 1781 |
| BspLI | GGNNCC | 2 cut(s) | 943, 1909 |
| BspMAI | CTGCAG | 1 cut(s) | 82 |
| BspMI | ACCTGC | 1 cut(s) | 1907 |
| BspOI | GCTAGC | 1 cut(s) | 1154 |
| BspPI | GGATC | 4 cut(s) | 254, 308, 929, 1734 |
| BspQI | GCTCTTC | 2 cut(s) | 1388, 1590 |
| BspT107I | GGYRCC | 1 cut(s) | 941 |
| BsrBI | CCGCTC | 2 cut(s) | 908, 1417 |
| BsrDI | GCAATG | 1 cut(s) | 1055 |
| BsrFI | RCCGGY | 1 cut(s) | 157 |
| BsrI | ACTGG | 3 cut(s) | 1096, 1355, 1486 |
| BssAI | RCCGGY | 1 cut(s) | 157 |
| BssECI | CCNNGG | 3 cut(s) | 215, 945, 1022 |
| BssNI | GRCGYC | 1 cut(s) | 161 |
| BssSI | CACGAG | 2 cut(s) | 732, 1041 |
| BssT1I | CCWWGG | 2 cut(s) | 945, 1022 |
| Bst2BI | CACGAG | 2 cut(s) | 732, 1041 |
| Bst2UI | CCWGG | 3 cut(s) | 1221, 1527, 1587 |
| Bst4CI | ACNGT | 4 cut(s) | 183, 1214, 1344, 1556 |
| Bst6I | CTCTTC | 5 cut(s) | 348, 627, 1388, 1475, 1590 |
| BstACI | GRCGYC | 1 cut(s) | 161 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1460 |
| BstBAI | YACGTR | 1 cut(s) | 964 |
| BstEII | GGTNACC | 1 cut(s) | 1481 |
| BstF5I | GGATG | 2 cut(s) | 534, 760 |
| BstFNI | CGCG | 2 cut(s) | 59, 1781 |
| BstH2I | RGCGCY | 2 cut(s) | 1511, 1603 |
| BstHHI | GCGC | 6 cut(s) | 61, 388, 1122, 1510, 1602, 1823 |
| BstMAI | GTCTC | 4 cut(s) | 350, 643, 683, 1559 |
| BstNI | CCWGG | 3 cut(s) | 1221, 1527, 1587 |
| BstPI | GGTNACC | 1 cut(s) | 1481 |
| BstSCI | CCNGG | 4 cut(s) | 1219, 1525, 1585, 1660 |
| BstSFI | CTRYAG | 1 cut(s) | 78 |
| BstSLI | GKGCMC | 1 cut(s) | 1456 |
| BstSNI | TACGTA | 1 cut(s) | 964 |
| BstUI | CGCG | 2 cut(s) | 59, 1781 |
| BstV1I | GCAGC | 9 cut(s) | 28, 61, 64, 151, 926, 1228, 1705, 1729, 1792 |
| BstV2I | GAAGAC | 1 cut(s) | 1238 |
| BstX2I | RGATCY | 3 cut(s) | 921, 1262, 1726 |
| BstYI | RGATCY | 3 cut(s) | 921, 1262, 1726 |
| Bsu15I | ATCGAT | 2 cut(s) | 1389, 1560 |
| BsuRI | GGCC | 2 cut(s) | 290, 497 |
| BsuTUI | ATCGAT | 2 cut(s) | 1389, 1560 |
| BtsCI | GGATG | 2 cut(s) | 534, 760 |
| BtsI | GCAGTG | 1 cut(s) | 1551 |
| BtsIMutI | CAGTG | 1 cut(s) | 1551 |
| BtuMI | TCGCGA | 1 cut(s) | 1781 |
| BveI | ACCTGC | 1 cut(s) | 1907 |
| CaiI | CAGNNNCTG | 2 cut(s) | 719, 1550 |
| CfoI | GCGC | 6 cut(s) | 61, 388, 1122, 1510, 1602, 1823 |
| Cfr10I | RCCGGY | 1 cut(s) | 157 |
| Cfr13I | GGNCC | 4 cut(s) | 86, 496, 1214, 1353 |
| ClaI | ATCGAT | 2 cut(s) | 1389, 1560 |
| CseI | GACGC | 2 cut(s) | 150, 1847 |
| CsiI | ACCWGGT | 1 cut(s) | 1525 |
| Csp6I | GTAC | 4 cut(s) | 855, 1018, 1476, 1633 |
| CviAII | CATG | 2 cut(s) | 317, 1432 |
| CviQI | GTAC | 4 cut(s) | 855, 1018, 1476, 1633 |
| DraI | TTTAAA | 1 cut(s) | 397 |
| Eam1104I | CTCTTC | 5 cut(s) | 348, 627, 1388, 1475, 1590 |
| EarI | CTCTTC | 5 cut(s) | 348, 627, 1388, 1475, 1590 |
| EciI | GGCGGA | 1 cut(s) | 144 |
| Ecl136II | GAGCTC | 2 cut(s) | 731, 1316 |
| Eco105I | TACGTA | 1 cut(s) | 964 |
| Eco130I | CCWWGG | 2 cut(s) | 945, 1022 |
| Eco147I | AGGCCT | 1 cut(s) | 290 |
| Eco24I | GRGCYC | 2 cut(s) | 733, 1318 |
| Eco47I | GGWCC | 3 cut(s) | 86, 1214, 1353 |
| Eco47III | AGCGCT | 2 cut(s) | 1509, 1601 |
| Eco53kI | GAGCTC | 2 cut(s) | 731, 1316 |
| Eco57I | CTGAAG | 3 cut(s) | 231, 438, 741 |
| Eco88I | CYCGRG | 2 cut(s) | 348, 1245 |
| Eco91I | GGTNACC | 1 cut(s) | 1481 |
| EcoICRI | GAGCTC | 2 cut(s) | 731, 1316 |
| EcoO65I | GGTNACC | 1 cut(s) | 1481 |
| EcoRI | GAATTC | 1 cut(s) | 1574 |
| EcoRII | CCWGG | 3 cut(s) | 1219, 1525, 1585 |
| EcoT14I | CCWWGG | 2 cut(s) | 945, 1022 |
| EcoT22I | ATGCAT | 2 cut(s) | 1282, 1405 |
| EcoT38I | GRGCYC | 2 cut(s) | 733, 1318 |
| ErhI | CCWWGG | 2 cut(s) | 945, 1022 |
| Esp3I | CGTCTC | 2 cut(s) | 350, 643 |
| FaeI | CATG | 2 cut(s) | 320, 1435 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1358, 1390 |
| FatI | CATG | 2 cut(s) | 316, 1431 |
| FauI | CCCGC | 3 cut(s) | 506, 597, 1053 |
| FblI | GTMKAC | 1 cut(s) | 1079 |
| FokI | GGATG | 2 cut(s) | 541, 767 |
| FriOI | GRGCYC | 2 cut(s) | 733, 1318 |
| FspBI | CTAG | 7 cut(s) | 38, 1151, 1271, 1505, 1535, 1625, 1901 |
| GlaI | GCGC | 6 cut(s) | 60, 387, 1121, 1509, 1601, 1822 |
| GsaI | CCCAGC | 2 cut(s) | 255, 921 |
| GsuI | CTGGAG | 2 cut(s) | 976, 1608 |
| HaeII | RGCGCY | 2 cut(s) | 1511, 1603 |
| HaeIII | GGCC | 2 cut(s) | 290, 497 |
| HapII | CCGG | 3 cut(s) | 158, 263, 1661 |
| HgaI | GACGC | 2 cut(s) | 150, 1847 |
| HhaI | GCGC | 6 cut(s) | 61, 388, 1122, 1510, 1602, 1823 |
| Hin1I | GRCGYC | 1 cut(s) | 161 |
| Hin1II | CATG | 2 cut(s) | 320, 1435 |
| Hin6I | GCGC | 6 cut(s) | 59, 386, 1120, 1508, 1600, 1821 |
| HinP1I | GCGC | 6 cut(s) | 59, 386, 1120, 1508, 1600, 1821 |
| HincII | GTYRAC | 1 cut(s) | 760 |
| HindII | GTYRAC | 1 cut(s) | 760 |
| HindIII | AAGCTT | 2 cut(s) | 743, 1607 |
| HpaII | CCGG | 3 cut(s) | 158, 263, 1661 |
| HphI | GGTGA | 4 cut(s) | 448, 1118, 1493, 1541 |
| Hpy166II | GTNNAC | 6 cut(s) | 375, 760, 1053, 1080, 1217, 1454 |
| Hpy188I | TCNGA | 9 cut(s) | 9, 166, 205, 219, 225, 237, 751, 1196, 1853 |
| Hpy8I | GTNNAC | 6 cut(s) | 375, 760, 1053, 1080, 1217, 1454 |
| Hpy99I | CGWCG | 3 cut(s) | 67, 166, 621 |
| HpyAV | CCTTC | 4 cut(s) | 716, 838, 932, 996 |
| HpyCH4III | ACNGT | 4 cut(s) | 183, 1214, 1344, 1556 |
| HpyCH4IV | ACGT | 2 cut(s) | 685, 963 |
| HpySE526I | ACGT | 2 cut(s) | 685, 963 |
| Hsp92I | GRCGYC | 1 cut(s) | 161 |
| Hsp92II | CATG | 2 cut(s) | 320, 1435 |
| HspAI | GCGC | 6 cut(s) | 59, 386, 1120, 1508, 1600, 1821 |
| Kpn2I | TCCGGA | 1 cut(s) | 262 |
| KroI | GCCGGC | 1 cut(s) | 157 |
| KroNI | GCCGGC | 1 cut(s) | 159 |
| LguI | GCTCTTC | 2 cut(s) | 1388, 1590 |
| LmnI | GCTCC | 7 cut(s) | 214, 274, 281, 957, 1309, 1313, 1674 |
| Lsp1109I | GCAGC | 9 cut(s) | 28, 61, 64, 151, 926, 1228, 1705, 1729, 1792 |
| LweI | GCATC | 5 cut(s) | 196, 519, 1390, 1891, 1903 |
| MabI | ACCWGGT | 1 cut(s) | 1525 |
| MaeI | CTAG | 7 cut(s) | 38, 1151, 1271, 1505, 1535, 1625, 1901 |
| MaeII | ACGT | 2 cut(s) | 685, 963 |
| MaeIII | GTNAC | 4 cut(s) | 1324, 1481, 1717, 1919 |
| MbiI | CCGCTC | 2 cut(s) | 908, 1417 |
| MfeI | CAATTG | 1 cut(s) | 1701 |
| MflI | RGATCY | 3 cut(s) | 921, 1262, 1726 |
| MhlI | GDGCHC | 3 cut(s) | 733, 1318, 1456 |
| MluCI | AATT | 8 cut(s) | 12, 68, 597, 882, 993, 1574, 1701, 1784 |
| MlyI | GAGTC | 4 cut(s) | 340, 1085, 1532, 1561 |
| MmeI | TCCRAC | 3 cut(s) | 144, 252, 874 |
| Mph1103I | ATGCAT | 2 cut(s) | 1282, 1405 |
| MreI | CGCCGGCG | 1 cut(s) | 157 |
| MroI | TCCGGA | 1 cut(s) | 262 |
| MroNI | GCCGGC | 1 cut(s) | 157 |
| MroXI | GAANNNNTTC | 2 cut(s) | 244, 636 |
| MseI | TTAA | 2 cut(s) | 342, 396 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1408 |
| MspA1I | CMGCKG | 2 cut(s) | 251, 917 |
| MspI | CCGG | 3 cut(s) | 158, 263, 1661 |
| MspR9I | CCNGG | 4 cut(s) | 1221, 1527, 1587, 1662 |
| MunI | CAATTG | 1 cut(s) | 1701 |
| Mva1269I | GAATGC | 1 cut(s) | 774 |
| MvaI | CCWGG | 3 cut(s) | 1221, 1527, 1587 |
| MvnI | CGCG | 2 cut(s) | 59, 1781 |
| NaeI | GCCGGC | 1 cut(s) | 159 |
| NciI | CCSGG | 1 cut(s) | 1662 |
| NgoMIV | GCCGGC | 1 cut(s) | 157 |
| NheI | GCTAGC | 1 cut(s) | 1150 |
| NlaIII | CATG | 2 cut(s) | 320, 1435 |
| NlaIV | GGNNCC | 2 cut(s) | 943, 1909 |
| NmuCI | GTSAC | 1 cut(s) | 1481 |
| NruI | TCGCGA | 1 cut(s) | 1781 |
| NsiI | ATGCAT | 2 cut(s) | 1282, 1405 |
| PaeR7I | CTCGAG | 1 cut(s) | 348 |
| PceI | AGGCCT | 1 cut(s) | 290 |
| PciSI | GCTCTTC | 2 cut(s) | 1388, 1590 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1395 |
| PctI | GAATGC | 1 cut(s) | 774 |
| PdiI | GCCGGC | 1 cut(s) | 159 |
| PdmI | GAANNNNTTC | 2 cut(s) | 244, 636 |
| Pfl23II | CGTACG | 1 cut(s) | 1475 |
| PflFI | GACNNNGTC | 1 cut(s) | 1499 |
| PleI | GAGTC | 4 cut(s) | 340, 1084, 1532, 1561 |
| PpsI | GAGTC | 4 cut(s) | 340, 1084, 1532, 1561 |
| Ppu21I | YACGTR | 1 cut(s) | 964 |
| Psp124BI | GAGCTC | 2 cut(s) | 733, 1318 |
| Psp6I | CCWGG | 3 cut(s) | 1219, 1525, 1585 |
| PspEI | GGTNACC | 1 cut(s) | 1481 |
| PspFI | CCCAGC | 2 cut(s) | 251, 917 |
| PspGI | CCWGG | 3 cut(s) | 1219, 1525, 1585 |
| PspLI | CGTACG | 1 cut(s) | 1475 |
| PspN4I | GGNNCC | 2 cut(s) | 943, 1909 |
| PspPI | GGNCC | 4 cut(s) | 86, 496, 1214, 1353 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1412, 1444 |
| PstI | CTGCAG | 1 cut(s) | 82 |
| PstNI | CAGNNNCTG | 2 cut(s) | 719, 1550 |
| PsuI | RGATCY | 3 cut(s) | 921, 1262, 1726 |
| PsyI | GACNNNGTC | 1 cut(s) | 1499 |
| PvuII | CAGCTG | 2 cut(s) | 251, 917 |
| RruI | TCGCGA | 1 cut(s) | 1781 |
| RsaI | GTAC | 4 cut(s) | 856, 1019, 1477, 1634 |
| RsaNI | GTAC | 4 cut(s) | 855, 1018, 1476, 1633 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1408 |
| SacI | GAGCTC | 2 cut(s) | 733, 1318 |
| SapI | GCTCTTC | 2 cut(s) | 1388, 1590 |
| SaqAI | TTAA | 2 cut(s) | 342, 396 |
| Sau96I | GGNCC | 4 cut(s) | 86, 496, 1214, 1353 |
| SchI | GAGTC | 4 cut(s) | 340, 1085, 1532, 1561 |
| ScrFI | CCNGG | 4 cut(s) | 1221, 1527, 1587, 1662 |
| SduI | GDGCHC | 3 cut(s) | 733, 1318, 1456 |
| SexAI | ACCWGGT | 1 cut(s) | 1525 |
| SfaNI | GCATC | 5 cut(s) | 196, 519, 1390, 1891, 1903 |
| SfcI | CTRYAG | 1 cut(s) | 78 |
| Sfr274I | CTCGAG | 1 cut(s) | 348 |
| SgrAI | CRCCGGYG | 1 cut(s) | 157 |
| SinI | GGWCC | 3 cut(s) | 86, 1214, 1353 |
| SlaI | CTCGAG | 1 cut(s) | 348 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1408 |
| SmlI | CTYRAG | 1 cut(s) | 348 |
| SmoI | CTYRAG | 1 cut(s) | 348 |
| SnaBI | TACGTA | 1 cut(s) | 964 |
| Sse9I | AATT | 8 cut(s) | 12, 68, 597, 882, 993, 1574, 1701, 1784 |
| SseBI | AGGCCT | 1 cut(s) | 290 |
| SsiI | CCGC | 9 cut(s) | 48, 155, 378, 499, 604, 906, 1060, 1417, 1746 |
| SspI | AATATT | 1 cut(s) | 975 |
| SspMI | CTAG | 7 cut(s) | 38, 1151, 1271, 1505, 1535, 1625, 1901 |
| SstI | GAGCTC | 2 cut(s) | 733, 1318 |
| StuI | AGGCCT | 1 cut(s) | 290 |
| StyD4I | CCNGG | 4 cut(s) | 1219, 1525, 1585, 1660 |
| StyI | CCWWGG | 2 cut(s) | 945, 1022 |
| TaaI | ACNGT | 4 cut(s) | 183, 1214, 1344, 1556 |
| TaiI | ACGT | 2 cut(s) | 688, 966 |
| TasI | AATT | 8 cut(s) | 12, 68, 597, 882, 993, 1574, 1701, 1784 |
| TatI | WGTACW | 1 cut(s) | 1632 |
| TauI | GCSGC | 1 cut(s) | 1748 |
| Tru1I | TTAA | 2 cut(s) | 342, 396 |
| Tru9I | TTAA | 2 cut(s) | 342, 396 |
| TscAI | CASTG | 1 cut(s) | 1551 |
| TseFI | GTSAC | 1 cut(s) | 1481 |
| TseI | GCWGC | 9 cut(s) | 41, 74, 77, 139, 914, 1241, 1693, 1742, 1805 |
| Tsp45I | GTSAC | 1 cut(s) | 1481 |
| TspDTI | ATGAA | 4 cut(s) | 519, 558, 1375, 1407 |
| TspGWI | ACGGA | 2 cut(s) | 108, 1463 |
| TspRI | CASTG | 1 cut(s) | 1551 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1499 |
| VneI | GTGCAC | 1 cut(s) | 1452 |
| VpaK11BI | GGWCC | 3 cut(s) | 86, 1214, 1353 |
| XapI | RAATTY | 2 cut(s) | 68, 1574 |
| XbaI | TCTAGA | 2 cut(s) | 1270, 1534 |
| XhoI | CTCGAG | 1 cut(s) | 348 |
| XmiI | GTMKAC | 1 cut(s) | 1079 |
| XmnI | GAANNNNTTC | 2 cut(s) | 244, 636 |
| XspI | CTAG | 7 cut(s) | 38, 1151, 1271, 1505, 1535, 1625, 1901 |
| Zsp2I | ATGCAT | 2 cut(s) | 1282, 1405 |