Domain of unknown function (DUF3523)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03060 AT5G16930 |
| fragaria_vesca | FvH4_7g33981 FvH4_7g33981 FvH4_7g33981 |
| malus_domestica | MD01G1236100.v1.1 MD07G1308800.v1.1 |
| prunus_persica | Prupe.2G326200_v2.0.a1 |
| pyrus_communis | pycom01g24410 pycom07g28090 |
| rosa_chinensis | RchiOBHm_Chr1g0384221 |
| rosa_laevigata | RLG00000026058 |
| rosa_multiflora | Rmu_sc0005139.1_g000003 Rmu_sc0014578.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00276840 |
| rosa_rugosa | Rorug01G0445900 |
| rosa_samantha | Rh1AG471400 Rh1BG429200 Rh1CG441800 Rh1DG461900 |
| rosa_wichuraiana | Rw1G040110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1883 |
| Acc36I | ACCTGC | 1 cut(s) | 367 |
| AccB1I | GGYRCC | 2 cut(s) | 1064, 1198 |
| AccBSI | CCGCTC | 1 cut(s) | 289 |
| AccI | GTMKAC | 3 cut(s) | 188, 664, 1875 |
| AccIII | TCCGGA | 1 cut(s) | 1485 |
| AciI | CCGC | 6 cut(s) | 281, 289, 761, 1706, 1820, 1920 |
| AclWI | GGATC | 4 cut(s) | 266, 643, 1551, 1844 |
| AcsI | RAATTY | 1 cut(s) | 1586 |
| AcuI | CTGAAG | 2 cut(s) | 437, 1127 |
| AcyI | GRCGYC | 1 cut(s) | 1199 |
| AfaI | GTAC | 3 cut(s) | 342, 1031, 1646 |
| AfeI | AGCGCT | 1 cut(s) | 1613 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1023, 1040, 1238, 1504, 1540, 1598, 1819 |
| AgsI | TTSAA | 6 cut(s) | 347, 388, 431, 865, 1586, 1696 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 446 |
| AjnI | CCWGG | 4 cut(s) | 1231, 1537, 1597, 1672 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1660, 1692 |
| AleI | CACNNNNGTG | 1 cut(s) | 35 |
| Alw26I | GTCTC | 4 cut(s) | 362, 433, 1077, 1693 |
| AlwI | GGATC | 4 cut(s) | 266, 643, 1551, 1844 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 41, 1387 |
| Aor13HI | TCCGGA | 1 cut(s) | 1485 |
| Aor51HI | AGCGCT | 1 cut(s) | 1613 |
| AoxI | GGCC | 3 cut(s) | 85, 300, 420 |
| ApeKI | GCWGC | 9 cut(s) | 41, 200, 398, 926, 1253, 1621, 1754, 1757, 1817 |
| ApoI | RAATTY | 1 cut(s) | 1586 |
| AspLEI | GCGC | 5 cut(s) | 163, 490, 1201, 1466, 1614 |
| AspS9I | GGNCC | 4 cut(s) | 86, 421, 1226, 1325 |
| AsuC2I | CCSGG | 1 cut(s) | 193 |
| AsuHPI | GGTGA | 4 cut(s) | 93, 973, 1130, 1505 |
| AsuNHI | GCTAGC | 1 cut(s) | 472 |
| AvaII | GGWCC | 2 cut(s) | 1226, 1325 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1337, 1370 |
| BanI | GGYRCC | 2 cut(s) | 1064, 1198 |
| BanII | GRGCYC | 1 cut(s) | 745 |
| BauI | CACGAG | 2 cut(s) | 1074, 1349 |
| BbsI | GAAGAC | 2 cut(s) | 14, 1250 |
| BbvCI | CCTCAGC | 1 cut(s) | 46 |
| BbvI | GCAGC | 9 cut(s) | 28, 187, 385, 913, 1240, 1608, 1766, 1769, 1804 |
| BccI | CCATC | 5 cut(s) | 77, 1006, 1097, 1258, 1795 |
| BceAI | ACGGC | 1 cut(s) | 148 |
| BciT130I | CCWGG | 4 cut(s) | 1233, 1539, 1599, 1674 |
| BclI | TGATCA | 3 cut(s) | 241, 844, 1005 |
| BcnI | CCSGG | 1 cut(s) | 193 |
| BcoDI | GTCTC | 4 cut(s) | 362, 433, 1077, 1693 |
| BfaI | CTAG | 5 cut(s) | 327, 473, 758, 923, 1257 |
| BfmI | CTRYAG | 2 cut(s) | 399, 927 |
| BfoI | RGCGCY | 2 cut(s) | 1202, 1615 |
| BfuAI | ACCTGC | 1 cut(s) | 367 |
| BlpI | GCTNAGC | 3 cut(s) | 204, 477, 1890 |
| Bme1390I | CCNGG | 5 cut(s) | 193, 1233, 1539, 1599, 1674 |
| Bme18I | GGWCC | 2 cut(s) | 1226, 1325 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 446 |
| BmgT120I | GGNCC | 4 cut(s) | 86, 421, 1226, 1325 |
| BmiI | GGNNCC | 4 cut(s) | 575, 1066, 1200, 1682 |
| BmrFI | CCNGG | 5 cut(s) | 193, 1233, 1539, 1599, 1674 |
| BmsI | GCATC | 5 cut(s) | 187, 490, 531, 1402, 1903 |
| BmtI | GCTAGC | 1 cut(s) | 476 |
| BpiI | GAAGAC | 2 cut(s) | 14, 1250 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1438, 1470 |
| BpmI | CTGGAG | 2 cut(s) | 305, 1215 |
| Bpu10I | CCTNAGC | 2 cut(s) | 46, 276 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 204, 477, 1890 |
| BpuMI | CCSGG | 1 cut(s) | 193 |
| Bsa29I | ATCGAT | 2 cut(s) | 608, 1401 |
| BsaAI | YACGTR | 1 cut(s) | 976 |
| BsaHI | GRCGYC | 1 cut(s) | 1199 |
| BsaJI | CCNNGG | 7 cut(s) | 192, 248, 303, 1034, 1503, 1538, 1598 |
| BsaWI | WCCGGW | 1 cut(s) | 1485 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1296, 1326 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1023, 1040, 1238, 1504, 1540, 1598, 1819 |
| Bse1I | ACTGG | 3 cut(s) | 1495, 1498, 1917 |
| Bse3DI | GCAATG | 2 cut(s) | 244, 1647 |
| BseAI | TCCGGA | 1 cut(s) | 1485 |
| BseBI | CCWGG | 4 cut(s) | 1233, 1539, 1599, 1674 |
| BseCI | ATCGAT | 2 cut(s) | 608, 1401 |
| BseDI | CCNNGG | 7 cut(s) | 192, 248, 303, 1034, 1503, 1538, 1598 |
| BseGI | GGATG | 5 cut(s) | 202, 244, 526, 546, 1315 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1023, 1040, 1238, 1504, 1540, 1598, 1819 |
| BseMI | GCAATG | 2 cut(s) | 244, 1647 |
| BseMII | CTCAG | 8 cut(s) | 60, 195, 267, 491, 678, 795, 1667, 1881 |
| BseNI | ACTGG | 3 cut(s) | 1495, 1498, 1917 |
| BseRI | GAGGAG | 8 cut(s) | 169, 172, 201, 204, 207, 210, 213, 1622 |
| BseXI | GCAGC | 9 cut(s) | 28, 187, 385, 913, 1240, 1608, 1766, 1769, 1804 |
| BseYI | CCCAGC | 1 cut(s) | 263 |
| Bsh1285I | CGRYCG | 1 cut(s) | 192 |
| BshFI | GGCC | 3 cut(s) | 87, 302, 422 |
| BshNI | GGYRCC | 2 cut(s) | 1064, 1198 |
| BshVI | ATCGAT | 2 cut(s) | 608, 1401 |
| BsiEI | CGRYCG | 1 cut(s) | 192 |
| BsiSI | CCGG | 2 cut(s) | 192, 1486 |
| BslFI | GGGAC | 1 cut(s) | 1005 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1023, 1040, 1238, 1504, 1540, 1598, 1819 |
| BsmAI | GTCTC | 4 cut(s) | 362, 433, 1077, 1693 |
| BsmFI | GGGAC | 1 cut(s) | 1005 |
| BsmI | GAATGC | 2 cut(s) | 394, 1415 |
| BsnI | GGCC | 3 cut(s) | 87, 302, 422 |
| Bsp1286I | GDGCHC | 1 cut(s) | 745 |
| Bsp13I | TCCGGA | 1 cut(s) | 1485 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 204, 477, 1890 |
| BspACI | CCGC | 6 cut(s) | 281, 289, 761, 1706, 1820, 1920 |
| BspANI | GGCC | 3 cut(s) | 87, 302, 422 |
| BspCNI | CTCAG | 8 cut(s) | 59, 196, 268, 490, 679, 796, 1666, 1882 |
| BspDI | ATCGAT | 2 cut(s) | 608, 1401 |
| BspEI | TCCGGA | 1 cut(s) | 1485 |
| BspLI | GGNNCC | 4 cut(s) | 575, 1066, 1200, 1682 |
| BspMAI | CTGCAG | 2 cut(s) | 403, 931 |
| BspMI | ACCTGC | 1 cut(s) | 367 |
| BspOI | GCTAGC | 1 cut(s) | 476 |
| BspPI | GGATC | 4 cut(s) | 266, 643, 1551, 1844 |
| BspQI | GCTCTTC | 1 cut(s) | 1223 |
| BspT107I | GGYRCC | 2 cut(s) | 1064, 1198 |
| BsrBI | CCGCTC | 1 cut(s) | 289 |
| BsrDI | GCAATG | 2 cut(s) | 244, 1647 |
| BsrI | ACTGG | 3 cut(s) | 1495, 1498, 1917 |
| BssECI | CCNNGG | 7 cut(s) | 192, 248, 303, 1034, 1503, 1538, 1598 |
| BssNI | GRCGYC | 1 cut(s) | 1199 |
| BssSI | CACGAG | 2 cut(s) | 1074, 1349 |
| BssT1I | CCWWGG | 3 cut(s) | 303, 1034, 1503 |
| Bst2BI | CACGAG | 2 cut(s) | 1074, 1349 |
| Bst2UI | CCWGG | 4 cut(s) | 1233, 1539, 1599, 1674 |
| Bst4CI | ACNGT | 2 cut(s) | 794, 1535 |
| Bst6I | CTCTTC | 6 cut(s) | 145, 360, 530, 1146, 1223, 1599 |
| BstACI | GRCGYC | 1 cut(s) | 1199 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 41, 398, 1472 |
| BstBAI | YACGTR | 1 cut(s) | 976 |
| BstC8I | GCNNGC | 6 cut(s) | 474, 511, 546, 624, 633, 1918 |
| BstDEI | CTNAG | 9 cut(s) | 46, 150, 204, 276, 477, 687, 804, 1653, 1890 |
| BstEII | GGTNACC | 1 cut(s) | 1493 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1038 |
| BstF5I | GGATG | 5 cut(s) | 202, 244, 526, 546, 1315 |
| BstH2I | RGCGCY | 2 cut(s) | 1202, 1615 |
| BstHHI | GCGC | 5 cut(s) | 163, 490, 1201, 1466, 1614 |
| BstMAI | GTCTC | 4 cut(s) | 362, 433, 1077, 1693 |
| BstMCI | CGRYCG | 1 cut(s) | 192 |
| BstNI | CCWGG | 4 cut(s) | 1233, 1539, 1599, 1674 |
| BstNSI | RCATGY | 1 cut(s) | 1216 |
| BstPI | GGTNACC | 1 cut(s) | 1493 |
| BstSCI | CCNGG | 5 cut(s) | 191, 1231, 1537, 1597, 1672 |
| BstSFI | CTRYAG | 2 cut(s) | 399, 927 |
| BstV1I | GCAGC | 9 cut(s) | 28, 187, 385, 913, 1240, 1608, 1766, 1769, 1804 |
| BstV2I | GAAGAC | 2 cut(s) | 14, 1250 |
| BstX2I | RGATCY | 2 cut(s) | 648, 1543 |
| BstYI | RGATCY | 2 cut(s) | 648, 1543 |
| Bsu15I | ATCGAT | 2 cut(s) | 608, 1401 |
| BsuRI | GGCC | 3 cut(s) | 87, 302, 422 |
| BsuTUI | ATCGAT | 2 cut(s) | 608, 1401 |
| BtsCI | GGATG | 5 cut(s) | 202, 244, 526, 546, 1315 |
| BtsI | GCAGTG | 1 cut(s) | 42 |
| BtsIMutI | CAGTG | 3 cut(s) | 42, 413, 1001 |
| BveI | ACCTGC | 1 cut(s) | 367 |
| Cac8I | GCNNGC | 6 cut(s) | 474, 511, 546, 624, 633, 1918 |
| CaiI | CAGNNNCTG | 2 cut(s) | 41, 1387 |
| CfoI | GCGC | 5 cut(s) | 163, 490, 1201, 1466, 1614 |
| Cfr13I | GGNCC | 4 cut(s) | 86, 421, 1226, 1325 |
| ClaI | ATCGAT | 2 cut(s) | 608, 1401 |
| CseI | GACGC | 1 cut(s) | 650 |
| CsiI | ACCWGGT | 1 cut(s) | 1672 |
| Csp6I | GTAC | 3 cut(s) | 341, 1030, 1645 |
| CviAII | CATG | 2 cut(s) | 746, 1213 |
| CviQI | GTAC | 3 cut(s) | 341, 1030, 1645 |
| DdeI | CTNAG | 9 cut(s) | 46, 150, 204, 276, 477, 687, 804, 1653, 1890 |
| DinI | GGCGCC | 1 cut(s) | 1200 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1883 |
| DriI | GACNNNNNGTC | 1 cut(s) | 446 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1883 |
| Eam1104I | CTCTTC | 6 cut(s) | 145, 360, 530, 1146, 1223, 1599 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 446 |
| EarI | CTCTTC | 6 cut(s) | 145, 360, 530, 1146, 1223, 1599 |
| EciI | GGCGGA | 1 cut(s) | 1935 |
| Eco130I | CCWWGG | 3 cut(s) | 303, 1034, 1503 |
| Eco147I | AGGCCT | 1 cut(s) | 302 |
| Eco24I | GRGCYC | 1 cut(s) | 745 |
| Eco47I | GGWCC | 2 cut(s) | 1226, 1325 |
| Eco47III | AGCGCT | 1 cut(s) | 1613 |
| Eco57I | CTGAAG | 2 cut(s) | 437, 1127 |
| Eco91I | GGTNACC | 1 cut(s) | 1493 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1038 |
| EcoO65I | GGTNACC | 1 cut(s) | 1493 |
| EcoRI | GAATTC | 1 cut(s) | 1586 |
| EcoRII | CCWGG | 4 cut(s) | 1231, 1537, 1597, 1672 |
| EcoT14I | CCWWGG | 3 cut(s) | 303, 1034, 1503 |
| EcoT22I | ATGCAT | 3 cut(s) | 19, 1294, 1417 |
| EcoT38I | GRGCYC | 1 cut(s) | 745 |
| EgeI | GGCGCC | 1 cut(s) | 1200 |
| EheI | GGCGCC | 1 cut(s) | 1200 |
| ErhI | CCWWGG | 3 cut(s) | 303, 1034, 1503 |
| FaeI | CATG | 2 cut(s) | 749, 1216 |
| FaqI | GGGAC | 1 cut(s) | 1005 |
| FatI | CATG | 2 cut(s) | 745, 1212 |
| FauI | CCCGC | 1 cut(s) | 282 |
| FauNDI | CATATG | 1 cut(s) | 13 |
| FbaI | TGATCA | 3 cut(s) | 241, 844, 1005 |
| FblI | GTMKAC | 3 cut(s) | 188, 664, 1875 |
| FokI | GGATG | 5 cut(s) | 209, 231, 533, 553, 1322 |
| FriOI | GRGCYC | 1 cut(s) | 745 |
| FspBI | CTAG | 5 cut(s) | 327, 473, 758, 923, 1257 |
| GlaI | GCGC | 5 cut(s) | 162, 489, 1200, 1465, 1613 |
| GsaI | CCCAGC | 1 cut(s) | 267 |
| GsuI | CTGGAG | 2 cut(s) | 305, 1215 |
| HaeII | RGCGCY | 2 cut(s) | 1202, 1615 |
| HaeIII | GGCC | 3 cut(s) | 87, 302, 422 |
| HapII | CCGG | 2 cut(s) | 192, 1486 |
| HgaI | GACGC | 1 cut(s) | 650 |
| HhaI | GCGC | 5 cut(s) | 163, 490, 1201, 1466, 1614 |
| Hin1I | GRCGYC | 1 cut(s) | 1199 |
| Hin1II | CATG | 2 cut(s) | 749, 1216 |
| Hin6I | GCGC | 5 cut(s) | 161, 488, 1199, 1464, 1612 |
| HinP1I | GCGC | 5 cut(s) | 161, 488, 1199, 1464, 1612 |
| HincII | GTYRAC | 4 cut(s) | 189, 665, 772, 1731 |
| HindII | GTYRAC | 4 cut(s) | 189, 665, 772, 1731 |
| HinfI | GANTC | 3 cut(s) | 602, 1013, 1550 |
| HpaI | GTTAAC | 1 cut(s) | 772 |
| HpaII | CCGG | 2 cut(s) | 192, 1486 |
| HphI | GGTGA | 4 cut(s) | 93, 973, 1130, 1505 |
| Hpy166II | GTNNAC | 7 cut(s) | 189, 665, 772, 937, 979, 1731, 1876 |
| Hpy188I | TCNGA | 9 cut(s) | 228, 249, 710, 876, 885, 1010, 1146, 1208, 1660 |
| Hpy188III | TCNNGA | 8 cut(s) | 275, 1041, 1278, 1486, 1547, 1637, 1696, 1865 |
| Hpy8I | GTNNAC | 7 cut(s) | 189, 665, 772, 937, 979, 1731, 1876 |
| Hpy99I | CGWCG | 2 cut(s) | 190, 666 |
| HpyCH4III | ACNGT | 2 cut(s) | 794, 1535 |
| HpyCH4IV | ACGT | 2 cut(s) | 975, 1054 |
| HpyF3I | CTNAG | 9 cut(s) | 46, 150, 204, 276, 477, 687, 804, 1653, 1890 |
| HpySE526I | ACGT | 2 cut(s) | 975, 1054 |
| Hsp92I | GRCGYC | 1 cut(s) | 1199 |
| Hsp92II | CATG | 2 cut(s) | 749, 1216 |
| HspAI | GCGC | 5 cut(s) | 161, 488, 1199, 1464, 1612 |
| KasI | GGCGCC | 1 cut(s) | 1198 |
| Kpn2I | TCCGGA | 1 cut(s) | 1485 |
| Ksp22I | TGATCA | 3 cut(s) | 241, 844, 1005 |
| KspAI | GTTAAC | 1 cut(s) | 772 |
| LguI | GCTCTTC | 1 cut(s) | 1223 |
| LmnI | GCTCC | 5 cut(s) | 286, 619, 969, 1321, 1609 |
| Lsp1109I | GCAGC | 9 cut(s) | 28, 187, 385, 913, 1240, 1608, 1766, 1769, 1804 |
| LweI | GCATC | 5 cut(s) | 187, 490, 531, 1402, 1903 |
| MabI | ACCWGGT | 1 cut(s) | 1672 |
| MaeI | CTAG | 5 cut(s) | 327, 473, 758, 923, 1257 |
| MaeII | ACGT | 2 cut(s) | 975, 1054 |
| MaeIII | GTNAC | 3 cut(s) | 913, 1336, 1493 |
| MbiI | CCGCTC | 1 cut(s) | 289 |
| MfeI | CAATTG | 1 cut(s) | 67 |
| MflI | RGATCY | 2 cut(s) | 648, 1543 |
| MhlI | GDGCHC | 1 cut(s) | 745 |
| MluCI | AATT | 6 cut(s) | 67, 425, 524, 1586, 1687, 1837 |
| Mly113I | GGCGCC | 1 cut(s) | 1199 |
| MlyI | GAGTC | 1 cut(s) | 1022 |
| Mph1103I | ATGCAT | 3 cut(s) | 19, 1294, 1417 |
| MroI | TCCGGA | 1 cut(s) | 1485 |
| MseI | TTAA | 2 cut(s) | 771, 1617 |
| MslI | CAYNNNNRTG | 2 cut(s) | 35, 1420 |
| MspA1I | CMGCKG | 2 cut(s) | 283, 1556 |
| MspI | CCGG | 2 cut(s) | 192, 1486 |
| MspR9I | CCNGG | 5 cut(s) | 193, 1233, 1539, 1599, 1674 |
| MunI | CAATTG | 1 cut(s) | 67 |
| Mva1269I | GAATGC | 2 cut(s) | 394, 1415 |
| MvaI | CCWGG | 4 cut(s) | 1233, 1539, 1599, 1674 |
| NarI | GGCGCC | 1 cut(s) | 1199 |
| NciI | CCSGG | 1 cut(s) | 193 |
| NdeI | CATATG | 1 cut(s) | 13 |
| NheI | GCTAGC | 1 cut(s) | 472 |
| NlaIII | CATG | 2 cut(s) | 749, 1216 |
| NlaIV | GGNNCC | 4 cut(s) | 575, 1066, 1200, 1682 |
| NmeAIII | GCCGAG | 1 cut(s) | 607 |
| NmuCI | GTSAC | 2 cut(s) | 913, 1493 |
| NsiI | ATGCAT | 3 cut(s) | 19, 1294, 1417 |
| NspI | RCATGY | 1 cut(s) | 1216 |
| OliI | CACNNNNGTG | 1 cut(s) | 35 |
| PceI | AGGCCT | 1 cut(s) | 302 |
| PciSI | GCTCTTC | 1 cut(s) | 1223 |
| PctI | GAATGC | 2 cut(s) | 394, 1415 |
| PfeI | GAWTC | 2 cut(s) | 602, 1550 |
| PflFI | GACNNNGTC | 1 cut(s) | 1511 |
| PfoI | TCCNGGA | 1 cut(s) | 1231 |
| PleI | GAGTC | 1 cut(s) | 1021 |
| PluTI | GGCGCC | 1 cut(s) | 1202 |
| PpsI | GAGTC | 1 cut(s) | 1021 |
| Ppu21I | YACGTR | 1 cut(s) | 976 |
| Psp6I | CCWGG | 4 cut(s) | 1231, 1537, 1597, 1672 |
| PspEI | GGTNACC | 1 cut(s) | 1493 |
| PspFI | CCCAGC | 1 cut(s) | 263 |
| PspGI | CCWGG | 4 cut(s) | 1231, 1537, 1597, 1672 |
| PspN4I | GGNNCC | 4 cut(s) | 575, 1066, 1200, 1682 |
| PspPI | GGNCC | 4 cut(s) | 86, 421, 1226, 1325 |
| PstI | CTGCAG | 2 cut(s) | 403, 931 |
| PstNI | CAGNNNCTG | 2 cut(s) | 41, 1387 |
| PsuI | RGATCY | 2 cut(s) | 648, 1543 |
| PsyI | GACNNNGTC | 1 cut(s) | 1511 |
| PvuII | CAGCTG | 1 cut(s) | 1556 |
| RsaI | GTAC | 3 cut(s) | 342, 1031, 1646 |
| RsaNI | GTAC | 3 cut(s) | 341, 1030, 1645 |
| RseI | CAYNNNNRTG | 2 cut(s) | 35, 1420 |
| SalI | GTCGAC | 2 cut(s) | 187, 663 |
| SapI | GCTCTTC | 1 cut(s) | 1223 |
| SaqAI | TTAA | 2 cut(s) | 771, 1617 |
| Sau96I | GGNCC | 4 cut(s) | 86, 421, 1226, 1325 |
| SchI | GAGTC | 1 cut(s) | 1022 |
| ScrFI | CCNGG | 5 cut(s) | 193, 1233, 1539, 1599, 1674 |
| SduI | GDGCHC | 1 cut(s) | 745 |
| SexAI | ACCWGGT | 1 cut(s) | 1672 |
| SfaNI | GCATC | 5 cut(s) | 187, 490, 531, 1402, 1903 |
| SfcI | CTRYAG | 2 cut(s) | 399, 927 |
| SfoI | GGCGCC | 1 cut(s) | 1200 |
| SinI | GGWCC | 2 cut(s) | 1226, 1325 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 35, 1420 |
| Sse9I | AATT | 6 cut(s) | 67, 425, 524, 1586, 1687, 1837 |
| SseBI | AGGCCT | 1 cut(s) | 302 |
| SsiI | CCGC | 6 cut(s) | 281, 289, 761, 1706, 1820, 1920 |
| SspDI | GGCGCC | 1 cut(s) | 1198 |
| SspI | AATATT | 1 cut(s) | 987 |
| SspMI | CTAG | 5 cut(s) | 327, 473, 758, 923, 1257 |
| StuI | AGGCCT | 1 cut(s) | 302 |
| StyD4I | CCNGG | 5 cut(s) | 191, 1231, 1537, 1597, 1672 |
| StyI | CCWWGG | 3 cut(s) | 303, 1034, 1503 |
| TaaI | ACNGT | 2 cut(s) | 794, 1535 |
| TaiI | ACGT | 2 cut(s) | 978, 1057 |
| TaqI | TCGA | 5 cut(s) | 188, 270, 608, 664, 1401 |
| TasI | AATT | 6 cut(s) | 67, 425, 524, 1586, 1687, 1837 |
| TatI | WGTACW | 1 cut(s) | 1644 |
| TauI | GCSGC | 1 cut(s) | 283 |
| TfiI | GAWTC | 2 cut(s) | 602, 1550 |
| Tru1I | TTAA | 2 cut(s) | 771, 1617 |
| Tru9I | TTAA | 2 cut(s) | 771, 1617 |
| TscAI | CASTG | 3 cut(s) | 42, 420, 1008 |
| TseFI | GTSAC | 2 cut(s) | 913, 1493 |
| TseI | GCWGC | 9 cut(s) | 41, 200, 398, 926, 1253, 1621, 1754, 1757, 1817 |
| Tsp45I | GTSAC | 2 cut(s) | 913, 1493 |
| TspDTI | ATGAA | 7 cut(s) | 537, 570, 762, 1387, 1419, 1590, 1736 |
| TspGWI | ACGGA | 3 cut(s) | 449, 1673, 1785 |
| TspRI | CASTG | 3 cut(s) | 42, 420, 1008 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1511 |
| VpaK11BI | GGWCC | 2 cut(s) | 1226, 1325 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1038 |
| XapI | RAATTY | 1 cut(s) | 1586 |
| XceI | RCATGY | 1 cut(s) | 1216 |
| XmiI | GTMKAC | 3 cut(s) | 188, 664, 1875 |
| XspI | CTAG | 5 cut(s) | 327, 473, 758, 923, 1257 |
| Zsp2I | ATGCAT | 3 cut(s) | 19, 1294, 1417 |