ATPase family AAA domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03060 AT5G16930 |
| fragaria_vesca | FvH4_7g33981 FvH4_7g33981 FvH4_7g33981 |
| malus_domestica | MD01G1236100.v1.1 MD07G1308800.v1.1 |
| prunus_persica | Prupe.2G326200_v2.0.a1 |
| pyrus_communis | pycom01g24410 pycom07g28090 |
| rosa_chinensis | RchiOBHm_Chr1g0384221 |
| rosa_laevigata | RLG00000026058 |
| rosa_multiflora | Rmu_sc0005139.1_g000003 Rmu_sc0014578.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00276840 |
| rosa_rugosa | Rorug01G0445900 |
| rosa_samantha | Rh1AG471400 Rh1BG429200 Rh1CG441800 Rh1DG461900 |
| rosa_wichuraiana | Rw1G040110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 349 |
| AccB1I | GGYRCC | 2 cut(s) | 275, 1150 |
| AccBSI | CCGCTC | 1 cut(s) | 1381 |
| AccI | GTMKAC | 3 cut(s) | 771, 1046, 1827 |
| AccII | CGCG | 2 cut(s) | 155, 273 |
| AclWI | GGATC | 1 cut(s) | 248 |
| AcoI | YGGCCR | 3 cut(s) | 3, 168, 243 |
| AcsI | RAATTY | 1 cut(s) | 1538 |
| AcuI | CTGAAG | 3 cut(s) | 765, 1079, 1141 |
| AfaI | GTAC | 1 cut(s) | 1598 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1022, 1190, 1456, 1550, 1551 |
| AgsI | TTSAA | 4 cut(s) | 337, 511, 1538, 1648 |
| AjnI | CCWGG | 3 cut(s) | 54, 1183, 1549 |
| Alw21I | GWGCWC | 1 cut(s) | 1420 |
| Alw26I | GTCTC | 1 cut(s) | 344 |
| Alw44I | GTGCAC | 1 cut(s) | 1416 |
| AlwI | GGATC | 1 cut(s) | 248 |
| Ama87I | CYCGRG | 1 cut(s) | 229 |
| AoxI | GGCC | 5 cut(s) | 3, 85, 168, 243, 1317 |
| ApaLI | GTGCAC | 1 cut(s) | 1416 |
| ApoI | RAATTY | 1 cut(s) | 1538 |
| AspLEI | GCGC | 3 cut(s) | 157, 273, 472 |
| AspS9I | GGNCC | 5 cut(s) | 86, 234, 1178, 1277, 1317 |
| AsuC2I | CCSGG | 3 cut(s) | 247, 776, 1491 |
| AsuHPI | GGTGA | 4 cut(s) | 955, 1082, 1457, 1505 |
| AsuII | TTCGAA | 1 cut(s) | 327 |
| AvaI | CYCGRG | 1 cut(s) | 229 |
| AvaII | GGWCC | 3 cut(s) | 234, 1178, 1277 |
| BaeGI | GKGCMC | 2 cut(s) | 727, 1420 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1289, 1322 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanI | GGYRCC | 2 cut(s) | 275, 1150 |
| BanII | GRGCYC | 1 cut(s) | 27 |
| BauI | CACGAG | 1 cut(s) | 1301 |
| Bbv12I | GWGCWC | 1 cut(s) | 1420 |
| BccI | CCATC | 5 cut(s) | 481, 988, 1210, 1623, 1747 |
| BceAI | ACGGC | 1 cut(s) | 100 |
| BciT130I | CCWGG | 3 cut(s) | 56, 1185, 1551 |
| BclI | TGATCA | 2 cut(s) | 826, 862 |
| BcnI | CCSGG | 3 cut(s) | 247, 776, 1491 |
| BcoDI | GTCTC | 1 cut(s) | 344 |
| BfaI | CTAG | 5 cut(s) | 20, 455, 740, 905, 1209 |
| BfmI | CTRYAG | 1 cut(s) | 909 |
| BfuAI | ACCTGC | 1 cut(s) | 349 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 56 |
| BlpI | GCTNAGC | 2 cut(s) | 459, 1842 |
| Bme1390I | CCNGG | 6 cut(s) | 56, 247, 776, 1185, 1491, 1551 |
| Bme18I | GGWCC | 3 cut(s) | 234, 1178, 1277 |
| BmeT110I | CYCGRG | 1 cut(s) | 229 |
| BmgT120I | GGNCC | 5 cut(s) | 86, 234, 1178, 1277, 1317 |
| BmiI | GGNNCC | 4 cut(s) | 26, 277, 1152, 1634 |
| BmrFI | CCNGG | 6 cut(s) | 56, 247, 776, 1185, 1491, 1551 |
| BmsI | GCATC | 6 cut(s) | 175, 181, 301, 472, 513, 1855 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1390, 1422 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1605 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 459, 1842 |
| Bpu14I | TTCGAA | 1 cut(s) | 327 |
| BpuEI | CTTGAG | 1 cut(s) | 390 |
| BpuMI | CCSGG | 3 cut(s) | 247, 776, 1491 |
| BsaJI | CCNNGG | 6 cut(s) | 54, 230, 306, 1016, 1455, 1550 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 9, 39, 371, 401, 1248, 1278 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1022, 1190, 1456, 1550, 1551 |
| Bse118I | RCCGGY | 2 cut(s) | 166, 178 |
| Bse1I | ACTGG | 3 cut(s) | 771, 1447, 1450 |
| Bse3DI | GCAATG | 2 cut(s) | 226, 402 |
| BseBI | CCWGG | 3 cut(s) | 56, 1185, 1551 |
| BseDI | CCNNGG | 6 cut(s) | 54, 230, 306, 1016, 1455, 1550 |
| BseGI | GGATG | 5 cut(s) | 190, 316, 528, 980, 1634 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1022, 1190, 1456, 1550, 1551 |
| BseMI | GCAATG | 2 cut(s) | 226, 402 |
| BseMII | CTCAG | 7 cut(s) | 408, 473, 497, 660, 1518, 1629, 1833 |
| BseNI | ACTGG | 3 cut(s) | 771, 1447, 1450 |
| BseRI | GAGGAG | 3 cut(s) | 17, 186, 1272 |
| BseSI | GKGCMC | 2 cut(s) | 727, 1420 |
| BseX3I | CGGCCG | 1 cut(s) | 243 |
| Bsh1236I | CGCG | 2 cut(s) | 155, 273 |
| Bsh1285I | CGRYCG | 1 cut(s) | 246 |
| BshFI | GGCC | 5 cut(s) | 5, 87, 170, 245, 1319 |
| BshNI | GGYRCC | 2 cut(s) | 275, 1150 |
| BsiEI | CGRYCG | 1 cut(s) | 246 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1420 |
| BsiHKCI | CYCGRG | 1 cut(s) | 229 |
| BsiSI | CCGG | 6 cut(s) | 167, 179, 246, 775, 1491, 1872 |
| BslFI | GGGAC | 2 cut(s) | 987, 1473 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1022, 1190, 1456, 1550, 1551 |
| BsmAI | GTCTC | 1 cut(s) | 344 |
| BsmBI | CGTCTC | 1 cut(s) | 344 |
| BsmFI | GGGAC | 2 cut(s) | 987, 1473 |
| BsnI | GGCC | 5 cut(s) | 5, 87, 170, 245, 1319 |
| BsoBI | CYCGRG | 1 cut(s) | 229 |
| Bsp119I | TTCGAA | 1 cut(s) | 327 |
| Bsp1286I | GDGCHC | 3 cut(s) | 27, 727, 1420 |
| Bsp143I | GATC | 5 cut(s) | 253, 826, 862, 1495, 1516 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 459, 1842 |
| BspANI | GGCC | 5 cut(s) | 5, 87, 170, 245, 1319 |
| BspCNI | CTCAG | 7 cut(s) | 409, 472, 496, 661, 1517, 1628, 1834 |
| BspFNI | CGCG | 2 cut(s) | 155, 273 |
| BspLI | GGNNCC | 4 cut(s) | 26, 277, 1152, 1634 |
| BspMAI | CTGCAG | 1 cut(s) | 913 |
| BspMI | ACCTGC | 1 cut(s) | 349 |
| BspPI | GGATC | 1 cut(s) | 248 |
| BspT104I | TTCGAA | 1 cut(s) | 327 |
| BspT107I | GGYRCC | 2 cut(s) | 275, 1150 |
| BsrBI | CCGCTC | 1 cut(s) | 1381 |
| BsrDI | GCAATG | 2 cut(s) | 226, 402 |
| BsrFI | RCCGGY | 2 cut(s) | 166, 178 |
| BsrI | ACTGG | 3 cut(s) | 771, 1447, 1450 |
| BssAI | RCCGGY | 2 cut(s) | 166, 178 |
| BssECI | CCNNGG | 6 cut(s) | 54, 230, 306, 1016, 1455, 1550 |
| BssMI | GATC | 5 cut(s) | 253, 826, 862, 1495, 1516 |
| BssSI | CACGAG | 1 cut(s) | 1301 |
| BssT1I | CCWWGG | 3 cut(s) | 306, 1016, 1455 |
| Bst2BI | CACGAG | 1 cut(s) | 1301 |
| Bst2UI | CCWGG | 3 cut(s) | 56, 1185, 1551 |
| Bst4CI | ACNGT | 1 cut(s) | 1487 |
| Bst6I | CTCTTC | 5 cut(s) | 115, 342, 512, 741, 1098 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1424 |
| BstBI | TTCGAA | 1 cut(s) | 327 |
| BstC8I | GCNNGC | 8 cut(s) | 61, 168, 402, 493, 528, 606, 913, 1379 |
| BstDEI | CTNAG | 9 cut(s) | 417, 459, 483, 669, 1504, 1605, 1615, 1713, 1842 |
| BstEII | GGTNACC | 1 cut(s) | 1445 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1020, 1188 |
| BstF5I | GGATG | 5 cut(s) | 190, 316, 528, 980, 1634 |
| BstFNI | CGCG | 2 cut(s) | 155, 273 |
| BstHHI | GCGC | 3 cut(s) | 157, 273, 472 |
| BstKTI | GATC | 5 cut(s) | 256, 829, 865, 1498, 1519 |
| BstMAI | GTCTC | 1 cut(s) | 344 |
| BstMBI | GATC | 5 cut(s) | 253, 826, 862, 1495, 1516 |
| BstMCI | CGRYCG | 1 cut(s) | 246 |
| BstNI | CCWGG | 3 cut(s) | 56, 1185, 1551 |
| BstNSI | RCATGY | 1 cut(s) | 1168 |
| BstPI | GGTNACC | 1 cut(s) | 1445 |
| BstSCI | CCNGG | 6 cut(s) | 54, 245, 774, 1183, 1489, 1549 |
| BstSFI | CTRYAG | 1 cut(s) | 909 |
| BstSLI | GKGCMC | 2 cut(s) | 727, 1420 |
| BstUI | CGCG | 2 cut(s) | 155, 273 |
| BstZI | CGGCCG | 1 cut(s) | 243 |
| BsuRI | GGCC | 5 cut(s) | 5, 87, 170, 245, 1319 |
| BtsCI | GGATG | 5 cut(s) | 190, 316, 528, 980, 1634 |
| BtsI | GCAGTG | 1 cut(s) | 69 |
| BtsIMutI | CAGTG | 3 cut(s) | 69, 1244, 1440 |
| BveI | ACCTGC | 1 cut(s) | 349 |
| Cac8I | GCNNGC | 8 cut(s) | 61, 168, 402, 493, 528, 606, 913, 1379 |
| CfoI | GCGC | 3 cut(s) | 157, 273, 472 |
| Cfr10I | RCCGGY | 2 cut(s) | 166, 178 |
| Cfr13I | GGNCC | 5 cut(s) | 86, 234, 1178, 1277, 1317 |
| CseI | GACGC | 1 cut(s) | 1373 |
| Csp6I | GTAC | 1 cut(s) | 1597 |
| CviAII | CATG | 3 cut(s) | 728, 1165, 1396 |
| CviQI | GTAC | 1 cut(s) | 1597 |
| DdeI | CTNAG | 9 cut(s) | 417, 459, 483, 669, 1504, 1605, 1615, 1713, 1842 |
| DpnI | GATC | 5 cut(s) | 255, 828, 864, 1497, 1518 |
| DpnII | GATC | 5 cut(s) | 253, 826, 862, 1495, 1516 |
| EaeI | YGGCCR | 3 cut(s) | 3, 168, 243 |
| EagI | CGGCCG | 1 cut(s) | 243 |
| Eam1104I | CTCTTC | 5 cut(s) | 115, 342, 512, 741, 1098 |
| EarI | CTCTTC | 5 cut(s) | 115, 342, 512, 741, 1098 |
| EciI | GGCGGA | 3 cut(s) | 37, 189, 197 |
| EclXI | CGGCCG | 1 cut(s) | 243 |
| Eco130I | CCWWGG | 3 cut(s) | 306, 1016, 1455 |
| Eco24I | GRGCYC | 1 cut(s) | 27 |
| Eco47I | GGWCC | 3 cut(s) | 234, 1178, 1277 |
| Eco52I | CGGCCG | 1 cut(s) | 243 |
| Eco57I | CTGAAG | 3 cut(s) | 765, 1079, 1141 |
| Eco88I | CYCGRG | 1 cut(s) | 229 |
| Eco91I | GGTNACC | 1 cut(s) | 1445 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1020, 1188 |
| EcoO65I | GGTNACC | 1 cut(s) | 1445 |
| EcoRI | GAATTC | 1 cut(s) | 1538 |
| EcoRII | CCWGG | 3 cut(s) | 54, 1183, 1549 |
| EcoT14I | CCWWGG | 3 cut(s) | 306, 1016, 1455 |
| EcoT38I | GRGCYC | 1 cut(s) | 27 |
| ErhI | CCWWGG | 3 cut(s) | 306, 1016, 1455 |
| Esp3I | CGTCTC | 1 cut(s) | 344 |
| FaeI | CATG | 3 cut(s) | 731, 1168, 1399 |
| FaqI | GGGAC | 2 cut(s) | 987, 1473 |
| FatI | CATG | 3 cut(s) | 727, 1164, 1395 |
| FauI | CCCGC | 2 cut(s) | 73, 157 |
| FauNDI | CATATG | 1 cut(s) | 13 |
| FbaI | TGATCA | 2 cut(s) | 826, 862 |
| FblI | GTMKAC | 3 cut(s) | 771, 1046, 1827 |
| FokI | GGATG | 5 cut(s) | 197, 323, 535, 967, 1641 |
| FriOI | GRGCYC | 1 cut(s) | 27 |
| FspBI | CTAG | 5 cut(s) | 20, 455, 740, 905, 1209 |
| GlaI | GCGC | 3 cut(s) | 156, 272, 471 |
| HaeIII | GGCC | 5 cut(s) | 5, 87, 170, 245, 1319 |
| HapII | CCGG | 6 cut(s) | 167, 179, 246, 775, 1491, 1872 |
| HgaI | GACGC | 1 cut(s) | 1373 |
| HhaI | GCGC | 3 cut(s) | 157, 273, 472 |
| Hin1II | CATG | 3 cut(s) | 731, 1168, 1399 |
| Hin6I | GCGC | 3 cut(s) | 155, 271, 470 |
| HinP1I | GCGC | 3 cut(s) | 155, 271, 470 |
| HincII | GTYRAC | 1 cut(s) | 754 |
| HindII | GTYRAC | 1 cut(s) | 754 |
| HinfI | GANTC | 5 cut(s) | 413, 584, 995, 1502, 1613 |
| HpaI | GTTAAC | 1 cut(s) | 754 |
| HpaII | CCGG | 6 cut(s) | 167, 179, 246, 775, 1491, 1872 |
| HphI | GGTGA | 4 cut(s) | 955, 1082, 1457, 1505 |
| Hpy166II | GTNNAC | 7 cut(s) | 754, 772, 842, 961, 1047, 1418, 1828 |
| Hpy188III | TCNNGA | 7 cut(s) | 257, 1230, 1499, 1589, 1617, 1626, 1817 |
| Hpy8I | GTNNAC | 7 cut(s) | 754, 772, 842, 961, 1047, 1418, 1828 |
| Hpy99I | CGWCG | 5 cut(s) | 86, 166, 615, 648, 1367 |
| HpyAV | CCTTC | 7 cut(s) | 115, 129, 153, 710, 926, 1098, 1165 |
| HpyCH4III | ACNGT | 1 cut(s) | 1487 |
| HpyCH4IV | ACGT | 2 cut(s) | 643, 1036 |
| HpyF3I | CTNAG | 9 cut(s) | 417, 459, 483, 669, 1504, 1605, 1615, 1713, 1842 |
| HpySE526I | ACGT | 2 cut(s) | 643, 1036 |
| Hsp92II | CATG | 3 cut(s) | 731, 1168, 1399 |
| HspAI | GCGC | 3 cut(s) | 155, 271, 470 |
| KroI | GCCGGC | 1 cut(s) | 166 |
| KroNI | GCCGGC | 1 cut(s) | 168 |
| Ksp22I | TGATCA | 2 cut(s) | 826, 862 |
| KspAI | GTTAAC | 1 cut(s) | 754 |
| Kzo9I | GATC | 5 cut(s) | 253, 826, 862, 1495, 1516 |
| LmnI | GCTCC | 6 cut(s) | 30, 199, 268, 601, 951, 1273 |
| LweI | GCATC | 6 cut(s) | 175, 181, 301, 472, 513, 1855 |
| MaeI | CTAG | 5 cut(s) | 20, 455, 740, 905, 1209 |
| MaeII | ACGT | 2 cut(s) | 643, 1036 |
| MaeIII | GTNAC | 6 cut(s) | 895, 1288, 1326, 1445, 1637, 1681 |
| MalI | GATC | 5 cut(s) | 255, 828, 864, 1497, 1518 |
| MbiI | CCGCTC | 1 cut(s) | 1381 |
| MboI | GATC | 5 cut(s) | 253, 826, 862, 1495, 1516 |
| MfeI | CAATTG | 1 cut(s) | 702 |
| MhlI | GDGCHC | 3 cut(s) | 27, 727, 1420 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 4 cut(s) | 702, 872, 1538, 1789 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 3 cut(s) | 1004, 1496, 1607 |
| MmeI | TCCRAC | 2 cut(s) | 246, 619 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroNI | GCCGGC | 1 cut(s) | 166 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 3 cut(s) | 390, 753, 1422 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1372 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 2 cut(s) | 41, 1508 |
| MspI | CCGG | 6 cut(s) | 167, 179, 246, 775, 1491, 1872 |
| MspR9I | CCNGG | 6 cut(s) | 56, 247, 776, 1185, 1491, 1551 |
| MunI | CAATTG | 1 cut(s) | 702 |
| MvaI | CCWGG | 3 cut(s) | 56, 1185, 1551 |
| MvnI | CGCG | 2 cut(s) | 155, 273 |
| NaeI | GCCGGC | 1 cut(s) | 168 |
| NciI | CCSGG | 3 cut(s) | 247, 776, 1491 |
| NdeI | CATATG | 1 cut(s) | 13 |
| NdeII | GATC | 5 cut(s) | 253, 826, 862, 1495, 1516 |
| NgoMIV | GCCGGC | 1 cut(s) | 166 |
| NlaIII | CATG | 3 cut(s) | 731, 1168, 1399 |
| NlaIV | GGNNCC | 4 cut(s) | 26, 277, 1152, 1634 |
| NmuCI | GTSAC | 4 cut(s) | 895, 1326, 1445, 1681 |
| NspI | RCATGY | 1 cut(s) | 1168 |
| NspV | TTCGAA | 1 cut(s) | 327 |
| PdiI | GCCGGC | 1 cut(s) | 168 |
| PfeI | GAWTC | 2 cut(s) | 413, 584 |
| PflFI | GACNNNGTC | 1 cut(s) | 1463 |
| PfoI | TCCNGGA | 1 cut(s) | 1183 |
| PleI | GAGTC | 3 cut(s) | 1003, 1496, 1607 |
| PpsI | GAGTC | 3 cut(s) | 1003, 1496, 1607 |
| Psp6I | CCWGG | 3 cut(s) | 54, 1183, 1549 |
| PspEI | GGTNACC | 1 cut(s) | 1445 |
| PspGI | CCWGG | 3 cut(s) | 54, 1183, 1549 |
| PspN4I | GGNNCC | 4 cut(s) | 26, 277, 1152, 1634 |
| PspPI | GGNCC | 5 cut(s) | 86, 234, 1178, 1277, 1317 |
| PstI | CTGCAG | 1 cut(s) | 913 |
| PsyI | GACNNNGTC | 1 cut(s) | 1463 |
| PvuII | CAGCTG | 2 cut(s) | 41, 1508 |
| RsaI | GTAC | 1 cut(s) | 1598 |
| RsaNI | GTAC | 1 cut(s) | 1597 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1372 |
| SaqAI | TTAA | 3 cut(s) | 390, 753, 1422 |
| Sau3AI | GATC | 5 cut(s) | 253, 826, 862, 1495, 1516 |
| Sau96I | GGNCC | 5 cut(s) | 86, 234, 1178, 1277, 1317 |
| SchI | GAGTC | 3 cut(s) | 1004, 1496, 1607 |
| ScrFI | CCNGG | 6 cut(s) | 56, 247, 776, 1185, 1491, 1551 |
| SduI | GDGCHC | 3 cut(s) | 27, 727, 1420 |
| SfaNI | GCATC | 6 cut(s) | 175, 181, 301, 472, 513, 1855 |
| SfcI | CTRYAG | 1 cut(s) | 909 |
| SfuI | TTCGAA | 1 cut(s) | 327 |
| SgrAI | CRCCGGYG | 1 cut(s) | 178 |
| SinI | GGWCC | 3 cut(s) | 234, 1178, 1277 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1372 |
| SmlI | CTYRAG | 1 cut(s) | 405 |
| SmoI | CTYRAG | 1 cut(s) | 405 |
| Sse9I | AATT | 4 cut(s) | 702, 872, 1538, 1789 |
| SspI | AATATT | 1 cut(s) | 969 |
| SspMI | CTAG | 5 cut(s) | 20, 455, 740, 905, 1209 |
| StyD4I | CCNGG | 6 cut(s) | 54, 245, 774, 1183, 1489, 1549 |
| StyI | CCWWGG | 3 cut(s) | 306, 1016, 1455 |
| TaaI | ACNGT | 1 cut(s) | 1487 |
| TaiI | ACGT | 2 cut(s) | 646, 1039 |
| TaqI | TCGA | 3 cut(s) | 252, 327, 610 |
| TasI | AATT | 4 cut(s) | 702, 872, 1538, 1789 |
| TatI | WGTACW | 1 cut(s) | 1596 |
| TauI | GCSGC | 4 cut(s) | 38, 155, 205, 208 |
| TfiI | GAWTC | 2 cut(s) | 413, 584 |
| Tru1I | TTAA | 3 cut(s) | 390, 753, 1422 |
| Tru9I | TTAA | 3 cut(s) | 390, 753, 1422 |
| TscAI | CASTG | 3 cut(s) | 76, 1251, 1447 |
| TseFI | GTSAC | 4 cut(s) | 895, 1326, 1445, 1681 |
| Tsp45I | GTSAC | 4 cut(s) | 895, 1326, 1445, 1681 |
| TspDTI | ATGAA | 8 cut(s) | 513, 552, 744, 1339, 1371, 1542, 1575, 1688 |
| TspGWI | ACGGA | 3 cut(s) | 1345, 1625, 1737 |
| TspRI | CASTG | 3 cut(s) | 76, 1251, 1447 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1463 |
| VneI | GTGCAC | 1 cut(s) | 1416 |
| VpaK11BI | GGWCC | 3 cut(s) | 234, 1178, 1277 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1020, 1188 |
| XapI | RAATTY | 1 cut(s) | 1538 |
| XceI | RCATGY | 1 cut(s) | 1168 |
| XmiI | GTMKAC | 3 cut(s) | 771, 1046, 1827 |
| XspI | CTAG | 5 cut(s) | 20, 455, 740, 905, 1209 |