ATPase family AAA domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03060 AT5G16930 |
| fragaria_vesca | FvH4_7g33981 FvH4_7g33981 FvH4_7g33981 |
| malus_domestica | MD01G1236100.v1.1 MD07G1308800.v1.1 |
| prunus_persica | Prupe.2G326200_v2.0.a1 |
| pyrus_communis | pycom01g24410 pycom07g28090 |
| rosa_chinensis | RchiOBHm_Chr1g0384221 |
| rosa_laevigata | RLG00000026058 |
| rosa_multiflora | Rmu_sc0005139.1_g000003 Rmu_sc0014578.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00276840 |
| rosa_rugosa | Rorug01G0445900 |
| rosa_samantha | Rh1AG471400 Rh1BG429200 Rh1CG441800 Rh1DG461900 |
| rosa_wichuraiana | Rw1G040110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 938 |
| Acc36I | ACCTGC | 2 cut(s) | 807, 938 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1256 |
| AccBSI | CCGCTC | 1 cut(s) | 1447 |
| AccI | GTMKAC | 2 cut(s) | 682, 1896 |
| AccII | CGCG | 1 cut(s) | 309 |
| AclWI | GGATC | 2 cut(s) | 284, 1865 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 4 cut(s) | 514, 721, 1604, 1931 |
| AcuI | CTGAAG | 3 cut(s) | 468, 1145, 1809 |
| AfaI | GTAC | 1 cut(s) | 1664 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 221, 601, 1058, 1256, 1522, 1616, 1840 |
| AgsI | TTSAA | 8 cut(s) | 109, 406, 436, 503, 767, 883, 975, 1604 |
| AhlI | ACTAGT | 1 cut(s) | 910 |
| AjnI | CCWGG | 3 cut(s) | 266, 1249, 1615 |
| AleI | CACNNNNGTG | 1 cut(s) | 38 |
| Alw21I | GWGCWC | 1 cut(s) | 1486 |
| Alw26I | GTCTC | 2 cut(s) | 380, 593 |
| Alw44I | GTGCAC | 1 cut(s) | 1482 |
| AlwI | GGATC | 2 cut(s) | 284, 1865 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1256, 1405 |
| AoxI | GGCC | 5 cut(s) | 3, 100, 465, 1128, 1383 |
| ApaLI | GTGCAC | 1 cut(s) | 1482 |
| ApoI | RAATTY | 4 cut(s) | 514, 721, 1604, 1931 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 686, 718 |
| AspLEI | GCGC | 3 cut(s) | 187, 309, 311 |
| AspS9I | GGNCC | 5 cut(s) | 101, 796, 1244, 1343, 1383 |
| AsuHPI | GGTGA | 5 cut(s) | 25, 385, 991, 1148, 1523 |
| AsuNHI | GCTAGC | 1 cut(s) | 490 |
| AvaII | GGWCC | 3 cut(s) | 796, 1244, 1343 |
| BaeGI | GKGCMC | 2 cut(s) | 1087, 1486 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1355, 1388 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanII | GRGCYC | 2 cut(s) | 30, 763 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 455, 487 |
| Bbv12I | GWGCWC | 1 cut(s) | 1486 |
| BccI | CCATC | 5 cut(s) | 476, 553, 1024, 1218, 1276 |
| BceAI | ACGGC | 4 cut(s) | 23, 115, 172, 1412 |
| BciT130I | CCWGG | 3 cut(s) | 268, 1251, 1617 |
| BciVI | GTATCC | 1 cut(s) | 448 |
| BclI | TGATCA | 3 cut(s) | 259, 862, 1023 |
| BcoDI | GTCTC | 2 cut(s) | 380, 593 |
| BcuI | ACTAGT | 1 cut(s) | 910 |
| BfaI | CTAG | 6 cut(s) | 345, 491, 528, 710, 911, 1275 |
| BfmI | CTRYAG | 1 cut(s) | 945 |
| BfuAI | ACCTGC | 2 cut(s) | 807, 938 |
| BfuI | GTATCC | 1 cut(s) | 448 |
| BglII | AGATCT | 1 cut(s) | 1691 |
| BlpI | GCTNAGC | 1 cut(s) | 1911 |
| Bme1390I | CCNGG | 3 cut(s) | 268, 1251, 1617 |
| Bme18I | GGWCC | 3 cut(s) | 796, 1244, 1343 |
| BmgT120I | GGNCC | 5 cut(s) | 101, 796, 1244, 1343, 1383 |
| BmiI | GGNNCC | 3 cut(s) | 593, 797, 1703 |
| BmrFI | CCNGG | 3 cut(s) | 268, 1251, 1617 |
| BmrI | ACTGGG | 1 cut(s) | 1266 |
| BmsI | GCATC | 4 cut(s) | 736, 1420, 1839, 1924 |
| BmtI | GCTAGC | 1 cut(s) | 494 |
| BmuI | ACTGGG | 1 cut(s) | 1266 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1456, 1488 |
| BpmI | CTGGAG | 4 cut(s) | 323, 656, 1233, 1962 |
| Bpu10I | CCTNAGC | 3 cut(s) | 294, 1185, 1671 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1911 |
| BsaAI | YACGTR | 1 cut(s) | 994 |
| BsaJI | CCNNGG | 6 cut(s) | 39, 266, 1052, 1346, 1521, 1616 |
| BsaWI | WCCGGW | 1 cut(s) | 218 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 357, 387, 1314, 1344 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 221, 601, 1058, 1256, 1522, 1616, 1840 |
| Bse1I | ACTGG | 2 cut(s) | 1261, 1513 |
| Bse3DI | GCAATG | 2 cut(s) | 262, 1665 |
| BseBI | CCWGG | 3 cut(s) | 268, 1251, 1617 |
| BseDI | CCNNGG | 6 cut(s) | 39, 266, 1052, 1346, 1521, 1616 |
| BseGI | GGATG | 4 cut(s) | 544, 564, 1333, 1830 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 221, 601, 1058, 1256, 1522, 1616, 1840 |
| BseMI | GCAATG | 2 cut(s) | 262, 1665 |
| BseMII | CTCAG | 6 cut(s) | 285, 390, 509, 813, 1685, 1902 |
| BseNI | ACTGG | 2 cut(s) | 1261, 1513 |
| BsePI | GCGCGC | 1 cut(s) | 307 |
| BseRI | GAGGAG | 3 cut(s) | 148, 491, 689 |
| BseSI | GKGCMC | 2 cut(s) | 1087, 1486 |
| Bsh1236I | CGCG | 1 cut(s) | 309 |
| Bsh1285I | CGRYCG | 1 cut(s) | 219 |
| BshFI | GGCC | 5 cut(s) | 5, 102, 467, 1130, 1385 |
| BsiEI | CGRYCG | 1 cut(s) | 219 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1486 |
| BsiSI | CCGG | 1 cut(s) | 219 |
| BslFI | GGGAC | 3 cut(s) | 809, 1023, 1539 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 221, 601, 1058, 1256, 1522, 1616, 1840 |
| BsmAI | GTCTC | 2 cut(s) | 380, 593 |
| BsmBI | CGTCTC | 1 cut(s) | 593 |
| BsmFI | GGGAC | 3 cut(s) | 809, 1023, 1539 |
| BsnI | GGCC | 5 cut(s) | 5, 102, 467, 1130, 1385 |
| Bsp1286I | GDGCHC | 4 cut(s) | 30, 763, 1087, 1486 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1911 |
| BspANI | GGCC | 5 cut(s) | 5, 102, 467, 1130, 1385 |
| BspCNI | CTCAG | 6 cut(s) | 286, 391, 508, 814, 1684, 1903 |
| BspFNI | CGCG | 1 cut(s) | 309 |
| BspLI | GGNNCC | 3 cut(s) | 593, 797, 1703 |
| BspMAI | CTGCAG | 1 cut(s) | 949 |
| BspMI | ACCTGC | 2 cut(s) | 807, 938 |
| BspOI | GCTAGC | 1 cut(s) | 494 |
| BspPI | GGATC | 2 cut(s) | 284, 1865 |
| BspQI | GCTCTTC | 1 cut(s) | 1241 |
| BsrBI | CCGCTC | 1 cut(s) | 1447 |
| BsrDI | GCAATG | 2 cut(s) | 262, 1665 |
| BsrI | ACTGG | 2 cut(s) | 1261, 1513 |
| BssECI | CCNNGG | 6 cut(s) | 39, 266, 1052, 1346, 1521, 1616 |
| BssHII | GCGCGC | 1 cut(s) | 307 |
| BssT1I | CCWWGG | 3 cut(s) | 1052, 1346, 1521 |
| Bst2UI | CCWGG | 3 cut(s) | 268, 1251, 1617 |
| Bst4CI | ACNGT | 5 cut(s) | 86, 373, 604, 1221, 1553 |
| Bst6I | CTCTTC | 6 cut(s) | 130, 378, 548, 1164, 1241, 1617 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 416, 1405 |
| BstBAI | YACGTR | 1 cut(s) | 994 |
| BstC8I | GCNNGC | 7 cut(s) | 283, 309, 396, 492, 1445, 1828, 1865 |
| BstDEI | CTNAG | 8 cut(s) | 294, 315, 399, 495, 822, 1185, 1671, 1911 |
| BstDSI | CCRYGG | 1 cut(s) | 39 |
| BstEII | GGTNACC | 1 cut(s) | 1511 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1056 |
| BstF5I | GGATG | 4 cut(s) | 544, 564, 1333, 1830 |
| BstFNI | CGCG | 1 cut(s) | 309 |
| BstHHI | GCGC | 3 cut(s) | 187, 309, 311 |
| BstMAI | GTCTC | 2 cut(s) | 380, 593 |
| BstMCI | CGRYCG | 1 cut(s) | 219 |
| BstNI | CCWGG | 3 cut(s) | 268, 1251, 1617 |
| BstNSI | RCATGY | 1 cut(s) | 1234 |
| BstPI | GGTNACC | 1 cut(s) | 1511 |
| BstSCI | CCNGG | 3 cut(s) | 266, 1249, 1615 |
| BstSFI | CTRYAG | 1 cut(s) | 945 |
| BstSLI | GKGCMC | 2 cut(s) | 1087, 1486 |
| BstUI | CGCG | 1 cut(s) | 309 |
| BstX2I | RGATCY | 1 cut(s) | 1691 |
| BstYI | RGATCY | 1 cut(s) | 1691 |
| BsuI | GTATCC | 1 cut(s) | 448 |
| BsuRI | GGCC | 5 cut(s) | 5, 102, 467, 1130, 1385 |
| BtgI | CCRYGG | 1 cut(s) | 39 |
| BtsCI | GGATG | 4 cut(s) | 544, 564, 1333, 1830 |
| BtsIMutI | CAGTG | 1 cut(s) | 1506 |
| BveI | ACCTGC | 2 cut(s) | 807, 938 |
| Cac8I | GCNNGC | 7 cut(s) | 283, 309, 396, 492, 1445, 1828, 1865 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1256, 1405 |
| CfoI | GCGC | 3 cut(s) | 187, 309, 311 |
| Cfr13I | GGNCC | 5 cut(s) | 101, 796, 1244, 1343, 1383 |
| CseI | GACGC | 1 cut(s) | 668 |
| Csp6I | GTAC | 1 cut(s) | 1663 |
| CviAII | CATG | 3 cut(s) | 380, 1231, 1367 |
| CviQI | GTAC | 1 cut(s) | 1663 |
| DdeI | CTNAG | 8 cut(s) | 294, 315, 399, 495, 822, 1185, 1671, 1911 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 6 cut(s) | 130, 378, 548, 1164, 1241, 1617 |
| EarI | CTCTTC | 6 cut(s) | 130, 378, 548, 1164, 1241, 1617 |
| EciI | GGCGGA | 2 cut(s) | 40, 186 |
| Eco130I | CCWWGG | 3 cut(s) | 1052, 1346, 1521 |
| Eco147I | AGGCCT | 1 cut(s) | 1130 |
| Eco24I | GRGCYC | 2 cut(s) | 30, 763 |
| Eco32I | GATATC | 1 cut(s) | 667 |
| Eco47I | GGWCC | 3 cut(s) | 796, 1244, 1343 |
| Eco57I | CTGAAG | 3 cut(s) | 468, 1145, 1809 |
| Eco91I | GGTNACC | 1 cut(s) | 1511 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1056 |
| EcoO109I | RGGNCCY | 1 cut(s) | 796 |
| EcoO65I | GGTNACC | 1 cut(s) | 1511 |
| EcoRI | GAATTC | 1 cut(s) | 1604 |
| EcoRII | CCWGG | 3 cut(s) | 266, 1249, 1615 |
| EcoRV | GATATC | 1 cut(s) | 667 |
| EcoT14I | CCWWGG | 3 cut(s) | 1052, 1346, 1521 |
| EcoT22I | ATGCAT | 1 cut(s) | 1435 |
| EcoT38I | GRGCYC | 2 cut(s) | 30, 763 |
| ErhI | CCWWGG | 3 cut(s) | 1052, 1346, 1521 |
| Esp3I | CGTCTC | 1 cut(s) | 593 |
| FaeI | CATG | 3 cut(s) | 383, 1234, 1370 |
| FaqI | GGGAC | 3 cut(s) | 809, 1023, 1539 |
| FatI | CATG | 3 cut(s) | 379, 1230, 1366 |
| FauI | CCCGC | 2 cut(s) | 1564, 1856 |
| FbaI | TGATCA | 3 cut(s) | 259, 862, 1023 |
| FblI | GTMKAC | 2 cut(s) | 682, 1896 |
| FokI | GGATG | 4 cut(s) | 551, 571, 1340, 1817 |
| FriOI | GRGCYC | 2 cut(s) | 30, 763 |
| FspBI | CTAG | 6 cut(s) | 345, 491, 528, 710, 911, 1275 |
| GlaI | GCGC | 3 cut(s) | 186, 308, 310 |
| GsuI | CTGGAG | 4 cut(s) | 323, 656, 1233, 1962 |
| HaeIII | GGCC | 5 cut(s) | 5, 102, 467, 1130, 1385 |
| HapII | CCGG | 1 cut(s) | 219 |
| HgaI | GACGC | 1 cut(s) | 668 |
| HhaI | GCGC | 3 cut(s) | 187, 309, 311 |
| Hin1II | CATG | 3 cut(s) | 383, 1234, 1370 |
| Hin6I | GCGC | 3 cut(s) | 185, 307, 309 |
| HinP1I | GCGC | 3 cut(s) | 185, 307, 309 |
| HincII | GTYRAC | 3 cut(s) | 650, 683, 1752 |
| HindII | GTYRAC | 3 cut(s) | 650, 683, 1752 |
| HinfI | GANTC | 5 cut(s) | 620, 889, 1031, 1170, 1568 |
| HpaII | CCGG | 1 cut(s) | 219 |
| HphI | GGTGA | 5 cut(s) | 25, 385, 991, 1148, 1523 |
| Hpy166II | GTNNAC | 6 cut(s) | 650, 683, 955, 1484, 1752, 1897 |
| Hpy188I | TCNGA | 9 cut(s) | 365, 706, 894, 903, 1028, 1164, 1226, 1290, 1769 |
| Hpy188III | TCNNGA | 8 cut(s) | 293, 302, 536, 1059, 1296, 1565, 1655, 1886 |
| Hpy8I | GTNNAC | 6 cut(s) | 650, 683, 955, 1484, 1752, 1897 |
| Hpy99I | CGWCG | 3 cut(s) | 101, 684, 687 |
| HpyCH4III | ACNGT | 5 cut(s) | 86, 373, 604, 1221, 1553 |
| HpyCH4IV | ACGT | 2 cut(s) | 993, 1072 |
| HpyCH4V | TGCA | 7 cut(s) | 431, 692, 749, 947, 1433, 1484, 1937 |
| HpyF3I | CTNAG | 8 cut(s) | 294, 315, 399, 495, 822, 1185, 1671, 1911 |
| HpySE526I | ACGT | 2 cut(s) | 993, 1072 |
| Hsp92II | CATG | 3 cut(s) | 383, 1234, 1370 |
| HspAI | GCGC | 3 cut(s) | 185, 307, 309 |
| Ksp22I | TGATCA | 3 cut(s) | 259, 862, 1023 |
| LguI | GCTCTTC | 1 cut(s) | 1241 |
| LmnI | GCTCC | 9 cut(s) | 180, 304, 365, 478, 637, 676, 697, 987, 1339 |
| LweI | GCATC | 4 cut(s) | 736, 1420, 1839, 1924 |
| MaeI | CTAG | 6 cut(s) | 345, 491, 528, 710, 911, 1275 |
| MaeII | ACGT | 2 cut(s) | 993, 1072 |
| MaeIII | GTNAC | 4 cut(s) | 931, 1354, 1392, 1511 |
| MbiI | CCGCTC | 1 cut(s) | 1447 |
| MflI | RGATCY | 1 cut(s) | 1691 |
| MhlI | GDGCHC | 4 cut(s) | 30, 763, 1087, 1486 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 7 cut(s) | 514, 542, 721, 1604, 1646, 1708, 1931 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 1040 |
| MmeI | TCCRAC | 2 cut(s) | 105, 303 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 1 cut(s) | 1435 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 2 cut(s) | 1635, 1716 |
| MslI | CAYNNNNRTG | 2 cut(s) | 38, 1438 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 5 cut(s) | 281, 1559, 1574, 1778, 1940 |
| MspI | CCGG | 1 cut(s) | 219 |
| MspR9I | CCNGG | 3 cut(s) | 268, 1251, 1617 |
| MvaI | CCWGG | 3 cut(s) | 268, 1251, 1617 |
| MvnI | CGCG | 1 cut(s) | 309 |
| NheI | GCTAGC | 1 cut(s) | 490 |
| NlaIII | CATG | 3 cut(s) | 383, 1234, 1370 |
| NlaIV | GGNNCC | 3 cut(s) | 593, 797, 1703 |
| NmuCI | GTSAC | 2 cut(s) | 1392, 1511 |
| NsiI | ATGCAT | 1 cut(s) | 1435 |
| NspI | RCATGY | 1 cut(s) | 1234 |
| OliI | CACNNNNGTG | 1 cut(s) | 38 |
| PaqCI | CACCTGC | 1 cut(s) | 938 |
| PauI | GCGCGC | 1 cut(s) | 307 |
| PceI | AGGCCT | 1 cut(s) | 1130 |
| PciSI | GCTCTTC | 1 cut(s) | 1241 |
| PfeI | GAWTC | 4 cut(s) | 620, 889, 1170, 1568 |
| PflFI | GACNNNGTC | 1 cut(s) | 1529 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1256 |
| PfoI | TCCNGGA | 1 cut(s) | 1249 |
| PleI | GAGTC | 1 cut(s) | 1039 |
| PpsI | GAGTC | 1 cut(s) | 1039 |
| Ppu21I | YACGTR | 1 cut(s) | 994 |
| PpuMI | RGGWCCY | 1 cut(s) | 796 |
| Psp5II | RGGWCCY | 1 cut(s) | 796 |
| Psp6I | CCWGG | 3 cut(s) | 266, 1249, 1615 |
| PspEI | GGTNACC | 1 cut(s) | 1511 |
| PspGI | CCWGG | 3 cut(s) | 266, 1249, 1615 |
| PspN4I | GGNNCC | 3 cut(s) | 593, 797, 1703 |
| PspPI | GGNCC | 5 cut(s) | 101, 796, 1244, 1343, 1383 |
| PspPPI | RGGWCCY | 1 cut(s) | 796 |
| PstI | CTGCAG | 1 cut(s) | 949 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1256, 1405 |
| PsuI | RGATCY | 1 cut(s) | 1691 |
| PsyI | GACNNNGTC | 1 cut(s) | 1529 |
| PteI | GCGCGC | 1 cut(s) | 307 |
| PvuII | CAGCTG | 2 cut(s) | 1574, 1940 |
| RsaI | GTAC | 1 cut(s) | 1664 |
| RsaNI | GTAC | 1 cut(s) | 1663 |
| RseI | CAYNNNNRTG | 2 cut(s) | 38, 1438 |
| SalI | GTCGAC | 1 cut(s) | 681 |
| SapI | GCTCTTC | 1 cut(s) | 1241 |
| SaqAI | TTAA | 2 cut(s) | 1635, 1716 |
| Sau96I | GGNCC | 5 cut(s) | 101, 796, 1244, 1343, 1383 |
| SchI | GAGTC | 1 cut(s) | 1040 |
| ScrFI | CCNGG | 3 cut(s) | 268, 1251, 1617 |
| SduI | GDGCHC | 4 cut(s) | 30, 763, 1087, 1486 |
| SfaNI | GCATC | 4 cut(s) | 736, 1420, 1839, 1924 |
| SfcI | CTRYAG | 1 cut(s) | 945 |
| SgrDI | CGTCGACG | 1 cut(s) | 681 |
| SinI | GGWCC | 3 cut(s) | 796, 1244, 1343 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 38, 1438 |
| SpeI | ACTAGT | 1 cut(s) | 910 |
| Sse9I | AATT | 7 cut(s) | 514, 542, 721, 1604, 1646, 1708, 1931 |
| SseBI | AGGCCT | 1 cut(s) | 1130 |
| SspI | AATATT | 1 cut(s) | 1005 |
| SspMI | CTAG | 6 cut(s) | 345, 491, 528, 710, 911, 1275 |
| StuI | AGGCCT | 1 cut(s) | 1130 |
| StyD4I | CCNGG | 3 cut(s) | 266, 1249, 1615 |
| StyI | CCWWGG | 3 cut(s) | 1052, 1346, 1521 |
| TaaI | ACNGT | 5 cut(s) | 86, 373, 604, 1221, 1553 |
| TaiI | ACGT | 2 cut(s) | 996, 1075 |
| TaqI | TCGA | 3 cut(s) | 288, 682, 1173 |
| TasI | AATT | 7 cut(s) | 514, 542, 721, 1604, 1646, 1708, 1931 |
| TatI | WGTACW | 1 cut(s) | 1662 |
| TauI | GCSGC | 3 cut(s) | 202, 281, 1781 |
| TfiI | GAWTC | 4 cut(s) | 620, 889, 1170, 1568 |
| Tru1I | TTAA | 2 cut(s) | 1635, 1716 |
| Tru9I | TTAA | 2 cut(s) | 1635, 1716 |
| TscAI | CASTG | 1 cut(s) | 1513 |
| TseFI | GTSAC | 2 cut(s) | 1392, 1511 |
| Tsp45I | GTSAC | 2 cut(s) | 1392, 1511 |
| TspDTI | ATGAA | 8 cut(s) | 396, 555, 582, 1405, 1437, 1608, 1671, 1757 |
| TspGWI | ACGGA | 2 cut(s) | 700, 1694 |
| TspRI | CASTG | 1 cut(s) | 1513 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1529 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1256 |
| VneI | GTGCAC | 1 cut(s) | 1482 |
| VpaK11BI | GGWCC | 3 cut(s) | 796, 1244, 1343 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1056 |
| XapI | RAATTY | 4 cut(s) | 514, 721, 1604, 1931 |
| XceI | RCATGY | 1 cut(s) | 1234 |
| XmiI | GTMKAC | 2 cut(s) | 682, 1896 |
| XspI | CTAG | 6 cut(s) | 345, 491, 528, 710, 911, 1275 |
| Zsp2I | ATGCAT | 1 cut(s) | 1435 |