AT5G17410

Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0014965
Physical Location & Seq
Forward (+)
5730569 .. 5736695
6127 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G17410.2

Sequence Viewer

Length: 2037 bp
ATGGAATCAATGACGCCAATCTCGTGCCCTACGACTCCTCGTTGGAACCAAGACAGACCATTTCTCACTGGTCGCTTCCATCAGGAAACGAGGGCAAGCTCCAAGTTTGCTGATTCTAAGAGGTTTACTTTAGACTCGTCTAGTTCTGGAGTAGAGCAGGCAATTGGCTGCTATGACACACCGGTTCAGGAGCTTATCGTCATTGATGATCTCTTATCTGCGTTGGTTGGAATTGAAGGGAGATATATTTCAATTAAAAGATTCCATGGGAAGGAGGATAGTATAGCTTTCCAAGTTGATCCATCAATGGATTTGGCACTACAGGAATTGGCGAAAAGAATATTTCCTTTATGTGAATATTATCTGCTGATTGACCAATTTGTGGAGTCAAGCTCGCAGTTCAAGAACGGGCTAGTTAACCATGCATTCGCGGCTGCACTCAGGGCACTCCTCCTTGATTATCAAGCCATGGTGGCACAATTGGAACATCAATTTCGACTTGGAAGACTTTCTATCCAAGGATTATGGTTTTACTGTCAGCCCATGATGGGATCCATGCGCGCATTGGCTGCAGTAATTCAGCAGGCTTCAACGAAGCAGTTTGTGGGTTCTGGTGTTCTTAATCTCTTGCAAAGTCAGGCTAAAGCGATGGCTGGTGATAATTCAGTGAGGTCATTGTTAGAGAAAATGACGGAGTGTGCAAGCAACGCATACCTAAGCATATTGGAAAGGTGGGTCTATGAAGGGATCATTGATGATCCGTATGGGGAATTTTTCATTGCCGAGAACAGGTCTCTCAAAAAGGAGAGCCTCAGTCAGGACTCTACAGCTAAATATTGGAGCCAAAGATACAGCCTTAAGGATACTATTCCTGGCTTCCTAGCAAACATTGCTGCAACAATATTGACCACAGGGAAATATCTAAACGTTATGAGAGAATGTGGGCACAATGTTCAGGTTCCCATATCAGAGAGATCTAAGTTAACAATATTTGGGTCAAATCATCATTATCTTGAATGCATAAAGGCTGCTCACGAATTTGCCAGTATAGAGCTTGTGAATCTCATCAAGGATAAGTATGACCTTGTTGGAAGGCTTCGATCTATAAAGCACTATCTTCTTCTCGACCAGGGTGATTTCTTGGTTCATTTTATGGACATTGCTCGAGAGGAGCTCAACAAAAAAGTGCATGAAATATCTGTTGAAAAGTTGCAGTCTTTGCTAGATCTTGCTCTACGTACCACAGCGGCTGCAGCAGATCCTCGTCACGAAGACTTGACTTGTTGTGTGGATCGAGCTTCATTGCTTACGACTTTGGGAATGCACAAGGACACTGATAGCAATAGTATTGAGGACCCAATGAGCATCACTGGTCTAGAGACATTTTCCTTGAGCTACAAGGTTCAATGGCCACTATCTATTGTCATATCAAAGAAAGCATTGTCAAAGTACCAGTTAATTTTCCGCTTTCTTTTTCATTGCAAACATGTGGAACGCCAGCTTTGTGGTGCTTGGCAGATACATCAAGGGATTCGGTCTATGAACTCTAAGGGTACAGCAATTCTTAGATCATCGCTTCTCTGCCGTAGCATGCTTAAATTCATCAGTAGCCTTCTACATTATCTTACATTCGAGGTTCTCGAACCAAATTGGCATGTAATGCACGATAGACTACAATCCACAAGGAGTGTAGATGAGGTGATACAACATCACGACTTTTTTCTTGATAAATGTCTGAGAGGATGCTTGCTTCTTTTACCTGACGTCCTTAAGAAAATGGAGAAGTTGAAATCAGTGTGTCTGCAATATGCTGCAGCCACACAGTGGTTGATATCATCGTCTATCGACATCAATAGCCAGTCTCATCCACAGAAGACAATGATAAGAGACACAACCGTTACAGAGTCCATATTCAATTTCGAAAGGGAGTTCAACTCGGAGTTGCAGAGCTTAGGACCAGTCTTGAGCAAAGGCTCCCAGGCTGAGCCATACTTGACTCATCTCTCCCAGTGGATCCTTGGTGTTTCGAAAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005815 GO:0005856 GO:0005874 GO:0005881 GO:0005938 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0007275 GO:0008092 GO:0008104 GO:0008150 GO:0008275 GO:0009987 GO:0010638 GO:0010968 GO:0012505 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022607 GO:0030863 GO:0030981 GO:0031109 GO:0031110 GO:0031112 GO:0031113 GO:0031116 GO:0031122 GO:0031334 GO:0031503 GO:0031967 GO:0031975 GO:0032153 GO:0032155 GO:0032271 GO:0032273 GO:0032501 GO:0032502 GO:0032886 GO:0032991 GO:0033036 GO:0033043 GO:0033566 GO:0034613 GO:0034622 GO:0034629 GO:0043015 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044450 GO:0044464 GO:0046785 GO:0048229 GO:0048285 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051179 GO:0051225 GO:0051258 GO:0051321 GO:0051415 GO:0051418 GO:0051493 GO:0051495 GO:0051641 GO:0055028 GO:0065003 GO:0065007 GO:0070507 GO:0070727 GO:0070925 GO:0071840 GO:0071944 GO:0090063 GO:0090307 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:0140014 GO:1902850 GO:1902903 GO:1902905 GO:1903047
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Spc97_Spc98

Protein Analysis

678

Amino Acids

76.94

Weight (kDa)

6.77

Isoelectric Point (pI)

48.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GCP_N_terminal PF17681 69 - 360 1e-76 Gamma tubulin complex component N-terminal
GCP_C_terminal PF04130 363 - 669 2.8e-68 Gamma tubulin complex component C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014965)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G17410 AT5G17410
fragaria_vesca FvH4_6g00120
malus_domestica MD14G1089300.v1.1
prunus_persica Prupe.7G036600_v2.0.a1 Prupe.7G036600_v2.0.a1
pyrus_communis pycom14g07880
rosa_chinensis RchiOBHm_Chr3g0447481
rosa_laevigata RLG00000025994
rosa_roxburghii Rroxscaffold_6G00425700
rosa_rugosa Rorug02G0602200
rosa_samantha Rh3AG002400 Rh3BG001900 Rh3CG002200 Rh3DG002300
rosa_wichuraiana Rw3G000130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1767
AccB7I CCANNNNNTGG 2 cut(s) 382, 1824
AccII CGCG 2 cut(s) 431, 561
AciI CCGC 3 cut(s) 431, 1247, 1465
AclI AACGTT 1 cut(s) 927
AclWI GGATC 9 cut(s) 293, 546, 559, 752, 755, 1253, 1299, 2008, 2021
AcoI YGGCCR 1 cut(s) 1409
AcsI RAATTY 3 cut(s) 770, 1037, 1598
AcyI GRCGYC 2 cut(s) 14, 1764
AdeI CACNNNGTG 1 cut(s) 1824
AfaI GTAC 3 cut(s) 1240, 1451, 1555
AfiI CCNNNNNNNGG 6 cut(s) 271, 382, 548, 789, 817, 1824
AflII CTTAAG 2 cut(s) 857, 1769
AflIII ACRYGT 1 cut(s) 1486
AgeI ACCGGT 1 cut(s) 181
AjnI CCWGG 3 cut(s) 871, 1128, 1977
Alw21I GWGCWC 1 cut(s) 1176
Alw26I GTCTC 4 cut(s) 798, 1373, 1866, 1881
AlwI GGATC 9 cut(s) 293, 546, 559, 752, 755, 1253, 1299, 2008, 2021
AlwNI CAGNNNCTG 1 cut(s) 1250
Ama87I CYCGRG 1 cut(s) 1164
AoxI GGCC 1 cut(s) 1409
ApeKI GCWGC 9 cut(s) 168, 434, 569, 893, 1028, 1250, 1253, 1811, 1814
ApoI RAATTY 3 cut(s) 770, 1037, 1598
AsiGI ACCGGT 1 cut(s) 181
Asp700I GAANNNNTTC 1 cut(s) 508
AspLEI GCGC 2 cut(s) 561, 563
AspS9I GGNCC 2 cut(s) 1354, 1955
AsuHPI GGTGA 3 cut(s) 668, 1145, 1711
AsuII TTCGAA 2 cut(s) 1920, 2027
AvaI CYCGRG 1 cut(s) 1164
AvaII GGWCC 2 cut(s) 1354, 1955
BaeGI GKGCMC 3 cut(s) 29, 448, 948
BalI TGGCCA 1 cut(s) 1411
BamHI GGATCC 2 cut(s) 551, 2013
BanII GRGCYC 1 cut(s) 1176
BauI CACGAG 1 cut(s) 22
BbsI GAAGAC 3 cut(s) 511, 1278, 1880
Bbv12I GWGCWC 1 cut(s) 1176
BbvI GCAGC 9 cut(s) 155, 421, 556, 880, 1015, 1237, 1265, 1798, 1826
BccI CCATC 4 cut(s) 87, 310, 541, 643
BceAI ACGGC 1 cut(s) 1569
BciT130I CCWGG 3 cut(s) 873, 1130, 1979
BciVI GTATCC 1 cut(s) 856
BcoDI GTCTC 4 cut(s) 798, 1373, 1866, 1881
BfaI CTAG 5 cut(s) 141, 413, 881, 1223, 1376
BfmI CTRYAG 5 cut(s) 320, 570, 825, 1251, 1812
BfrI CTTAAG 2 cut(s) 857, 1769
BfuI GTATCC 1 cut(s) 856
BglI GCCNNNNNGGC 1 cut(s) 473
BglII AGATCT 2 cut(s) 974, 1225
BlpI GCTNAGC 1 cut(s) 1983
Bme1390I CCNGG 3 cut(s) 873, 1130, 1979
Bme18I GGWCC 2 cut(s) 1354, 1955
BmeT110I CYCGRG 1 cut(s) 1164
BmgT120I GGNCC 2 cut(s) 1354, 1955
BmiI GGNNCC 7 cut(s) 47, 553, 842, 960, 1356, 1975, 2015
BmrFI CCNGG 3 cut(s) 873, 1130, 1979
BmrI ACTGGG 1 cut(s) 2002
BmsI GCATC 2 cut(s) 1374, 1733
BmuI ACTGGG 1 cut(s) 2002
BpiI GAAGAC 3 cut(s) 511, 1278, 1880
BplI GAGNNNNNCTC 6 cut(s) 377, 409, 1158, 1190, 1919, 1951
BpmI CTGGAG 1 cut(s) 168
Bpu10I CCTNAGC 2 cut(s) 716, 1951
Bpu1102I GCTNAGC 1 cut(s) 1983
Bpu14I TTCGAA 2 cut(s) 1920, 2027
BpuEI CTTGAG 2 cut(s) 1411, 1984
BsaAI YACGTR 1 cut(s) 1238
BsaHI GRCGYC 2 cut(s) 14, 1764
BsaI GGTCTC 1 cut(s) 798
BsaJI CCNNGG 6 cut(s) 265, 468, 517, 1129, 1977, 2017
BsaWI WCCGGW 1 cut(s) 181
Bsc4I CCNNNNNNNGG 6 cut(s) 271, 382, 548, 789, 817, 1824
Bse118I RCCGGY 1 cut(s) 181
Bse1I ACTGG 7 cut(s) 73, 1044, 1375, 1453, 1858, 1958, 2008
Bse3DI GCAATG 5 cut(s) 777, 888, 1158, 1301, 1477
BseBI CCWGG 3 cut(s) 873, 1130, 1979
BseDI CCNNGG 6 cut(s) 265, 468, 517, 1129, 1977, 2017
BseGI GGATG 2 cut(s) 1748, 1864
BseLI CCNNNNNNNGG 6 cut(s) 271, 382, 548, 789, 817, 1824
BseMI GCAATG 5 cut(s) 777, 888, 1158, 1301, 1477
BseMII CTCAG 4 cut(s) 454, 826, 1727, 1974
BseNI ACTGG 7 cut(s) 73, 1044, 1375, 1453, 1858, 1958, 2008
BsePI GCGCGC 1 cut(s) 559
BseRI GAGGAG 3 cut(s) 27, 440, 1184
BseSI GKGCMC 3 cut(s) 29, 448, 948
BseXI GCAGC 9 cut(s) 155, 421, 556, 880, 1015, 1237, 1265, 1798, 1826
BsgI GTGCAG 1 cut(s) 420
Bsh1236I CGCG 2 cut(s) 431, 561
BshFI GGCC 1 cut(s) 1411
BshTI ACCGGT 1 cut(s) 181
BsiHKAI GWGCWC 1 cut(s) 1176
BsiHKCI CYCGRG 1 cut(s) 1164
BsiSI CCGG 1 cut(s) 182
BslI CCNNNNNNNGG 6 cut(s) 271, 382, 548, 789, 817, 1824
BsmAI GTCTC 4 cut(s) 798, 1373, 1866, 1881
BsmI GAATGC 3 cut(s) 425, 1022, 1326
BsnI GGCC 1 cut(s) 1411
Bso31I GGTCTC 1 cut(s) 798
BsoBI CYCGRG 1 cut(s) 1164
Bsp119I TTCGAA 2 cut(s) 1920, 2027
Bsp1286I GDGCHC 4 cut(s) 29, 448, 948, 1176
Bsp1720I GCTNAGC 1 cut(s) 1983
Bsp19I CCATGG 2 cut(s) 265, 468
BspACI CCGC 3 cut(s) 431, 1247, 1465
BspANI GGCC 1 cut(s) 1411
BspCNI CTCAG 4 cut(s) 453, 825, 1728, 1975
BspFNI CGCG 2 cut(s) 431, 561
BspLI GGNNCC 7 cut(s) 47, 553, 842, 960, 1356, 1975, 2015
BspMAI CTGCAG 3 cut(s) 574, 1255, 1816
BspPI GGATC 9 cut(s) 293, 546, 559, 752, 755, 1253, 1299, 2008, 2021
BspT104I TTCGAA 2 cut(s) 1920, 2027
BspTI CTTAAG 2 cut(s) 857, 1769
BspTNI GGTCTC 1 cut(s) 798
BsrDI GCAATG 5 cut(s) 777, 888, 1158, 1301, 1477
BsrFI RCCGGY 1 cut(s) 181
BsrI ACTGG 7 cut(s) 73, 1044, 1375, 1453, 1858, 1958, 2008
BssAI RCCGGY 1 cut(s) 181
BssECI CCNNGG 6 cut(s) 265, 468, 517, 1129, 1977, 2017
BssHII GCGCGC 1 cut(s) 559
BssNI GRCGYC 2 cut(s) 14, 1764
BssSI CACGAG 1 cut(s) 22
BssT1I CCWWGG 4 cut(s) 265, 468, 517, 2017
Bst2BI CACGAG 1 cut(s) 22
Bst2UI CCWGG 3 cut(s) 873, 1130, 1979
Bst4CI ACNGT 3 cut(s) 536, 1824, 1897
BstACI GRCGYC 2 cut(s) 14, 1764
BstAFI CTTAAG 2 cut(s) 857, 1769
BstAPI GCANNNNNTGC 4 cut(s) 569, 890, 1219, 1660
BstBAI YACGTR 1 cut(s) 1238
BstBI TTCGAA 2 cut(s) 1920, 2027
BstC8I GCNNGC 9 cut(s) 97, 159, 395, 561, 585, 703, 1499, 1592, 1748
BstDSI CCRYGG 2 cut(s) 265, 468
BstENI CCTNNNNNAGG 1 cut(s) 815
BstF5I GGATG 2 cut(s) 1748, 1864
BstFNI CGCG 2 cut(s) 431, 561
BstHHI GCGC 2 cut(s) 561, 563
BstMAI GTCTC 4 cut(s) 798, 1373, 1866, 1881
BstMWI GCNNNNNNNGC 9 cut(s) 431, 443, 473, 569, 707, 890, 1219, 1253, 1660
BstNI CCWGG 3 cut(s) 873, 1130, 1979
BstNSI RCATGY 3 cut(s) 1490, 1594, 1658
BstSCI CCNGG 3 cut(s) 871, 1128, 1977
BstSFI CTRYAG 5 cut(s) 320, 570, 825, 1251, 1812
BstSLI GKGCMC 3 cut(s) 29, 448, 948
BstSNI TACGTA 1 cut(s) 1238
BstUI CGCG 2 cut(s) 431, 561
BstV1I GCAGC 9 cut(s) 155, 421, 556, 880, 1015, 1237, 1265, 1798, 1826
BstV2I GAAGAC 3 cut(s) 511, 1278, 1880
BstX2I RGATCY 5 cut(s) 551, 974, 1225, 1258, 2013
BstXI CCANNNNNNTGG 1 cut(s) 1505
BstYI RGATCY 5 cut(s) 551, 974, 1225, 1258, 2013
BsuI GTATCC 1 cut(s) 856
BsuRI GGCC 1 cut(s) 1411
BtgI CCRYGG 2 cut(s) 265, 468
BtgZI GCGATG 2 cut(s) 662, 1557
BtsCI GGATG 2 cut(s) 1748, 1864
BtsIMutI CAGTG 7 cut(s) 66, 672, 1332, 1368, 1800, 1829, 2015
Cac8I GCNNGC 9 cut(s) 97, 159, 395, 561, 585, 703, 1499, 1592, 1748
CaiI CAGNNNCTG 1 cut(s) 1250
CfoI GCGC 2 cut(s) 561, 563
Cfr10I RCCGGY 1 cut(s) 181
Cfr13I GGNCC 2 cut(s) 1354, 1955
CseI GACGC 1 cut(s) 22
Csp6I GTAC 3 cut(s) 1239, 1450, 1554
CspAI ACCGGT 1 cut(s) 181
CviAII CATG 9 cut(s) 266, 422, 469, 544, 556, 1190, 1487, 1591, 1655
CviQI GTAC 3 cut(s) 1239, 1450, 1554
DraIII CACNNNGTG 1 cut(s) 1824
EaeI YGGCCR 1 cut(s) 1409
Ecl136II GAGCTC 1 cut(s) 1174
Eco105I TACGTA 1 cut(s) 1238
Eco130I CCWWGG 4 cut(s) 265, 468, 517, 2017
Eco24I GRGCYC 1 cut(s) 1176
Eco31I GGTCTC 1 cut(s) 798
Eco32I GATATC 1 cut(s) 1833
Eco47I GGWCC 2 cut(s) 1354, 1955
Eco53kI GAGCTC 1 cut(s) 1174
Eco88I CYCGRG 1 cut(s) 1164
EcoICRI GAGCTC 1 cut(s) 1174
EcoNI CCTNNNNNAGG 1 cut(s) 815
EcoO109I RGGNCCY 1 cut(s) 1354
EcoRII CCWGG 3 cut(s) 871, 1128, 1977
EcoRV GATATC 1 cut(s) 1833
EcoT14I CCWWGG 4 cut(s) 265, 468, 517, 2017
EcoT22I ATGCAT 2 cut(s) 427, 1022
EcoT38I GRGCYC 1 cut(s) 1176
ErhI CCWWGG 4 cut(s) 265, 468, 517, 2017
FaeI CATG 9 cut(s) 269, 425, 472, 547, 559, 1193, 1490, 1594, 1658
FatI CATG 9 cut(s) 265, 421, 468, 543, 555, 1189, 1486, 1590, 1654
FokI GGATG 2 cut(s) 1755, 1851
FriOI GRGCYC 1 cut(s) 1176
FspBI CTAG 5 cut(s) 141, 413, 881, 1223, 1376
GlaI GCGC 2 cut(s) 560, 562
GsuI CTGGAG 1 cut(s) 168
HaeIII GGCC 1 cut(s) 1411
HapII CCGG 1 cut(s) 182
HgaI GACGC 1 cut(s) 22
HhaI GCGC 2 cut(s) 561, 563
Hin1I GRCGYC 2 cut(s) 14, 1764
Hin1II CATG 9 cut(s) 269, 425, 472, 547, 559, 1193, 1490, 1594, 1658
Hin6I GCGC 2 cut(s) 559, 561
HinP1I GCGC 2 cut(s) 559, 561
HincII GTYRAC 2 cut(s) 418, 984
HindII GTYRAC 2 cut(s) 418, 984
HpaI GTTAAC 2 cut(s) 418, 984
HpaII CCGG 1 cut(s) 182
HphI GGTGA 3 cut(s) 668, 1145, 1711
Hpy166II GTNNAC 3 cut(s) 126, 418, 984
Hpy188I TCNGA 3 cut(s) 970, 1737, 1939
Hpy8I GTNNAC 3 cut(s) 126, 418, 984
HpyAV CCTTC 5 cut(s) 230, 265, 737, 1086, 1622
HpyCH4III ACNGT 3 cut(s) 536, 1824, 1897
HpyCH4IV ACGT 3 cut(s) 927, 1237, 1764
HpyF10VI GCNNNNNNNGC 9 cut(s) 431, 443, 473, 569, 707, 890, 1219, 1253, 1660
HpySE526I ACGT 3 cut(s) 927, 1237, 1764
Hsp92I GRCGYC 2 cut(s) 14, 1764
Hsp92II CATG 9 cut(s) 269, 425, 472, 547, 559, 1193, 1490, 1594, 1658
HspAI GCGC 2 cut(s) 559, 561
KspAI GTTAAC 2 cut(s) 418, 984
LmnI GCTCC 5 cut(s) 104, 190, 840, 1171, 1979
Lsp1109I GCAGC 9 cut(s) 155, 421, 556, 880, 1015, 1237, 1265, 1798, 1826
LweI GCATC 2 cut(s) 1374, 1733
MaeI CTAG 5 cut(s) 141, 413, 881, 1223, 1376
MaeII ACGT 3 cut(s) 927, 1237, 1764
MaeIII GTNAC 2 cut(s) 1265, 1897
MboII GAAGA 5 cut(s) 516, 1109, 1112, 1283, 1885
MfeI CAATTG 2 cut(s) 162, 479
MflI RGATCY 5 cut(s) 551, 974, 1225, 1258, 2013
MhlI GDGCHC 4 cut(s) 29, 448, 948, 1176
MlsI TGGCCA 1 cut(s) 1411
MluNI TGGCCA 1 cut(s) 1411
MlyI GAGTC 6 cut(s) 28, 128, 395, 815, 1913, 1990
MmeI TCCRAC 3 cut(s) 23, 208, 1069
Mox20I TGGCCA 1 cut(s) 1411
Mph1103I ATGCAT 2 cut(s) 427, 1022
MroXI GAANNNNTTC 1 cut(s) 508
MscI TGGCCA 1 cut(s) 1411
MseI TTAA 8 cut(s) 255, 417, 621, 858, 983, 1457, 1596, 1770
Msp20I TGGCCA 1 cut(s) 1411
MspA1I CMGCKG 1 cut(s) 1247
MspCI CTTAAG 2 cut(s) 857, 1769
MspI CCGG 1 cut(s) 182
MspR9I CCNGG 3 cut(s) 873, 1130, 1979
MunI CAATTG 2 cut(s) 162, 479
Mva1269I GAATGC 3 cut(s) 425, 1022, 1326
MvaI CCWGG 3 cut(s) 873, 1130, 1979
MvnI CGCG 2 cut(s) 431, 561
MwoI GCNNNNNNNGC 9 cut(s) 431, 443, 473, 569, 707, 890, 1219, 1253, 1660
NcoI CCATGG 2 cut(s) 265, 468
NlaIII CATG 9 cut(s) 269, 425, 472, 547, 559, 1193, 1490, 1594, 1658
NlaIV GGNNCC 7 cut(s) 47, 553, 842, 960, 1356, 1975, 2015
NmeAIII GCCGAG 1 cut(s) 808
NmuCI GTSAC 1 cut(s) 1265
NsiI ATGCAT 2 cut(s) 427, 1022
NspI RCATGY 3 cut(s) 1490, 1594, 1658
NspV TTCGAA 2 cut(s) 1920, 2027
PaeI GCATGC 1 cut(s) 1594
PaeR7I CTCGAG 1 cut(s) 1164
PauI GCGCGC 1 cut(s) 559
PciI ACATGT 1 cut(s) 1486
PcsI WCGNNNNNNNCGW 3 cut(s) 20, 29, 1638
PctI GAATGC 3 cut(s) 425, 1022, 1326
PdmI GAANNNNTTC 1 cut(s) 508
PfeI GAWTC 5 cut(s) 5, 113, 261, 1060, 1531
PflMI CCANNNNNTGG 2 cut(s) 382, 1824
PinAI ACCGGT 1 cut(s) 181
PleI GAGTC 6 cut(s) 28, 128, 394, 815, 1912, 1990
PpsI GAGTC 6 cut(s) 28, 128, 394, 815, 1912, 1990
Ppu21I YACGTR 1 cut(s) 1238
PpuMI RGGWCCY 1 cut(s) 1354
PscI ACATGT 1 cut(s) 1486
Psp124BI GAGCTC 1 cut(s) 1176
Psp1406I AACGTT 1 cut(s) 927
Psp5II RGGWCCY 1 cut(s) 1354
Psp6I CCWGG 3 cut(s) 871, 1128, 1977
PspGI CCWGG 3 cut(s) 871, 1128, 1977
PspN4I GGNNCC 7 cut(s) 47, 553, 842, 960, 1356, 1975, 2015
PspPI GGNCC 2 cut(s) 1354, 1955
PspPPI RGGWCCY 1 cut(s) 1354
PstI CTGCAG 3 cut(s) 574, 1255, 1816
PstNI CAGNNNCTG 1 cut(s) 1250
PsuI RGATCY 5 cut(s) 551, 974, 1225, 1258, 2013
PteI GCGCGC 1 cut(s) 559
RsaI GTAC 3 cut(s) 1240, 1451, 1555
RsaNI GTAC 3 cut(s) 1239, 1450, 1554
SacI GAGCTC 1 cut(s) 1176
SaqAI TTAA 8 cut(s) 255, 417, 621, 858, 983, 1457, 1596, 1770
Sau96I GGNCC 2 cut(s) 1354, 1955
SchI GAGTC 6 cut(s) 28, 128, 395, 815, 1913, 1990
ScrFI CCNGG 3 cut(s) 873, 1130, 1979
SduI GDGCHC 4 cut(s) 29, 448, 948, 1176
SfaNI GCATC 2 cut(s) 1374, 1733
SfcI CTRYAG 5 cut(s) 320, 570, 825, 1251, 1812
Sfr274I CTCGAG 1 cut(s) 1164
SfuI TTCGAA 2 cut(s) 1920, 2027
SinI GGWCC 2 cut(s) 1354, 1955
SlaI CTCGAG 1 cut(s) 1164
SmlI CTYRAG 5 cut(s) 857, 1164, 1390, 1769, 1963
SmoI CTYRAG 5 cut(s) 857, 1164, 1390, 1769, 1963
SnaBI TACGTA 1 cut(s) 1238
SphI GCATGC 1 cut(s) 1594
SsiI CCGC 3 cut(s) 431, 1247, 1465
SspI AATATT 5 cut(s) 342, 359, 836, 903, 990
SspMI CTAG 5 cut(s) 141, 413, 881, 1223, 1376
SstI GAGCTC 1 cut(s) 1176
StyD4I CCNGG 3 cut(s) 871, 1128, 1977
StyI CCWWGG 4 cut(s) 265, 468, 517, 2017
TaaI ACNGT 3 cut(s) 536, 1824, 1897
TaiI ACGT 3 cut(s) 930, 1240, 1767
TaqII GACCGA 1 cut(s) 1524
TauI GCSGC 2 cut(s) 434, 1250
TfiI GAWTC 5 cut(s) 5, 113, 261, 1060, 1531
Tru1I TTAA 8 cut(s) 255, 417, 621, 858, 983, 1457, 1596, 1770
Tru9I TTAA 8 cut(s) 255, 417, 621, 858, 983, 1457, 1596, 1770
TscAI CASTG 7 cut(s) 73, 672, 1339, 1375, 1800, 1829, 2015
TseFI GTSAC 1 cut(s) 1265
TseI GCWGC 9 cut(s) 168, 434, 569, 893, 1028, 1250, 1253, 1811, 1814
Tsp45I GTSAC 1 cut(s) 1265
TspDTI ATGAA 8 cut(s) 756, 766, 1136, 1206, 1290, 1466, 1556, 1591
TspGWI ACGGA 2 cut(s) 707, 750
TspRI CASTG 7 cut(s) 73, 672, 1339, 1375, 1800, 1829, 2015
Van91I CCANNNNNTGG 2 cut(s) 382, 1824
Vha464I CTTAAG 2 cut(s) 857, 1769
VpaK11BI GGWCC 2 cut(s) 1354, 1955
XagI CCTNNNNNAGG 1 cut(s) 815
XapI RAATTY 3 cut(s) 770, 1037, 1598
XbaI TCTAGA 1 cut(s) 1375
XceI RCATGY 3 cut(s) 1490, 1594, 1658
XcmI CCANNNNNNNNNTGG 2 cut(s) 562, 2015
XhoI CTCGAG 1 cut(s) 1164
XmnI GAANNNNTTC 1 cut(s) 508
XspI CTAG 5 cut(s) 141, 413, 881, 1223, 1376
ZraI GACGTC 1 cut(s) 1765
Zsp2I ATGCAT 2 cut(s) 427, 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.