Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0014965

Physical Location & Seq

Genomic Coordinates Reverse (-)

226988 .. 233298

Gene Structure 6311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG002400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGGAGATCAATAGTTCAATTTCATGCCCTTCAACTCCTCGTTGGAACTCCGAGAGGCCGTTCCTCACCGGCCGCTTCCATCAGGAAACCAAAACGACGTCGCGATTCGCCGCCGCCGATATCAAGGATTCCCATACTCTGGGATTCCAAGATGCCATTGGTTGTTACAATGCTGCTGTTCAGGAACTGATGGTCATCGATGACCTCTTGTCCGCCATGGTTGGCATCCAAGGGCGCTACATTTCCATCAAAAGAGTCCGCGCAAGGGAGGATGATTTCACCTTTCAAGTTGATGCCTCCATGGATTTAGCTCTTCAGGAATTGGCCAAACGGGTGTTTCCTCTGTGCGAGAGCTTCATGCTCATCAATCAGTTTGTTGAATCAAGATCTCAGTTCAAGAATGGCTTAGTTAATCATGCCTTTGCTGCTGCACTCAGGGCCCTCCTCCTAGATTACCAGGCTATGGTGGCACAGCTTGAACACCAATTTCGACTCGGAAGACTCTCCTTACAAGGCTTGTGGTATTACTGTCAGCCAATGATGGGATCTATGCAAGCACTATCCACTGTAATACAGAAAGCTTCAGCTAATAATTTTGTAGGTTCTGCAGTTCTTAACCTTGTGCAGAGTCAGGCTAAGGCCATGGCTGGTGATACTGCTGTAAGGTCATTGCTAGAAAAGATGGCTGAATGTGCTAGCAATGCCTACCTGGGTATATTAGAGAGGTGGGTCTATGAAGGAGTCATTGATGATCCTTATGGTGAATTTTTCATTGCTGAGAACAAATCTCTTCAAAAGGAAAGCCTCACTCAAGATTATGATGCCAAGTATTGGAGGCAACGTTACAGCCTTAAGGATGGAATTCCTAGCTTTCTTGCAAATATTGCTGGAACAATTTTGATCACCGGAAAGTATCTAAATGTCATGAGAGAATGCGGGCACCATGTTCAGGTCCCTGTATCTGAAAATTCAAAATTGATGAGCTTTGGATCAAATCATCGTTATATCGAATGTATAAAATCTGCTTATGACTTTGCAAGCAGCGAGCTCTTAAATCTTATCAAAGAAAAGTATGATCTGATGGGAAAGCTACGATCTATAAAGCACTATCTTCTTCTTGATCAGGGTGACTTTTTAGTTCATTTTATGGATATTGCTCGGGATGAGCTTATGAAAAAGCTTGATGACATTTCTGTGGAGAAACTGCAATCTCTACTAGACCTTGCTTTGCGAACTACAGCAGCTGCAGCAGATCCCTGCCATGAGGACTTAACATGTTGTGTGGAAACATCTTCTTTGCTTAGAAGACTAGGGACACTTAAAGATAGTCAAAAGAGCAGGAATGTTCTTGATGATAATGATCTTGAGGAACCGCTGAGCTTAACTGGACTTGAGACATTTTCTTTGAATTATAAGGTTAGGTGGCCATTGTCTATAGTGATCTCTAAGAAAGCCCTAACAAAGTATCAGTTGATTTTCCGCTCCCTTTTCCACTGTAAGCATGTAGAACGCCAACTTTGTGGGGCGTGGCAAGTGCATCAGGGAGTTCGTGCCCTGAACATGCGTGGAAGTGCTATCGGCAGATCATCTCTCCTCTGTCGGAGCATGCTTAAATTTATTAATAGCCTTTTACACTATCTAACCTTTGAGGTTCTTGAACCCAATTGGCATGTGATGCATAATAGGCTTCAGAATGCAAAGAGCATAGATGAGGTTATCCAACACCATGACTTCTTCCTTGACAAGTGCTTGAGAGGGTGTTTGCTTCTTTTGCCTGAATTTCTCAAGAAAATCCACAAGGAAGAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0007098 GO:0008092 GO:0008150 GO:0008275 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022607 GO:0031023 GO:0031109 GO:0031122 GO:0031974 GO:0031981 GO:0032153 GO:0032155 GO:0032991 GO:0034622 GO:0043015 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0051225 GO:0051258 GO:0051298 GO:0051321 GO:0051415 GO:0051418 GO:0065003 GO:0070013 GO:0070925 GO:0071840 GO:0090307 GO:0097435 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

603

Amino Acids

68.69

Weight (kDa)

7.56

Isoelectric Point (pI)

43.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	66 - 357	7e-79	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	360 - 599	1.5e-59	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17410 AT5G17410
fragaria_vesca	FvH4_6g00120
malus_domestica	MD14G1089300.v1.1
prunus_persica	Prupe.7G036600_v2.0.a1 Prupe.7G036600_v2.0.a1
pyrus_communis	pycom14g07880
rosa_chinensis	RchiOBHm_Chr3g0447481
rosa_laevigata	RLG00000025994
rosa_roxburghii	Rroxscaffold_6G00425700
rosa_rugosa	Rorug02G0602200
rosa_samantha	Rh3AG002400 Rh3BG001900 Rh3CG002200 Rh3DG002300
rosa_wichuraiana	Rw3G000130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1413
AatII	GACGTC	1 cut(s)	101
AccB1I	GGYRCC	1 cut(s)	939
AccB7I	CCANNNNNTGG	3 cut(s)	139, 463, 831
AccBSI	CCGCTC	1 cut(s)	1482
AccII	CGCG	2 cut(s)	103, 261
AciI	CCGC	8 cut(s)	73, 111, 114, 213, 259, 936, 1373, 1480
AclI	AACGTT	1 cut(s)	841
AclWI	GGATC	4 cut(s)	553, 746, 997, 1247
AcoI	YGGCCR	3 cut(s)	70, 324, 1424
AcsI	RAATTY	5 cut(s)	764, 861, 967, 1613, 1778
AcuI	CTGAAG	3 cut(s)	299, 567, 1673
AcyI	GRCGYC	1 cut(s)	98
AfiI	CCNNNNNNNGG	6 cut(s)	139, 265, 463, 542, 831, 949
AflII	CTTAAG	1 cut(s)	851
AflIII	ACRYGT	1 cut(s)	1274
AhdI	GACNNNNNGTC	1 cut(s)	208
AjnI	CCWGG	2 cut(s)	456, 708
Alw21I	GWGCWC	1 cut(s)	1050
Alw26I	GTCTC	1 cut(s)	1388
AlwI	GGATC	4 cut(s)	553, 746, 997, 1247
AlwNI	CAGNNNCTG	2 cut(s)	187, 1244
Ama87I	CYCGRG	1 cut(s)	1158
AoxI	GGCC	6 cut(s)	56, 70, 324, 438, 639, 1424
ApaI	GGGCCC	1 cut(s)	442
ApeKI	GCWGC	7 cut(s)	173, 425, 428, 1041, 1241, 1244, 1247
ApoI	RAATTY	5 cut(s)	764, 861, 967, 1613, 1778
ArsI	GACNNNNNNTTYG	2 cut(s)	1387, 1419
AseI	ATTAAT	1 cut(s)	1620
AspLEI	GCGC	2 cut(s)	237, 263
AspS9I	GGNCC	3 cut(s)	438, 439, 952
AsuHPI	GGTGA	6 cut(s)	58, 271, 662, 773, 895, 1139
AsuNHI	GCTAGC	1 cut(s)	695
AvaI	CYCGRG	1 cut(s)	1158
AvaII	GGWCC	1 cut(s)	952
BaeGI	GKGCMC	3 cut(s)	442, 942, 1555
BaeI	ACNNNNGTAYC	2 cut(s)	645, 678
BalI	TGGCCA	2 cut(s)	326, 1426
BanI	GGYRCC	1 cut(s)	939
BanII	GRGCYC	2 cut(s)	442, 1050
BbsI	GAAGAC	2 cut(s)	505, 1312
Bbv12I	GWGCWC	1 cut(s)	1050
BbvI	GCAGC	7 cut(s)	160, 412, 415, 1053, 1231, 1253, 1259
BccI	CCATC	7 cut(s)	87, 184, 254, 535, 676, 851, 1075
BceAI	ACGGC	1 cut(s)	43
BciT130I	CCWGG	2 cut(s)	458, 710
BclI	TGATCA	2 cut(s)	900, 1120
BcoDI	GTCTC	1 cut(s)	1388
BfaI	CTAG	6 cut(s)	449, 674, 696, 867, 1217, 1310
BfmI	CTRYAG	4 cut(s)	606, 1236, 1245, 1434
BfoI	RGCGCY	1 cut(s)	238
BfrI	CTTAAG	1 cut(s)	851
BglII	AGATCT	1 cut(s)	386
BlpI	GCTNAGC	1 cut(s)	1376
Bme1390I	CCNGG	2 cut(s)	458, 710
Bme18I	GGWCC	1 cut(s)	952
BmeRI	GACNNNNNGTC	1 cut(s)	208
BmeT110I	CYCGRG	1 cut(s)	1158
BmgT120I	GGNCC	3 cut(s)	438, 439, 952
BmiI	GGNNCC	4 cut(s)	440, 941, 954, 1371
BmrFI	CCNGG	2 cut(s)	458, 710
BmsI	GCATC	6 cut(s)	142, 234, 283, 811, 1546, 1665
BmtI	GCTAGC	1 cut(s)	699
BpiI	GAAGAC	2 cut(s)	505, 1312
Bpu10I	CCTNAGC	1 cut(s)	636
Bpu1102I	GCTNAGC	1 cut(s)	1376
BpuEI	CTTGAG	5 cut(s)	795, 1385, 1412, 1769, 1771
Bsa29I	ATCGAT	1 cut(s)	198
BsaBI	GATNNNNATC	2 cut(s)	194, 1359
BsaHI	GRCGYC	1 cut(s)	98
BsaJI	CCNNGG	5 cut(s)	216, 229, 300, 642, 709
BsaWI	WCCGGW	1 cut(s)	905
BsaXI	ACNNNNNCTCC	2 cut(s)	826, 856
Bsc4I	CCNNNNNNNGG	6 cut(s)	139, 265, 463, 542, 831, 949
Bse118I	RCCGGY	1 cut(s)	68
Bse1I	ACTGG	1 cut(s)	1390
Bse3DI	GCAATG	3 cut(s)	668, 706, 771
Bse8I	GATNNNNATC	2 cut(s)	194, 1359
BseBI	CCWGG	2 cut(s)	458, 710
BseCI	ATCGAT	1 cut(s)	198
BseDI	CCNNGG	5 cut(s)	216, 229, 300, 642, 709
BseGI	GGATG	4 cut(s)	225, 277, 862, 1168
BseJI	GATNNNNATC	2 cut(s)	194, 1359
BseLI	CCNNNNNNNGG	6 cut(s)	139, 265, 463, 542, 831, 949
BseMI	GCAATG	3 cut(s)	668, 706, 771
BseMII	CTCAG	4 cut(s)	404, 448, 768, 1367
BseNI	ACTGG	1 cut(s)	1390
BseRI	GAGGAG	3 cut(s)	27, 434, 1583
BseSI	GKGCMC	3 cut(s)	442, 942, 1555
BseX3I	CGGCCG	1 cut(s)	70
BseXI	GCAGC	7 cut(s)	160, 412, 415, 1053, 1231, 1253, 1259
BsgI	GTGCAG	2 cut(s)	414, 644
Bsh1236I	CGCG	2 cut(s)	103, 261
Bsh1285I	CGRYCG	1 cut(s)	73
BshFI	GGCC	6 cut(s)	58, 72, 326, 440, 641, 1426
BshNI	GGYRCC	1 cut(s)	939
BshVI	ATCGAT	1 cut(s)	198
BsiEI	CGRYCG	1 cut(s)	73
BsiHKAI	GWGCWC	1 cut(s)	1050
BsiHKCI	CYCGRG	1 cut(s)	1158
BsiSI	CCGG	2 cut(s)	69, 906
BslFI	GGGAC	2 cut(s)	938, 1327
BslI	CCNNNNNNNGG	6 cut(s)	139, 265, 463, 542, 831, 949
BsmAI	GTCTC	1 cut(s)	1388
BsmFI	GGGAC	2 cut(s)	938, 1327
BsmI	GAATGC	2 cut(s)	938, 1699
BsnI	GGCC	6 cut(s)	58, 72, 326, 440, 641, 1426
BsoBI	CYCGRG	1 cut(s)	1158
Bsp120I	GGGCCC	1 cut(s)	438
Bsp1286I	GDGCHC	4 cut(s)	442, 942, 1050, 1555
Bsp1720I	GCTNAGC	1 cut(s)	1376
Bsp19I	CCATGG	3 cut(s)	216, 300, 642
Bsp68I	TCGCGA	1 cut(s)	103
BspACI	CCGC	8 cut(s)	73, 111, 114, 213, 259, 936, 1373, 1480
BspANI	GGCC	6 cut(s)	58, 72, 326, 440, 641, 1426
BspCNI	CTCAG	4 cut(s)	403, 447, 769, 1368
BspDI	ATCGAT	1 cut(s)	198
BspFNI	CGCG	2 cut(s)	103, 261
BspHI	TCATGA	1 cut(s)	924
BspLI	GGNNCC	4 cut(s)	440, 941, 954, 1371
BspMAI	CTGCAG	2 cut(s)	610, 1249
BspOI	GCTAGC	1 cut(s)	699
BspPI	GGATC	4 cut(s)	553, 746, 997, 1247
BspQI	GCTCTTC	1 cut(s)	318
BspT107I	GGYRCC	1 cut(s)	939
BspTI	CTTAAG	1 cut(s)	851
BsrBI	CCGCTC	1 cut(s)	1482
BsrDI	GCAATG	3 cut(s)	668, 706, 771
BsrFI	RCCGGY	1 cut(s)	68
BsrI	ACTGG	1 cut(s)	1390
BssAI	RCCGGY	1 cut(s)	68
BssECI	CCNNGG	5 cut(s)	216, 229, 300, 642, 709
BssNI	GRCGYC	1 cut(s)	98
BssT1I	CCWWGG	4 cut(s)	216, 229, 300, 642
Bst2UI	CCWGG	2 cut(s)	458, 710
Bst4CI	ACNGT	3 cut(s)	530, 568, 1496
Bst6I	CTCTTC	2 cut(s)	318, 795
BstACI	GRCGYC	1 cut(s)	98
BstAFI	CTTAAG	1 cut(s)	851
BstAPI	GCANNNNNTGC	2 cut(s)	884, 1675
BstC8I	GCNNGC	6 cut(s)	555, 697, 938, 1039, 1046, 1607
BstDEI	CTNAG	8 cut(s)	390, 406, 434, 636, 777, 1301, 1376, 1446
BstDSI	CCRYGG	3 cut(s)	216, 300, 642
BstF5I	GGATG	4 cut(s)	225, 277, 862, 1168
BstFNI	CGCG	2 cut(s)	103, 261
BstH2I	RGCGCY	1 cut(s)	238
BstHHI	GCGC	2 cut(s)	237, 263
BstMAI	GTCTC	1 cut(s)	1388
BstMCI	CGRYCG	1 cut(s)	73
BstNI	CCWGG	2 cut(s)	458, 710
BstNSI	RCATGY	5 cut(s)	1278, 1505, 1564, 1609, 1673
BstSCI	CCNGG	2 cut(s)	456, 708
BstSFI	CTRYAG	4 cut(s)	606, 1236, 1245, 1434
BstSLI	GKGCMC	3 cut(s)	442, 942, 1555
BstUI	CGCG	2 cut(s)	103, 261
BstV1I	GCAGC	7 cut(s)	160, 412, 415, 1053, 1231, 1253, 1259
BstV2I	GAAGAC	2 cut(s)	505, 1312
BstX2I	RGATCY	3 cut(s)	386, 545, 1252
BstXI	CCANNNNNNTGG	1 cut(s)	1520
BstYI	RGATCY	3 cut(s)	386, 545, 1252
BstZI	CGGCCG	1 cut(s)	70
Bsu15I	ATCGAT	1 cut(s)	198
BsuRI	GGCC	6 cut(s)	58, 72, 326, 440, 641, 1426
BsuTUI	ATCGAT	1 cut(s)	198
BtgI	CCRYGG	3 cut(s)	216, 300, 642
BtsCI	GGATG	4 cut(s)	225, 277, 862, 1168
BtsIMutI	CAGTG	2 cut(s)	564, 1492
BtuMI	TCGCGA	1 cut(s)	103
Cac8I	GCNNGC	6 cut(s)	555, 697, 938, 1039, 1046, 1607
CaiI	CAGNNNCTG	2 cut(s)	187, 1244
CciI	TCATGA	1 cut(s)	924
CfoI	GCGC	2 cut(s)	237, 263
Cfr10I	RCCGGY	1 cut(s)	68
Cfr13I	GGNCC	3 cut(s)	438, 439, 952
ClaI	ATCGAT	1 cut(s)	198
CspCI	CAANNNNNGTGG	2 cut(s)	500, 535
DdeI	CTNAG	8 cut(s)	390, 406, 434, 636, 777, 1301, 1376, 1446
DriI	GACNNNNNGTC	1 cut(s)	208
EaeI	YGGCCR	3 cut(s)	70, 324, 1424
EagI	CGGCCG	1 cut(s)	70
Eam1104I	CTCTTC	2 cut(s)	318, 795
Eam1105I	GACNNNNNGTC	1 cut(s)	208
EarI	CTCTTC	2 cut(s)	318, 795
EciI	GGCGGA	1 cut(s)	202
Ecl136II	GAGCTC	1 cut(s)	1048
EclXI	CGGCCG	1 cut(s)	70
Eco130I	CCWWGG	4 cut(s)	216, 229, 300, 642
Eco24I	GRGCYC	2 cut(s)	442, 1050
Eco32I	GATATC	1 cut(s)	121
Eco47I	GGWCC	1 cut(s)	952
Eco52I	CGGCCG	1 cut(s)	70
Eco53kI	GAGCTC	1 cut(s)	1048
Eco57I	CTGAAG	3 cut(s)	299, 567, 1673
Eco88I	CYCGRG	1 cut(s)	1158
EcoICRI	GAGCTC	1 cut(s)	1048
EcoO109I	RGGNCCY	3 cut(s)	438, 439, 952
EcoRI	GAATTC	1 cut(s)	861
EcoRII	CCWGG	2 cut(s)	456, 708
EcoRV	GATATC	1 cut(s)	121
EcoT14I	CCWWGG	4 cut(s)	216, 229, 300, 642
EcoT22I	ATGCAT	1 cut(s)	1680
EcoT38I	GRGCYC	2 cut(s)	442, 1050
ErhI	CCWWGG	4 cut(s)	216, 229, 300, 642
FalI	AAGNNNNNCTT	2 cut(s)	389, 421
FaqI	GGGAC	2 cut(s)	938, 1327
FauI	CCCGC	1 cut(s)	929
FbaI	TGATCA	2 cut(s)	900, 1120
FokI	GGATG	4 cut(s)	212, 284, 869, 1175
FriOI	GRGCYC	2 cut(s)	442, 1050
FspBI	CTAG	6 cut(s)	449, 674, 696, 867, 1217, 1310
GlaI	GCGC	2 cut(s)	236, 262
HaeII	RGCGCY	1 cut(s)	238
HaeIII	GGCC	6 cut(s)	58, 72, 326, 440, 641, 1426
HapII	CCGG	2 cut(s)	69, 906
HhaI	GCGC	2 cut(s)	237, 263
Hin1I	GRCGYC	1 cut(s)	98
Hin6I	GCGC	2 cut(s)	235, 261
HinP1I	GCGC	2 cut(s)	235, 261
HindIII	AAGCTT	2 cut(s)	579, 1178
HinfI	GANTC	9 cut(s)	105, 128, 144, 255, 380, 492, 501, 628, 741
HpaII	CCGG	2 cut(s)	69, 906
HphI	GGTGA	6 cut(s)	58, 271, 662, 773, 895, 1139
Hpy188I	TCNGA	6 cut(s)	52, 497, 964, 1080, 1602, 1692
Hpy99I	CGWCG	2 cut(s)	100, 103
HpyAV	CCTTC	2 cut(s)	39, 731
HpyCH4III	ACNGT	3 cut(s)	530, 568, 1496
HpyCH4IV	ACGT	2 cut(s)	98, 841
HpyF3I	CTNAG	8 cut(s)	390, 406, 434, 636, 777, 1301, 1376, 1446
HpySE526I	ACGT	2 cut(s)	98, 841
Hsp92I	GRCGYC	1 cut(s)	98
HspAI	GCGC	2 cut(s)	235, 261
Ksp22I	TGATCA	2 cut(s)	900, 1120
LguI	GCTCTTC	1 cut(s)	318
LmnI	GCTCC	2 cut(s)	1487, 1602
Lsp1109I	GCAGC	7 cut(s)	160, 412, 415, 1053, 1231, 1253, 1259
LweI	GCATC	6 cut(s)	142, 234, 283, 811, 1546, 1665
MaeI	CTAG	6 cut(s)	449, 674, 696, 867, 1217, 1310
MaeII	ACGT	2 cut(s)	98, 841
MaeIII	GTNAC	3 cut(s)	164, 842, 1127
MbiI	CCGCTC	1 cut(s)	1482
MboII	GAAGA	8 cut(s)	305, 510, 782, 1103, 1106, 1284, 1317, 1726
MfeI	CAATTG	1 cut(s)	1663
MflI	RGATCY	3 cut(s)	386, 545, 1252
MhlI	GDGCHC	4 cut(s)	442, 942, 1050, 1555
MlsI	TGGCCA	2 cut(s)	326, 1426
MluNI	TGGCCA	2 cut(s)	326, 1426
MlyI	GAGTC	5 cut(s)	264, 486, 495, 637, 750
MmeI	TCCRAC	3 cut(s)	23, 1580, 1744
Mox20I	TGGCCA	2 cut(s)	326, 1426
Mph1103I	ATGCAT	1 cut(s)	1680
MscI	TGGCCA	2 cut(s)	326, 1426
MseI	TTAA	9 cut(s)	411, 615, 852, 1052, 1271, 1320, 1382, 1611, 1620
MslI	CAYNNNNRTG	1 cut(s)	1193
Msp20I	TGGCCA	2 cut(s)	326, 1426
MspA1I	CMGCKG	2 cut(s)	1244, 1375
MspCI	CTTAAG	1 cut(s)	851
MspI	CCGG	2 cut(s)	69, 906
MspR9I	CCNGG	2 cut(s)	458, 710
MunI	CAATTG	1 cut(s)	1663
Mva1269I	GAATGC	2 cut(s)	938, 1699
MvaI	CCWGG	2 cut(s)	458, 710
MvnI	CGCG	2 cut(s)	103, 261
NcoI	CCATGG	3 cut(s)	216, 300, 642
NheI	GCTAGC	1 cut(s)	695
NlaIV	GGNNCC	4 cut(s)	440, 941, 954, 1371
NmuCI	GTSAC	1 cut(s)	1127
NruI	TCGCGA	1 cut(s)	103
NsiI	ATGCAT	1 cut(s)	1680
NspI	RCATGY	5 cut(s)	1278, 1505, 1564, 1609, 1673
PaeI	GCATGC	1 cut(s)	1609
PagI	TCATGA	1 cut(s)	924
PciI	ACATGT	1 cut(s)	1274
PciSI	GCTCTTC	1 cut(s)	318
PcsI	WCGNNNNNNNCGW	1 cut(s)	114
PctI	GAATGC	2 cut(s)	938, 1699
PfeI	GAWTC	4 cut(s)	105, 128, 144, 380
PflMI	CCANNNNNTGG	3 cut(s)	139, 463, 831
PleI	GAGTC	5 cut(s)	263, 486, 495, 636, 749
PpsI	GAGTC	5 cut(s)	263, 486, 495, 636, 749
PpuMI	RGGWCCY	1 cut(s)	952
PscI	ACATGT	1 cut(s)	1274
PshBI	ATTAAT	1 cut(s)	1620
PsiI	TTATAA	1 cut(s)	1413
Psp124BI	GAGCTC	1 cut(s)	1050
Psp1406I	AACGTT	1 cut(s)	841
Psp5II	RGGWCCY	1 cut(s)	952
Psp6I	CCWGG	2 cut(s)	456, 708
PspGI	CCWGG	2 cut(s)	456, 708
PspN4I	GGNNCC	4 cut(s)	440, 941, 954, 1371
PspOMI	GGGCCC	1 cut(s)	438
PspPI	GGNCC	3 cut(s)	438, 439, 952
PspPPI	RGGWCCY	1 cut(s)	952
PstI	CTGCAG	2 cut(s)	610, 1249
PstNI	CAGNNNCTG	2 cut(s)	187, 1244
PsuI	RGATCY	3 cut(s)	386, 545, 1252
PvuII	CAGCTG	1 cut(s)	1244
RruI	TCGCGA	1 cut(s)	103
RseI	CAYNNNNRTG	1 cut(s)	1193
SacI	GAGCTC	1 cut(s)	1050
SapI	GCTCTTC	1 cut(s)	318
SaqAI	TTAA	9 cut(s)	411, 615, 852, 1052, 1271, 1320, 1382, 1611, 1620
Sau96I	GGNCC	3 cut(s)	438, 439, 952
SchI	GAGTC	5 cut(s)	264, 486, 495, 637, 750
ScrFI	CCNGG	2 cut(s)	458, 710
SduI	GDGCHC	4 cut(s)	442, 942, 1050, 1555
SfaNI	GCATC	6 cut(s)	142, 234, 283, 811, 1546, 1665
SfcI	CTRYAG	4 cut(s)	606, 1236, 1245, 1434
SinI	GGWCC	1 cut(s)	952
SmiMI	CAYNNNNRTG	1 cut(s)	1193
SmlI	CTYRAG	6 cut(s)	810, 851, 1364, 1391, 1750, 1784
SmoI	CTYRAG	6 cut(s)	810, 851, 1364, 1391, 1750, 1784
SphI	GCATGC	1 cut(s)	1609
SsiI	CCGC	8 cut(s)	73, 111, 114, 213, 259, 936, 1373, 1480
SspI	AATATT	1 cut(s)	883
SspMI	CTAG	6 cut(s)	449, 674, 696, 867, 1217, 1310
SstI	GAGCTC	1 cut(s)	1050
StyD4I	CCNGG	2 cut(s)	456, 708
StyI	CCWWGG	4 cut(s)	216, 229, 300, 642
TaaI	ACNGT	3 cut(s)	530, 568, 1496
TaiI	ACGT	2 cut(s)	101, 844
TaqI	TCGA	3 cut(s)	198, 490, 1008
TauI	GCSGC	3 cut(s)	75, 113, 116
TfiI	GAWTC	4 cut(s)	105, 128, 144, 380
Tru1I	TTAA	9 cut(s)	411, 615, 852, 1052, 1271, 1320, 1382, 1611, 1620
Tru9I	TTAA	9 cut(s)	411, 615, 852, 1052, 1271, 1320, 1382, 1611, 1620
TscAI	CASTG	2 cut(s)	571, 1499
TseFI	GTSAC	1 cut(s)	1127
TseI	GCWGC	7 cut(s)	173, 425, 428, 1041, 1241, 1244, 1247
Tsp45I	GTSAC	1 cut(s)	1127
TspDTI	ATGAA	6 cut(s)	12, 346, 750, 760, 1130, 1187
TspRI	CASTG	2 cut(s)	571, 1499
Van91I	CCANNNNNTGG	3 cut(s)	139, 463, 831
Vha464I	CTTAAG	1 cut(s)	851
VpaK11BI	GGWCC	1 cut(s)	952
VspI	ATTAAT	1 cut(s)	1620
XapI	RAATTY	5 cut(s)	764, 861, 967, 1613, 1778
XceI	RCATGY	5 cut(s)	1278, 1505, 1564, 1609, 1673
XcmI	CCANNNNNNNNNTGG	1 cut(s)	155
XspI	CTAG	6 cut(s)	449, 674, 696, 867, 1217, 1310
ZraI	GACGTC	1 cut(s)	99
Zsp2I	ATGCAT	1 cut(s)	1680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.