Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0014965

Physical Location & Seq

Genomic Coordinates Reverse (-)

11164472 .. 11179754

Gene Structure 15283 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1089300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGGAGAATAATACTTCAACAATTTCATGCCCCTCAACTCCTCGTTGGAACTCCGAGCGCCCTTTCCTCACCGGCCGCTTTCACCAGGAAACCAAATCGACGTCGCGATTTGCAGATACCGATGGCTATTCCGTTGGTTCTCTTTCCTTGGGATTCGAAAAGGCCATTGGTTGTTACAATGCTGCTGTTCAGGAACTTGTTGTCATCGATGACATTTTGTCTGCAATGGTTGGGATCCAAGGACGCTACGTTTCAATCAATAGGGCACACGGAAATGAGGACAAGTACACCTTTCAAGTTGATGCATCCATGGATTTAGCTCTTCAGGAATTAGCCAAACGGGTATTCCCTCTGTGCGAGAACTTTATGCTCATTAACCAGTTTGTTGAATCAAGATCCCAATTCAAGAATGGCTTAGTCAATCATGCATTTGCTGCTGCGCTGAGGGCGCTCCTTCTAGATTACCAGGCCATGGTGGCACAGCTAGAGCACCAGTTTCGACTGGGAAGACTGTCCCTACAAGGCTTGTGGTTTTACTGTCAGCCAATGATGGGGTCCATGCAAGCACTATCCAGTGTAATACAGACGGCTTCTGCTAATAATTTTGCAGGTTCTGCAGTACTTAACCTCTTGCAGAGCCAGGCCAAGGCCATGGCTGGTGATAGTGGTGTAAGGTCATTACTAGAAAAGATGACAGAATGTGCTTGCAATGCATACCTTGGAATATTGGAGAGATGGGTTTATGAAGGAGTCATTGATGATCCTTTTGGTGAATTTTTCATTGCTGAAAACAAATATCTTCAAAAGGAAAGCCTCACTCAAGATTATGATGCCAAGTATTGGAGGCAATGTTACAGCCTCAAGGATGGAATTCCTAGCTTCCTAGCAAATATTTCTGGGACAATTTTGACCACAGGAAAATATTTAAATGTCATGAGGGAATGCGGACATCATGTTCAGGTCCCTCTATCAGAAAATTCGAAATTGATGACCTTTGGCTCTAATCACCGTTATCTTGAGTGTATAAAGTCTGCGTATGACTTTGCCAGCAGTGAGCTCTTAAATCTCATCAAAGAAAAGTATGATCTGATGGGAAAGCTGCGATCTATAAAGCACTATCTTCTTCTTGATCAGGGTGATTTTTTAGTTCATTTTATGGATATCGCTCGAGATGAGCTCACGAAAAAGCTTGATGAGATTTCTGTGGAGAAGCTGCAGTCTCTTCTAGACCTTGCTTTGCGCACCACAGCAGCTGCAGCAGATCCTTGCCATGAGGACTTAACATGTTGCGTGGAAACATCTTCTTTGCTCAAAAAACTGGGGACACTTAAAGATCGTGAAAAGAGCAGGCCTGCCCCTGATGATAATGATCTGGAGGAGCCAGTGAGCATAACTGGCCTTGAGACATTCTCTTTAAATTATAAGATTCGGTGGCCGTTGTCTATTGTTATCTCAAAAAATTCCCTAACAAAGTACCAGTTAATTTTCCGCTTTCTTTTCCACTGTAAGCATGTGGATCGCCAGCTTTGTGGGGCTTGGCAAGCACATCAAGCAGTTCGTGCCCTTAACATGCGTGGAACTGCTATCTCCAGATCATCACTGCTGTGCCGTAGCATGCTTAAATTTATTAATAGCCTTCTACACTATCTAACATTTGAGGTTATTGAGCCCAATTGCCATGTGATGCATAAAAGACTTAAGACTGCAAAGAGCATAGATGAGGTTATCCAACACCATGACTTTTTCCTTGACAAGTGTTTGAGGGGATGCTTGCTTCTTTTGCCTGAATTTCTTAAGAAGGTGGAGAGTCTGAAATTGCTTTGCTTACAATATGCTGCAGCAACTCAGTGGTTAATATCATCTTCTATTGATGTTCCTAGCCTTGTCGATTTTGATGGTTCACTTGTGCCAGAAAAACCGAAACCATCAAAATCGCGGACCCCATCTCAGGCACTAAAATTAAGCTCCAGCAACAAAACTGTTGCTGACTCTATTCTGAAATTCGAGAGGGAGTTCAATGCAGAGCTTCAGAGCCTGGGACCGATATTGAACAGCAGTTCCAAAGCAGAACCATATTTGACTCATCTTTCGCAGTGCATTTTGGGGACCGGAAATGAACAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0007098 GO:0008092 GO:0008150 GO:0008275 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022607 GO:0031023 GO:0031109 GO:0031122 GO:0031974 GO:0031981 GO:0032153 GO:0032155 GO:0032991 GO:0034622 GO:0043015 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0051225 GO:0051258 GO:0051298 GO:0051321 GO:0051415 GO:0051418 GO:0065003 GO:0070013 GO:0070925 GO:0071840 GO:0090307 GO:0097435 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

708

Amino Acids

79.57

Weight (kDa)

6.83

Isoelectric Point (pI)

42.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	69 - 360	3.1e-76	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	363 - 696	1.1e-65	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17410 AT5G17410
fragaria_vesca	FvH4_6g00120
malus_domestica	MD14G1089300.v1.1
prunus_persica	Prupe.7G036600_v2.0.a1 Prupe.7G036600_v2.0.a1
pyrus_communis	pycom14g07880
rosa_chinensis	RchiOBHm_Chr3g0447481
rosa_laevigata	RLG00000025994
rosa_roxburghii	Rroxscaffold_6G00425700
rosa_rugosa	Rorug02G0602200
rosa_samantha	Rh3AG002400 Rh3BG001900 Rh3CG002200 Rh3DG002300
rosa_wichuraiana	Rw3G000130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1422
AatII	GACGTC	1 cut(s)	104
Acc16I	TGCGCA	1 cut(s)	1241
Acc36I	ACCTGC	1 cut(s)	599
AccB7I	CCANNNNNTGG	2 cut(s)	472, 840
AccII	CGCG	2 cut(s)	106, 1936
AciI	CCGC	4 cut(s)	76, 945, 1489, 1936
AclWI	GGATC	6 cut(s)	229, 242, 390, 755, 1256, 1524
AcoI	YGGCCR	2 cut(s)	73, 1433
AcsI	RAATTY	7 cut(s)	773, 870, 976, 1459, 1622, 1787, 2000
AcuI	CTGAAG	2 cut(s)	308, 2012
AcyI	GRCGYC	1 cut(s)	101
AfaI	GTAC	3 cut(s)	287, 621, 1475
AfiI	CCNNNNNNNGG	5 cut(s)	472, 551, 646, 840, 1948
AflII	CTTAAG	2 cut(s)	1697, 1793
AflIII	ACRYGT	1 cut(s)	1283
AgsI	TTSAA	8 cut(s)	18, 255, 296, 389, 406, 803, 2017, 2050
AhdI	GACNNNNNGTC	1 cut(s)	217
AjnI	CCWGG	4 cut(s)	84, 465, 639, 2034
AjuI	GAANNNNNNNTTGG	4 cut(s)	150, 182, 329, 361
AleI	CACNNNNGTG	1 cut(s)	1603
AloI	GAACNNNNNNTCC	4 cut(s)	939, 971, 2042, 2074
Alw21I	GWGCWC	3 cut(s)	492, 1059, 1179
Alw26I	GTCTC	2 cut(s)	1224, 1397
AlwI	GGATC	6 cut(s)	229, 242, 390, 755, 1256, 1524
AlwNI	CAGNNNCTG	3 cut(s)	614, 1253, 2035
Ama87I	CYCGRG	1 cut(s)	1167
AoxI	GGCC	8 cut(s)	73, 162, 468, 642, 648, 1349, 1396, 1433
ApoI	RAATTY	7 cut(s)	773, 870, 976, 1459, 1622, 1787, 2000
ArsI	GACNNNNNNTTYG	2 cut(s)	2071, 2103
AseI	ATTAAT	1 cut(s)	1629
AspLEI	GCGC	4 cut(s)	60, 442, 451, 1242
AspS9I	GGNCC	5 cut(s)	555, 961, 1938, 2039, 2106
AsuHPI	GGTGA	6 cut(s)	61, 74, 671, 782, 998, 1148
AsuII	TTCGAA	2 cut(s)	156, 980
AvaI	CYCGRG	1 cut(s)	1167
AvaII	GGWCC	5 cut(s)	555, 961, 1938, 2039, 2106
BaeGI	GKGCMC	2 cut(s)	268, 1564
BamHI	GGATCC	1 cut(s)	234
BanII	GRGCYC	3 cut(s)	1059, 1179, 1671
BbsI	GAAGAC	1 cut(s)	514
Bbv12I	GWGCWC	3 cut(s)	492, 1059, 1179
BbvCI	CCTCAGC	1 cut(s)	443
BccI	CCATC	8 cut(s)	116, 544, 729, 860, 1084, 1889, 1933, 1951
BceAI	ACGGC	3 cut(s)	603, 1420, 1593
BcgI	CGANNNNNNTGC	4 cut(s)	479, 513, 1499, 1533
BciT130I	CCWGG	4 cut(s)	86, 467, 641, 2036
BclI	TGATCA	1 cut(s)	1129
BcoDI	GTCTC	2 cut(s)	1224, 1397
BfaI	CTAG	7 cut(s)	458, 485, 683, 876, 884, 1226, 1878
BfmI	CTRYAG	4 cut(s)	615, 1214, 1254, 1836
BfoI	RGCGCY	2 cut(s)	61, 452
BfrI	CTTAAG	2 cut(s)	1697, 1793
BfuAI	ACCTGC	1 cut(s)	599
BglI	GCCNNNNNGGC	1 cut(s)	476
BmcAI	AGTACT	1 cut(s)	621
Bme1390I	CCNGG	4 cut(s)	86, 467, 641, 2036
Bme18I	GGWCC	5 cut(s)	555, 961, 1938, 2039, 2106
BmeRI	GACNNNNNGTC	1 cut(s)	217
BmeT110I	CYCGRG	1 cut(s)	1167
BmgT120I	GGNCC	5 cut(s)	555, 961, 1938, 2039, 2106
BmiI	GGNNCC	7 cut(s)	236, 556, 963, 1380, 1940, 2040, 2107
BmrFI	CCNGG	4 cut(s)	86, 467, 641, 2036
BmrI	ACTGGG	2 cut(s)	512, 1328
BmsI	GCATC	5 cut(s)	292, 314, 820, 1674, 1757
BmuI	ACTGGG	2 cut(s)	512, 1328
BpiI	GAAGAC	1 cut(s)	514
BplI	GAGNNNNNCTC	4 cut(s)	1161, 1193, 1394, 1426
BpmI	CTGGAG	3 cut(s)	1394, 1573, 1951
Bpu10I	CCTNAGC	1 cut(s)	443
Bpu14I	TTCGAA	2 cut(s)	156, 980
BpuEI	CTTGAG	4 cut(s)	804, 845, 1037, 1421
Bsa29I	ATCGAT	1 cut(s)	207
BsaBI	GATNNNNATC	1 cut(s)	1368
BsaHI	GRCGYC	1 cut(s)	101
BsaJI	CCNNGG	8 cut(s)	147, 238, 309, 471, 645, 651, 718, 2035
BsaWI	WCCGGW	1 cut(s)	2108
BsaXI	ACNNNNNCTCC	2 cut(s)	835, 865
Bsc4I	CCNNNNNNNGG	5 cut(s)	472, 551, 646, 840, 1948
Bse118I	RCCGGY	1 cut(s)	71
Bse1I	ACTGG	8 cut(s)	379, 493, 507, 573, 1323, 1382, 1399, 1477
Bse3DI	GCAATG	4 cut(s)	231, 715, 780, 854
Bse8I	GATNNNNATC	1 cut(s)	1368
BseBI	CCWGG	4 cut(s)	86, 467, 641, 2036
BseCI	ATCGAT	1 cut(s)	207
BseDI	CCNNGG	8 cut(s)	147, 238, 309, 471, 645, 651, 718, 2035
BseGI	GGATG	3 cut(s)	305, 871, 1772
BseJI	GATNNNNATC	1 cut(s)	1368
BseLI	CCNNNNNNNGG	5 cut(s)	472, 551, 646, 840, 1948
BseMI	GCAATG	4 cut(s)	231, 715, 780, 854
BseMII	CTCAG	3 cut(s)	434, 1859, 1961
BseNI	ACTGG	8 cut(s)	379, 493, 507, 573, 1323, 1382, 1399, 1477
BseRI	GAGGAG	2 cut(s)	30, 1391
BseSI	GKGCMC	2 cut(s)	268, 1564
BseX3I	CGGCCG	1 cut(s)	73
Bsh1236I	CGCG	2 cut(s)	106, 1936
Bsh1285I	CGRYCG	1 cut(s)	76
BshFI	GGCC	8 cut(s)	75, 164, 470, 644, 650, 1351, 1398, 1435
BshVI	ATCGAT	1 cut(s)	207
BsiEI	CGRYCG	1 cut(s)	76
BsiHKAI	GWGCWC	3 cut(s)	492, 1059, 1179
BsiHKCI	CYCGRG	1 cut(s)	1167
BsiSI	CCGG	2 cut(s)	72, 2109
BslFI	GGGAC	6 cut(s)	499, 913, 947, 1336, 2052, 2119
BslI	CCNNNNNNNGG	5 cut(s)	472, 551, 646, 840, 1948
BsmAI	GTCTC	2 cut(s)	1224, 1397
BsmFI	GGGAC	6 cut(s)	499, 913, 947, 1336, 2052, 2119
BsmI	GAATGC	1 cut(s)	947
BsnI	GGCC	8 cut(s)	75, 164, 470, 644, 650, 1351, 1398, 1435
BsoBI	CYCGRG	1 cut(s)	1167
Bsp119I	TTCGAA	2 cut(s)	156, 980
Bsp1286I	GDGCHC	6 cut(s)	268, 492, 1059, 1179, 1564, 1671
Bsp19I	CCATGG	3 cut(s)	309, 471, 651
Bsp68I	TCGCGA	1 cut(s)	106
BspACI	CCGC	4 cut(s)	76, 945, 1489, 1936
BspANI	GGCC	8 cut(s)	75, 164, 470, 644, 650, 1351, 1398, 1435
BspCNI	CTCAG	3 cut(s)	435, 1858, 1960
BspDI	ATCGAT	1 cut(s)	207
BspFNI	CGCG	2 cut(s)	106, 1936
BspHI	TCATGA	1 cut(s)	933
BspLI	GGNNCC	7 cut(s)	236, 556, 963, 1380, 1940, 2040, 2107
BspMAI	CTGCAG	4 cut(s)	619, 1218, 1258, 1840
BspMI	ACCTGC	1 cut(s)	599
BspPI	GGATC	6 cut(s)	229, 242, 390, 755, 1256, 1524
BspQI	GCTCTTC	1 cut(s)	327
BspT104I	TTCGAA	2 cut(s)	156, 980
BspTI	CTTAAG	2 cut(s)	1697, 1793
BsrDI	GCAATG	4 cut(s)	231, 715, 780, 854
BsrFI	RCCGGY	1 cut(s)	71
BsrI	ACTGG	8 cut(s)	379, 493, 507, 573, 1323, 1382, 1399, 1477
BssAI	RCCGGY	1 cut(s)	71
BssECI	CCNNGG	8 cut(s)	147, 238, 309, 471, 645, 651, 718, 2035
BssNI	GRCGYC	1 cut(s)	101
BssT1I	CCWWGG	7 cut(s)	147, 238, 309, 471, 645, 651, 718
Bst2UI	CCWGG	4 cut(s)	86, 467, 641, 2036
Bst4CI	ACNGT	5 cut(s)	513, 539, 1010, 1505, 1981
Bst6I	CTCTTC	2 cut(s)	327, 1227
BstACI	GRCGYC	1 cut(s)	101
BstAFI	CTTAAG	2 cut(s)	1697, 1793
BstAPI	GCANNNNNTGC	3 cut(s)	434, 614, 1559
BstBI	TTCGAA	2 cut(s)	156, 980
BstC8I	GCNNGC	9 cut(s)	564, 706, 1048, 1349, 1353, 1523, 1542, 1616, 1772
BstDEI	CTNAG	4 cut(s)	415, 443, 1845, 1947
BstDSI	CCRYGG	3 cut(s)	309, 471, 651
BstF5I	GGATG	3 cut(s)	305, 871, 1772
BstFNI	CGCG	2 cut(s)	106, 1936
BstH2I	RGCGCY	2 cut(s)	61, 452
BstHHI	GCGC	4 cut(s)	60, 442, 451, 1242
BstMAI	GTCTC	2 cut(s)	1224, 1397
BstMCI	CGRYCG	1 cut(s)	76
BstNI	CCWGG	4 cut(s)	86, 467, 641, 2036
BstNSI	RCATGY	4 cut(s)	1287, 1514, 1573, 1618
BstSCI	CCNGG	4 cut(s)	84, 465, 639, 2034
BstSFI	CTRYAG	4 cut(s)	615, 1214, 1254, 1836
BstSLI	GKGCMC	2 cut(s)	268, 1564
BstUI	CGCG	2 cut(s)	106, 1936
BstV2I	GAAGAC	1 cut(s)	514
BstX2I	RGATCY	3 cut(s)	234, 395, 1261
BstXI	CCANNNNNNTGG	2 cut(s)	652, 1529
BstYI	RGATCY	3 cut(s)	234, 395, 1261
BstZI	CGGCCG	1 cut(s)	73
Bsu15I	ATCGAT	1 cut(s)	207
BsuRI	GGCC	8 cut(s)	75, 164, 470, 644, 650, 1351, 1398, 1435
BsuTUI	ATCGAT	1 cut(s)	207
BtgI	CCRYGG	3 cut(s)	309, 471, 651
BtsCI	GGATG	3 cut(s)	305, 871, 1772
BtsI	GCAGTG	3 cut(s)	1057, 1598, 2099
BtsIMutI	CAGTG	7 cut(s)	580, 1057, 1389, 1501, 1598, 1853, 2099
BtuMI	TCGCGA	1 cut(s)	106
BveI	ACCTGC	1 cut(s)	599
Cac8I	GCNNGC	9 cut(s)	564, 706, 1048, 1349, 1353, 1523, 1542, 1616, 1772
CaiI	CAGNNNCTG	3 cut(s)	614, 1253, 2035
CciI	TCATGA	1 cut(s)	933
CfoI	GCGC	4 cut(s)	60, 442, 451, 1242
Cfr10I	RCCGGY	1 cut(s)	71
Cfr13I	GGNCC	5 cut(s)	555, 961, 1938, 2039, 2106
ClaI	ATCGAT	1 cut(s)	207
CseI	GACGC	1 cut(s)	252
Csp6I	GTAC	3 cut(s)	286, 620, 1474
CspCI	CAANNNNNGTGG	2 cut(s)	509, 544
CviQI	GTAC	3 cut(s)	286, 620, 1474
DdeI	CTNAG	4 cut(s)	415, 443, 1845, 1947
DraI	TTTAAA	2 cut(s)	927, 1416
DriI	GACNNNNNGTC	1 cut(s)	217
EaeI	YGGCCR	2 cut(s)	73, 1433
EagI	CGGCCG	1 cut(s)	73
Eam1104I	CTCTTC	2 cut(s)	327, 1227
Eam1105I	GACNNNNNGTC	1 cut(s)	217
EarI	CTCTTC	2 cut(s)	327, 1227
Ecl136II	GAGCTC	2 cut(s)	1057, 1177
EclXI	CGGCCG	1 cut(s)	73
Eco130I	CCWWGG	7 cut(s)	147, 238, 309, 471, 645, 651, 718
Eco147I	AGGCCT	1 cut(s)	1351
Eco24I	GRGCYC	3 cut(s)	1059, 1179, 1671
Eco32I	GATATC	1 cut(s)	1162
Eco47I	GGWCC	5 cut(s)	555, 961, 1938, 2039, 2106
Eco52I	CGGCCG	1 cut(s)	73
Eco53kI	GAGCTC	2 cut(s)	1057, 1177
Eco57I	CTGAAG	2 cut(s)	308, 2012
Eco88I	CYCGRG	1 cut(s)	1167
EcoICRI	GAGCTC	2 cut(s)	1057, 1177
EcoO109I	RGGNCCY	1 cut(s)	961
EcoRI	GAATTC	1 cut(s)	870
EcoRII	CCWGG	4 cut(s)	84, 465, 639, 2034
EcoRV	GATATC	1 cut(s)	1162
EcoT14I	CCWWGG	7 cut(s)	147, 238, 309, 471, 645, 651, 718
EcoT22I	ATGCAT	4 cut(s)	307, 430, 715, 1689
EcoT38I	GRGCYC	3 cut(s)	1059, 1179, 1671
ErhI	CCWWGG	7 cut(s)	147, 238, 309, 471, 645, 651, 718
FalI	AAGNNNNNCTT	4 cut(s)	275, 307, 398, 430
FaqI	GGGAC	6 cut(s)	499, 913, 947, 1336, 2052, 2119
FbaI	TGATCA	1 cut(s)	1129
FokI	GGATG	3 cut(s)	292, 878, 1779
FriOI	GRGCYC	3 cut(s)	1059, 1179, 1671
FspBI	CTAG	7 cut(s)	458, 485, 683, 876, 884, 1226, 1878
FspI	TGCGCA	1 cut(s)	1241
GlaI	GCGC	4 cut(s)	59, 441, 450, 1241
GsuI	CTGGAG	3 cut(s)	1394, 1573, 1951
HaeII	RGCGCY	2 cut(s)	61, 452
HaeIII	GGCC	8 cut(s)	75, 164, 470, 644, 650, 1351, 1398, 1435
HapII	CCGG	2 cut(s)	72, 2109
HgaI	GACGC	1 cut(s)	252
HhaI	GCGC	4 cut(s)	60, 442, 451, 1242
Hin1I	GRCGYC	1 cut(s)	101
Hin6I	GCGC	4 cut(s)	58, 440, 449, 1240
HinP1I	GCGC	4 cut(s)	58, 440, 449, 1240
HindIII	AAGCTT	1 cut(s)	1187
HinfI	GANTC	7 cut(s)	153, 389, 750, 1426, 1807, 1988, 2080
HpaII	CCGG	2 cut(s)	72, 2109
HphI	GGTGA	6 cut(s)	61, 74, 671, 782, 998, 1148
Hpy166II	GTNNAC	2 cut(s)	288, 1901
Hpy188I	TCNGA	6 cut(s)	55, 973, 1089, 1812, 1998, 2031
Hpy8I	GTNNAC	2 cut(s)	288, 1901
Hpy99I	CGWCG	2 cut(s)	103, 106
HpyAV	CCTTC	4 cut(s)	464, 740, 1646, 1792
HpyCH4III	ACNGT	5 cut(s)	513, 539, 1010, 1505, 1981
HpyCH4IV	ACGT	2 cut(s)	101, 249
HpyF3I	CTNAG	4 cut(s)	415, 443, 1845, 1947
HpySE526I	ACGT	2 cut(s)	101, 249
Hsp92I	GRCGYC	1 cut(s)	101
HspAI	GCGC	4 cut(s)	58, 440, 449, 1240
Ksp22I	TGATCA	1 cut(s)	1129
LguI	GCTCTTC	1 cut(s)	327
LmnI	GCTCC	3 cut(s)	456, 1378, 1970
LweI	GCATC	5 cut(s)	292, 314, 820, 1674, 1757
MaeI	CTAG	7 cut(s)	458, 485, 683, 876, 884, 1226, 1878
MaeII	ACGT	2 cut(s)	101, 249
MaeIII	GTNAC	2 cut(s)	173, 851
MboII	GAAGA	8 cut(s)	314, 519, 791, 1112, 1115, 1214, 1293, 1854
MfeI	CAATTG	1 cut(s)	1672
MflI	RGATCY	3 cut(s)	234, 395, 1261
MhlI	GDGCHC	6 cut(s)	268, 492, 1059, 1179, 1564, 1671
MlyI	GAGTC	4 cut(s)	759, 1816, 1982, 2074
MmeI	TCCRAC	2 cut(s)	26, 1753
Mph1103I	ATGCAT	4 cut(s)	307, 430, 715, 1689
MslI	CAYNNNNRTG	2 cut(s)	273, 1603
MspA1I	CMGCKG	1 cut(s)	1253
MspCI	CTTAAG	2 cut(s)	1697, 1793
MspI	CCGG	2 cut(s)	72, 2109
MspR9I	CCNGG	4 cut(s)	86, 467, 641, 2036
MunI	CAATTG	1 cut(s)	1672
Mva1269I	GAATGC	1 cut(s)	947
MvaI	CCWGG	4 cut(s)	86, 467, 641, 2036
MvnI	CGCG	2 cut(s)	106, 1936
NcoI	CCATGG	3 cut(s)	309, 471, 651
NlaIV	GGNNCC	7 cut(s)	236, 556, 963, 1380, 1940, 2040, 2107
NruI	TCGCGA	1 cut(s)	106
NsbI	TGCGCA	1 cut(s)	1241
NsiI	ATGCAT	4 cut(s)	307, 430, 715, 1689
NspI	RCATGY	4 cut(s)	1287, 1514, 1573, 1618
NspV	TTCGAA	2 cut(s)	156, 980
OliI	CACNNNNGTG	1 cut(s)	1603
PaeI	GCATGC	1 cut(s)	1618
PaeR7I	CTCGAG	1 cut(s)	1167
PagI	TCATGA	1 cut(s)	933
PceI	AGGCCT	1 cut(s)	1351
PciI	ACATGT	1 cut(s)	1283
PciSI	GCTCTTC	1 cut(s)	327
PctI	GAATGC	1 cut(s)	947
PfeI	GAWTC	3 cut(s)	153, 389, 1426
PflMI	CCANNNNNTGG	2 cut(s)	472, 840
PleI	GAGTC	4 cut(s)	758, 1815, 1982, 2074
PpsI	GAGTC	4 cut(s)	758, 1815, 1982, 2074
PpuMI	RGGWCCY	1 cut(s)	961
PscI	ACATGT	1 cut(s)	1283
PshBI	ATTAAT	1 cut(s)	1629
PsiI	TTATAA	1 cut(s)	1422
Psp124BI	GAGCTC	2 cut(s)	1059, 1179
Psp5II	RGGWCCY	1 cut(s)	961
Psp6I	CCWGG	4 cut(s)	84, 465, 639, 2034
PspGI	CCWGG	4 cut(s)	84, 465, 639, 2034
PspN4I	GGNNCC	7 cut(s)	236, 556, 963, 1380, 1940, 2040, 2107
PspPI	GGNCC	5 cut(s)	555, 961, 1938, 2039, 2106
PspPPI	RGGWCCY	1 cut(s)	961
PstI	CTGCAG	4 cut(s)	619, 1218, 1258, 1840
PstNI	CAGNNNCTG	3 cut(s)	614, 1253, 2035
PsuI	RGATCY	3 cut(s)	234, 395, 1261
PvuII	CAGCTG	1 cut(s)	1253
RruI	TCGCGA	1 cut(s)	106
RsaI	GTAC	3 cut(s)	287, 621, 1475
RsaNI	GTAC	3 cut(s)	286, 620, 1474
RseI	CAYNNNNRTG	2 cut(s)	273, 1603
SacI	GAGCTC	2 cut(s)	1059, 1179
SapI	GCTCTTC	1 cut(s)	327
Sau96I	GGNCC	5 cut(s)	555, 961, 1938, 2039, 2106
ScaI	AGTACT	1 cut(s)	621
SchI	GAGTC	4 cut(s)	759, 1816, 1982, 2074
ScrFI	CCNGG	4 cut(s)	86, 467, 641, 2036
SduI	GDGCHC	6 cut(s)	268, 492, 1059, 1179, 1564, 1671
SfaNI	GCATC	5 cut(s)	292, 314, 820, 1674, 1757
SfcI	CTRYAG	4 cut(s)	615, 1214, 1254, 1836
Sfr274I	CTCGAG	1 cut(s)	1167
SfuI	TTCGAA	2 cut(s)	156, 980
SinI	GGWCC	5 cut(s)	555, 961, 1938, 2039, 2106
SlaI	CTCGAG	1 cut(s)	1167
SmiI	ATTTAAAT	1 cut(s)	927
SmiMI	CAYNNNNRTG	2 cut(s)	273, 1603
SmlI	CTYRAG	7 cut(s)	819, 860, 1016, 1167, 1400, 1697, 1793
SmoI	CTYRAG	7 cut(s)	819, 860, 1016, 1167, 1400, 1697, 1793
SphI	GCATGC	1 cut(s)	1618
SseBI	AGGCCT	1 cut(s)	1351
SsiI	CCGC	4 cut(s)	76, 945, 1489, 1936
SspI	AATATT	3 cut(s)	726, 892, 923
SspMI	CTAG	7 cut(s)	458, 485, 683, 876, 884, 1226, 1878
SstI	GAGCTC	2 cut(s)	1059, 1179
StuI	AGGCCT	1 cut(s)	1351
StyD4I	CCNGG	4 cut(s)	84, 465, 639, 2034
StyI	CCWWGG	7 cut(s)	147, 238, 309, 471, 645, 651, 718
SwaI	ATTTAAAT	1 cut(s)	927
TaaI	ACNGT	5 cut(s)	513, 539, 1010, 1505, 1981
TaiI	ACGT	2 cut(s)	104, 252
TaqI	TCGA	8 cut(s)	98, 156, 207, 499, 980, 1168, 1887, 2004
TaqII	GACCGA	1 cut(s)	2056
TatI	WGTACW	2 cut(s)	285, 619
TauI	GCSGC	1 cut(s)	78
TfiI	GAWTC	3 cut(s)	153, 389, 1426
TscAI	CASTG	7 cut(s)	580, 1057, 1389, 1508, 1605, 1853, 2099
TspDTI	ATGAA	4 cut(s)	15, 759, 769, 1139
TspGWI	ACGGA	2 cut(s)	121, 285
TspRI	CASTG	7 cut(s)	580, 1057, 1389, 1508, 1605, 1853, 2099
Van91I	CCANNNNNTGG	2 cut(s)	472, 840
Vha464I	CTTAAG	2 cut(s)	1697, 1793
VpaK11BI	GGWCC	5 cut(s)	555, 961, 1938, 2039, 2106
VspI	ATTAAT	1 cut(s)	1629
XapI	RAATTY	7 cut(s)	773, 870, 976, 1459, 1622, 1787, 2000
XbaI	TCTAGA	2 cut(s)	457, 1225
XceI	RCATGY	4 cut(s)	1287, 1514, 1573, 1618
XcmI	CCANNNNNNNNNTGG	1 cut(s)	407
XhoI	CTCGAG	1 cut(s)	1167
XspI	CTAG	7 cut(s)	458, 485, 683, 876, 884, 1226, 1878
ZraI	GACGTC	1 cut(s)	102
ZrmI	AGTACT	1 cut(s)	621
Zsp2I	ATGCAT	4 cut(s)	307, 430, 715, 1689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.