Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0014965

Physical Location & Seq

Genomic Coordinates Reverse (-)

46730683 .. 46736977

Gene Structure 6295 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00425700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGTCGGCGATGGAGATCAATAGTTCAATTTCATGCCCTTCAACTCCTCGTTGGAACTCCGAGAGGCCGTTCCTCACCGGCCGCTTCCATCAGGAAACCAAAACGACGTCGCGATTCACCGCCGCGGGTATCAAGGATTCCCATACTCTGGGATTCCAAGATGCCATTGGTTGTTACAATGCCGCTGTTCAGGAACTGATGGTCATCGATGACCTCTTGTCCGCCATGGTTGGCATCCAAGGGCGCTACATTTCCATCAAACGAGTCCGCGCAAGGGAGGATGATTTCACCTTTCAAGTTGATGCCTCCATGGATTTAGCTCTTCAGGAATTGGCCAAACGGGTGTTTCCTCTGTGCGAGAGCTTCATGCTCATCAATCAGTTTGTTGAATCAAGATCTCAGTTCAAGAATGGCTTAGTTAATCATGCCTTTGCTGCTGCACTCAGGGCCCTCCTCCTACCAATGATGGGATCTATGCAAGCACTATCCACTGTAATACTGAAAGCTTCAGCTAATAATTTTGTAGGTTCTGCAGTACTTAACCTTGTGCAGAGTCAGGCTAAGGCCATGGCTGGTGATACTGCTGTAAGGTCATTGCTAGAAAAGATGGCTGAATGTGCTAGCAATGCCTACCTGGGTATATTAGAGAGGTGGGTCTATGAAGGAGTCATTGATGATCCTTATGGTGAATTTTTCATTGCTGAGAACAAATCTCTTCAAAAGGAAAGCCTCACTCAAGATTATGATGCCAAGTATTGGAGGCAACGTTACAGCCTTAAGGATGGAATTCCTAGCTTTCTTGCAAATATTGCTGGGACAATTTTGATCACCGGAAAGTATCTAAATGTCATGAGAGAATGCGGGCACCATGTTCAGGTCCCTGTATCTGAAAATTCAAAATTGATGAGCTTTGGATCAAATCATCGTTATATCGAATGTATAAAATCTGCTTATGACTTTGCAAGCAGCGAGCTCTTAAATCTTATCAAAGAAAAGTATGATCTGATGGGAAAGCTACGATCTATAAAGCACTATCTTCTTCTGGATCAGATTGGAAAGCTTCAGTCATCTATATCAGGTCAGGTGCTAGTTCATTTTATGGATATTGCTCGGGATGAGCTTATGAAAAAGCTTGACGACATTTCTGTGGAGAAACTGCAATCTCTACTAGACCTTGCTTTGCGAACCACAGCAGCCGCAGCAGATCCCTGCCATGAGGACTTAACATGTTGTGTGGAAACATCTTCTTTGCTTAGAAGACTAGGGACACTTAAAGATCGTGAAAAGAGCAGGAATGTTCTTGATGATAATGATCTTGAGGAACCGCTGAGCTTAACTGGACTTGAGACATTTTCTTTGAATTATAAGGTTAGGTGGCCATTGTCTATAGTGATCTCTAAGAAAGCCCTAACAAAGTATCAGTTGATTTTCCGCTCCCTTTTCCACTGTAAGCATGTAGAACGCCAACTTTGTGGGGCGTGGCAAGTGCATCAGGGAGTTCGTGCCCTGAACATGCGTGGAAGTGCTATCGGCAGATCATCTCTCCTCTGTCGGAGCATGCTTAAATTTATTAATAGCCTTCTACACTATCTAACCTTTGAGGCAGGTTTTTACTTTCTTAATTGCTCCCCTTCTCACCACAGCATGGTAATAGTTGAATCTGATACCTGGCTATGCTTGCGATTGACACCTACACCCTCTGACGTTCTTGAACCCAATTGGCATGTGATGCATAATAGGCTTCAGACTGCAAAGAGCATAGATGAGGTTATCCAACACCATGACTTCTTCCTTGACAAGTGCTTGAGAGGGTGTTTGCTTCTTTTGCCTGAATTTCTCAAGAAGGTGGAGAGGCTGAAATCACTTTGCCTACAATATGCTTCAGCAACTCAATGGTTGATTAGTTCACTAGTGTCAGAGAAACCTAAGCAGTCCAGATCACGGAGCCGATGTCAAGCACTATCAATAAACTCCAGCAACACAAATTTTACTGATGCTATTCTGAAATTCGAGAGGGAGTTCAATGCAGAGCTTCAGAGCCTAGCACCAATACTGAGCAGCAGCTCCCAAGCAGAACCGTATTTGACTCATCTCGCACAGTGGATTTTGGGCATTGGAAATGATCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0007098 GO:0008092 GO:0008150 GO:0008275 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022607 GO:0031023 GO:0031109 GO:0031122 GO:0031974 GO:0031981 GO:0032153 GO:0032155 GO:0032991 GO:0034622 GO:0043015 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0051225 GO:0051258 GO:0051298 GO:0051321 GO:0051415 GO:0051418 GO:0065003 GO:0070013 GO:0070925 GO:0071840 GO:0090307 GO:0097435 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

709

Amino Acids

80.02

Weight (kDa)

8.01

Isoelectric Point (pI)

47.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	69 - 152	5.7e-12	Gamma tubulin complex component N-terminal
GCP_N_terminal	PF17681	151 - 332	1.1e-46	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	335 - 534	7.1e-36	Gamma tubulin complex component C-terminal
GCP_C_terminal	PF04130	568 - 699	3.3e-17	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17410 AT5G17410
fragaria_vesca	FvH4_6g00120
malus_domestica	MD14G1089300.v1.1
prunus_persica	Prupe.7G036600_v2.0.a1 Prupe.7G036600_v2.0.a1
pyrus_communis	pycom14g07880
rosa_chinensis	RchiOBHm_Chr3g0447481
rosa_laevigata	RLG00000025994
rosa_roxburghii	Rroxscaffold_6G00425700
rosa_rugosa	Rorug02G0602200
rosa_samantha	Rh3AG002400 Rh3BG001900 Rh3CG002200 Rh3DG002300
rosa_wichuraiana	Rw3G000130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1365
AatII	GACGTC	1 cut(s)	110
Acc36I	ACCTGC	1 cut(s)	1595
AccB1I	GGYRCC	1 cut(s)	864
AccB7I	CCANNNNNTGG	3 cut(s)	148, 756, 1645
AccBSI	CCGCTC	1 cut(s)	1434
AccII	CGCG	3 cut(s)	112, 125, 270
AclI	AACGTT	1 cut(s)	766
AclWI	GGATC	5 cut(s)	478, 671, 922, 1053, 1199
AcoI	YGGCCR	3 cut(s)	79, 333, 1376
AcsI	RAATTY	7 cut(s)	689, 786, 892, 1565, 1832, 1984, 2006
AcuI	CTGAAG	6 cut(s)	308, 492, 1046, 1727, 1866, 2018
AcyI	GRCGYC	1 cut(s)	107
AfaI	GTAC	1 cut(s)	537
AfiI	CCNNNNNNNGG	7 cut(s)	148, 274, 467, 756, 874, 1645, 1941
AflII	CTTAAG	1 cut(s)	776
AflIII	ACRYGT	1 cut(s)	1226
AhdI	GACNNNNNGTC	1 cut(s)	217
AhlI	ACTAGT	1 cut(s)	1909
AjnI	CCWGG	2 cut(s)	633, 1667
Alw21I	GWGCWC	1 cut(s)	975
Alw26I	GTCTC	1 cut(s)	1340
AlwI	GGATC	5 cut(s)	478, 671, 922, 1053, 1199
AlwNI	CAGNNNCTG	1 cut(s)	196
Ama87I	CYCGRG	1 cut(s)	1110
AoxI	GGCC	6 cut(s)	65, 79, 333, 447, 564, 1376
ApaI	GGGCCC	1 cut(s)	451
ApeKI	GCWGC	7 cut(s)	434, 437, 966, 1193, 1199, 2058, 2061
ApoI	RAATTY	7 cut(s)	689, 786, 892, 1565, 1832, 1984, 2006
ArsI	GACNNNNNNTTYG	2 cut(s)	1339, 1371
AseI	ATTAAT	1 cut(s)	1572
AspLEI	GCGC	2 cut(s)	246, 272
AspS9I	GGNCC	3 cut(s)	447, 448, 877
AsuHPI	GGTGA	7 cut(s)	67, 109, 280, 587, 698, 820, 1628
AsuNHI	GCTAGC	1 cut(s)	620
AvaI	CYCGRG	1 cut(s)	1110
AvaII	GGWCC	1 cut(s)	877
BaeGI	GKGCMC	3 cut(s)	451, 867, 1507
BaeI	ACNNNNGTAYC	2 cut(s)	570, 603
BalI	TGGCCA	2 cut(s)	335, 1378
BanI	GGYRCC	1 cut(s)	864
BanII	GRGCYC	2 cut(s)	451, 975
BbsI	GAAGAC	1 cut(s)	1264
Bbv12I	GWGCWC	1 cut(s)	975
BbvI	GCAGC	7 cut(s)	421, 424, 978, 1205, 1211, 2070, 2073
BccI	CCATC	8 cut(s)	4, 96, 193, 263, 460, 601, 776, 1000
BceAI	ACGGC	1 cut(s)	52
BciT130I	CCWGG	2 cut(s)	635, 1669
BclI	TGATCA	2 cut(s)	825, 2122
BcoDI	GTCTC	1 cut(s)	1340
BcuI	ACTAGT	1 cut(s)	1909
BfaI	CTAG	8 cut(s)	599, 621, 792, 1088, 1169, 1262, 1910, 2042
BfmI	CTRYAG	2 cut(s)	531, 1386
BfoI	RGCGCY	1 cut(s)	247
BfrI	CTTAAG	1 cut(s)	776
BfuAI	ACCTGC	1 cut(s)	1595
BglII	AGATCT	1 cut(s)	395
BlpI	GCTNAGC	1 cut(s)	1328
BmcAI	AGTACT	1 cut(s)	537
Bme1390I	CCNGG	2 cut(s)	635, 1669
Bme18I	GGWCC	1 cut(s)	877
BmeRI	GACNNNNNGTC	1 cut(s)	217
BmeT110I	CYCGRG	1 cut(s)	1110
BmgT120I	GGNCC	3 cut(s)	447, 448, 877
BmiI	GGNNCC	5 cut(s)	449, 866, 879, 1323, 1946
BmrFI	CCNGG	2 cut(s)	635, 1669
BmsI	GCATC	7 cut(s)	151, 243, 292, 736, 1498, 1719, 1984
BmtI	GCTAGC	1 cut(s)	624
BpiI	GAAGAC	1 cut(s)	1264
BpmI	CTGGAG	1 cut(s)	1957
Bpu10I	CCTNAGC	2 cut(s)	561, 1926
Bpu1102I	GCTNAGC	1 cut(s)	1328
BpuEI	CTTGAG	5 cut(s)	720, 1337, 1364, 1823, 1825
Bsa29I	ATCGAT	1 cut(s)	207
BsaBI	GATNNNNATC	3 cut(s)	14, 203, 1311
BsaHI	GRCGYC	1 cut(s)	107
BsaJI	CCNNGG	6 cut(s)	123, 225, 238, 309, 567, 634
BsaWI	WCCGGW	1 cut(s)	830
BsaXI	ACNNNNNCTCC	4 cut(s)	751, 781, 1936, 1966
Bsc4I	CCNNNNNNNGG	7 cut(s)	148, 274, 467, 756, 874, 1645, 1941
Bse118I	RCCGGY	1 cut(s)	77
Bse1I	ACTGG	1 cut(s)	1342
Bse3DI	GCAATG	3 cut(s)	593, 631, 696
Bse8I	GATNNNNATC	3 cut(s)	14, 203, 1311
BseBI	CCWGG	2 cut(s)	635, 1669
BseCI	ATCGAT	1 cut(s)	207
BseDI	CCNNGG	6 cut(s)	123, 225, 238, 309, 567, 634
BseGI	GGATG	4 cut(s)	234, 286, 787, 1120
BseJI	GATNNNNATC	3 cut(s)	14, 203, 1311
BseLI	CCNNNNNNNGG	7 cut(s)	148, 274, 467, 756, 874, 1645, 1941
BseMI	GCAATG	3 cut(s)	593, 631, 696
BseMII	CTCAG	5 cut(s)	413, 457, 693, 1319, 2045
BseNI	ACTGG	1 cut(s)	1342
BseRI	GAGGAG	3 cut(s)	36, 443, 1535
BseSI	GKGCMC	3 cut(s)	451, 867, 1507
BseX3I	CGGCCG	1 cut(s)	79
BseXI	GCAGC	7 cut(s)	421, 424, 978, 1205, 1211, 2070, 2073
BseYI	CCCAGC	1 cut(s)	812
BsgI	GTGCAG	2 cut(s)	423, 569
Bsh1236I	CGCG	3 cut(s)	112, 125, 270
Bsh1285I	CGRYCG	1 cut(s)	82
BshFI	GGCC	6 cut(s)	67, 81, 335, 449, 566, 1378
BshNI	GGYRCC	1 cut(s)	864
BshVI	ATCGAT	1 cut(s)	207
BsiEI	CGRYCG	1 cut(s)	82
BsiHKAI	GWGCWC	1 cut(s)	975
BsiHKCI	CYCGRG	1 cut(s)	1110
BsiSI	CCGG	2 cut(s)	78, 831
BslFI	GGGAC	3 cut(s)	829, 863, 1279
BslI	CCNNNNNNNGG	7 cut(s)	148, 274, 467, 756, 874, 1645, 1941
BsmAI	GTCTC	1 cut(s)	1340
BsmFI	GGGAC	3 cut(s)	829, 863, 1279
BsmI	GAATGC	1 cut(s)	863
BsnI	GGCC	6 cut(s)	67, 81, 335, 449, 566, 1378
BsoBI	CYCGRG	1 cut(s)	1110
Bsp120I	GGGCCC	1 cut(s)	447
Bsp1286I	GDGCHC	4 cut(s)	451, 867, 975, 1507
Bsp1720I	GCTNAGC	1 cut(s)	1328
Bsp19I	CCATGG	3 cut(s)	225, 309, 567
Bsp68I	TCGCGA	1 cut(s)	112
BspANI	GGCC	6 cut(s)	67, 81, 335, 449, 566, 1378
BspCNI	CTCAG	5 cut(s)	412, 456, 694, 1320, 2046
BspDI	ATCGAT	1 cut(s)	207
BspFNI	CGCG	3 cut(s)	112, 125, 270
BspHI	TCATGA	1 cut(s)	849
BspLI	GGNNCC	5 cut(s)	449, 866, 879, 1323, 1946
BspMAI	CTGCAG	1 cut(s)	535
BspMI	ACCTGC	1 cut(s)	1595
BspOI	GCTAGC	1 cut(s)	624
BspPI	GGATC	5 cut(s)	478, 671, 922, 1053, 1199
BspQI	GCTCTTC	1 cut(s)	327
BspT107I	GGYRCC	1 cut(s)	864
BspTI	CTTAAG	1 cut(s)	776
BsrBI	CCGCTC	1 cut(s)	1434
BsrDI	GCAATG	3 cut(s)	593, 631, 696
BsrFI	RCCGGY	1 cut(s)	77
BsrI	ACTGG	1 cut(s)	1342
BssAI	RCCGGY	1 cut(s)	77
BssECI	CCNNGG	6 cut(s)	123, 225, 238, 309, 567, 634
BssNI	GRCGYC	1 cut(s)	107
BssT1I	CCWWGG	4 cut(s)	225, 238, 309, 567
Bst2UI	CCWGG	2 cut(s)	635, 1669
Bst4CI	ACNGT	4 cut(s)	493, 1448, 2079, 2100
Bst6I	CTCTTC	2 cut(s)	327, 720
BstACI	GRCGYC	1 cut(s)	107
BstAFI	CTTAAG	1 cut(s)	776
BstAPI	GCANNNNNTGC	2 cut(s)	809, 1729
BstC8I	GCNNGC	7 cut(s)	480, 622, 863, 964, 971, 1559, 1679
BstDSI	CCRYGG	4 cut(s)	123, 225, 309, 567
BstF5I	GGATG	4 cut(s)	234, 286, 787, 1120
BstFNI	CGCG	3 cut(s)	112, 125, 270
BstH2I	RGCGCY	1 cut(s)	247
BstHHI	GCGC	2 cut(s)	246, 272
BstMAI	GTCTC	1 cut(s)	1340
BstMCI	CGRYCG	1 cut(s)	82
BstNI	CCWGG	2 cut(s)	635, 1669
BstNSI	RCATGY	5 cut(s)	1230, 1457, 1516, 1561, 1727
BstSCI	CCNGG	2 cut(s)	633, 1667
BstSFI	CTRYAG	2 cut(s)	531, 1386
BstSLI	GKGCMC	3 cut(s)	451, 867, 1507
BstUI	CGCG	3 cut(s)	112, 125, 270
BstV1I	GCAGC	7 cut(s)	421, 424, 978, 1205, 1211, 2070, 2073
BstV2I	GAAGAC	1 cut(s)	1264
BstX2I	RGATCY	3 cut(s)	395, 470, 1204
BstXI	CCANNNNNNTGG	1 cut(s)	1472
BstYI	RGATCY	3 cut(s)	395, 470, 1204
BstZI	CGGCCG	1 cut(s)	79
Bsu15I	ATCGAT	1 cut(s)	207
BsuRI	GGCC	6 cut(s)	67, 81, 335, 449, 566, 1378
BsuTUI	ATCGAT	1 cut(s)	207
BtgI	CCRYGG	4 cut(s)	123, 225, 309, 567
BtgZI	GCGATG	1 cut(s)	23
BtsCI	GGATG	4 cut(s)	234, 286, 787, 1120
BtsIMutI	CAGTG	3 cut(s)	489, 1444, 2105
BtuMI	TCGCGA	1 cut(s)	112
BveI	ACCTGC	1 cut(s)	1595
Cac8I	GCNNGC	7 cut(s)	480, 622, 863, 964, 971, 1559, 1679
CaiI	CAGNNNCTG	1 cut(s)	196
CciI	TCATGA	1 cut(s)	849
CfoI	GCGC	2 cut(s)	246, 272
Cfr10I	RCCGGY	1 cut(s)	77
Cfr13I	GGNCC	3 cut(s)	447, 448, 877
Cfr42I	CCGCGG	1 cut(s)	126
ClaI	ATCGAT	1 cut(s)	207
Csp6I	GTAC	1 cut(s)	536
CviQI	GTAC	1 cut(s)	536
DriI	GACNNNNNGTC	1 cut(s)	217
EaeI	YGGCCR	3 cut(s)	79, 333, 1376
EagI	CGGCCG	1 cut(s)	79
Eam1104I	CTCTTC	2 cut(s)	327, 720
Eam1105I	GACNNNNNGTC	1 cut(s)	217
EarI	CTCTTC	2 cut(s)	327, 720
EciI	GGCGGA	1 cut(s)	211
Ecl136II	GAGCTC	1 cut(s)	973
EclXI	CGGCCG	1 cut(s)	79
Eco130I	CCWWGG	4 cut(s)	225, 238, 309, 567
Eco24I	GRGCYC	2 cut(s)	451, 975
Eco47I	GGWCC	1 cut(s)	877
Eco52I	CGGCCG	1 cut(s)	79
Eco53kI	GAGCTC	1 cut(s)	973
Eco57I	CTGAAG	6 cut(s)	308, 492, 1046, 1727, 1866, 2018
Eco88I	CYCGRG	1 cut(s)	1110
EcoICRI	GAGCTC	1 cut(s)	973
EcoO109I	RGGNCCY	3 cut(s)	447, 448, 877
EcoRI	GAATTC	1 cut(s)	786
EcoRII	CCWGG	2 cut(s)	633, 1667
EcoT14I	CCWWGG	4 cut(s)	225, 238, 309, 567
EcoT22I	ATGCAT	1 cut(s)	1734
EcoT38I	GRGCYC	2 cut(s)	451, 975
ErhI	CCWWGG	4 cut(s)	225, 238, 309, 567
FalI	AAGNNNNNCTT	2 cut(s)	398, 430
FaqI	GGGAC	3 cut(s)	829, 863, 1279
FauI	CCCGC	2 cut(s)	118, 854
FbaI	TGATCA	2 cut(s)	825, 2122
FokI	GGATG	4 cut(s)	221, 293, 794, 1127
FriOI	GRGCYC	2 cut(s)	451, 975
FspBI	CTAG	8 cut(s)	599, 621, 792, 1088, 1169, 1262, 1910, 2042
GlaI	GCGC	2 cut(s)	245, 271
GsaI	CCCAGC	1 cut(s)	816
GsuI	CTGGAG	1 cut(s)	1957
HaeII	RGCGCY	1 cut(s)	247
HaeIII	GGCC	6 cut(s)	67, 81, 335, 449, 566, 1378
HapII	CCGG	2 cut(s)	78, 831
HhaI	GCGC	2 cut(s)	246, 272
Hin1I	GRCGYC	1 cut(s)	107
Hin6I	GCGC	2 cut(s)	244, 270
HinP1I	GCGC	2 cut(s)	244, 270
HindIII	AAGCTT	3 cut(s)	504, 1058, 1130
HinfI	GANTC	9 cut(s)	114, 137, 153, 264, 389, 553, 666, 1658, 2086
HpaII	CCGG	2 cut(s)	78, 831
HphI	GGTGA	7 cut(s)	67, 109, 280, 587, 698, 820, 1628
Hpy166II	GTNNAC	1 cut(s)	1907
Hpy8I	GTNNAC	1 cut(s)	1907
Hpy99I	CGWCG	2 cut(s)	109, 112
HpyAV	CCTTC	5 cut(s)	48, 656, 1589, 1641, 1837
HpyCH4III	ACNGT	4 cut(s)	493, 1448, 2079, 2100
HpyCH4IV	ACGT	3 cut(s)	107, 766, 1704
HpySE526I	ACGT	3 cut(s)	107, 766, 1704
Hsp92I	GRCGYC	1 cut(s)	107
HspAI	GCGC	2 cut(s)	244, 270
Ksp22I	TGATCA	2 cut(s)	825, 2122
KspI	CCGCGG	1 cut(s)	126
LguI	GCTCTTC	1 cut(s)	327
LmnI	GCTCC	5 cut(s)	1439, 1554, 1631, 1944, 2069
Lsp1109I	GCAGC	7 cut(s)	421, 424, 978, 1205, 1211, 2070, 2073
LweI	GCATC	7 cut(s)	151, 243, 292, 736, 1498, 1719, 1984
MaeI	CTAG	8 cut(s)	599, 621, 792, 1088, 1169, 1262, 1910, 2042
MaeII	ACGT	3 cut(s)	107, 766, 1704
MaeIII	GTNAC	2 cut(s)	173, 767
MbiI	CCGCTC	1 cut(s)	1434
MboII	GAAGA	7 cut(s)	314, 707, 1028, 1031, 1236, 1269, 1780
MfeI	CAATTG	1 cut(s)	1717
MflI	RGATCY	3 cut(s)	395, 470, 1204
MhlI	GDGCHC	4 cut(s)	451, 867, 975, 1507
MlsI	TGGCCA	2 cut(s)	335, 1378
MluNI	TGGCCA	2 cut(s)	335, 1378
MlyI	GAGTC	4 cut(s)	273, 562, 675, 2080
MmeI	TCCRAC	3 cut(s)	32, 1532, 1798
Mox20I	TGGCCA	2 cut(s)	335, 1378
Mph1103I	ATGCAT	1 cut(s)	1734
MscI	TGGCCA	2 cut(s)	335, 1378
MslI	CAYNNNNRTG	1 cut(s)	1145
Msp20I	TGGCCA	2 cut(s)	335, 1378
MspA1I	CMGCKG	3 cut(s)	125, 185, 1327
MspCI	CTTAAG	1 cut(s)	776
MspI	CCGG	2 cut(s)	78, 831
MspR9I	CCNGG	2 cut(s)	635, 1669
MunI	CAATTG	1 cut(s)	1717
Mva1269I	GAATGC	1 cut(s)	863
MvaI	CCWGG	2 cut(s)	635, 1669
MvnI	CGCG	3 cut(s)	112, 125, 270
NcoI	CCATGG	3 cut(s)	225, 309, 567
NheI	GCTAGC	1 cut(s)	620
NlaIV	GGNNCC	5 cut(s)	449, 866, 879, 1323, 1946
NruI	TCGCGA	1 cut(s)	112
NsiI	ATGCAT	1 cut(s)	1734
NspI	RCATGY	5 cut(s)	1230, 1457, 1516, 1561, 1727
PaeI	GCATGC	1 cut(s)	1561
PagI	TCATGA	1 cut(s)	849
PciI	ACATGT	1 cut(s)	1226
PciSI	GCTCTTC	1 cut(s)	327
PctI	GAATGC	1 cut(s)	863
PfeI	GAWTC	5 cut(s)	114, 137, 153, 389, 1658
PflMI	CCANNNNNTGG	3 cut(s)	148, 756, 1645
PleI	GAGTC	4 cut(s)	272, 561, 674, 2080
PpsI	GAGTC	4 cut(s)	272, 561, 674, 2080
PpuMI	RGGWCCY	1 cut(s)	877
PscI	ACATGT	1 cut(s)	1226
PshBI	ATTAAT	1 cut(s)	1572
PsiI	TTATAA	1 cut(s)	1365
Psp124BI	GAGCTC	1 cut(s)	975
Psp1406I	AACGTT	1 cut(s)	766
Psp5II	RGGWCCY	1 cut(s)	877
Psp6I	CCWGG	2 cut(s)	633, 1667
PspFI	CCCAGC	1 cut(s)	812
PspGI	CCWGG	2 cut(s)	633, 1667
PspN4I	GGNNCC	5 cut(s)	449, 866, 879, 1323, 1946
PspOMI	GGGCCC	1 cut(s)	447
PspPI	GGNCC	3 cut(s)	447, 448, 877
PspPPI	RGGWCCY	1 cut(s)	877
PstI	CTGCAG	1 cut(s)	535
PstNI	CAGNNNCTG	1 cut(s)	196
PsuI	RGATCY	3 cut(s)	395, 470, 1204
RruI	TCGCGA	1 cut(s)	112
RsaI	GTAC	1 cut(s)	537
RsaNI	GTAC	1 cut(s)	536
RseI	CAYNNNNRTG	1 cut(s)	1145
SacI	GAGCTC	1 cut(s)	975
SacII	CCGCGG	1 cut(s)	126
SapI	GCTCTTC	1 cut(s)	327
Sau96I	GGNCC	3 cut(s)	447, 448, 877
ScaI	AGTACT	1 cut(s)	537
SchI	GAGTC	4 cut(s)	273, 562, 675, 2080
ScrFI	CCNGG	2 cut(s)	635, 1669
SduI	GDGCHC	4 cut(s)	451, 867, 975, 1507
SfaNI	GCATC	7 cut(s)	151, 243, 292, 736, 1498, 1719, 1984
SfcI	CTRYAG	2 cut(s)	531, 1386
Sfr303I	CCGCGG	1 cut(s)	126
SgrBI	CCGCGG	1 cut(s)	126
SinI	GGWCC	1 cut(s)	877
SmiMI	CAYNNNNRTG	1 cut(s)	1145
SmlI	CTYRAG	6 cut(s)	735, 776, 1316, 1343, 1804, 1838
SmoI	CTYRAG	6 cut(s)	735, 776, 1316, 1343, 1804, 1838
SpeI	ACTAGT	1 cut(s)	1909
SphI	GCATGC	1 cut(s)	1561
SspI	AATATT	1 cut(s)	808
SspMI	CTAG	8 cut(s)	599, 621, 792, 1088, 1169, 1262, 1910, 2042
SstI	GAGCTC	1 cut(s)	975
StyD4I	CCNGG	2 cut(s)	633, 1667
StyI	CCWWGG	4 cut(s)	225, 238, 309, 567
TaaI	ACNGT	4 cut(s)	493, 1448, 2079, 2100
TaiI	ACGT	3 cut(s)	110, 769, 1707
TaqI	TCGA	3 cut(s)	207, 933, 2010
TatI	WGTACW	1 cut(s)	535
TauI	GCSGC	4 cut(s)	84, 125, 185, 1199
TfiI	GAWTC	5 cut(s)	114, 137, 153, 389, 1658
TscAI	CASTG	3 cut(s)	496, 1451, 2105
TseI	GCWGC	7 cut(s)	434, 437, 966, 1193, 1199, 2058, 2061
TspDTI	ATGAA	6 cut(s)	21, 355, 675, 685, 1082, 1139
TspGWI	ACGGA	1 cut(s)	1957
TspRI	CASTG	3 cut(s)	496, 1451, 2105
Van91I	CCANNNNNTGG	3 cut(s)	148, 756, 1645
Vha464I	CTTAAG	1 cut(s)	776
VpaK11BI	GGWCC	1 cut(s)	877
VspI	ATTAAT	1 cut(s)	1572
XapI	RAATTY	7 cut(s)	689, 786, 892, 1565, 1832, 1984, 2006
XceI	RCATGY	5 cut(s)	1230, 1457, 1516, 1561, 1727
XcmI	CCANNNNNNNNNTGG	1 cut(s)	164
XspI	CTAG	8 cut(s)	599, 621, 792, 1088, 1169, 1262, 1910, 2042
ZraI	GACGTC	1 cut(s)	108
ZrmI	AGTACT	1 cut(s)	537
Zsp2I	ATGCAT	1 cut(s)	1734

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.