Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0014965

Physical Location & Seq

Genomic Coordinates Reverse (-)

113642 .. 119434

Gene Structure 5793 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g00120.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGTCGGCGATGGAGATCAACAGTTCAAGCTCATGCCCTTCAACTCCTCGTTGGAACTCCGAGAGGCCGTTCCTCACCGGCCGCTTCCATCAGGAAACCAAAACGACGTCGCGTTTCGCCGCCGAGACCCAAACTGAAGACGCCATAGGGTGTCACAATGCGGCTGTTCAGGAACTGGTGGTGATCGACGACCTCTTGTCGGCCATGGTCGGCATCCAAGGCCGCTACATTTCCATCAGAAGACTCCGCGGGAAGGAAGATGGTTTCATCTTTCAAGTTGACGCCTCGATGGATTTGGCTCTTCAGGAACTGGCCCACCGGGTGTTCCCTCTTTGCGAGAGCTTCATGCTCATCAATCAGTTTGTCGAGTCGAGATCTCAGTTCAAGAATGGCTTAGTTAATCATGCCTTTGCTGCTGCTCTCCGGGCTCTCCTCCTTGATTACCAGGCTATGGTGGCACAGCTTGAACACCAATTTCGTCTCGGAAGACTGTCCTTACAAGGCTTGTGGTATTATTGTCAGCCAATGATGGGATCTATGAAAGCACTGTCCACTGTAATACAGAAAGCTTCCGCAAATAATTTTGCCGGTTCTGCAGTTCTTAACCTTGTACAGAGTCAGGCTAAGGCCATGGCTGGTGATACTGCTGTAAGGTCATTGCTAGAGAAGATGGCTGAATGTGCTAGCAATGCGTACCTGGGTATATTAGAGAGGTGGGTCTATGAAGGAGTCATTGATGATCCTTACAGTGAATTTTTCATTGCTGAGAACAAATCTCTTCAGAAGGAAAGCCTCACTCAAGATTATGATGCCAAGTATTGGAGGCAACGTTACAGCCTTAAGGATGGAATTCCAAGCTTTCTTGCAAATATTGCTGGGACAATTTTGATCACCGGAAAATATCTAAATGTCATGAGAGAATGTGGGCACCATGTTCAGGTCCCTGTATCCGAAAATTCGAAATTGATGAGCTTTGGATCAAATCATCGTTATATTGAGTGTATAAAATCTGCTTATGACTTTGCCAGCGGCGAGCTCTTAAATCTTATCAAAGAAAAGTATGATCTGATGGGAAAGCTACGATCTATAAAGCACTATCTTCTTCTTGATCAGGGTGACTTTTTAGTTCATTTTATGGATATTGCTCGGGATGAGCTTATGAAAAAGCTCGATGACATTTCTGTAGAGAAACTGCAATCCCTACTAGACCTTGCTTTGCGAACCACAGCAGCTGCAGCAGATCCCTGCCATGAGGACTTAACATGTTGTGTGGAAACATCTTCTTTGCTTAGAAGACTAGGGACACTTAAAGATCGTGAAAAGACCAGGAATGTCCTTGATGATAATGATCTAGAGGAACCAGTGAGCTTAACTGGACTCGAGACATTTTCTTTGAATTATAAGGTTAGGTGGCCGTTGTCTATAGTGATCTGTAAGAAAGCCGTAACAAAGTATCAGTTGATTTTCCGCTTCCTTTTCCACTGTAAGCATGTAGAACGCCAACTTTGTGGGGCTTGGCAAGTGCATCAGGGAGTTCGTACCCTGAACGTGCGTGGTTCTGCTATCGGCAGATCATCTCTCCTCTGCCGGAGCATGCTTAAATTTATTAACAGCCTTCTACACTATCTAACATTTGAGGTTCTTGAACCCATTTGGCATGTGATGCATAATAGGCTTCAGACTGCAAAGAGCATAGATGAGGTTATCCAACACCATGACTTCTTCCTTGACAAGTGCTTGAGAGGATGTTTGCTGCTTTTGCCTGAATTTCTGAAGAAGGTAGAGAGGCTGAAATCACTTTGCCTACAATATGCTTCAGCAACTCAGTGGTTGATAAGTTCTCTTCAGTCAGAAAAACCTAAGCCATCCAAATCACGGAGCCGATGTCAGGCACTATCAATAAGCTCCAGCAACCCAAATTTTACTGATGCTATTCTCAAATTCGAGAGGGAGTTCAATGCGGAGCTTCAGAGCCTAGCACCAATACTGAGCAGCAGTTCCCAAGCCGAACCGTATTTAACTCATCTTGCACAATGGATTTTGGGCACTGGAAATGATCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0000278 GO:0000280 GO:0000923 GO:0000930 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0007051 GO:0007052 GO:0007098 GO:0008092 GO:0008150 GO:0008275 GO:0009987 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022414 GO:0022607 GO:0031023 GO:0031109 GO:0031122 GO:0031974 GO:0031981 GO:0032153 GO:0032155 GO:0032991 GO:0034622 GO:0043015 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044450 GO:0044464 GO:0046785 GO:0048285 GO:0051225 GO:0051258 GO:0051298 GO:0051321 GO:0051415 GO:0051418 GO:0065003 GO:0070013 GO:0070925 GO:0071840 GO:0090307 GO:0097435 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

688

Amino Acids

77.88

Weight (kDa)

7.81

Isoelectric Point (pI)

46.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	62 - 353	5.2e-78	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	356 - 677	5.4e-66	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17410 AT5G17410
fragaria_vesca	FvH4_6g00120
malus_domestica	MD14G1089300.v1.1
prunus_persica	Prupe.7G036600_v2.0.a1 Prupe.7G036600_v2.0.a1
pyrus_communis	pycom14g07880
rosa_chinensis	RchiOBHm_Chr3g0447481
rosa_laevigata	RLG00000025994
rosa_roxburghii	Rroxscaffold_6G00425700
rosa_rugosa	Rorug02G0602200
rosa_samantha	Rh3AG002400 Rh3BG001900 Rh3CG002200 Rh3DG002300
rosa_wichuraiana	Rw3G000130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1401
AatII	GACGTC	1 cut(s)	110
AccB1I	GGYRCC	1 cut(s)	927
AccB7I	CCANNNNNTGG	2 cut(s)	451, 819
AccII	CGCG	2 cut(s)	112, 249
AclI	AACGTT	1 cut(s)	829
AclWI	GGATC	4 cut(s)	541, 734, 985, 1235
AcoI	YGGCCR	3 cut(s)	79, 201, 1412
AcsI	RAATTY	7 cut(s)	752, 849, 955, 1601, 1766, 1918, 1940
AcuI	CTGAAG	8 cut(s)	156, 287, 764, 1661, 1793, 1800, 1829, 1952
AcyI	GRCGYC	3 cut(s)	107, 141, 282
AdeI	CACNNNGTG	1 cut(s)	322
AfaI	GTAC	3 cut(s)	612, 695, 1540
AfiI	CCNNNNNNNGG	8 cut(s)	199, 253, 451, 530, 819, 937, 1875, 1888
AflII	CTTAAG	1 cut(s)	839
AflIII	ACRYGT	1 cut(s)	1262
AgsI	TTSAA	8 cut(s)	27, 42, 275, 385, 467, 1396, 1646, 1957
AhdI	GACNNNNNGTC	1 cut(s)	196
AjnI	CCWGG	3 cut(s)	444, 696, 1325
Alw21I	GWGCWC	1 cut(s)	1038
Alw26I	GTCTC	3 cut(s)	119, 485, 1376
AlwI	GGATC	4 cut(s)	541, 734, 985, 1235
AlwNI	CAGNNNCTG	3 cut(s)	175, 310, 1232
Ama87I	CYCGRG	2 cut(s)	1146, 1379
AoxI	GGCC	7 cut(s)	65, 79, 201, 220, 312, 627, 1412
ApeKI	GCWGC	7 cut(s)	413, 416, 1229, 1232, 1235, 1753, 1992
ApoI	RAATTY	7 cut(s)	752, 849, 955, 1601, 1766, 1918, 1940
ArsI	GACNNNNNNTTYG	2 cut(s)	1375, 1407
AspS9I	GGNCC	2 cut(s)	313, 940
AsuC2I	CCSGG	2 cut(s)	320, 425
AsuHPI	GGTGA	5 cut(s)	67, 193, 650, 883, 1127
AsuII	TTCGAA	1 cut(s)	959
AsuNHI	GCTAGC	1 cut(s)	683
AvaI	CYCGRG	2 cut(s)	1146, 1379
AvaII	GGWCC	1 cut(s)	940
BaeGI	GKGCMC	2 cut(s)	930, 2048
BaeI	ACNNNNGTAYC	2 cut(s)	633, 666
BanI	GGYRCC	1 cut(s)	927
BanII	GRGCYC	2 cut(s)	430, 1038
BbsI	GAAGAC	4 cut(s)	144, 247, 493, 1300
Bbv12I	GWGCWC	1 cut(s)	1038
BbvI	GCAGC	7 cut(s)	400, 403, 1219, 1241, 1247, 1740, 2004
BceAI	ACGGC	3 cut(s)	52, 1399, 1427
BciT130I	CCWGG	3 cut(s)	446, 698, 1327
BciVI	GTATCC	1 cut(s)	958
BclI	TGATCA	3 cut(s)	888, 1108, 2056
BcnI	CCSGG	2 cut(s)	320, 425
BcoDI	GTCTC	3 cut(s)	119, 485, 1376
BfaI	CTAG	6 cut(s)	662, 684, 1205, 1298, 1352, 1976
BfmI	CTRYAG	4 cut(s)	594, 1182, 1233, 1422
BfrI	CTTAAG	1 cut(s)	839
BfuI	GTATCC	1 cut(s)	958
BglII	AGATCT	1 cut(s)	374
Bme1390I	CCNGG	5 cut(s)	320, 425, 446, 698, 1327
Bme18I	GGWCC	1 cut(s)	940
BmeRI	GACNNNNNGTC	1 cut(s)	196
BmeT110I	CYCGRG	2 cut(s)	1146, 1379
BmgT120I	GGNCC	2 cut(s)	313, 940
BmiI	GGNNCC	4 cut(s)	929, 942, 1359, 1880
BmrFI	CCNGG	5 cut(s)	320, 425, 446, 698, 1327
BmsI	GCATC	5 cut(s)	222, 799, 1534, 1653, 1918
BmtI	GCTAGC	1 cut(s)	687
BpiI	GAAGAC	4 cut(s)	144, 247, 493, 1300
BpmI	CTGGAG	1 cut(s)	1891
Bpu10I	CCTNAGC	2 cut(s)	624, 1860
Bpu14I	TTCGAA	1 cut(s)	959
BpuEI	CTTGAG	2 cut(s)	783, 1759
BpuMI	CCSGG	2 cut(s)	320, 425
BsaBI	GATNNNNATC	2 cut(s)	14, 1347
BsaHI	GRCGYC	3 cut(s)	107, 141, 282
BsaI	GGTCTC	1 cut(s)	119
BsaJI	CCNNGG	5 cut(s)	204, 217, 247, 630, 697
BsaWI	WCCGGW	1 cut(s)	893
BsaXI	ACNNNNNCTCC	4 cut(s)	814, 844, 1870, 1900
Bsc4I	CCNNNNNNNGG	8 cut(s)	199, 253, 451, 530, 819, 937, 1875, 1888
Bse118I	RCCGGY	2 cut(s)	77, 587
Bse1I	ACTGG	5 cut(s)	180, 315, 1361, 1378, 2053
Bse3DI	GCAATG	3 cut(s)	656, 694, 759
Bse8I	GATNNNNATC	2 cut(s)	14, 1347
BseBI	CCWGG	3 cut(s)	446, 698, 1327
BseDI	CCNNGG	5 cut(s)	204, 217, 247, 630, 697
BseGI	GGATG	5 cut(s)	213, 850, 1156, 1751, 1865
BseJI	GATNNNNATC	2 cut(s)	14, 1347
BseLI	CCNNNNNNNGG	8 cut(s)	199, 253, 451, 530, 819, 937, 1875, 1888
BseMI	GCAATG	3 cut(s)	656, 694, 759
BseMII	CTCAG	4 cut(s)	392, 756, 1838, 1979
BseNI	ACTGG	5 cut(s)	180, 315, 1361, 1378, 2053
BseRI	GAGGAG	3 cut(s)	36, 422, 1571
BseSI	GKGCMC	2 cut(s)	930, 2048
BseX3I	CGGCCG	1 cut(s)	79
BseXI	GCAGC	7 cut(s)	400, 403, 1219, 1241, 1247, 1740, 2004
BseYI	CCCAGC	1 cut(s)	875
Bsh1236I	CGCG	2 cut(s)	112, 249
Bsh1285I	CGRYCG	1 cut(s)	82
BshFI	GGCC	7 cut(s)	67, 81, 203, 222, 314, 629, 1414
BshNI	GGYRCC	1 cut(s)	927
BsiEI	CGRYCG	1 cut(s)	82
BsiHKAI	GWGCWC	1 cut(s)	1038
BsiHKCI	CYCGRG	2 cut(s)	1146, 1379
BsiSI	CCGG	6 cut(s)	78, 319, 424, 588, 894, 1588
BslFI	GGGAC	3 cut(s)	892, 926, 1315
BslI	CCNNNNNNNGG	8 cut(s)	199, 253, 451, 530, 819, 937, 1875, 1888
BsmAI	GTCTC	3 cut(s)	119, 485, 1376
BsmBI	CGTCTC	1 cut(s)	485
BsmFI	GGGAC	3 cut(s)	892, 926, 1315
BsnI	GGCC	7 cut(s)	67, 81, 203, 222, 314, 629, 1414
Bso31I	GGTCTC	1 cut(s)	119
BsoBI	CYCGRG	2 cut(s)	1146, 1379
Bsp119I	TTCGAA	1 cut(s)	959
Bsp1286I	GDGCHC	4 cut(s)	430, 930, 1038, 2048
Bsp1407I	TGTACA	1 cut(s)	610
Bsp19I	CCATGG	2 cut(s)	204, 630
BspANI	GGCC	7 cut(s)	67, 81, 203, 222, 314, 629, 1414
BspCNI	CTCAG	4 cut(s)	391, 757, 1837, 1980
BspFNI	CGCG	2 cut(s)	112, 249
BspHI	TCATGA	1 cut(s)	912
BspLI	GGNNCC	4 cut(s)	929, 942, 1359, 1880
BspMAI	CTGCAG	2 cut(s)	598, 1237
BspOI	GCTAGC	1 cut(s)	687
BspPI	GGATC	4 cut(s)	541, 734, 985, 1235
BspQI	GCTCTTC	1 cut(s)	306
BspT104I	TTCGAA	1 cut(s)	959
BspT107I	GGYRCC	1 cut(s)	927
BspTI	CTTAAG	1 cut(s)	839
BspTNI	GGTCTC	1 cut(s)	119
BsrDI	GCAATG	3 cut(s)	656, 694, 759
BsrFI	RCCGGY	2 cut(s)	77, 587
BsrGI	TGTACA	1 cut(s)	610
BsrI	ACTGG	5 cut(s)	180, 315, 1361, 1378, 2053
BssAI	RCCGGY	2 cut(s)	77, 587
BssECI	CCNNGG	5 cut(s)	204, 217, 247, 630, 697
BssNI	GRCGYC	3 cut(s)	107, 141, 282
BssT1I	CCWWGG	3 cut(s)	204, 217, 630
Bst2UI	CCWGG	3 cut(s)	446, 698, 1327
Bst4CI	ACNGT	7 cut(s)	23, 492, 549, 556, 749, 1484, 2013
Bst6I	CTCTTC	3 cut(s)	306, 783, 1848
BstACI	GRCGYC	3 cut(s)	107, 141, 282
BstAFI	CTTAAG	1 cut(s)	839
BstAPI	GCANNNNNTGC	2 cut(s)	872, 1663
BstAUI	TGTACA	1 cut(s)	610
BstBI	TTCGAA	1 cut(s)	959
BstC8I	GCNNGC	4 cut(s)	685, 1027, 1034, 1595
BstDEI	CTNAG	8 cut(s)	378, 394, 624, 765, 1289, 1824, 1860, 1988
BstDSI	CCRYGG	3 cut(s)	204, 247, 630
BstF5I	GGATG	5 cut(s)	213, 850, 1156, 1751, 1865
BstFNI	CGCG	2 cut(s)	112, 249
BstMAI	GTCTC	3 cut(s)	119, 485, 1376
BstMCI	CGRYCG	1 cut(s)	82
BstNI	CCWGG	3 cut(s)	446, 698, 1327
BstNSI	RCATGY	4 cut(s)	1266, 1493, 1597, 1661
BstSCI	CCNGG	5 cut(s)	318, 423, 444, 696, 1325
BstSFI	CTRYAG	4 cut(s)	594, 1182, 1233, 1422
BstSLI	GKGCMC	2 cut(s)	930, 2048
BstUI	CGCG	2 cut(s)	112, 249
BstV1I	GCAGC	7 cut(s)	400, 403, 1219, 1241, 1247, 1740, 2004
BstV2I	GAAGAC	4 cut(s)	144, 247, 493, 1300
BstX2I	RGATCY	3 cut(s)	374, 533, 1240
BstXI	CCANNNNNNTGG	1 cut(s)	1508
BstYI	RGATCY	3 cut(s)	374, 533, 1240
BstZI	CGGCCG	1 cut(s)	79
BsuI	GTATCC	1 cut(s)	958
BsuRI	GGCC	7 cut(s)	67, 81, 203, 222, 314, 629, 1414
BtgI	CCRYGG	3 cut(s)	204, 247, 630
BtgZI	GCGATG	1 cut(s)	23
BtsCI	GGATG	5 cut(s)	213, 850, 1156, 1751, 1865
BtsIMutI	CAGTG	7 cut(s)	545, 552, 754, 1368, 1480, 1832, 2046
Cac8I	GCNNGC	4 cut(s)	685, 1027, 1034, 1595
CaiI	CAGNNNCTG	3 cut(s)	175, 310, 1232
CciI	TCATGA	1 cut(s)	912
Cfr10I	RCCGGY	2 cut(s)	77, 587
Cfr13I	GGNCC	2 cut(s)	313, 940
Cfr42I	CCGCGG	1 cut(s)	250
CseI	GACGC	2 cut(s)	149, 290
Csp6I	GTAC	3 cut(s)	611, 694, 1539
CspCI	CAANNNNNGTGG	2 cut(s)	488, 523
CviQI	GTAC	3 cut(s)	611, 694, 1539
DdeI	CTNAG	8 cut(s)	378, 394, 624, 765, 1289, 1824, 1860, 1988
DraIII	CACNNNGTG	1 cut(s)	322
DriI	GACNNNNNGTC	1 cut(s)	196
EaeI	YGGCCR	3 cut(s)	79, 201, 1412
EagI	CGGCCG	1 cut(s)	79
Eam1104I	CTCTTC	3 cut(s)	306, 783, 1848
Eam1105I	GACNNNNNGTC	1 cut(s)	196
EarI	CTCTTC	3 cut(s)	306, 783, 1848
Ecl136II	GAGCTC	1 cut(s)	1036
EclXI	CGGCCG	1 cut(s)	79
Eco130I	CCWWGG	3 cut(s)	204, 217, 630
Eco24I	GRGCYC	2 cut(s)	430, 1038
Eco31I	GGTCTC	1 cut(s)	119
Eco47I	GGWCC	1 cut(s)	940
Eco52I	CGGCCG	1 cut(s)	79
Eco53kI	GAGCTC	1 cut(s)	1036
Eco57I	CTGAAG	8 cut(s)	156, 287, 764, 1661, 1793, 1800, 1829, 1952
Eco88I	CYCGRG	2 cut(s)	1146, 1379
EcoICRI	GAGCTC	1 cut(s)	1036
EcoO109I	RGGNCCY	1 cut(s)	940
EcoRI	GAATTC	1 cut(s)	849
EcoRII	CCWGG	3 cut(s)	444, 696, 1325
EcoT14I	CCWWGG	3 cut(s)	204, 217, 630
EcoT22I	ATGCAT	1 cut(s)	1668
EcoT38I	GRGCYC	2 cut(s)	430, 1038
ErhI	CCWWGG	3 cut(s)	204, 217, 630
Esp3I	CGTCTC	1 cut(s)	485
FalI	AAGNNNNNCTT	2 cut(s)	377, 409
FaqI	GGGAC	3 cut(s)	892, 926, 1315
FauI	CCCGC	1 cut(s)	242
FbaI	TGATCA	3 cut(s)	888, 1108, 2056
FokI	GGATG	5 cut(s)	200, 857, 1163, 1758, 1852
FriOI	GRGCYC	2 cut(s)	430, 1038
FspBI	CTAG	6 cut(s)	662, 684, 1205, 1298, 1352, 1976
GsaI	CCCAGC	1 cut(s)	879
GsuI	CTGGAG	1 cut(s)	1891
HaeIII	GGCC	7 cut(s)	67, 81, 203, 222, 314, 629, 1414
HapII	CCGG	6 cut(s)	78, 319, 424, 588, 894, 1588
HgaI	GACGC	2 cut(s)	149, 290
Hin1I	GRCGYC	3 cut(s)	107, 141, 282
HincII	GTYRAC	1 cut(s)	280
HindII	GTYRAC	1 cut(s)	280
HindIII	AAGCTT	2 cut(s)	567, 856
HinfI	GANTC	5 cut(s)	243, 368, 616, 729, 1377
HpaII	CCGG	6 cut(s)	78, 319, 424, 588, 894, 1588
HphI	GGTGA	5 cut(s)	67, 193, 650, 883, 1127
Hpy166II	GTNNAC	2 cut(s)	280, 552
Hpy8I	GTNNAC	2 cut(s)	280, 552
Hpy99I	CGWCG	3 cut(s)	109, 112, 191
HpyAV	CCTTC	6 cut(s)	48, 247, 719, 778, 1625, 1771
HpyCH4III	ACNGT	7 cut(s)	23, 492, 549, 556, 749, 1484, 2013
HpyCH4IV	ACGT	3 cut(s)	107, 829, 1548
HpyCH4V	TGCA	8 cut(s)	596, 866, 1195, 1235, 1525, 1666, 1685, 2030
HpyF3I	CTNAG	8 cut(s)	378, 394, 624, 765, 1289, 1824, 1860, 1988
HpySE526I	ACGT	3 cut(s)	107, 829, 1548
Hsp92I	GRCGYC	3 cut(s)	107, 141, 282
Ksp22I	TGATCA	3 cut(s)	888, 1108, 2056
KspI	CCGCGG	1 cut(s)	250
LguI	GCTCTTC	1 cut(s)	306
LmnI	GCTCC	4 cut(s)	1590, 1878, 1910, 1963
Lsp1109I	GCAGC	7 cut(s)	400, 403, 1219, 1241, 1247, 1740, 2004
LweI	GCATC	5 cut(s)	222, 799, 1534, 1653, 1918
MaeI	CTAG	6 cut(s)	662, 684, 1205, 1298, 1352, 1976
MaeII	ACGT	3 cut(s)	107, 829, 1548
MaeIII	GTNAC	4 cut(s)	152, 830, 1115, 1444
MflI	RGATCY	3 cut(s)	374, 533, 1240
MhlI	GDGCHC	4 cut(s)	430, 930, 1038, 2048
MlyI	GAGTC	5 cut(s)	237, 377, 625, 738, 1371
MmeI	TCCRAC	2 cut(s)	32, 1732
Mph1103I	ATGCAT	1 cut(s)	1668
MspA1I	CMGCKG	3 cut(s)	249, 1029, 1232
MspCI	CTTAAG	1 cut(s)	839
MspI	CCGG	6 cut(s)	78, 319, 424, 588, 894, 1588
MspR9I	CCNGG	5 cut(s)	320, 425, 446, 698, 1327
MvaI	CCWGG	3 cut(s)	446, 698, 1327
MvnI	CGCG	2 cut(s)	112, 249
NciI	CCSGG	2 cut(s)	320, 425
NcoI	CCATGG	2 cut(s)	204, 630
NheI	GCTAGC	1 cut(s)	683
NlaIV	GGNNCC	4 cut(s)	929, 942, 1359, 1880
NmeAIII	GCCGAG	1 cut(s)	148
NmuCI	GTSAC	2 cut(s)	152, 1115
NsiI	ATGCAT	1 cut(s)	1668
NspI	RCATGY	4 cut(s)	1266, 1493, 1597, 1661
NspV	TTCGAA	1 cut(s)	959
PaeI	GCATGC	1 cut(s)	1597
PaeR7I	CTCGAG	1 cut(s)	1379
PagI	TCATGA	1 cut(s)	912
PciI	ACATGT	1 cut(s)	1262
PciSI	GCTCTTC	1 cut(s)	306
PflMI	CCANNNNNTGG	2 cut(s)	451, 819
PleI	GAGTC	5 cut(s)	237, 376, 624, 737, 1371
PpsI	GAGTC	5 cut(s)	237, 376, 624, 737, 1371
PpuMI	RGGWCCY	1 cut(s)	940
PscI	ACATGT	1 cut(s)	1262
PsiI	TTATAA	1 cut(s)	1401
Psp124BI	GAGCTC	1 cut(s)	1038
Psp1406I	AACGTT	1 cut(s)	829
Psp5II	RGGWCCY	1 cut(s)	940
Psp6I	CCWGG	3 cut(s)	444, 696, 1325
PspFI	CCCAGC	1 cut(s)	875
PspGI	CCWGG	3 cut(s)	444, 696, 1325
PspN4I	GGNNCC	4 cut(s)	929, 942, 1359, 1880
PspPI	GGNCC	2 cut(s)	313, 940
PspPPI	RGGWCCY	1 cut(s)	940
PstI	CTGCAG	2 cut(s)	598, 1237
PstNI	CAGNNNCTG	3 cut(s)	175, 310, 1232
PsuI	RGATCY	3 cut(s)	374, 533, 1240
PvuII	CAGCTG	1 cut(s)	1232
RsaI	GTAC	3 cut(s)	612, 695, 1540
RsaNI	GTAC	3 cut(s)	611, 694, 1539
SacI	GAGCTC	1 cut(s)	1038
SacII	CCGCGG	1 cut(s)	250
SapI	GCTCTTC	1 cut(s)	306
Sau96I	GGNCC	2 cut(s)	313, 940
SchI	GAGTC	5 cut(s)	237, 377, 625, 738, 1371
ScrFI	CCNGG	5 cut(s)	320, 425, 446, 698, 1327
SduI	GDGCHC	4 cut(s)	430, 930, 1038, 2048
SfaNI	GCATC	5 cut(s)	222, 799, 1534, 1653, 1918
SfcI	CTRYAG	4 cut(s)	594, 1182, 1233, 1422
Sfr274I	CTCGAG	1 cut(s)	1379
Sfr303I	CCGCGG	1 cut(s)	250
SfuI	TTCGAA	1 cut(s)	959
SgrBI	CCGCGG	1 cut(s)	250
SinI	GGWCC	1 cut(s)	940
SlaI	CTCGAG	1 cut(s)	1379
SmlI	CTYRAG	4 cut(s)	798, 839, 1379, 1738
SmoI	CTYRAG	4 cut(s)	798, 839, 1379, 1738
SphI	GCATGC	1 cut(s)	1597
SspI	AATATT	1 cut(s)	871
SspMI	CTAG	6 cut(s)	662, 684, 1205, 1298, 1352, 1976
SstI	GAGCTC	1 cut(s)	1038
StyD4I	CCNGG	5 cut(s)	318, 423, 444, 696, 1325
StyI	CCWWGG	3 cut(s)	204, 217, 630
TaaI	ACNGT	7 cut(s)	23, 492, 549, 556, 749, 1484, 2013
TaiI	ACGT	3 cut(s)	110, 832, 1551
TaqI	TCGA	8 cut(s)	186, 287, 366, 371, 959, 1170, 1380, 1944
TatI	WGTACW	1 cut(s)	610
TauI	GCSGC	5 cut(s)	84, 122, 164, 225, 1032
TscAI	CASTG	7 cut(s)	552, 559, 754, 1368, 1487, 1832, 2053
TseFI	GTSAC	2 cut(s)	152, 1115
TseI	GCWGC	7 cut(s)	413, 416, 1229, 1232, 1235, 1753, 1992
Tsp45I	GTSAC	2 cut(s)	152, 1115
TspDTI	ATGAA	7 cut(s)	256, 334, 554, 738, 748, 1118, 1175
TspGWI	ACGGA	1 cut(s)	1891
TspRI	CASTG	7 cut(s)	552, 559, 754, 1368, 1487, 1832, 2053
Van91I	CCANNNNNTGG	2 cut(s)	451, 819
Vha464I	CTTAAG	1 cut(s)	839
VpaK11BI	GGWCC	1 cut(s)	940
XapI	RAATTY	7 cut(s)	752, 849, 955, 1601, 1766, 1918, 1940
XbaI	TCTAGA	1 cut(s)	1351
XceI	RCATGY	4 cut(s)	1266, 1493, 1597, 1661
XhoI	CTCGAG	1 cut(s)	1379
XspI	CTAG	6 cut(s)	662, 684, 1205, 1298, 1352, 1976
ZraI	GACGTC	1 cut(s)	108
Zsp2I	ATGCAT	1 cut(s)	1668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.