AT5G19220

This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
6463824 .. 6466831
3008 bp
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UTR
Exon/CDS
Intron
AT5G19220.1

Sequence Viewer

Length: 1569 bp
ATGGTGGTCTCTGCTGACTGCAGAATCTCCCTCTCTGCCCCTAGCTGCATACGTAGTAGCTCCACGGGATTGACTAGGCACATTAAGCTTGGCAGCTTCTGCAATGGTGAGCTCATGGGGAAGAAGCTCAACTTGTCTCAGCTTCCAAACATTCGTCTTCGATCTTCTACTAACTTCTCTCAGAAGAGAATTTTAATGTCTCTAAATAGTGTAGCTGGGGAGAGTAAGGTACAAGAACTTGAGACTGAGAAAAGGGATCCAAGGACAGTTGCTTCCATTATTCTTGGAGGTGGAGCAGGAACTCGACTCTTTCCTCTCACAAAACGCCGCGCCAAGCCTGCCGTTCCTATCGGGGGAGCCTATAGGTTGATAGATGTACCAATGAGCAATTGTATTAACAGCGGAATCAACAAAGTCTACATACTCACACAATATAACTCAGCATCATTGAACAGGCATTTAGCCCGTGCTTACAACTCCAATGGACTTGGCTTTGGAGATGGCTATGTTGAGGTTCTTGCGGCCACTCAAACGCCAGGAGAATCTGGTAAAAGGTGGTTCCAAGGTACAGCAGATGCGGTTCGGCAATTCCATTGGCTTTTCGAGGATGCAAGAAGCAAGGACATAGAGGATGTATTGATCCTTTCTGGAGATCACCTCTACAGGATGGATTACATGGATTTTATACAGGATCATCGGCAGAGTGGCGCGGATATAAGCATTTCCTGCATACCAATAGATGACAGACGTGCCTCAGATTTTGGGCTTATGAAGATAGATGACAAAGGAAGAGTTATCTCATTCAGTGAAAAACCTAAAGGAGACGACCTGAAAGCAATGGCAGTAGACACAACTATTTTAGGACTTTCCAAGGAGGAAGCTGAAAAGAAACCATACATAGCTTCAATGGGAGTTTATGTTTTCAAAAAAGAAATACTGTTAAATCTCTTGAGATGGCGTTTCCCCACAGCAAACGACTTTGGTTCAGAGATTATACCCTTCTCAGCTAAAGAATTCTATGTGAATGCTTATCTCTTTAATGACTACTGGGAAGATATAGGAACAATAAGATCTTTCTTCGAGGCGAATCTTGCACTCACTGAGCATCCTGGGGCATTTAGTTTCTACGACGCGGCAAAACCAATATATACATCAAGGAGAAACCTGCCACCATCAAAAATAGACAACTCTAAGCTCATCGATTCAATCATTTCTCATGGAAGCTTCTTAACCAACTGCTTGATTGAGCATAGCATTGTGGGAATTAGATCAAGAGTAGGCAGTAATGTTCAGTTGAAGGACACTGTGATGCTTGGGGCAGATTACTACGAAACTGAAGCAGAAGTTGCAGCACTACTTGCTGAGGGAAACGTTCCCATTGGAATAGGAGAGAACACAAAAATTCAAGAATGCATAATAGACAAGAATGCTAGAGTTGGAAAGAATGTAATCATCGCAAACTCGGAGGGAATACAAGAAGCAGATAGGTCATCCGATGGATTTTACATCAGATCTGGCATTACTGTAATCTTGAAGAACTCAGTAATTAAAGATGGAGTTGTGATATGA

Protein Analysis

522

Amino Acids

57.67

Weight (kDa)

8.02

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NTP_transferase PF00483 92 - 368 2.1e-68 Nucleotidyl transferase
LbH_GLGC PF25247 387 - 521 2.3e-50 GLGC left-handed parallel beta-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013381)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1173
AccI GTMKAC 2 cut(s) 417, 846
AccII CGCG 3 cut(s) 330, 710, 1133
AciI CCGC 6 cut(s) 328, 402, 521, 578, 710, 1133
AclI AACGTT 1 cut(s) 1371
AclWI GGATC 4 cut(s) 251, 264, 634, 699
AcoI YGGCCR 1 cut(s) 522
AcsI RAATTY 3 cut(s) 189, 1013, 1401
AcuI CTGAAG 1 cut(s) 1356
AfaI GTAC 3 cut(s) 231, 378, 568
AfiI CCNNNNNNNGG 1 cut(s) 353
AgsI TTSAA 7 cut(s) 451, 906, 925, 1206, 1297, 1406, 1534
AjiI CACGTC 1 cut(s) 749
AjnI CCWGG 2 cut(s) 535, 1108
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 5 cut(s) 13, 141, 204, 236, 816
AlwI GGATC 4 cut(s) 251, 264, 634, 699
AlwNI CAGNNNCTG 1 cut(s) 99
AoxI GGCC 1 cut(s) 522
ApeKI GCWGC 3 cut(s) 45, 93, 1349
ApoI RAATTY 3 cut(s) 189, 1013, 1401
AspLEI GCGC 2 cut(s) 332, 710
AsuHPI GGTGA 2 cut(s) 119, 647
BamHI GGATCC 1 cut(s) 256
BanII GRGCYC 1 cut(s) 114
BbsI GAAGAC 1 cut(s) 149
Bbv12I GWGCWC 1 cut(s) 114
BbvCI CCTCAGC 1 cut(s) 1362
BbvI GCAGC 3 cut(s) 32, 105, 1361
BccI CCATC 6 cut(s) 494, 661, 948, 1180, 1490, 1547
BceAI ACGGC 1 cut(s) 326
BciT130I CCWGG 2 cut(s) 537, 1110
BcoDI GTCTC 5 cut(s) 13, 141, 204, 236, 816
BfaI CTAG 3 cut(s) 42, 75, 1431
BfmI CTRYAG 3 cut(s) 19, 361, 661
BfuAI ACCTGC 1 cut(s) 1173
BglII AGATCT 2 cut(s) 1070, 1511
BisI GCNGC 6 cut(s) 46, 94, 328, 522, 1134, 1350
BlsI GCNGC 6 cut(s) 47, 95, 329, 523, 1135, 1351
Bme1390I CCNGG 2 cut(s) 537, 1110
BmgBI CACGTC 1 cut(s) 749
BmiI GGNNCC 3 cut(s) 258, 358, 560
BmrFI CCNGG 2 cut(s) 537, 1110
BmrI ACTGGG 1 cut(s) 1057
BmsI GCATC 5 cut(s) 452, 565, 598, 1114, 1299
BmuI ACTGGG 1 cut(s) 1057
BpiI GAAGAC 1 cut(s) 149
BplI GAGNNNNNCTC 2 cut(s) 642, 674
BpmI CTGGAG 1 cut(s) 669
Bpu10I CCTNAGC 1 cut(s) 1362
BpuEI CTTGAG 2 cut(s) 260, 970
Bsa29I ATCGAT 1 cut(s) 1200
BsaAI YACGTR 1 cut(s) 53
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 5 cut(s) 63, 260, 562, 870, 1109
BsaXI ACNNNNNCTCC 2 cut(s) 903, 933
Bsc4I CCNNNNNNNGG 1 cut(s) 353
Bse1I ACTGG 1 cut(s) 1052
Bse3DI GCAATG 2 cut(s) 109, 843
BseBI CCWGG 2 cut(s) 537, 1110
BseCI ATCGAT 1 cut(s) 1200
BseDI CCNNGG 5 cut(s) 63, 260, 562, 870, 1109
BseGI GGATG 5 cut(s) 613, 637, 672, 1105, 1490
BseLI CCNNNNNNNGG 1 cut(s) 353
BseMI GCAATG 2 cut(s) 109, 843
BseMII CTCAG 9 cut(s) 152, 194, 237, 453, 768, 1017, 1092, 1353, 1554
BseNI ACTGG 1 cut(s) 1052
BseXI GCAGC 3 cut(s) 32, 105, 1361
BseYI CCCAGC 1 cut(s) 215
Bsh1236I CGCG 3 cut(s) 330, 710, 1133
BshFI GGCC 1 cut(s) 524
BshVI ATCGAT 1 cut(s) 1200
BsiHKAI GWGCWC 1 cut(s) 114
BslI CCNNNNNNNGG 1 cut(s) 353
BsmAI GTCTC 5 cut(s) 13, 141, 204, 236, 816
BsmBI CGTCTC 1 cut(s) 816
BsmI GAATGC 3 cut(s) 1030, 1415, 1432
BsnI GGCC 1 cut(s) 524
Bso31I GGTCTC 1 cut(s) 13
Bsp1286I GDGCHC 1 cut(s) 114
Bsp143I GATC 8 cut(s) 161, 256, 639, 652, 691, 1070, 1268, 1511
BspACI CCGC 6 cut(s) 328, 402, 521, 578, 710, 1133
BspANI GGCC 1 cut(s) 524
BspCNI CTCAG 9 cut(s) 151, 193, 238, 452, 767, 1016, 1093, 1354, 1553
BspDI ATCGAT 1 cut(s) 1200
BspFNI CGCG 3 cut(s) 330, 710, 1133
BspLI GGNNCC 3 cut(s) 258, 358, 560
BspMAI CTGCAG 1 cut(s) 23
BspMI ACCTGC 1 cut(s) 1173
BspPI GGATC 4 cut(s) 251, 264, 634, 699
BspTNI GGTCTC 1 cut(s) 13
BsrDI GCAATG 2 cut(s) 109, 843
BsrI ACTGG 1 cut(s) 1052
BssECI CCNNGG 5 cut(s) 63, 260, 562, 870, 1109
BssMI GATC 8 cut(s) 161, 256, 639, 652, 691, 1070, 1268, 1511
BssT1I CCWWGG 3 cut(s) 260, 562, 870
Bst2UI CCWGG 2 cut(s) 537, 1110
Bst4CI ACNGT 4 cut(s) 268, 939, 1306, 1525
Bst6I CTCTTC 2 cut(s) 179, 784
BstAPI GCANNNNNTGC 4 cut(s) 99, 726, 1346, 1358
BstBAI YACGTR 1 cut(s) 53
BstC8I GCNNGC 1 cut(s) 339
BstDSI CCRYGG 1 cut(s) 63
BstF5I GGATG 5 cut(s) 613, 637, 672, 1105, 1490
BstFNI CGCG 3 cut(s) 330, 710, 1133
BstHHI GCGC 2 cut(s) 332, 710
BstKTI GATC 8 cut(s) 164, 259, 642, 655, 694, 1073, 1271, 1514
BstMAI GTCTC 5 cut(s) 13, 141, 204, 236, 816
BstMBI GATC 8 cut(s) 161, 256, 639, 652, 691, 1070, 1268, 1511
BstMWI GCNNNNNNNGC 7 cut(s) 85, 99, 338, 726, 1091, 1346, 1358
BstNI CCWGG 2 cut(s) 537, 1110
BstSCI CCNGG 2 cut(s) 535, 1108
BstSFI CTRYAG 3 cut(s) 19, 361, 661
BstSNI TACGTA 1 cut(s) 53
BstUI CGCG 3 cut(s) 330, 710, 1133
BstV1I GCAGC 3 cut(s) 32, 105, 1361
BstV2I GAAGAC 1 cut(s) 149
BstX2I RGATCY 3 cut(s) 256, 1070, 1511
BstYI RGATCY 3 cut(s) 256, 1070, 1511
Bsu15I ATCGAT 1 cut(s) 1200
BsuRI GGCC 1 cut(s) 524
BsuTUI ATCGAT 1 cut(s) 1200
BtgI CCRYGG 1 cut(s) 63
BtgZI GCGATG 1 cut(s) 1438
BtrI CACGTC 1 cut(s) 749
BtsCI GGATG 5 cut(s) 613, 637, 672, 1105, 1490
BtsIMutI CAGTG 3 cut(s) 811, 1098, 1302
BveI ACCTGC 1 cut(s) 1173
Cac8I GCNNGC 1 cut(s) 339
CaiI CAGNNNCTG 1 cut(s) 99
CfoI GCGC 2 cut(s) 332, 710
ClaI ATCGAT 1 cut(s) 1200
CseI GACGC 1 cut(s) 1139
Csp6I GTAC 3 cut(s) 230, 377, 567
CviAII CATG 3 cut(s) 115, 676, 1217
CviQI GTAC 3 cut(s) 230, 377, 567
DpnI GATC 8 cut(s) 163, 258, 641, 654, 693, 1072, 1270, 1513
DpnII GATC 8 cut(s) 161, 256, 639, 652, 691, 1070, 1268, 1511
EaeI YGGCCR 1 cut(s) 522
Eam1104I CTCTTC 2 cut(s) 179, 784
EarI CTCTTC 2 cut(s) 179, 784
Ecl136II GAGCTC 1 cut(s) 112
Eco105I TACGTA 1 cut(s) 53
Eco130I CCWWGG 3 cut(s) 260, 562, 870
Eco24I GRGCYC 1 cut(s) 114
Eco31I GGTCTC 1 cut(s) 13
Eco53kI GAGCTC 1 cut(s) 112
Eco57I CTGAAG 1 cut(s) 1356
EcoICRI GAGCTC 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 1013
EcoRII CCWGG 2 cut(s) 535, 1108
EcoT14I CCWWGG 3 cut(s) 260, 562, 870
EcoT22I ATGCAT 1 cut(s) 1415
EcoT38I GRGCYC 1 cut(s) 114
ErhI CCWWGG 3 cut(s) 260, 562, 870
Esp3I CGTCTC 1 cut(s) 816
FaeI CATG 3 cut(s) 118, 679, 1220
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FatI CATG 3 cut(s) 114, 675, 1216
FblI GTMKAC 2 cut(s) 417, 846
Fnu4HI GCNGC 6 cut(s) 46, 94, 328, 522, 1134, 1350
FokI GGATG 5 cut(s) 620, 644, 679, 1092, 1477
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 6 cut(s) 46, 94, 328, 522, 1134, 1350
FspBI CTAG 3 cut(s) 42, 75, 1431
GlaI GCGC 2 cut(s) 331, 709
GluI GCNGC 6 cut(s) 46, 94, 328, 522, 1134, 1350
GsaI CCCAGC 1 cut(s) 219
GsuI CTGGAG 1 cut(s) 669
HaeIII GGCC 1 cut(s) 524
HgaI GACGC 1 cut(s) 1139
HhaI GCGC 2 cut(s) 332, 710
Hin1II CATG 3 cut(s) 118, 679, 1220
Hin6I GCGC 2 cut(s) 330, 708
HinP1I GCGC 2 cut(s) 330, 708
HindIII AAGCTT 2 cut(s) 86, 1222
HinfI GANTC 6 cut(s) 24, 306, 405, 542, 1087, 1202
HphI GGTGA 2 cut(s) 119, 647
Hpy166II GTNNAC 2 cut(s) 418, 847
Hpy188I TCNGA 6 cut(s) 183, 757, 988, 1465, 1495, 1511
Hpy188III TCNNGA 5 cut(s) 648, 949, 1272, 1406, 1531
Hpy8I GTNNAC 2 cut(s) 418, 847
Hpy99I CGWCG 1 cut(s) 1133
HpyAV CCTTC 2 cut(s) 1009, 1291
HpyCH4III ACNGT 4 cut(s) 268, 939, 1306, 1525
HpyCH4IV ACGT 3 cut(s) 52, 748, 1371
HpyCH4V TGCA 8 cut(s) 21, 48, 102, 611, 729, 1094, 1349, 1413
HpyF10VI GCNNNNNNNGC 7 cut(s) 85, 99, 338, 726, 1091, 1346, 1358
HpySE526I ACGT 3 cut(s) 52, 748, 1371
Hsp92II CATG 3 cut(s) 118, 679, 1220
HspAI GCGC 2 cut(s) 330, 708
Kzo9I GATC 8 cut(s) 161, 256, 639, 652, 691, 1070, 1268, 1511
LmnI GCTCC 3 cut(s) 65, 293, 356
Lsp1109I GCAGC 3 cut(s) 32, 105, 1361
LweI GCATC 5 cut(s) 452, 565, 598, 1114, 1299
MaeI CTAG 3 cut(s) 42, 75, 1431
MaeII ACGT 3 cut(s) 52, 748, 1371
MalI GATC 8 cut(s) 163, 258, 641, 654, 693, 1072, 1270, 1513
MboI GATC 8 cut(s) 161, 256, 639, 652, 691, 1070, 1268, 1511
MboII GAAGA 9 cut(s) 133, 149, 156, 196, 784, 801, 1064, 1069, 1546
MfeI CAATTG 1 cut(s) 388
MflI RGATCY 3 cut(s) 256, 1070, 1511
MhlI GDGCHC 1 cut(s) 114
MluCI AATT 7 cut(s) 189, 388, 587, 1013, 1263, 1401, 1545
MlyI GAGTC 1 cut(s) 300
MmeI TCCRAC 1 cut(s) 1417
Mph1103I ATGCAT 1 cut(s) 1415
MseI TTAA 7 cut(s) 84, 194, 396, 941, 1038, 1229, 1548
MslI CAYNNNNRTG 1 cut(s) 1307
MspA1I CMGCKG 1 cut(s) 402
MspR9I CCNGG 2 cut(s) 537, 1110
MunI CAATTG 1 cut(s) 388
Mva1269I GAATGC 3 cut(s) 1030, 1415, 1432
MvaI CCWGG 2 cut(s) 537, 1110
MvnI CGCG 3 cut(s) 330, 710, 1133
MwoI GCNNNNNNNGC 7 cut(s) 85, 99, 338, 726, 1091, 1346, 1358
NdeII GATC 8 cut(s) 161, 256, 639, 652, 691, 1070, 1268, 1511
NlaIII CATG 3 cut(s) 118, 679, 1220
NlaIV GGNNCC 3 cut(s) 258, 358, 560
NsiI ATGCAT 1 cut(s) 1415
PctI GAATGC 3 cut(s) 1030, 1415, 1432
PfeI GAWTC 5 cut(s) 24, 405, 542, 1087, 1202
PkrI GCNGC 6 cut(s) 47, 95, 329, 523, 1135, 1351
PleI GAGTC 1 cut(s) 300
PpsI GAGTC 1 cut(s) 300
Ppu21I YACGTR 1 cut(s) 53
Psp124BI GAGCTC 1 cut(s) 114
Psp1406I AACGTT 1 cut(s) 1371
Psp6I CCWGG 2 cut(s) 535, 1108
PspFI CCCAGC 1 cut(s) 215
PspGI CCWGG 2 cut(s) 535, 1108
PspN4I GGNNCC 3 cut(s) 258, 358, 560
PstI CTGCAG 1 cut(s) 23
PstNI CAGNNNCTG 1 cut(s) 99
PsuI RGATCY 3 cut(s) 256, 1070, 1511
RsaI GTAC 3 cut(s) 231, 378, 568
RsaNI GTAC 3 cut(s) 230, 377, 567
RseI CAYNNNNRTG 1 cut(s) 1307
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 7 cut(s) 84, 194, 396, 941, 1038, 1229, 1548
SatI GCNGC 6 cut(s) 46, 94, 328, 522, 1134, 1350
Sau3AI GATC 8 cut(s) 161, 256, 639, 652, 691, 1070, 1268, 1511
SchI GAGTC 1 cut(s) 300
ScrFI CCNGG 2 cut(s) 537, 1110
SduI GDGCHC 1 cut(s) 114
SfaNI GCATC 5 cut(s) 452, 565, 598, 1114, 1299
SfcI CTRYAG 3 cut(s) 19, 361, 661
SmiMI CAYNNNNRTG 1 cut(s) 1307
SmlI CTYRAG 2 cut(s) 239, 949
SmoI CTYRAG 2 cut(s) 239, 949
SnaBI TACGTA 1 cut(s) 53
Sse9I AATT 7 cut(s) 189, 388, 587, 1013, 1263, 1401, 1545
SsiI CCGC 6 cut(s) 328, 402, 521, 578, 710, 1133
SspMI CTAG 3 cut(s) 42, 75, 1431
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 2 cut(s) 535, 1108
StyI CCWWGG 3 cut(s) 260, 562, 870
TaaI ACNGT 4 cut(s) 268, 939, 1306, 1525
TaiI ACGT 3 cut(s) 55, 751, 1374
TaqI TCGA 5 cut(s) 160, 304, 603, 1080, 1200
TasI AATT 7 cut(s) 189, 388, 587, 1013, 1263, 1401, 1545
TauI GCSGC 3 cut(s) 330, 524, 1136
TfiI GAWTC 5 cut(s) 24, 405, 542, 1087, 1202
Tru1I TTAA 7 cut(s) 84, 194, 396, 941, 1038, 1229, 1548
Tru9I TTAA 7 cut(s) 84, 194, 396, 941, 1038, 1229, 1548
TscAI CASTG 3 cut(s) 811, 1105, 1309
TseI GCWGC 3 cut(s) 45, 93, 1349
TspDTI ATGAA 1 cut(s) 785
TspRI CASTG 3 cut(s) 811, 1105, 1309
XapI RAATTY 3 cut(s) 189, 1013, 1401
XmiI GTMKAC 2 cut(s) 417, 846
XspI CTAG 3 cut(s) 42, 75, 1431
Zsp2I ATGCAT 1 cut(s) 1415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.