AT5G20660

Peptidase family M28

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0011223
Physical Location & Seq
Forward (+)
6986180 .. 6991139
4960 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G20660.3

Sequence Viewer

Length: 2733 bp
ATGAGGAAGCGTCATCCAAAGGCATCAGATTTAACAGAGCCATCTTCTTCGAGTAAAGAAACTGATGCTTCTTCTGATAAAGATGCTCTCGATAAGGAAGTGCAGGCTGATGTTAAAAGATCAGGGAAAGTATGGTTGTCAGTGTTGATTTTGATCACTTACTCATCTTGGTTTGTTTACAATTATCAGCTTGGGAATTTACCTAAACCCTTAACCGCAAAACAAGCTGGTAAAAGGGGTTTCTCTGAAATTGAAGCAATCAAACATGTTAAAGCTTTGACTCAGTTTGGTCCTCATCCTGTTTCTTCTGATGCTCTTGTCCATGCCCTTGAGTATGTATTGGCAGAAGTTGAGAAAGTTAAAGAAACAGCTCATTGGGAAGTTGATGTGAATGTTGATTTCTTTGAATCCAAATTTGGTGTAAATCGTTTGGTTGGTGGTCTTTTTAAGGGGAAGTCACTTGTGTATTCTGATATAAGTCACATTGTACTAAGAATCTTGCCTAAATATGAATCAGACGCTGGAGACAATGCTATTCTTGTCTCTTCTCACATTGATACTGTCTTCACAACAGGTGGGGCTGGAGATTGTAGTTCATGTGTAGCTGTAATGCTGGAACTAGCTCGATCTGCTTCCCAATCAGCTCATGGATTCAAGAATTCGATTATATTCTTGTTCAATACTGGAGAGGAAGAAGGTCTTAATGGCGCTCATAGCTTTATAACTCAGCATCCATGGAGTTCCACTGTTCGTTTAGCTATTGATTTAGAGGCCATGGGTACGGGTGGAAAGTCCAGTATTTTTCAGGCTGGCCCGAGTCCGTGGGCTATTGAGAATTTTGCTTTAGCCGCAAAATATCCATCTGGTCAAATCATCGGACAGGATCTGTTCACTTCTGGAATCATAAAATCTGCGACTGATTTCCAAGTATACAAGGAGGTTGCTGGTCTATCAGGGTTGGACTTTGCTTTTGCAGATAATACTGCTGTCTATCACACTAAGAACGATAAGATAGAACTAATAAAACCAGGATCGCTCCAGCATCTTGGGGAAAATATGCTTGCTTTCCTCCTTCGGGTTGCTTCATCTTCTGATCTGCCAAAGGATAAAACGCTCCAGGGAGAGGAAAGATCCAACCCGGACTCAGCTGTCTATTTTGACGTTTTGGGGAAGTATATGATTGTATACCGGCAAAGTTTGGCGACGATGCTATATGTTTCAGTGATCATGCAATCGATTCTTATATGGGTTTTGTCTGTGTTCATGGGTGGTTATCCGGCTGTTGTGTCGCTGATTTTGTCGTGTTTGAGTATTATCCTCTCATGGATATTCTCAGTAGCTTTCTCGGTAGCTGTTGCATTCATATTGCCATGGATTTCCTCGTCACCTGTGCCGTTTGCTTCTAACCCATGGATGGTAGTTGGATTGTTTGTGTCGCCTGCGATTTTGGGGTCAATAAGTGGTCAGCATGTGGCCTTTATTTTCCTTCGAAAGAAATCTTCGAACAGAAATTCAAACAAAATGCAAGTCTCACCAAGACTACGAGATAATTTGGCCAGGCTGGAGGCTGAAAGATGGCTATTTAAATCTGGTTTTATACAGTGGCTTGTTCTTCTGGCCTTGGGAACCTATTATAAACTTGGATCGACTTACCTCGCTCTGGTTTGGCTAGTTCCTCCTGCATTTGCATATGGATTGCTCGAGGCAACTTTATCTCCAATCCGACTGCCAAAGCCCCTCAAACTTGCAACTCTGCTTATCAGCCTGGCTGTACCAATTTTGGTTTCATCTGGCAGTTTTATCCAGTTGACAGGCACAATGATCGGCATGCTCATTCGATTTGACAGTAACCCAGGAGTAACTCCAGAATGGCTAGGCAGTGCATTGATCGCTGTTGCTATTGCTACTTTCATAAGTCTGTCCATGGTATACCTGCTGGCCTATATTCATCTCTCCGGTGCAAAAAAGTCGATTGTCACAGCATTATGCATTATCACTGCCCTCTCTCTTGCTCTTGTATCTTCTGGTGTTCTTCCTGCATTTACTGAGGATACTGCAAGAGCAGTAAATGTAGTACATGTTGTGGATACAAGCGGGCAAGATCAAGTGGCGTTTATATCACTATTCTCAAACACTCCTGGAAACCTAAACATGGAAGCAGAGCAAATCAAAGAAGGGTTCAGATGTGGTAGAGAGAATAAGATTGATTTTGTCAGTTTTGAAGCTAAATACAATTGTGTGACCAAGAAGGACGCAGAGGTTGGATGGGACAAACACGATATTCCAGTTCTGCGTGTCATAAACGACAAAGAAAGAGAAGGGGGAAGAGTCATAGCGGTTTCAATGGACACAGGAGGCTCATCGCGCTGGACACTTCGCATTGACATGGATGAAATAGAAGACTTTACAATGCAAGTAGGTGAGGAGGAAGAAGAAGAGTTGATGATAGAACGAGGCGAGAAAAGCAGCAATGAAGAAGGATGGCATCAAATTCAATTCGCAGGTGGGAAAAAGGCACCAACTAGCTTTGTTCTCAAACTTTACAAGGAGGAAGAAGTATCTGATGATAAGAAGAAGCAAAGACCTCTCTTGAAACTCAGAACTGACTTGAACCGTCGCACTCCACAAGTCCAAAGGGTTCTCGAAAGACTTCCTCCATTTTGCACAATGTTTGGCAAATCCACTTCTCCTTTTACTCTCGCCTTTCTTGCTTCTCTTCCTTACACCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_M28

Protein Analysis

910

Amino Acids

100.09

Weight (kDa)

6.66

Isoelectric Point (pI)

38.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M28 PF04389 1 - 153 1.1e-33 Peptidase family M28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011223)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20660 AT5G20660 AT5G20660 AT5G20660
fragaria_vesca FvH4_7g19460 FvH4_7g19460 FvH4_7g19460 FvH4_7g19460
malus_domestica MD07G1174500.v1.1
prunus_persica Prupe.2G213300_v2.0.a1 Prupe.2G213300_v2.0.a1 Prupe.2G213300_v2.0.a1
pyrus_communis pycom07g16870
rosa_chinensis RchiOBHm_Chr1g0363331
rosa_laevigata RLG00000027573
rosa_roxburghii Rroxscaffold_4G00293270
rosa_rugosa Rorug01G0306400
rosa_samantha Rh1AG315200 Rh1CG294900
rosa_wichuraiana Rw1G027930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 722, 1635
AarI CACCTGC 1 cut(s) 2492
AasI GACNNNNNNGTC 1 cut(s) 1148
Acc36I ACCTGC 2 cut(s) 1941, 2492
AccB1I GGYRCC 1 cut(s) 2515
AccI GTMKAC 3 cut(s) 930, 1185, 1929
AccII CGCG 1 cut(s) 2365
AciI CCGC 4 cut(s) 216, 849, 2094, 2336
AclWI GGATC 4 cut(s) 891, 1039, 1125, 1651
AcoI YGGCCR 1 cut(s) 1554
AcsI RAATTY 6 cut(s) 196, 413, 658, 835, 1510, 2490
AfaI GTAC 4 cut(s) 489, 781, 1773, 2076
AfiI CCNNNNNNNGG 5 cut(s) 1075, 1123, 1414, 1660, 2152
AflIII ACRYGT 2 cut(s) 265, 2077
AjnI CCWGG 6 cut(s) 1027, 1116, 1556, 1764, 1852, 2137
AjuI GAANNNNNNNTTGG 4 cut(s) 399, 431, 1768, 1800
Alw26I GTCTC 3 cut(s) 519, 547, 1534
AlwI GGATC 4 cut(s) 891, 1039, 1125, 1651
AlwNI CAGNNNCTG 2 cut(s) 521, 886
Ama87I CYCGRG 2 cut(s) 814, 1700
AoxI GGCC 6 cut(s) 771, 811, 1473, 1554, 1617, 1938
ApeKI GCWGC 1 cut(s) 2466
ApoI RAATTY 6 cut(s) 196, 413, 658, 835, 1510, 2490
ArsI GACNNNNNNTTYG 4 cut(s) 953, 985, 1512, 1544
Asp700I GAANNNNTTC 1 cut(s) 2649
AspLEI GCGC 2 cut(s) 710, 2367
AspS9I GGNCC 2 cut(s) 290, 812
AsuC2I CCSGG 1 cut(s) 1139
AsuHPI GGTGA 3 cut(s) 1377, 1524, 2432
AsuII TTCGAA 2 cut(s) 1489, 1502
AvaI CYCGRG 2 cut(s) 814, 1700
AvaII GGWCC 1 cut(s) 290
BalI TGGCCA 1 cut(s) 1556
BanI GGYRCC 1 cut(s) 2515
BbsI GAAGAC 2 cut(s) 556, 2406
BbvI GCAGC 1 cut(s) 2478
BccI CCATC 6 cut(s) 49, 868, 1408, 1569, 2259, 2475
BceAI ACGGC 1 cut(s) 1378
BcgI CGANNNNNNTGC 4 cut(s) 1804, 1838, 1950, 1984
BciT130I CCWGG 6 cut(s) 1029, 1118, 1558, 1766, 1854, 2139
BciVI GTATCC 2 cut(s) 2044, 2080
BclI TGATCA 2 cut(s) 153, 1224
BcnI CCSGG 1 cut(s) 1139
BcoDI GTCTC 3 cut(s) 519, 547, 1534
BfaI CTAG 4 cut(s) 620, 1670, 1874, 2523
BfoI RGCGCY 1 cut(s) 711
BfuAI ACCTGC 2 cut(s) 1941, 2492
BfuI GTATCC 2 cut(s) 2044, 2080
BisI GCNGC 2 cut(s) 849, 2467
BlsI GCNGC 2 cut(s) 850, 2468
Bme1390I CCNGG 7 cut(s) 1029, 1118, 1139, 1558, 1766, 1854, 2139
Bme18I GGWCC 1 cut(s) 290
BmeT110I CYCGRG 2 cut(s) 814, 1700
BmgT120I GGNCC 2 cut(s) 290, 812
BmiI GGNNCC 2 cut(s) 1627, 2517
BmrFI CCNGG 7 cut(s) 1029, 1118, 1139, 1558, 1766, 1854, 2139
BmsI GCATC 8 cut(s) 32, 55, 73, 301, 739, 1051, 1197, 2494
BpiI GAAGAC 2 cut(s) 556, 2406
BpmI CTGGAG 7 cut(s) 543, 603, 705, 1022, 1100, 1583, 1848
Bpu14I TTCGAA 2 cut(s) 1489, 1502
BpuEI CTTGAG 1 cut(s) 350
BpuMI CCSGG 1 cut(s) 1139
Bsa29I ATCGAT 1 cut(s) 1235
BsaBI GATNNNNATC 1 cut(s) 152
BsaJI CCNNGG 9 cut(s) 734, 774, 821, 1117, 1370, 1409, 1620, 1852, 1923
BsaWI WCCGGW 1 cut(s) 1955
BsaXI ACNNNNNCTCC 2 cut(s) 1699, 1729
Bsc4I CCNNNNNNNGG 5 cut(s) 1075, 1123, 1414, 1660, 2152
Bse118I RCCGGY 1 cut(s) 1188
Bse1I ACTGG 4 cut(s) 688, 795, 1804, 2285
Bse3DI GCAATG 1 cut(s) 2476
Bse8I GATNNNNATC 1 cut(s) 152
BseBI CCWGG 6 cut(s) 1029, 1118, 1558, 1766, 1854, 2139
BseCI ATCGAT 1 cut(s) 1235
BseDI CCNNGG 9 cut(s) 734, 774, 821, 1117, 1370, 1409, 1620, 1852, 1923
BseGI GGATG 7 cut(s) 13, 295, 730, 1419, 2270, 2395, 2486
BseJI GATNNNNATC 1 cut(s) 152
BseLI CCNNNNNNNGG 5 cut(s) 1075, 1123, 1414, 1660, 2152
BseMI GCAATG 1 cut(s) 2476
BseMII CTCAG 6 cut(s) 296, 740, 1158, 1347, 2037, 2611
BseNI ACTGG 4 cut(s) 688, 795, 1804, 2285
BseRI GAGGAG 1 cut(s) 2438
BseXI GCAGC 1 cut(s) 2478
BsgI GTGCAG 1 cut(s) 122
Bsh1236I CGCG 1 cut(s) 2365
BshFI GGCC 6 cut(s) 773, 813, 1475, 1556, 1619, 1940
BshNI GGYRCC 1 cut(s) 2515
BshVI ATCGAT 1 cut(s) 1235
BsiHKCI CYCGRG 2 cut(s) 814, 1700
BsiSI CCGG 4 cut(s) 1139, 1189, 1277, 1956
BslFI GGGAC 1 cut(s) 2282
BslI CCNNNNNNNGG 5 cut(s) 1075, 1123, 1414, 1660, 2152
BsmAI GTCTC 3 cut(s) 519, 547, 1534
BsmFI GGGAC 1 cut(s) 2282
BsmI GAATGC 1 cut(s) 1358
BsnI GGCC 6 cut(s) 773, 813, 1475, 1556, 1619, 1940
BsoBI CYCGRG 2 cut(s) 814, 1700
Bsp119I TTCGAA 2 cut(s) 1489, 1502
Bsp19I CCATGG 5 cut(s) 734, 774, 1370, 1409, 1923
BspACI CCGC 4 cut(s) 216, 849, 2094, 2336
BspANI GGCC 6 cut(s) 773, 813, 1475, 1556, 1619, 1940
BspCNI CTCAG 6 cut(s) 295, 739, 1157, 1346, 2038, 2610
BspDI ATCGAT 1 cut(s) 1235
BspFNI CGCG 1 cut(s) 2365
BspLI GGNNCC 2 cut(s) 1627, 2517
BspMI ACCTGC 2 cut(s) 1941, 2492
BspPI GGATC 4 cut(s) 891, 1039, 1125, 1651
BspT104I TTCGAA 2 cut(s) 1489, 1502
BspT107I GGYRCC 1 cut(s) 2515
BsrDI GCAATG 1 cut(s) 2476
BsrFI RCCGGY 1 cut(s) 1188
BsrI ACTGG 4 cut(s) 688, 795, 1804, 2285
BssAI RCCGGY 1 cut(s) 1188
BssECI CCNNGG 9 cut(s) 734, 774, 821, 1117, 1370, 1409, 1620, 1852, 1923
BssNAI GTATAC 3 cut(s) 931, 1186, 1930
BssT1I CCWWGG 6 cut(s) 734, 774, 1370, 1409, 1620, 1923
Bst1107I GTATAC 3 cut(s) 931, 1186, 1930
Bst2UI CCWGG 6 cut(s) 1029, 1118, 1558, 1766, 1854, 2139
Bst4CI ACNGT 5 cut(s) 562, 748, 1602, 1847, 2615
Bst6I CTCTTC 4 cut(s) 550, 2320, 2430, 2721
BstBI TTCGAA 2 cut(s) 1489, 1502
BstC8I GCNNGC 7 cut(s) 105, 811, 1062, 1440, 1829, 1938, 2096
BstDEI CTNAG 8 cut(s) 282, 491, 726, 999, 1144, 1333, 2046, 2597
BstDSI CCRYGG 6 cut(s) 734, 774, 821, 1370, 1409, 1923
BstF5I GGATG 7 cut(s) 13, 295, 730, 1419, 2270, 2395, 2486
BstFNI CGCG 1 cut(s) 2365
BstH2I RGCGCY 1 cut(s) 711
BstHHI GCGC 2 cut(s) 710, 2367
BstMAI GTCTC 3 cut(s) 519, 547, 1534
BstMWI GCNNNNNNNGC 8 cut(s) 224, 629, 714, 848, 1889, 2364, 2463, 2708
BstNI CCWGG 6 cut(s) 1029, 1118, 1558, 1766, 1854, 2139
BstNSI RCATGY 4 cut(s) 269, 1472, 1831, 2081
BstSCI CCNGG 7 cut(s) 1027, 1116, 1137, 1556, 1764, 1852, 2137
BstUI CGCG 1 cut(s) 2365
BstV1I GCAGC 1 cut(s) 2478
BstV2I GAAGAC 2 cut(s) 556, 2406
BstX2I RGATCY 2 cut(s) 883, 1130
BstXI CCANNNNNNTGG 1 cut(s) 1046
BstYI RGATCY 2 cut(s) 883, 1130
BstZ17I GTATAC 3 cut(s) 931, 1186, 1930
Bsu15I ATCGAT 1 cut(s) 1235
BsuI GTATCC 2 cut(s) 2044, 2080
BsuRI GGCC 6 cut(s) 773, 813, 1475, 1556, 1619, 1940
BsuTUI ATCGAT 1 cut(s) 1235
BtgI CCRYGG 6 cut(s) 734, 774, 821, 1370, 1409, 1923
BtgZI GCGATG 1 cut(s) 2346
BtsCI GGATG 7 cut(s) 13, 295, 730, 1419, 2270, 2395, 2486
BtsI GCAGTG 2 cut(s) 1885, 1995
BtsIMutI CAGTG 6 cut(s) 147, 744, 1227, 1607, 1885, 1995
BveI ACCTGC 2 cut(s) 1941, 2492
Cac8I GCNNGC 7 cut(s) 105, 811, 1062, 1440, 1829, 1938, 2096
CaiI CAGNNNCTG 2 cut(s) 521, 886
CfoI GCGC 2 cut(s) 710, 2367
Cfr10I RCCGGY 1 cut(s) 1188
Cfr13I GGNCC 2 cut(s) 290, 812
ClaI ATCGAT 1 cut(s) 1235
CseI GACGC 2 cut(s) 527, 2261
Csp6I GTAC 4 cut(s) 488, 780, 1772, 2075
CviQI GTAC 4 cut(s) 488, 780, 1772, 2075
DdeI CTNAG 8 cut(s) 282, 491, 726, 999, 1144, 1333, 2046, 2597
DraI TTTAAA 1 cut(s) 1585
DrdI GACNNNNNNGTC 1 cut(s) 1148
DseDI GACNNNNNNGTC 1 cut(s) 1148
EaeI YGGCCR 1 cut(s) 1554
Eam1104I CTCTTC 4 cut(s) 550, 2320, 2430, 2721
EarI CTCTTC 4 cut(s) 550, 2320, 2430, 2721
Eco130I CCWWGG 6 cut(s) 734, 774, 1370, 1409, 1620, 1923
Eco47I GGWCC 1 cut(s) 290
Eco88I CYCGRG 2 cut(s) 814, 1700
EcoRI GAATTC 1 cut(s) 658
EcoRII CCWGG 6 cut(s) 1027, 1116, 1556, 1764, 1852, 2137
EcoT14I CCWWGG 6 cut(s) 734, 774, 1370, 1409, 1620, 1923
EcoT22I ATGCAT 1 cut(s) 1991
ErhI CCWWGG 6 cut(s) 734, 774, 1370, 1409, 1620, 1923
FalI AAGNNNNNCTT 2 cut(s) 684, 716
FaqI GGGAC 1 cut(s) 2282
FauI CCCGC 1 cut(s) 2087
FauNDI CATATG 1 cut(s) 1690
FbaI TGATCA 2 cut(s) 153, 1224
FblI GTMKAC 3 cut(s) 930, 1185, 1929
Fnu4HI GCNGC 2 cut(s) 849, 2467
FokI GGATG 6 cut(s) 282, 717, 1426, 2277, 2402, 2493
Fsp4HI GCNGC 2 cut(s) 849, 2467
FspBI CTAG 4 cut(s) 620, 1670, 1874, 2523
GlaI GCGC 2 cut(s) 709, 2366
GluI GCNGC 2 cut(s) 849, 2467
GsuI CTGGAG 7 cut(s) 543, 603, 705, 1022, 1100, 1583, 1848
HaeII RGCGCY 1 cut(s) 711
HaeIII GGCC 6 cut(s) 773, 813, 1475, 1556, 1619, 1940
HapII CCGG 4 cut(s) 1139, 1189, 1277, 1956
HgaI GACGC 2 cut(s) 527, 2261
HhaI GCGC 2 cut(s) 710, 2367
Hin6I GCGC 2 cut(s) 708, 2365
HinP1I GCGC 2 cut(s) 708, 2365
HincII GTYRAC 1 cut(s) 1809
HindII GTYRAC 1 cut(s) 1809
HindIII AAGCTT 1 cut(s) 273
HpaII CCGG 4 cut(s) 1139, 1189, 1277, 1956
HphI GGTGA 3 cut(s) 1377, 1524, 2432
Hpy166II GTNNAC 6 cut(s) 178, 891, 931, 1186, 1809, 1930
Hpy188III TCNNGA 6 cut(s) 89, 655, 897, 1865, 2590, 2642
Hpy8I GTNNAC 6 cut(s) 178, 891, 931, 1186, 1809, 1930
Hpy99I CGWCG 2 cut(s) 1207, 2619
HpyAV CCTTC 7 cut(s) 689, 1082, 1496, 2168, 2242, 2312, 2471
HpyCH4III ACNGT 5 cut(s) 562, 748, 1602, 1847, 2615
HpyCH4IV ACGT 1 cut(s) 1161
HpyF10VI GCNNNNNNNGC 8 cut(s) 224, 629, 714, 848, 1889, 2364, 2463, 2708
HpyF3I CTNAG 8 cut(s) 282, 491, 726, 999, 1144, 1333, 2046, 2597
HpySE526I ACGT 1 cut(s) 1161
HspAI GCGC 2 cut(s) 708, 2365
Ksp22I TGATCA 2 cut(s) 153, 1224
LmnI GCTCC 2 cut(s) 1041, 1119
Lsp1109I GCAGC 1 cut(s) 2478
LweI GCATC 8 cut(s) 32, 55, 73, 301, 739, 1051, 1197, 2494
MaeI CTAG 4 cut(s) 620, 1670, 1874, 2523
MaeII ACGT 1 cut(s) 1161
MaeIII GTNAC 7 cut(s) 456, 479, 1383, 1847, 1858, 1975, 2239
MfeI CAATTG 1 cut(s) 2233
MflI RGATCY 2 cut(s) 883, 1130
MlsI TGGCCA 1 cut(s) 1556
MluNI TGGCCA 1 cut(s) 1556
MlyI GAGTC 4 cut(s) 274, 826, 1136, 2337
MmeI TCCRAC 5 cut(s) 939, 1158, 1402, 1747, 2242
Mox20I TGGCCA 1 cut(s) 1556
Mph1103I ATGCAT 1 cut(s) 1991
MroXI GAANNNNTTC 1 cut(s) 2649
MscI TGGCCA 1 cut(s) 1556
MseI TTAA 8 cut(s) 32, 114, 212, 270, 360, 447, 702, 1584
MslI CAYNNNNRTG 1 cut(s) 2384
Msp20I TGGCCA 1 cut(s) 1556
MspA1I CMGCKG 1 cut(s) 1148
MspI CCGG 4 cut(s) 1139, 1189, 1277, 1956
MspR9I CCNGG 7 cut(s) 1029, 1118, 1139, 1558, 1766, 1854, 2139
MunI CAATTG 1 cut(s) 2233
Mva1269I GAATGC 1 cut(s) 1358
MvaI CCWGG 6 cut(s) 1029, 1118, 1558, 1766, 1854, 2139
MvnI CGCG 1 cut(s) 2365
MwoI GCNNNNNNNGC 8 cut(s) 224, 629, 714, 848, 1889, 2364, 2463, 2708
NciI CCSGG 1 cut(s) 1139
NcoI CCATGG 5 cut(s) 734, 774, 1370, 1409, 1923
NdeI CATATG 1 cut(s) 1690
NlaIV GGNNCC 2 cut(s) 1627, 2517
NmuCI GTSAC 5 cut(s) 456, 479, 1383, 1975, 2239
NsiI ATGCAT 1 cut(s) 1991
NspI RCATGY 4 cut(s) 269, 1472, 1831, 2081
NspV TTCGAA 2 cut(s) 1489, 1502
PaeI GCATGC 1 cut(s) 1831
PaeR7I CTCGAG 1 cut(s) 1700
PaqCI CACCTGC 1 cut(s) 2492
PciI ACATGT 2 cut(s) 265, 2077
PctI GAATGC 1 cut(s) 1358
PdmI GAANNNNTTC 1 cut(s) 2649
PfeI GAWTC 6 cut(s) 407, 495, 512, 651, 900, 1237
PfoI TCCNGGA 1 cut(s) 2137
PkrI GCNGC 2 cut(s) 850, 2468
PleI GAGTC 4 cut(s) 274, 825, 1136, 2336
PpsI GAGTC 4 cut(s) 274, 825, 1136, 2336
PscI ACATGT 2 cut(s) 265, 2077
PsiI TTATAA 2 cut(s) 722, 1635
Psp6I CCWGG 6 cut(s) 1027, 1116, 1556, 1764, 1852, 2137
PspGI CCWGG 6 cut(s) 1027, 1116, 1556, 1764, 1852, 2137
PspN4I GGNNCC 2 cut(s) 1627, 2517
PspPI GGNCC 2 cut(s) 290, 812
PspXI VCTCGAGB 1 cut(s) 1700
PstNI CAGNNNCTG 2 cut(s) 521, 886
PsuI RGATCY 2 cut(s) 883, 1130
PvuII CAGCTG 1 cut(s) 1148
RsaI GTAC 4 cut(s) 489, 781, 1773, 2076
RsaNI GTAC 4 cut(s) 488, 780, 1772, 2075
RseI CAYNNNNRTG 1 cut(s) 2384
SaqAI TTAA 8 cut(s) 32, 114, 212, 270, 360, 447, 702, 1584
SatI GCNGC 2 cut(s) 849, 2467
Sau96I GGNCC 2 cut(s) 290, 812
SchI GAGTC 4 cut(s) 274, 826, 1136, 2337
ScrFI CCNGG 7 cut(s) 1029, 1118, 1139, 1558, 1766, 1854, 2139
SfaNI GCATC 8 cut(s) 32, 55, 73, 301, 739, 1051, 1197, 2494
Sfr274I CTCGAG 1 cut(s) 1700
SfuI TTCGAA 2 cut(s) 1489, 1502
SinI GGWCC 1 cut(s) 290
SlaI CTCGAG 1 cut(s) 1700
SmiI ATTTAAAT 1 cut(s) 1585
SmiMI CAYNNNNRTG 1 cut(s) 2384
SmlI CTYRAG 2 cut(s) 329, 1700
SmoI CTYRAG 2 cut(s) 329, 1700
SphI GCATGC 1 cut(s) 1831
SsiI CCGC 4 cut(s) 216, 849, 2094, 2336
SspMI CTAG 4 cut(s) 620, 1670, 1874, 2523
StyD4I CCNGG 7 cut(s) 1027, 1116, 1137, 1556, 1764, 1852, 2137
StyI CCWWGG 6 cut(s) 734, 774, 1370, 1409, 1620, 1923
SwaI ATTTAAAT 1 cut(s) 1585
TaaI ACNGT 5 cut(s) 562, 748, 1602, 1847, 2615
TaiI ACGT 1 cut(s) 1164
TatI WGTACW 2 cut(s) 487, 2074
TauI GCSGC 1 cut(s) 851
TfiI GAWTC 6 cut(s) 407, 495, 512, 651, 900, 1237
Tru1I TTAA 8 cut(s) 32, 114, 212, 270, 360, 447, 702, 1584
Tru9I TTAA 8 cut(s) 32, 114, 212, 270, 360, 447, 702, 1584
TscAI CASTG 6 cut(s) 147, 751, 1227, 1607, 1885, 2002
TseFI GTSAC 5 cut(s) 456, 479, 1383, 1975, 2239
TseI GCWGC 1 cut(s) 2466
Tsp45I GTSAC 5 cut(s) 456, 479, 1383, 1975, 2239
TspGWI ACGGA 1 cut(s) 810
TspRI CASTG 6 cut(s) 147, 751, 1227, 1607, 1885, 2002
VpaK11BI GGWCC 1 cut(s) 290
XapI RAATTY 6 cut(s) 196, 413, 658, 835, 1510, 2490
XceI RCATGY 4 cut(s) 269, 1472, 1831, 2081
XcmI CCANNNNNNNNNTGG 1 cut(s) 644
XhoI CTCGAG 1 cut(s) 1700
XmiI GTMKAC 3 cut(s) 930, 1185, 1929
XmnI GAANNNNTTC 1 cut(s) 2649
XspI CTAG 4 cut(s) 620, 1670, 1874, 2523
Zsp2I ATGCAT 1 cut(s) 1991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.