Rh1AG315200

Endoplasmic reticulum metallopeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0011223
Physical Location & Seq
Reverse (-)
54791300 .. 54797777
6478 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG315200.1

Sequence Viewer

Length: 2769 bp
ATGCGACGGAAGCCCCAGACTGGTTCCTCTTCAGCTCCCGAACCACAACCAGAACAAGAACCAACTCAAAACCCAAGTGTCACCACCCCATGGGTTGTTCAGAGGCCACAGCGATCACCCTTTGTCTGGCTGACCTTGTTGGCAGCCATCACATACTCGTGTTGGGGCGTTTATCATTACCAGTTCGAGTCCCTCCCCGCCCCTCTCACTCCTGACCAGGCCGGAAAGCGAGGCTTCTCCGAGTTCTCTGCTCGGAAACACGTCAAGGTTCTGACCCAGTTGGGCCCTCACCCTGTTGCCTCTGAAGCCATCACTCTTGCTCAGCAGTATGTATTGGCAGAAGCAGAGGAGATTAAGAAAACGGCTCACTGGGAAGTTGATGTGGAGGTGGACTCGTTTGTTGCGAAAACCGGAGCTAATCAAATGAAGAGTGGATTATTTAAGGGCAAAACACTTGTGTATTCGGATTTGAATCACATTGTTGTAAGAATCTCGCCCAAGTATTCACCTATTTCTGTGGACAATGCTGTTCTCGTGTCTTCTCACATTGACACTGTCTTCTCAACAGGAGGGGCCGGAGATTGCAGTTCGTGTGTGGCTGTTATGTTGGAACTTGCTCGTGGAGTTTCGCAGTGGGCGCATGGATTTAAGCATGCTGTTATATTTTTGTTTAACACTGGGGAGGAGGAAGGTCTAGATGGTGCTCATAGCTTTATAACTCAGTCTTCTATTGAATTTGTTTTGAACTTATTGATGCAGCATCCATGGAGCAGTACGATTCGTCTGGCTATTGATTTGGAGGCCATGGGTATTGGAGGGAAGTCTGGCATATTTCAGGCCGGCCCTCATCCTTGGGCTATTGAGAATTATGCTGCAGTAGCGAAATACCCATCTGGCCACATAATAGGACAGAATATTTTTTCCTCGGGAGCCATCAAATCTGCAACAGATTTCCAAGTATACAAAGAGTTAGCTGGCCTTTCAGGCCTTGACTTTGCTTACTCAGATAACAGTGCAGTATACCACACGAAGAATGACAAATTCGAGCTTCTTCAATTGGGATCTCTTCAACATCTTGGAGAAAATATGCTTGCTTTTCTGCTCCGCGTCGCTGCATCCTCTCATCTTCCAAAAGCCAGTACAATGGAAGAAGAGGATAAAACAGGCCTGAGTTCTGCCATATATTTTGACATTTTGGGGATGTACATGATTGTCTACCGTCAACGCTTCGCCAGAATGCTTCATAATTCAGTGATAGCGCAATCACTTCTTATATGGACTACATCATTGCTTATGGGTGGATATCCAGCTGCAGTATCATTGGTCTTGTCATGTTTAAGTGTCATTCTTATGTGGACATTTGCATTAAGTTTCTCTGTTATTGTGGCCTTTATTATACCCCTAATATCATCATCACCAGTGCCATATGTCGCAAACCCATGGCTTGTAGTTGGGTTATTCGCTGCACCTGCTCTGCTTGGAGCATTAACTGGTCAATATTTGGGTTATCTTGTTCTTCATACGTATTTGGCAAACGCTTACTCCAAGAAAAAACAGCTGTCACATGCTATCCGAGCCGATTTGGTTAAATTAGAGGCTGAAAGATGGCTCTACAAAGCTGGATCAATTCAATGGCTCATTCTCCTCTGTTTGGGAACCTATTACAGAATTGGATCGTCTTATCTGGCTCTTGCTTGGTTGGTTCCACCAGCATTCGCATATGGCTTTCTTGAAGCAACTCTAAGCCCAGTCCGATTACCTAAGCCACTGAAACTTGCAACTCTGCTGATAGGATTAGCTGTACCGATAGTACTTTCTGCTGGAGTATTCATTAGGGTGGCTGGCACAATAATCGGGACCATGGTTCGTTTTGATAGGAATCCTGGTGGCACTCCTGATTGGCTGGGAAATGTTATACTTGCTGTTTTTGTTTCTGCTGTCATGTGCCTGACTTTGGTGTATCTTCTTTCATACATTCATCTTTCAGGTGCCAAGAGATTGATTGTTCTCTCAACTTGCGCCTTGTTTTGCCTCTCGCTTGCTCTTGTATTATCTGGTACTGTACCAGCATTTACCAAAGACACATCAAGAGCTGTAAATGTTGTGCATGTTGTAGATACTACAAGAAGCATTGAAGATCCTAGATCCTATGTGTCACTGTTTTCTTCAACTCCTGGAAAATTGACAAAGGAGGTTGAGCTAATTAATGAAGGTTTCAGATGTGGTCGAGATCAGGTCTTTGATTTTGTAACTTTTACAGTGAAATACGGCTGTTGGACTGAGGATGACAGTGACAATGGGTGGAGTGAAGCAGACATTCCCATAATGCATGTTCAGAGTGATACTCAAGGTATTGAAAGAACAACACAAGTTTTAATTGATACAAAGGGTTCATTACGGTGGTCTCTTGCAATAAACATGGATGAAATACGGGATTTTGCATTCACAGATGCTGGAAACTCTGAGGAATTGGTTTCAGTTGGTGACAAGAGCGCTGTAGATGGTTGGCATGTTATTCAGTTTGCCGGGGGAAACAATTCACCAACGAAGTTTGGTCTGACTCTCTTCTGGACCAAAAACTCTACCCTTAAGGCGGAGGGGAAGAGAGACGAGCAAGCTCCCCTTCTCAAGTTAAGAACTGATATGGACATTGTAACACCGAAAGTCGAAAGAATTCTTTCAAAGCTTCCTACTTGGTGTTCACTGTTTGGCAAGTCCACGTCTCCCTACACCTTTGCATTCTTAAGTAGTCTTCCTGTTGATTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_M28

Protein Analysis

922

Amino Acids

101.06

Weight (kDa)

6.63

Isoelectric Point (pI)

36.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M28 PF04389 160 - 366 1.4e-41 Peptidase family M28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011223)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20660 AT5G20660 AT5G20660 AT5G20660
fragaria_vesca FvH4_7g19460 FvH4_7g19460 FvH4_7g19460 FvH4_7g19460
malus_domestica MD07G1174500.v1.1
prunus_persica Prupe.2G213300_v2.0.a1 Prupe.2G213300_v2.0.a1 Prupe.2G213300_v2.0.a1
pyrus_communis pycom07g16870
rosa_chinensis RchiOBHm_Chr1g0363331
rosa_laevigata RLG00000027573
rosa_roxburghii Rroxscaffold_4G00293270
rosa_rugosa Rorug01G0306400
rosa_samantha Rh1AG315200 Rh1CG294900
rosa_wichuraiana Rw1G027930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 716
AarI CACCTGC 1 cut(s) 1477
Acc36I ACCTGC 1 cut(s) 1477
AccB1I GGYRCC 1 cut(s) 1988
AccB7I CCANNNNNTGG 1 cut(s) 90
AccI GTMKAC 3 cut(s) 960, 1020, 1215
AccII CGCG 1 cut(s) 1107
AciI CCGC 3 cut(s) 198, 1105, 2594
AclWI GGATC 5 cut(s) 1069, 1630, 1681, 2132, 2139
AcoI YGGCCR 1 cut(s) 895
AcsI RAATTY 3 cut(s) 734, 1040, 2673
AcuI CTGAAG 2 cut(s) 15, 324
AfaI GTAC 7 cut(s) 775, 1141, 1205, 1803, 1812, 2059, 2064
AfeI AGCGCT 1 cut(s) 2494
AfiI CCNNNNNNNGG 6 cut(s) 20, 90, 126, 1651, 1954, 2593
AflII CTTAAG 2 cut(s) 2588, 2743
AflIII ACRYGT 1 cut(s) 259
AjiI CACGTC 2 cut(s) 262, 2721
AjnI CCWGG 3 cut(s) 216, 1882, 2173
Alw21I GWGCWC 1 cut(s) 706
Alw26I GTCTC 3 cut(s) 2409, 2601, 2727
AlwI GGATC 5 cut(s) 1069, 1630, 1681, 2132, 2139
AlwNI CAGNNNCTG 1 cut(s) 2453
Ama87I CYCGRG 1 cut(s) 925
Aor51HI AGCGCT 1 cut(s) 2494
ApaI GGGCCC 1 cut(s) 287
ApeKI GCWGC 6 cut(s) 143, 757, 872, 1112, 1310, 1463
ApoI RAATTY 3 cut(s) 734, 1040, 2673
AseI ATTAAT 1 cut(s) 2205
Asp700I GAANNNNTTC 3 cut(s) 2536, 2673, 2677
AspLEI GCGC 4 cut(s) 640, 1261, 2021, 2495
AspS9I GGNCC 6 cut(s) 283, 284, 573, 842, 1857, 2571
AsuC2I CCSGG 1 cut(s) 2527
AsuHPI GGTGA 7 cut(s) 73, 108, 281, 498, 1407, 2495, 2532
AvaI CYCGRG 1 cut(s) 925
AvaII GGWCC 2 cut(s) 1857, 2571
BaeGI GKGCMC 1 cut(s) 287
BalI TGGCCA 1 cut(s) 897
BanI GGYRCC 1 cut(s) 1988
BanII GRGCYC 1 cut(s) 287
BauI CACGAG 3 cut(s) 157, 533, 618
BbsI GAAGAC 4 cut(s) 531, 550, 717, 2744
Bbv12I GWGCWC 1 cut(s) 706
BbvI GCAGC 6 cut(s) 155, 769, 859, 1099, 1297, 1450
BccI CCATC 7 cut(s) 155, 317, 692, 898, 941, 1599, 2495
BceAI ACGGC 2 cut(s) 378, 2284
BcgI CGANNNNNNTGC 4 cut(s) 230, 264, 1834, 1868
BciT130I CCWGG 3 cut(s) 218, 1884, 2175
BcnI CCSGG 1 cut(s) 2527
BcoDI GTCTC 3 cut(s) 2409, 2601, 2727
BfaI CTAG 2 cut(s) 695, 2142
BfmI CTRYAG 3 cut(s) 873, 1311, 2496
BfoI RGCGCY 1 cut(s) 2496
BfrI CTTAAG 2 cut(s) 2588, 2743
BfuAI ACCTGC 1 cut(s) 1477
BglI GCCNNNNNGGC 1 cut(s) 984
BisI GCNGC 6 cut(s) 144, 758, 873, 1113, 1311, 1464
BlpI GCTNAGC 1 cut(s) 321
BlsI GCNGC 6 cut(s) 145, 759, 874, 1114, 1312, 1465
BmcAI AGTACT 1 cut(s) 1812
Bme1390I CCNGG 4 cut(s) 218, 1884, 2175, 2527
Bme18I GGWCC 2 cut(s) 1857, 2571
BmeT110I CYCGRG 1 cut(s) 925
BmgBI CACGTC 2 cut(s) 262, 2721
BmgT120I GGNCC 6 cut(s) 283, 284, 573, 842, 1857, 2571
BmiI GGNNCC 8 cut(s) 25, 285, 574, 931, 1657, 1704, 1858, 1990
BmrFI CCNGG 4 cut(s) 218, 1884, 2175, 2527
BmrI ACTGGG 4 cut(s) 271, 379, 687, 1742
BmsI GCATC 4 cut(s) 744, 769, 1124, 2440
BmuI ACTGGG 4 cut(s) 271, 379, 687, 1742
BpiI GAAGAC 4 cut(s) 531, 550, 717, 2744
BplI GAGNNNNNCTC 4 cut(s) 377, 409, 2329, 2361
BpmI CTGGAG 1 cut(s) 1842
Bpu10I CCTNAGC 1 cut(s) 1761
Bpu1102I GCTNAGC 1 cut(s) 321
BpuEI CTTGAG 2 cut(s) 2331, 2612
BpuMI CCSGG 1 cut(s) 2527
BsaAI YACGTR 1 cut(s) 1524
BsaBI GATNNNNATC 2 cut(s) 471, 1878
BsaI GGTCTC 1 cut(s) 2409
BsaJI CCNNGG 8 cut(s) 89, 764, 804, 851, 924, 1439, 1860, 2526
BsaWI WCCGGW 1 cut(s) 410
BsaXI ACNNNNNCTCC 2 cut(s) 1526, 1556
Bsc4I CCNNNNNNNGG 6 cut(s) 20, 90, 126, 1651, 1954, 2593
Bse118I RCCGGY 1 cut(s) 839
Bse1I ACTGG 9 cut(s) 25, 181, 277, 374, 682, 1137, 1418, 1495, 1748
Bse3DI GCAATG 1 cut(s) 1286
Bse8I GATNNNNATC 2 cut(s) 471, 1878
BseBI CCWGG 3 cut(s) 218, 1884, 2175
BseDI CCNNGG 8 cut(s) 89, 764, 804, 851, 924, 1439, 1860, 2526
BseGI GGATG 6 cut(s) 760, 847, 1115, 1206, 2290, 2428
BseJI GATNNNNATC 2 cut(s) 471, 1878
BseLI CCNNNNNNNGG 6 cut(s) 20, 90, 126, 1651, 1954, 2593
BseMI GCAATG 1 cut(s) 1286
BseMII CTCAG 6 cut(s) 335, 734, 1017, 1160, 2271, 2454
BseNI ACTGG 9 cut(s) 25, 181, 277, 374, 682, 1137, 1418, 1495, 1748
BseRI GAGGAG 3 cut(s) 362, 698, 1634
BseSI GKGCMC 1 cut(s) 287
BseXI GCAGC 6 cut(s) 155, 769, 859, 1099, 1297, 1450
BseYI CCCAGC 1 cut(s) 1903
BsgI GTGCAG 2 cut(s) 1035, 1449
Bsh1236I CGCG 1 cut(s) 1107
BshNI GGYRCC 1 cut(s) 1988
BsiHKAI GWGCWC 1 cut(s) 706
BsiHKCI CYCGRG 1 cut(s) 925
BsiSI CCGG 5 cut(s) 222, 411, 576, 840, 2526
BslFI GGGAC 2 cut(s) 175, 1870
BslI CCNNNNNNNGG 6 cut(s) 20, 90, 126, 1651, 1954, 2593
BsmAI GTCTC 3 cut(s) 2409, 2601, 2727
BsmBI CGTCTC 2 cut(s) 2601, 2727
BsmFI GGGAC 2 cut(s) 175, 1870
BsmI GAATGC 4 cut(s) 1242, 1712, 2441, 2738
Bso31I GGTCTC 1 cut(s) 2409
BsoBI CYCGRG 1 cut(s) 925
Bsp120I GGGCCC 1 cut(s) 283
Bsp1286I GDGCHC 2 cut(s) 287, 706
Bsp1407I TGTACA 1 cut(s) 1203
Bsp143I GATC 7 cut(s) 113, 1061, 1622, 1673, 2137, 2144, 2230
Bsp1720I GCTNAGC 1 cut(s) 321
Bsp19I CCATGG 5 cut(s) 89, 764, 804, 1439, 1860
BspACI CCGC 3 cut(s) 198, 1105, 2594
BspCNI CTCAG 6 cut(s) 334, 733, 1016, 1161, 2272, 2455
BspFNI CGCG 1 cut(s) 1107
BspLI GGNNCC 8 cut(s) 25, 285, 574, 931, 1657, 1704, 1858, 1990
BspMAI CTGCAG 2 cut(s) 877, 1315
BspMI ACCTGC 1 cut(s) 1477
BspPI GGATC 5 cut(s) 1069, 1630, 1681, 2132, 2139
BspT107I GGYRCC 1 cut(s) 1988
BspTI CTTAAG 2 cut(s) 2588, 2743
BspTNI GGTCTC 1 cut(s) 2409
BsrDI GCAATG 1 cut(s) 1286
BsrFI RCCGGY 1 cut(s) 839
BsrGI TGTACA 1 cut(s) 1203
BsrI ACTGG 9 cut(s) 25, 181, 277, 374, 682, 1137, 1418, 1495, 1748
BssAI RCCGGY 1 cut(s) 839
BssECI CCNNGG 8 cut(s) 89, 764, 804, 851, 924, 1439, 1860, 2526
BssMI GATC 7 cut(s) 113, 1061, 1622, 1673, 2137, 2144, 2230
BssNAI GTATAC 2 cut(s) 961, 1021
BssSI CACGAG 3 cut(s) 157, 533, 618
BssT1I CCWWGG 6 cut(s) 89, 764, 804, 851, 1439, 1860
Bst1107I GTATAC 2 cut(s) 961, 1021
Bst2BI CACGAG 3 cut(s) 157, 533, 618
Bst2UI CCWGG 3 cut(s) 218, 1884, 2175
Bst4CI ACNGT 9 cut(s) 556, 1013, 1220, 2062, 2160, 2260, 2291, 2400, 2706
Bst6I CTCTTC 6 cut(s) 34, 422, 1071, 1146, 2570, 2597
BstAFI CTTAAG 2 cut(s) 2588, 2743
BstAUI TGTACA 1 cut(s) 1203
BstBAI YACGTR 1 cut(s) 1524
BstC8I GCNNGC 7 cut(s) 654, 841, 976, 1092, 1843, 2040, 2616
BstDEI CTNAG 8 cut(s) 321, 720, 1003, 1169, 1742, 1761, 2280, 2463
BstDSI CCRYGG 5 cut(s) 89, 764, 804, 1439, 1860
BstF5I GGATG 6 cut(s) 760, 847, 1115, 1206, 2290, 2428
BstFNI CGCG 1 cut(s) 1107
BstH2I RGCGCY 1 cut(s) 2496
BstHHI GCGC 4 cut(s) 640, 1261, 2021, 2495
BstKTI GATC 7 cut(s) 116, 1064, 1625, 1676, 2140, 2147, 2233
BstMAI GTCTC 3 cut(s) 2409, 2601, 2727
BstMBI GATC 7 cut(s) 113, 1061, 1622, 1673, 2137, 2144, 2230
BstMWI GCNNNNNNNGC 7 cut(s) 10, 305, 637, 878, 984, 1469, 1574
BstNI CCWGG 3 cut(s) 218, 1884, 2175
BstNSI RCATGY 5 cut(s) 656, 1568, 2111, 2333, 2513
BstSCI CCNGG 4 cut(s) 216, 1882, 2173, 2525
BstSFI CTRYAG 3 cut(s) 873, 1311, 2496
BstSLI GKGCMC 1 cut(s) 287
BstSNI TACGTA 1 cut(s) 1524
BstUI CGCG 1 cut(s) 1107
BstV1I GCAGC 6 cut(s) 155, 769, 859, 1099, 1297, 1450
BstV2I GAAGAC 4 cut(s) 531, 550, 717, 2744
BstX2I RGATCY 3 cut(s) 1061, 2137, 2144
BstXI CCANNNNNNTGG 1 cut(s) 1144
BstYI RGATCY 3 cut(s) 1061, 2137, 2144
BstZ17I GTATAC 2 cut(s) 961, 1021
BtgI CCRYGG 5 cut(s) 89, 764, 804, 1439, 1860
BtrI CACGTC 2 cut(s) 262, 2721
BtsCI GGATG 6 cut(s) 760, 847, 1115, 1206, 2290, 2428
BtsI GCAGTG 1 cut(s) 638
BveI ACCTGC 1 cut(s) 1477
Cac8I GCNNGC 7 cut(s) 654, 841, 976, 1092, 1843, 2040, 2616
CaiI CAGNNNCTG 1 cut(s) 2453
CfoI GCGC 4 cut(s) 640, 1261, 2021, 2495
Cfr10I RCCGGY 1 cut(s) 839
Cfr13I GGNCC 6 cut(s) 283, 284, 573, 842, 1857, 2571
CseI GACGC 1 cut(s) 1096
Csp6I GTAC 7 cut(s) 774, 1140, 1204, 1802, 1811, 2058, 2063
CviQI GTAC 7 cut(s) 774, 1140, 1204, 1802, 1811, 2058, 2063
DdeI CTNAG 8 cut(s) 321, 720, 1003, 1169, 1742, 1761, 2280, 2463
DpnI GATC 7 cut(s) 115, 1063, 1624, 1675, 2139, 2146, 2232
DpnII GATC 7 cut(s) 113, 1061, 1622, 1673, 2137, 2144, 2230
EaeI YGGCCR 1 cut(s) 895
Eam1104I CTCTTC 6 cut(s) 34, 422, 1071, 1146, 2570, 2597
EarI CTCTTC 6 cut(s) 34, 422, 1071, 1146, 2570, 2597
EciI GGCGGA 1 cut(s) 2609
Eco105I TACGTA 1 cut(s) 1524
Eco130I CCWWGG 6 cut(s) 89, 764, 804, 851, 1439, 1860
Eco147I AGGCCT 2 cut(s) 987, 1167
Eco24I GRGCYC 1 cut(s) 287
Eco31I GGTCTC 1 cut(s) 2409
Eco32I GATATC 1 cut(s) 1304
Eco47I GGWCC 2 cut(s) 1857, 2571
Eco47III AGCGCT 1 cut(s) 2494
Eco57I CTGAAG 2 cut(s) 15, 324
Eco88I CYCGRG 1 cut(s) 925
EcoO109I RGGNCCY 1 cut(s) 284
EcoRI GAATTC 1 cut(s) 2673
EcoRII CCWGG 3 cut(s) 216, 1882, 2173
EcoRV GATATC 1 cut(s) 1304
EcoT14I CCWWGG 6 cut(s) 89, 764, 804, 851, 1439, 1860
EcoT22I ATGCAT 1 cut(s) 2331
EcoT38I GRGCYC 1 cut(s) 287
ErhI CCWWGG 6 cut(s) 89, 764, 804, 851, 1439, 1860
Esp3I CGTCTC 2 cut(s) 2601, 2727
FalI AAGNNNNNCTT 4 cut(s) 218, 250, 2607, 2639
FaqI GGGAC 2 cut(s) 175, 1870
FauI CCCGC 1 cut(s) 205
FauNDI CATATG 2 cut(s) 1426, 1720
FblI GTMKAC 3 cut(s) 960, 1020, 1215
Fnu4HI GCNGC 6 cut(s) 144, 758, 873, 1113, 1311, 1464
FokI GGATG 6 cut(s) 747, 834, 1102, 1213, 2297, 2435
FriOI GRGCYC 1 cut(s) 287
FseI GGCCGGCC 1 cut(s) 843
Fsp4HI GCNGC 6 cut(s) 144, 758, 873, 1113, 1311, 1464
FspBI CTAG 2 cut(s) 695, 2142
GlaI GCGC 4 cut(s) 639, 1260, 2020, 2494
GluI GCNGC 6 cut(s) 144, 758, 873, 1113, 1311, 1464
GsaI CCCAGC 1 cut(s) 1907
GsuI CTGGAG 1 cut(s) 1842
HaeII RGCGCY 1 cut(s) 2496
HapII CCGG 5 cut(s) 222, 411, 576, 840, 2526
HgaI GACGC 1 cut(s) 1096
HhaI GCGC 4 cut(s) 640, 1261, 2021, 2495
Hin6I GCGC 4 cut(s) 638, 1259, 2019, 2493
HinP1I GCGC 4 cut(s) 638, 1259, 2019, 2493
HincII GTYRAC 1 cut(s) 1223
HindII GTYRAC 1 cut(s) 1223
HindIII AAGCTT 1 cut(s) 2684
HinfI GANTC 7 cut(s) 188, 392, 472, 489, 778, 1879, 2560
HpaII CCGG 5 cut(s) 222, 411, 576, 840, 2526
HphI GGTGA 7 cut(s) 73, 108, 281, 498, 1407, 2495, 2532
Hpy166II GTNNAC 9 cut(s) 391, 520, 961, 1021, 1216, 1223, 1356, 2702, 2718
Hpy8I GTNNAC 9 cut(s) 391, 520, 961, 1021, 1216, 1223, 1356, 2702, 2718
Hpy99I CGWCG 2 cut(s) 9, 1112
HpyAV CCTTC 3 cut(s) 683, 2204, 2633
HpyCH4III ACNGT 9 cut(s) 556, 1013, 1220, 2062, 2160, 2260, 2291, 2400, 2706
HpyCH4IV ACGT 3 cut(s) 261, 1523, 2720
HpyF10VI GCNNNNNNNGC 7 cut(s) 10, 305, 637, 878, 984, 1469, 1574
HpyF3I CTNAG 8 cut(s) 321, 720, 1003, 1169, 1742, 1761, 2280, 2463
HpySE526I ACGT 3 cut(s) 261, 1523, 2720
HspAI GCGC 4 cut(s) 638, 1259, 2019, 2493
KroI GCCGGC 1 cut(s) 839
KroNI GCCGGC 1 cut(s) 841
Kzo9I GATC 7 cut(s) 113, 1061, 1622, 1673, 2137, 2144, 2230
LmnI GCTCC 7 cut(s) 40, 413, 768, 929, 1107, 1481, 2623
Lsp1109I GCAGC 6 cut(s) 155, 769, 859, 1099, 1297, 1450
LweI GCATC 4 cut(s) 744, 769, 1124, 2440
MaeI CTAG 2 cut(s) 695, 2142
MaeII ACGT 3 cut(s) 261, 1523, 2720
MaeIII GTNAC 7 cut(s) 79, 1560, 2154, 2248, 2291, 2483, 2653
MalI GATC 7 cut(s) 115, 1063, 1624, 1675, 2139, 2146, 2232
MboI GATC 7 cut(s) 113, 1061, 1622, 1673, 2137, 2144, 2230
MfeI CAATTG 1 cut(s) 1055
MflI RGATCY 3 cut(s) 1061, 2137, 2144
MhlI GDGCHC 2 cut(s) 287, 706
MlsI TGGCCA 1 cut(s) 897
MluNI TGGCCA 1 cut(s) 897
MlyI GAGTC 3 cut(s) 197, 386, 2554
MmeI TCCRAC 2 cut(s) 588, 2255
Mox20I TGGCCA 1 cut(s) 897
Mph1103I ATGCAT 1 cut(s) 2331
MroNI GCCGGC 1 cut(s) 839
MroXI GAANNNNTTC 3 cut(s) 2536, 2673, 2677
MscI TGGCCA 1 cut(s) 897
MslI CAYNNNNRTG 4 cut(s) 157, 1349, 1835, 2398
Msp20I TGGCCA 1 cut(s) 897
MspA1I CMGCKG 2 cut(s) 1310, 1558
MspCI CTTAAG 2 cut(s) 2588, 2743
MspI CCGG 5 cut(s) 222, 411, 576, 840, 2526
MspR9I CCNGG 4 cut(s) 218, 1884, 2175, 2527
MunI CAATTG 1 cut(s) 1055
Mva1269I GAATGC 4 cut(s) 1242, 1712, 2441, 2738
MvaI CCWGG 3 cut(s) 218, 1884, 2175
MvnI CGCG 1 cut(s) 1107
MwoI GCNNNNNNNGC 7 cut(s) 10, 305, 637, 878, 984, 1469, 1574
NaeI GCCGGC 1 cut(s) 841
NciI CCSGG 1 cut(s) 2527
NcoI CCATGG 5 cut(s) 89, 764, 804, 1439, 1860
NdeI CATATG 2 cut(s) 1426, 1720
NdeII GATC 7 cut(s) 113, 1061, 1622, 1673, 2137, 2144, 2230
NgoMIV GCCGGC 1 cut(s) 839
NlaIV GGNNCC 8 cut(s) 25, 285, 574, 931, 1657, 1704, 1858, 1990
NmuCI GTSAC 5 cut(s) 79, 1560, 2154, 2291, 2483
NsiI ATGCAT 1 cut(s) 2331
NspI RCATGY 5 cut(s) 656, 1568, 2111, 2333, 2513
PaeI GCATGC 1 cut(s) 656
PaqCI CACCTGC 1 cut(s) 1477
PceI AGGCCT 2 cut(s) 987, 1167
PcsI WCGNNNNNNNCGW 1 cut(s) 401
PctI GAATGC 4 cut(s) 1242, 1712, 2441, 2738
PdiI GCCGGC 1 cut(s) 841
PdmI GAANNNNTTC 3 cut(s) 2536, 2673, 2677
PfeI GAWTC 4 cut(s) 472, 489, 778, 1879
PflFI GACNNNGTC 1 cut(s) 554
PflMI CCANNNNNTGG 1 cut(s) 90
PfoI TCCNGGA 1 cut(s) 2173
PkrI GCNGC 6 cut(s) 145, 759, 874, 1114, 1312, 1465
PleI GAGTC 3 cut(s) 196, 386, 2554
PpsI GAGTC 3 cut(s) 196, 386, 2554
Ppu21I YACGTR 1 cut(s) 1524
PshBI ATTAAT 1 cut(s) 2205
PsiI TTATAA 1 cut(s) 716
Psp6I CCWGG 3 cut(s) 216, 1882, 2173
PspFI CCCAGC 1 cut(s) 1903
PspGI CCWGG 3 cut(s) 216, 1882, 2173
PspN4I GGNNCC 8 cut(s) 25, 285, 574, 931, 1657, 1704, 1858, 1990
PspOMI GGGCCC 1 cut(s) 283
PspPI GGNCC 6 cut(s) 283, 284, 573, 842, 1857, 2571
PstI CTGCAG 2 cut(s) 877, 1315
PstNI CAGNNNCTG 1 cut(s) 2453
PsuI RGATCY 3 cut(s) 1061, 2137, 2144
PsyI GACNNNGTC 1 cut(s) 554
PvuII CAGCTG 2 cut(s) 1310, 1558
RigI GGCCGGCC 1 cut(s) 843
RsaI GTAC 7 cut(s) 775, 1141, 1205, 1803, 1812, 2059, 2064
RsaNI GTAC 7 cut(s) 774, 1140, 1204, 1802, 1811, 2058, 2063
RseI CAYNNNNRTG 4 cut(s) 157, 1349, 1835, 2398
SatI GCNGC 6 cut(s) 144, 758, 873, 1113, 1311, 1464
Sau3AI GATC 7 cut(s) 113, 1061, 1622, 1673, 2137, 2144, 2230
Sau96I GGNCC 6 cut(s) 283, 284, 573, 842, 1857, 2571
ScaI AGTACT 1 cut(s) 1812
SchI GAGTC 3 cut(s) 197, 386, 2554
ScrFI CCNGG 4 cut(s) 218, 1884, 2175, 2527
SduI GDGCHC 2 cut(s) 287, 706
SfaNI GCATC 4 cut(s) 744, 769, 1124, 2440
SfcI CTRYAG 3 cut(s) 873, 1311, 2496
SfiI GGCCNNNNNGGCC 1 cut(s) 984
SinI GGWCC 2 cut(s) 1857, 2571
SmiMI CAYNNNNRTG 4 cut(s) 157, 1349, 1835, 2398
SmlI CTYRAG 4 cut(s) 2346, 2588, 2627, 2743
SmoI CTYRAG 4 cut(s) 2346, 2588, 2627, 2743
SnaBI TACGTA 1 cut(s) 1524
SphI GCATGC 1 cut(s) 656
SseBI AGGCCT 2 cut(s) 987, 1167
SsiI CCGC 3 cut(s) 198, 1105, 2594
SspI AATATT 2 cut(s) 916, 1499
SspMI CTAG 2 cut(s) 695, 2142
StuI AGGCCT 2 cut(s) 987, 1167
StyD4I CCNGG 4 cut(s) 216, 1882, 2173, 2525
StyI CCWWGG 6 cut(s) 89, 764, 804, 851, 1439, 1860
TaaI ACNGT 9 cut(s) 556, 1013, 1220, 2062, 2160, 2260, 2291, 2400, 2706
TaiI ACGT 3 cut(s) 264, 1526, 2723
TaqI TCGA 4 cut(s) 186, 1044, 2227, 2667
TatI WGTACW 3 cut(s) 1139, 1203, 1810
TfiI GAWTC 4 cut(s) 472, 489, 778, 1879
TseFI GTSAC 5 cut(s) 79, 1560, 2154, 2291, 2483
TseI GCWGC 6 cut(s) 143, 757, 872, 1112, 1310, 1463
Tsp45I GTSAC 5 cut(s) 79, 1560, 2154, 2291, 2483
TspDTI ATGAA 9 cut(s) 440, 1232, 1508, 1819, 1959, 1967, 2223, 2382, 2439
TspGWI ACGGA 1 cut(s) 22
Tth111I GACNNNGTC 1 cut(s) 554
Van91I CCANNNNNTGG 1 cut(s) 90
Vha464I CTTAAG 2 cut(s) 2588, 2743
VpaK11BI GGWCC 2 cut(s) 1857, 2571
VspI ATTAAT 1 cut(s) 2205
XapI RAATTY 3 cut(s) 734, 1040, 2673
XbaI TCTAGA 1 cut(s) 694
XceI RCATGY 5 cut(s) 656, 1568, 2111, 2333, 2513
XmiI GTMKAC 3 cut(s) 960, 1020, 1215
XmnI GAANNNNTTC 3 cut(s) 2536, 2673, 2677
XspI CTAG 2 cut(s) 695, 2142
ZrmI AGTACT 1 cut(s) 1812
Zsp2I ATGCAT 1 cut(s) 2331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.