AT5G22500

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
7470328 .. 7474133
3806 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G22500.2

Sequence Viewer

Length: 1476 bp
ATGGAATCCAATTGTGTTCAATTTCTCGGTAACAAGACCATTCTCATCACAGGAGCTCCTGGTTTTCTTGCCAAGGTTTTGGTAGAGAAAATACTAAGGTTGCAACCAAATGTGAAGAAGATATACCTTCTGTTGAGAGCTCCCGACGAAAAATCAGCCATGCAACGCCTACGTAGTGAGGTTATGGAGATCGACCTTTTTAAAGTGTTGAGGAACAATCTAGGAGAAGACAATTTGAATGCCTTGATGCGGGAAAAAATTGTGCCGGTTCCAGGTGATATATCGATCGATAATTTGGGATTGAAAGACACTGATCTCATACAACGTATGTGGAGTGAGATTGATATCATAATCAACATAGCAGCCACAACAAATTTCGATGAAAGATATGATATTGGTCTTGGCATCAACACATTTGGAGCCCTGAATGTTCTCAACTTCGCCAAAAAGTGTGTTAAAGGACAATTGCTTCTCCATGTCTCAACCGCGTATATAAGCGGTGAACAACCTGGATTGTTACTAGAGAAACCATTCAAGATGGGGGAGACTCTCAGCGGGGATCGGGAACTAGACATCAATATAGAACATGATCTAATGAAACAAAAATTGAAAGAGCTTCAAGATTGTTCTGATGAAGAGATCTCGCAAACAATGAAAGATTTTGGAATGGCAAGGGCAAAGCTTCATGGATGGCCAAATACATATGTATTCACCAAAGCAATGGGAGAGATGCTAATGGGAAAATACAGAGAAAATTTGCCACTTGTTATCATACGTCCAACAATGATTACTAGTACTATTGCCGAACCATTCCCCGGTTGGATTGAAGGGTTGAAAACATTAGACAGTGTGATTGTTGCATATGGTAAAGGAAGGCTTAAATGTTTTCTTGCGGATTCAAACTCAGTCTTTGACCTTATACCGGCAGACATGGTAGTAAATGCGATGGTTGCAGCCGCGACAGCTCATTCGGGAGACACCGGGATTCAGGCAATATATCATGTTGGTTCGTCTTGTAAGAATCCAGTCACGTTTGGACAACTTCACGATTTCACGGCTCGTTACTTCGCTAAACGTCCTTTGATTGGTCGGAATGGCTCGCCAATCATAGTGGTCAAAGGAACCATTCTGTCCACTATGGCTCAATTCAGCCTCTACATGACCCTTCGTTACAAGCTTCCTCTACAGATACTTCGATTGATCAATATAGTTTATCCATGGAGTCACGGAGATAACTACAGTGACCTAAGCCGCAAAATCAAGCTAGCTATGCGACTAGTTGAGCTTTACCAGCCTTACTTACTCTTCAAGGGCATATTTGATGATTTAAATACCGAAAGACTGCGAATGAAAAGAAAGGAGAATATCAAAGAGTTAGATGGATCGTTCGAGTTCGATCCCAAGTCCATTGATTGGGACAATTATATCACAAACACCCACATTCCTGGCCTCATCACCCATGTGCTTAAACAATAA

Protein Analysis

491

Amino Acids

55.48

Weight (kDa)

8.36

Isoelectric Point (pI)

31.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 16 - 316 5.8e-80 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1413
AccII CGCG 2 cut(s) 488, 959
AciI CCGC 7 cut(s) 250, 486, 498, 555, 893, 957, 1252
AclWI GGATC 3 cut(s) 567, 1390, 1391
AcoI YGGCCR 1 cut(s) 692
AcsI RAATTY 2 cut(s) 373, 754
AfaI GTAC 1 cut(s) 796
AfiI CCNNNNNNNGG 6 cut(s) 249, 272, 815, 922, 1085, 1413
AhlI ACTAGT 2 cut(s) 791, 1276
AjnI CCWGG 4 cut(s) 58, 271, 508, 1444
AleI CACNNNNGTG 1 cut(s) 1460
AluBI AGCT 9 cut(s) 56, 140, 616, 682, 965, 1177, 1264, 1268, 1285
AluI AGCT 9 cut(s) 56, 140, 616, 682, 965, 1177, 1264, 1268, 1285
Alw21I GWGCWC 2 cut(s) 58, 142
Alw26I GTCTC 3 cut(s) 484, 539, 969
AlwI GGATC 3 cut(s) 567, 1390, 1391
AoxI GGCC 2 cut(s) 692, 1447
ApeKI GCWGC 2 cut(s) 362, 953
ApoI RAATTY 2 cut(s) 373, 754
ArsI GACNNNNNNTTYG 2 cut(s) 952, 984
Asp700I GAANNNNTTC 1 cut(s) 530
AsuC2I CCSGG 2 cut(s) 816, 982
AsuHPI GGTGA 4 cut(s) 287, 512, 703, 1447
AsuNHI GCTAGC 1 cut(s) 1264
BalI TGGCCA 1 cut(s) 694
BanII GRGCYC 3 cut(s) 58, 142, 424
BarI GAAGNNNNNNTAC 2 cut(s) 107, 139
BbsI GAAGAC 1 cut(s) 234
Bbv12I GWGCWC 2 cut(s) 58, 142
BbvI GCAGC 2 cut(s) 374, 965
BccI CCATC 4 cut(s) 532, 684, 940, 1373
BceAI ACGGC 1 cut(s) 1071
BciT130I CCWGG 4 cut(s) 60, 273, 510, 1446
BclI TGATCA 1 cut(s) 1200
BcnI CCSGG 2 cut(s) 816, 982
BcoDI GTCTC 3 cut(s) 484, 539, 969
BcuI ACTAGT 2 cut(s) 791, 1276
BfaI CTAG 6 cut(s) 221, 521, 569, 792, 1265, 1277
BfmI CTRYAG 2 cut(s) 1184, 1237
BglII AGATCT 1 cut(s) 639
BisI GCNGC 4 cut(s) 363, 954, 957, 1252
BlsI GCNGC 4 cut(s) 364, 955, 958, 1253
BmcAI AGTACT 1 cut(s) 796
Bme1390I CCNGG 6 cut(s) 60, 273, 510, 816, 982, 1446
BmiI GGNNCC 3 cut(s) 270, 421, 1123
BmrFI CCNGG 6 cut(s) 60, 273, 510, 816, 982, 1446
BmsI GCATC 3 cut(s) 237, 414, 720
BmtI GCTAGC 1 cut(s) 1268
BpiI GAAGAC 1 cut(s) 234
Bpu10I CCTNAGC 1 cut(s) 1247
BpuMI CCSGG 2 cut(s) 816, 982
Bsa29I ATCGAT 2 cut(s) 284, 288
BsaAI YACGTR 1 cut(s) 173
BsaBI GATNNNNATC 1 cut(s) 344
BsaJI CCNNGG 3 cut(s) 72, 814, 1217
BsaXI ACNNNNNCTCC 2 cut(s) 40, 70
Bsc4I CCNNNNNNNGG 6 cut(s) 249, 272, 815, 922, 1085, 1413
Bse118I RCCGGY 2 cut(s) 265, 922
Bse1I ACTGG 1 cut(s) 1025
Bse3DI GCAATG 1 cut(s) 726
Bse8I GATNNNNATC 1 cut(s) 344
BseBI CCWGG 4 cut(s) 60, 273, 510, 1446
BseCI ATCGAT 2 cut(s) 284, 288
BseDI CCNNGG 3 cut(s) 72, 814, 1217
BseGI GGATG 1 cut(s) 695
BseJI GATNNNNATC 1 cut(s) 344
BseLI CCNNNNNNNGG 6 cut(s) 249, 272, 815, 922, 1085, 1413
BseMI GCAATG 1 cut(s) 726
BseMII CTCAG 2 cut(s) 565, 918
BseNI ACTGG 1 cut(s) 1025
BseXI GCAGC 2 cut(s) 374, 965
Bsh1236I CGCG 2 cut(s) 488, 959
Bsh1285I CGRYCG 1 cut(s) 288
BshFI GGCC 2 cut(s) 694, 1449
BshVI ATCGAT 2 cut(s) 284, 288
BsiEI CGRYCG 1 cut(s) 288
BsiHKAI GWGCWC 2 cut(s) 58, 142
BsiSI CCGG 4 cut(s) 266, 816, 923, 981
BslFI GGGAC 1 cut(s) 1430
BslI CCNNNNNNNGG 6 cut(s) 249, 272, 815, 922, 1085, 1413
BsmAI GTCTC 3 cut(s) 484, 539, 969
BsmFI GGGAC 1 cut(s) 1430
BsmI GAATGC 1 cut(s) 244
BsnI GGCC 2 cut(s) 694, 1449
Bsp1286I GDGCHC 3 cut(s) 58, 142, 424
Bsp143I GATC 9 cut(s) 189, 285, 313, 559, 589, 639, 1200, 1382, 1396
Bsp19I CCATGG 1 cut(s) 1217
BspACI CCGC 7 cut(s) 250, 486, 498, 555, 893, 957, 1252
BspANI GGCC 2 cut(s) 694, 1449
BspCNI CTCAG 2 cut(s) 564, 917
BspDI ATCGAT 2 cut(s) 284, 288
BspFNI CGCG 2 cut(s) 488, 959
BspLI GGNNCC 3 cut(s) 270, 421, 1123
BspOI GCTAGC 1 cut(s) 1268
BspPI GGATC 3 cut(s) 567, 1390, 1391
BsrDI GCAATG 1 cut(s) 726
BsrFI RCCGGY 2 cut(s) 265, 922
BsrI ACTGG 1 cut(s) 1025
BssAI RCCGGY 2 cut(s) 265, 922
BssECI CCNNGG 3 cut(s) 72, 814, 1217
BssMI GATC 9 cut(s) 189, 285, 313, 559, 589, 639, 1200, 1382, 1396
BssT1I CCWWGG 2 cut(s) 72, 1217
Bst2UI CCWGG 4 cut(s) 60, 273, 510, 1446
Bst4CI ACNGT 2 cut(s) 848, 1241
Bst6I CTCTTC 2 cut(s) 630, 1310
BstBAI YACGTR 1 cut(s) 173
BstC8I GCNNGC 2 cut(s) 1100, 1266
BstDEI CTNAG 4 cut(s) 95, 551, 904, 1247
BstDSI CCRYGG 1 cut(s) 1217
BstF5I GGATG 1 cut(s) 695
BstFNI CGCG 2 cut(s) 488, 959
BstKTI GATC 9 cut(s) 192, 288, 316, 562, 592, 642, 1203, 1385, 1399
BstMAI GTCTC 3 cut(s) 484, 539, 969
BstMBI GATC 9 cut(s) 189, 285, 313, 559, 589, 639, 1200, 1382, 1396
BstMCI CGRYCG 1 cut(s) 288
BstMWI GCNNNNNNNGC 4 cut(s) 950, 962, 1270, 1291
BstNI CCWGG 4 cut(s) 60, 273, 510, 1446
BstSCI CCNGG 6 cut(s) 58, 271, 508, 814, 980, 1444
BstSFI CTRYAG 2 cut(s) 1184, 1237
BstSNI TACGTA 1 cut(s) 173
BstUI CGCG 2 cut(s) 488, 959
BstV1I GCAGC 2 cut(s) 374, 965
BstV2I GAAGAC 1 cut(s) 234
BstX2I RGATCY 1 cut(s) 639
BstXI CCANNNNNNTGG 3 cut(s) 79, 721, 1445
BstYI RGATCY 1 cut(s) 639
Bsu15I ATCGAT 2 cut(s) 284, 288
BsuRI GGCC 2 cut(s) 694, 1449
BsuTUI ATCGAT 2 cut(s) 284, 288
BtgI CCRYGG 1 cut(s) 1217
BtgZI GCGATG 1 cut(s) 959
BtsCI GGATG 1 cut(s) 695
BtsIMutI CAGTG 3 cut(s) 309, 853, 1246
Cac8I GCNNGC 2 cut(s) 1100, 1266
Cfr10I RCCGGY 2 cut(s) 265, 922
ClaI ATCGAT 2 cut(s) 284, 288
Csp6I GTAC 1 cut(s) 795
CspCI CAANNNNNGTGG 4 cut(s) 311, 346, 1092, 1127
CviAII CATG 9 cut(s) 160, 476, 587, 686, 931, 1001, 1159, 1218, 1460
CviQI GTAC 1 cut(s) 795
DdeI CTNAG 4 cut(s) 95, 551, 904, 1247
DpnI GATC 9 cut(s) 191, 287, 315, 561, 591, 641, 1202, 1384, 1398
DpnII GATC 9 cut(s) 189, 285, 313, 559, 589, 639, 1200, 1382, 1396
DraI TTTAAA 2 cut(s) 202, 1329
EaeI YGGCCR 1 cut(s) 692
Eam1104I CTCTTC 2 cut(s) 630, 1310
EarI CTCTTC 2 cut(s) 630, 1310
Ecl136II GAGCTC 2 cut(s) 56, 140
Eco105I TACGTA 1 cut(s) 173
Eco130I CCWWGG 2 cut(s) 72, 1217
Eco24I GRGCYC 3 cut(s) 58, 142, 424
Eco32I GATATC 1 cut(s) 346
Eco53kI GAGCTC 2 cut(s) 56, 140
EcoICRI GAGCTC 2 cut(s) 56, 140
EcoRII CCWGG 4 cut(s) 58, 271, 508, 1444
EcoRV GATATC 1 cut(s) 346
EcoT14I CCWWGG 2 cut(s) 72, 1217
EcoT38I GRGCYC 3 cut(s) 58, 142, 424
ErhI CCWWGG 2 cut(s) 72, 1217
FaeI CATG 9 cut(s) 163, 479, 590, 689, 934, 1004, 1162, 1221, 1463
FalI AAGNNNNNCTT 2 cut(s) 861, 893
FaqI GGGAC 1 cut(s) 1430
FatI CATG 9 cut(s) 159, 475, 586, 685, 930, 1000, 1158, 1217, 1459
FauI CCCGC 2 cut(s) 243, 548
FauNDI CATATG 2 cut(s) 703, 862
FbaI TGATCA 1 cut(s) 1200
Fnu4HI GCNGC 4 cut(s) 363, 954, 957, 1252
FokI GGATG 1 cut(s) 702
FriOI GRGCYC 3 cut(s) 58, 142, 424
Fsp4HI GCNGC 4 cut(s) 363, 954, 957, 1252
FspBI CTAG 6 cut(s) 221, 521, 569, 792, 1265, 1277
GluI GCNGC 4 cut(s) 363, 954, 957, 1252
HaeIII GGCC 2 cut(s) 694, 1449
HapII CCGG 4 cut(s) 266, 816, 923, 981
Hin1II CATG 9 cut(s) 163, 479, 590, 689, 934, 1004, 1162, 1221, 1463
HindIII AAGCTT 2 cut(s) 680, 1175
HinfI GANTC 6 cut(s) 5, 547, 896, 985, 1021, 1222
HpaII CCGG 4 cut(s) 266, 816, 923, 981
HphI GGTGA 4 cut(s) 287, 512, 703, 1447
Hpy166II GTNNAC 2 cut(s) 503, 1134
Hpy188I TCNGA 2 cut(s) 631, 1092
Hpy188III TCNNGA 6 cut(s) 143, 535, 563, 620, 972, 1046
Hpy8I GTNNAC 2 cut(s) 503, 1134
Hpy99I CGWCG 1 cut(s) 149
HpyAV CCTTC 4 cut(s) 137, 821, 867, 1175
HpyCH4III ACNGT 2 cut(s) 848, 1241
HpyCH4IV ACGT 5 cut(s) 172, 325, 775, 1031, 1075
HpyCH4V TGCA 4 cut(s) 103, 163, 860, 953
HpyF10VI GCNNNNNNNGC 4 cut(s) 950, 962, 1270, 1291
HpyF3I CTNAG 4 cut(s) 95, 551, 904, 1247
HpySE526I ACGT 5 cut(s) 172, 325, 775, 1031, 1075
Hsp92II CATG 9 cut(s) 163, 479, 590, 689, 934, 1004, 1162, 1221, 1463
Ksp22I TGATCA 1 cut(s) 1200
Kzo9I GATC 9 cut(s) 189, 285, 313, 559, 589, 639, 1200, 1382, 1396
LmnI GCTCC 4 cut(s) 53, 61, 145, 419
Lsp1109I GCAGC 2 cut(s) 374, 965
LweI GCATC 3 cut(s) 237, 414, 720
MaeI CTAG 6 cut(s) 221, 521, 569, 792, 1265, 1277
MaeII ACGT 5 cut(s) 172, 325, 775, 1031, 1075
MaeIII GTNAC 7 cut(s) 29, 516, 1027, 1061, 1169, 1223, 1241
MalI GATC 9 cut(s) 191, 287, 315, 561, 591, 641, 1202, 1384, 1398
MboI GATC 9 cut(s) 189, 285, 313, 559, 589, 639, 1200, 1382, 1396
MboII GAAGA 5 cut(s) 127, 130, 239, 647, 1297
MfeI CAATTG 2 cut(s) 10, 464
MflI RGATCY 1 cut(s) 639
MhlI GDGCHC 3 cut(s) 58, 142, 424
MlsI TGGCCA 1 cut(s) 694
MluNI TGGCCA 1 cut(s) 694
MlyI GAGTC 2 cut(s) 541, 1231
MmeI TCCRAC 3 cut(s) 800, 803, 1070
MnlI CCTC 5 cut(s) 172, 204, 1163, 1191, 1460
Mox20I TGGCCA 1 cut(s) 694
MroXI GAANNNNTTC 1 cut(s) 530
MscI TGGCCA 1 cut(s) 694
MseI TTAA 5 cut(s) 201, 456, 879, 1328, 1467
MslI CAYNNNNRTG 1 cut(s) 1460
Msp20I TGGCCA 1 cut(s) 694
MspA1I CMGCKG 1 cut(s) 555
MspI CCGG 4 cut(s) 266, 816, 923, 981
MspR9I CCNGG 6 cut(s) 60, 273, 510, 816, 982, 1446
MunI CAATTG 2 cut(s) 10, 464
Mva1269I GAATGC 1 cut(s) 244
MvaI CCWGG 4 cut(s) 60, 273, 510, 1446
MvnI CGCG 2 cut(s) 488, 959
MwoI GCNNNNNNNGC 4 cut(s) 950, 962, 1270, 1291
NciI CCSGG 2 cut(s) 816, 982
NcoI CCATGG 1 cut(s) 1217
NdeI CATATG 2 cut(s) 703, 862
NdeII GATC 9 cut(s) 189, 285, 313, 559, 589, 639, 1200, 1382, 1396
NheI GCTAGC 1 cut(s) 1264
NlaIII CATG 9 cut(s) 163, 479, 590, 689, 934, 1004, 1162, 1221, 1463
NlaIV GGNNCC 3 cut(s) 270, 421, 1123
NmuCI GTSAC 3 cut(s) 1027, 1223, 1241
OliI CACNNNNGTG 1 cut(s) 1460
PctI GAATGC 1 cut(s) 244
PdmI GAANNNNTTC 1 cut(s) 530
PfeI GAWTC 4 cut(s) 5, 896, 985, 1021
PflMI CCANNNNNTGG 1 cut(s) 1413
PkrI GCNGC 4 cut(s) 364, 955, 958, 1253
Ple19I CGATCG 1 cut(s) 288
PleI GAGTC 2 cut(s) 541, 1230
PpsI GAGTC 2 cut(s) 541, 1230
Ppu21I YACGTR 1 cut(s) 173
Psp124BI GAGCTC 2 cut(s) 58, 142
Psp6I CCWGG 4 cut(s) 58, 271, 508, 1444
PspGI CCWGG 4 cut(s) 58, 271, 508, 1444
PspN4I GGNNCC 3 cut(s) 270, 421, 1123
PsuI RGATCY 1 cut(s) 639
PvuI CGATCG 1 cut(s) 288
RsaI GTAC 1 cut(s) 796
RsaNI GTAC 1 cut(s) 795
RseI CAYNNNNRTG 1 cut(s) 1460
SacI GAGCTC 2 cut(s) 58, 142
SaqAI TTAA 5 cut(s) 201, 456, 879, 1328, 1467
SatI GCNGC 4 cut(s) 363, 954, 957, 1252
Sau3AI GATC 9 cut(s) 189, 285, 313, 559, 589, 639, 1200, 1382, 1396
ScaI AGTACT 1 cut(s) 796
SchI GAGTC 2 cut(s) 541, 1231
ScrFI CCNGG 6 cut(s) 60, 273, 510, 816, 982, 1446
SduI GDGCHC 3 cut(s) 58, 142, 424
SfaNI GCATC 3 cut(s) 237, 414, 720
SfcI CTRYAG 2 cut(s) 1184, 1237
SmiI ATTTAAAT 1 cut(s) 1329
SmiMI CAYNNNNRTG 1 cut(s) 1460
SnaBI TACGTA 1 cut(s) 173
SpeI ACTAGT 2 cut(s) 791, 1276
SsiI CCGC 7 cut(s) 250, 486, 498, 555, 893, 957, 1252
SspMI CTAG 6 cut(s) 221, 521, 569, 792, 1265, 1277
SstI GAGCTC 2 cut(s) 58, 142
StyD4I CCNGG 6 cut(s) 58, 271, 508, 814, 980, 1444
StyI CCWWGG 2 cut(s) 72, 1217
SwaI ATTTAAAT 1 cut(s) 1329
TaaI ACNGT 2 cut(s) 848, 1241
TaiI ACGT 5 cut(s) 175, 328, 778, 1034, 1078
TaqI TCGA 7 cut(s) 192, 284, 288, 378, 1195, 1389, 1395
TatI WGTACW 1 cut(s) 794
TauI GCSGC 2 cut(s) 959, 1254
TfiI GAWTC 4 cut(s) 5, 896, 985, 1021
Tru1I TTAA 5 cut(s) 201, 456, 879, 1328, 1467
Tru9I TTAA 5 cut(s) 201, 456, 879, 1328, 1467
TscAI CASTG 3 cut(s) 316, 853, 1246
TseFI GTSAC 3 cut(s) 1027, 1223, 1241
TseI GCWGC 2 cut(s) 362, 953
Tsp45I GTSAC 3 cut(s) 1027, 1223, 1241
TspDTI ATGAA 6 cut(s) 396, 611, 648, 668, 674, 1364
TspGWI ACGGA 1 cut(s) 1242
TspRI CASTG 3 cut(s) 316, 853, 1246
Van91I CCANNNNNTGG 1 cut(s) 1413
XapI RAATTY 2 cut(s) 373, 754
XcmI CCANNNNNNNNNTGG 1 cut(s) 816
XmnI GAANNNNTTC 1 cut(s) 530
XspI CTAG 6 cut(s) 221, 521, 569, 792, 1265, 1277
ZrmI AGTACT 1 cut(s) 796
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.