Rw5G027310

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
40222832 .. 40230584
7753 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G027310.1

Sequence Viewer

Length: 1251 bp
ATGGGGAGCAAGAATGAACTCGATCGTGTCGAAAAGCTGACCGTGGTGCCTGGAGACATTTCAAAAGAGGATTTGGGGTTGCAGGATTCTGATTTGAGGGAAGAGATTTTGAGTCAAGTAGATGTCATTGTAAACTTAGCTGCAACAACTAATTTCGATGAAAGATATGATGTTGCAATTGGTCTCAACACCATGGGCGCCAAGTATGTTTTGAGCTTTGCTAAGCTTTGTGTTAAGTTAAAGGTGCTGGTACACATCTCCACCGCTTATGTTTGGGGGGAGAAGGAAGGACTTCTACTAGAACACCCCTGCCTCATGGGGCAGTCTCTCAACGGGACCCCTGGATTAGACATCGAGAACGAAATCCGGATCGCCAACGAAGAAGTTAGACGTCTTCGGTCAGAGCATGCTTCAGAAGCCGCTGTCACTCTTGCCCTCAAAGACTTTGGCCTCAAAAGAGCAAGTGTATATGGATGGCCGAACACTTACGTGTTCACCAAGGCAATGGGAGAGATGCTAATAGGAGAGCTCAGAGGAAATCTACCGGTTGTCATCCTACGCCCTACCATCATAACCAGCACTTACAAAGAACCTTTTCCTGGTTGGGTTGAAGGCATCAGAACCATTGATAGCGTAGCAGTTGGTTATGGTAAAGGAAAATTAACATTCTTTCTCTGCGACGTTGATGCAATTGTTGATATCGTACCAGCAGACATGGTGGTGAATGCAATAATAGCAGCAATGGCGGCTCATGCAGATGAACCTGGTGAAGTAATTTATCAAGTGGGTTCTTCTGTGAGCAACCCGGTCAAATACAATGATCTTCACGATTACGGTTTTCGTTACTTCACCAGAAAACCTTGGATTAATAAAGATGGAAAGCCAGTCACGGTTAAAAAGGTCACAGTTATGAGCAGCATGGATAGCTTTCACAGATACATGACCCTCCGTTACTTGCTATTCTTAAAGGGATTGGAACTGGTGAATATGGCATTTTGTCAGTACTTCGAAGGCACATATACTGATCTCAGTAGAAAGATCAAATTTGTGATGAGATTGGTGGAACTATACAGGCCGTACTTGTTCTTCAAGGGAGTTTTTGATGATATGAACACGGAGAAGTTGCGAATGGCAGTGAAAGAGACCACCACAGAGGCCGATATGTTTTACTTTGATCCCAAGATCATAGATTGGGAAGACTACTTTATGAATATACATATTGTTGGGGTTGTCAAATACGTGTTTAAATGA

Protein Analysis

416

Amino Acids

47.18

Weight (kDa)

5.66

Isoelectric Point (pI)

27.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 8 - 244 4.8e-54 Male sterility protein
Sterile PF03015 318 - 416 1.1e-18 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 394
AccB1I GGYRCC 2 cut(s) 46, 197
AccIII TCCGGA 1 cut(s) 366
AciI CCGC 3 cut(s) 264, 420, 746
AclWI GGATC 2 cut(s) 377, 1169
AcoI YGGCCR 1 cut(s) 476
AcsI RAATTY 1 cut(s) 1043
AcuI CTGAAG 1 cut(s) 396
AcyI GRCGYC 2 cut(s) 198, 391
AfaI GTAC 4 cut(s) 252, 705, 1004, 1079
AfiI CCNNNNNNNGG 1 cut(s) 599
AflIII ACRYGT 2 cut(s) 489, 1239
AgeI ACCGGT 1 cut(s) 544
AgsI TTSAA 3 cut(s) 63, 611, 1090
AjnI CCWGG 4 cut(s) 49, 340, 598, 763
AleI CACNNNNGTG 1 cut(s) 488
AluBI AGCT 6 cut(s) 37, 140, 216, 226, 529, 927
AluI AGCT 6 cut(s) 37, 140, 216, 226, 529, 927
Alw21I GWGCWC 1 cut(s) 531
Alw26I GTCTC 4 cut(s) 48, 188, 330, 1136
AlwI GGATC 2 cut(s) 377, 1169
Aor13HI TCCGGA 1 cut(s) 366
AoxI GGCC 4 cut(s) 448, 476, 1073, 1155
ApeKI GCWGC 3 cut(s) 140, 737, 915
ApoI RAATTY 1 cut(s) 1043
AseI ATTAAT 1 cut(s) 867
AsiGI ACCGGT 1 cut(s) 544
Asp700I GAANNNNTTC 2 cut(s) 291, 594
AspLEI GCGC 1 cut(s) 200
AspS9I GGNCC 1 cut(s) 336
AsuC2I CCSGG 1 cut(s) 806
AsuHPI GGTGA 5 cut(s) 487, 733, 779, 841, 994
AsuII TTCGAA 1 cut(s) 1008
AvaII GGWCC 1 cut(s) 336
BanI GGYRCC 2 cut(s) 46, 197
BanII GRGCYC 1 cut(s) 531
BarI GAAGNNNNNNTAC 4 cut(s) 279, 311, 1070, 1102
BbsI GAAGAC 2 cut(s) 386, 1203
Bbv12I GWGCWC 1 cut(s) 531
BbvI GCAGC 3 cut(s) 127, 749, 927
BccI CCATC 3 cut(s) 468, 575, 869
BceAI ACGGC 1 cut(s) 1060
BcgI CGANNNNNNTGC 2 cut(s) 668, 702
BciT130I CCWGG 4 cut(s) 51, 342, 600, 765
BcnI CCSGG 1 cut(s) 806
BcoDI GTCTC 4 cut(s) 48, 188, 330, 1136
BfaI CTAG 1 cut(s) 299
BfoI RGCGCY 1 cut(s) 201
BisI GCNGC 5 cut(s) 141, 420, 738, 747, 916
BlpI GCTNAGC 1 cut(s) 222
BlsI GCNGC 5 cut(s) 142, 421, 739, 748, 917
BmcAI AGTACT 1 cut(s) 1004
Bme1390I CCNGG 5 cut(s) 51, 342, 600, 765, 806
Bme18I GGWCC 1 cut(s) 336
BmgT120I GGNCC 1 cut(s) 336
BmiI GGNNCC 4 cut(s) 48, 199, 337, 338
BmrFI CCNGG 5 cut(s) 51, 342, 600, 765, 806
BmsI GCATC 3 cut(s) 504, 624, 676
BpiI GAAGAC 2 cut(s) 386, 1203
BpmI CTGGAG 1 cut(s) 72
Bpu1102I GCTNAGC 1 cut(s) 222
Bpu14I TTCGAA 1 cut(s) 1008
BpuMI CCSGG 1 cut(s) 806
BsaAI YACGTR 2 cut(s) 490, 1240
BsaHI GRCGYC 2 cut(s) 198, 391
BsaI GGTCTC 2 cut(s) 188, 1136
BsaJI CCNNGG 5 cut(s) 42, 192, 340, 498, 860
BsaWI WCCGGW 2 cut(s) 366, 544
Bsc4I CCNNNNNNNGG 1 cut(s) 599
Bse118I RCCGGY 1 cut(s) 544
Bse1I ACTGG 2 cut(s) 884, 984
Bse3DI GCAATG 2 cut(s) 510, 747
BseAI TCCGGA 1 cut(s) 366
BseBI CCWGG 4 cut(s) 51, 342, 600, 765
BseDI CCNNGG 5 cut(s) 42, 192, 340, 498, 860
BseGI GGATG 2 cut(s) 479, 552
BseLI CCNNNNNNNGG 1 cut(s) 599
BseMI GCAATG 2 cut(s) 510, 747
BseMII CTCAG 2 cut(s) 544, 1042
BseNI ACTGG 2 cut(s) 884, 984
BseXI GCAGC 3 cut(s) 127, 749, 927
Bsh1285I CGRYCG 1 cut(s) 25
BshFI GGCC 4 cut(s) 450, 478, 1075, 1157
BshNI GGYRCC 2 cut(s) 46, 197
BshTI ACCGGT 1 cut(s) 544
BsiEI CGRYCG 1 cut(s) 25
BsiHKAI GWGCWC 1 cut(s) 531
BsiSI CCGG 3 cut(s) 367, 545, 806
BslFI GGGAC 1 cut(s) 349
BslI CCNNNNNNNGG 1 cut(s) 599
BsmAI GTCTC 4 cut(s) 48, 188, 330, 1136
BsmFI GGGAC 1 cut(s) 349
BsmI GAATGC 1 cut(s) 730
BsnI GGCC 4 cut(s) 450, 478, 1075, 1157
Bso31I GGTCTC 2 cut(s) 188, 1136
Bsp119I TTCGAA 1 cut(s) 1008
Bsp1286I GDGCHC 1 cut(s) 531
Bsp13I TCCGGA 1 cut(s) 366
Bsp143I GATC 7 cut(s) 22, 369, 820, 1024, 1038, 1174, 1182
Bsp1720I GCTNAGC 1 cut(s) 222
Bsp19I CCATGG 1 cut(s) 192
BspACI CCGC 3 cut(s) 264, 420, 746
BspANI GGCC 4 cut(s) 450, 478, 1075, 1157
BspCNI CTCAG 2 cut(s) 543, 1041
BspEI TCCGGA 1 cut(s) 366
BspLI GGNNCC 4 cut(s) 48, 199, 337, 338
BspPI GGATC 2 cut(s) 377, 1169
BspT104I TTCGAA 1 cut(s) 1008
BspT107I GGYRCC 2 cut(s) 46, 197
BspTNI GGTCTC 2 cut(s) 188, 1136
BsrDI GCAATG 2 cut(s) 510, 747
BsrFI RCCGGY 1 cut(s) 544
BsrI ACTGG 2 cut(s) 884, 984
BssAI RCCGGY 1 cut(s) 544
BssECI CCNNGG 5 cut(s) 42, 192, 340, 498, 860
BssMI GATC 7 cut(s) 22, 369, 820, 1024, 1038, 1174, 1182
BssNI GRCGYC 2 cut(s) 198, 391
BssT1I CCWWGG 3 cut(s) 192, 498, 860
Bst2UI CCWGG 4 cut(s) 51, 342, 600, 765
Bst4CI ACNGT 4 cut(s) 43, 836, 892, 907
Bst6I CTCTTC 1 cut(s) 96
BstACI GRCGYC 2 cut(s) 198, 391
BstBAI YACGTR 2 cut(s) 490, 1240
BstBI TTCGAA 1 cut(s) 1008
BstC8I GCNNGC 1 cut(s) 408
BstDEI CTNAG 4 cut(s) 136, 222, 530, 1028
BstDSI CCRYGG 2 cut(s) 42, 192
BstF5I GGATG 2 cut(s) 479, 552
BstH2I RGCGCY 1 cut(s) 201
BstHHI GCGC 1 cut(s) 200
BstKTI GATC 7 cut(s) 25, 372, 823, 1027, 1041, 1177, 1185
BstMAI GTCTC 4 cut(s) 48, 188, 330, 1136
BstMBI GATC 7 cut(s) 22, 369, 820, 1024, 1038, 1174, 1182
BstMCI CGRYCG 1 cut(s) 25
BstMWI GCNNNNNNNGC 6 cut(s) 416, 734, 743, 746, 752, 924
BstNI CCWGG 4 cut(s) 51, 342, 600, 765
BstNSI RCATGY 1 cut(s) 410
BstSCI CCNGG 5 cut(s) 49, 340, 598, 763, 804
BstV1I GCAGC 3 cut(s) 127, 749, 927
BstV2I GAAGAC 2 cut(s) 386, 1203
BstXI CCANNNNNNTGG 1 cut(s) 505
BsuRI GGCC 4 cut(s) 450, 478, 1075, 1157
BtgI CCRYGG 2 cut(s) 42, 192
BtsCI GGATG 2 cut(s) 479, 552
BtsI GCAGTG 1 cut(s) 1140
BtsIMutI CAGTG 1 cut(s) 1140
Cac8I GCNNGC 1 cut(s) 408
CfoI GCGC 1 cut(s) 200
Cfr10I RCCGGY 1 cut(s) 544
Cfr13I GGNCC 1 cut(s) 336
CsiI ACCWGGT 1 cut(s) 763
Csp6I GTAC 4 cut(s) 251, 704, 1003, 1078
CspAI ACCGGT 1 cut(s) 544
CviAII CATG 7 cut(s) 193, 316, 407, 715, 752, 919, 940
CviQI GTAC 4 cut(s) 251, 704, 1003, 1078
DdeI CTNAG 4 cut(s) 136, 222, 530, 1028
DinI GGCGCC 1 cut(s) 199
DpnI GATC 7 cut(s) 24, 371, 822, 1026, 1040, 1176, 1184
DpnII GATC 7 cut(s) 22, 369, 820, 1024, 1038, 1174, 1182
DraI TTTAAA 1 cut(s) 1246
EaeI YGGCCR 1 cut(s) 476
Eam1104I CTCTTC 1 cut(s) 96
EarI CTCTTC 1 cut(s) 96
Ecl136II GAGCTC 1 cut(s) 529
Eco130I CCWWGG 3 cut(s) 192, 498, 860
Eco24I GRGCYC 1 cut(s) 531
Eco31I GGTCTC 2 cut(s) 188, 1136
Eco32I GATATC 1 cut(s) 700
Eco47I GGWCC 1 cut(s) 336
Eco53kI GAGCTC 1 cut(s) 529
Eco57I CTGAAG 1 cut(s) 396
EcoICRI GAGCTC 1 cut(s) 529
EcoO109I RGGNCCY 1 cut(s) 336
EcoRII CCWGG 4 cut(s) 49, 340, 598, 763
EcoRV GATATC 1 cut(s) 700
EcoT14I CCWWGG 3 cut(s) 192, 498, 860
EcoT38I GRGCYC 1 cut(s) 531
EgeI GGCGCC 1 cut(s) 199
EheI GGCGCC 1 cut(s) 199
ErhI CCWWGG 3 cut(s) 192, 498, 860
FaeI CATG 7 cut(s) 196, 319, 410, 718, 755, 922, 943
FaqI GGGAC 1 cut(s) 349
FatI CATG 7 cut(s) 192, 315, 406, 714, 751, 918, 939
Fnu4HI GCNGC 5 cut(s) 141, 420, 738, 747, 916
FokI GGATG 2 cut(s) 486, 539
FriOI GRGCYC 1 cut(s) 531
Fsp4HI GCNGC 5 cut(s) 141, 420, 738, 747, 916
FspBI CTAG 1 cut(s) 299
GlaI GCGC 1 cut(s) 199
GluI GCNGC 5 cut(s) 141, 420, 738, 747, 916
GsuI CTGGAG 1 cut(s) 72
HaeII RGCGCY 1 cut(s) 201
HaeIII GGCC 4 cut(s) 450, 478, 1075, 1157
HapII CCGG 3 cut(s) 367, 545, 806
HhaI GCGC 1 cut(s) 200
Hin1I GRCGYC 2 cut(s) 198, 391
Hin1II CATG 7 cut(s) 196, 319, 410, 718, 755, 922, 943
Hin6I GCGC 1 cut(s) 198
HinP1I GCGC 1 cut(s) 198
HindIII AAGCTT 1 cut(s) 224
HinfI GANTC 2 cut(s) 86, 112
HpaII CCGG 3 cut(s) 367, 545, 806
HphI GGTGA 5 cut(s) 487, 733, 779, 841, 994
Hpy166II GTNNAC 3 cut(s) 133, 253, 495
Hpy188I TCNGA 5 cut(s) 91, 403, 415, 533, 620
Hpy188III TCNNGA 3 cut(s) 355, 367, 827
Hpy8I GTNNAC 3 cut(s) 133, 253, 495
Hpy99I CGWCG 1 cut(s) 683
HpyAV CCTTC 4 cut(s) 277, 281, 605, 1004
HpyCH4III ACNGT 4 cut(s) 43, 836, 892, 907
HpyCH4IV ACGT 4 cut(s) 391, 489, 681, 1239
HpyCH4V TGCA 6 cut(s) 82, 143, 176, 689, 728, 755
HpyF10VI GCNNNNNNNGC 6 cut(s) 416, 734, 743, 746, 752, 924
HpyF3I CTNAG 4 cut(s) 136, 222, 530, 1028
HpySE526I ACGT 4 cut(s) 391, 489, 681, 1239
Hsp92I GRCGYC 2 cut(s) 198, 391
Hsp92II CATG 7 cut(s) 196, 319, 410, 718, 755, 922, 943
HspAI GCGC 1 cut(s) 198
KasI GGCGCC 1 cut(s) 197
KflI GGGWCCC 1 cut(s) 336
Kpn2I TCCGGA 1 cut(s) 366
Kzo9I GATC 7 cut(s) 22, 369, 820, 1024, 1038, 1174, 1182
LmnI GCTCC 1 cut(s) 6
Lsp1109I GCAGC 3 cut(s) 127, 749, 927
LweI GCATC 3 cut(s) 504, 624, 676
MabI ACCWGGT 1 cut(s) 763
MaeI CTAG 1 cut(s) 299
MaeII ACGT 4 cut(s) 391, 489, 681, 1239
MaeIII GTNAC 5 cut(s) 424, 842, 886, 901, 950
MalI GATC 7 cut(s) 24, 371, 822, 1026, 1040, 1176, 1184
MboI GATC 7 cut(s) 22, 369, 820, 1024, 1038, 1174, 1182
MboII GAAGA 7 cut(s) 113, 386, 392, 783, 815, 1078, 1208
MfeI CAATTG 2 cut(s) 177, 690
MhlI GDGCHC 1 cut(s) 531
MluCI AATT 6 cut(s) 151, 177, 659, 690, 774, 1043
Mly113I GGCGCC 1 cut(s) 198
MlyI GAGTC 1 cut(s) 121
MnlI CCTC 8 cut(s) 61, 90, 323, 446, 461, 527, 956, 1147
MroI TCCGGA 1 cut(s) 366
MroXI GAANNNNTTC 2 cut(s) 291, 594
MseI TTAA 7 cut(s) 234, 239, 662, 867, 894, 965, 1245
MslI CAYNNNNRTG 4 cut(s) 488, 719, 756, 908
MspA1I CMGCKG 1 cut(s) 422
MspI CCGG 3 cut(s) 367, 545, 806
MspR9I CCNGG 5 cut(s) 51, 342, 600, 765, 806
MunI CAATTG 2 cut(s) 177, 690
Mva1269I GAATGC 1 cut(s) 730
MvaI CCWGG 4 cut(s) 51, 342, 600, 765
MwoI GCNNNNNNNGC 6 cut(s) 416, 734, 743, 746, 752, 924
NarI GGCGCC 1 cut(s) 198
NciI CCSGG 1 cut(s) 806
NcoI CCATGG 1 cut(s) 192
NdeII GATC 7 cut(s) 22, 369, 820, 1024, 1038, 1174, 1182
NlaIII CATG 7 cut(s) 196, 319, 410, 718, 755, 922, 943
NlaIV GGNNCC 4 cut(s) 48, 199, 337, 338
NmuCI GTSAC 3 cut(s) 424, 886, 901
NspI RCATGY 1 cut(s) 410
NspV TTCGAA 1 cut(s) 1008
OliI CACNNNNGTG 1 cut(s) 488
PaeI GCATGC 1 cut(s) 410
PcsI WCGNNNNNNNCGW 1 cut(s) 27
PctI GAATGC 1 cut(s) 730
PdmI GAANNNNTTC 2 cut(s) 291, 594
PfeI GAWTC 1 cut(s) 86
PinAI ACCGGT 1 cut(s) 544
PkrI GCNGC 5 cut(s) 142, 421, 739, 748, 917
Ple19I CGATCG 1 cut(s) 25
PleI GAGTC 1 cut(s) 120
PluTI GGCGCC 1 cut(s) 201
PpsI GAGTC 1 cut(s) 120
Ppu21I YACGTR 2 cut(s) 490, 1240
PpuMI RGGWCCY 1 cut(s) 336
PshBI ATTAAT 1 cut(s) 867
Psp124BI GAGCTC 1 cut(s) 531
Psp5II RGGWCCY 1 cut(s) 336
Psp6I CCWGG 4 cut(s) 49, 340, 598, 763
PspGI CCWGG 4 cut(s) 49, 340, 598, 763
PspN4I GGNNCC 4 cut(s) 48, 199, 337, 338
PspPI GGNCC 1 cut(s) 336
PspPPI RGGWCCY 1 cut(s) 336
PvuI CGATCG 1 cut(s) 25
RsaI GTAC 4 cut(s) 252, 705, 1004, 1079
RsaNI GTAC 4 cut(s) 251, 704, 1003, 1078
RseI CAYNNNNRTG 4 cut(s) 488, 719, 756, 908
SacI GAGCTC 1 cut(s) 531
SaqAI TTAA 7 cut(s) 234, 239, 662, 867, 894, 965, 1245
SatI GCNGC 5 cut(s) 141, 420, 738, 747, 916
Sau3AI GATC 7 cut(s) 22, 369, 820, 1024, 1038, 1174, 1182
Sau96I GGNCC 1 cut(s) 336
ScaI AGTACT 1 cut(s) 1004
SchI GAGTC 1 cut(s) 121
ScrFI CCNGG 5 cut(s) 51, 342, 600, 765, 806
SduI GDGCHC 1 cut(s) 531
SexAI ACCWGGT 1 cut(s) 763
SfaNI GCATC 3 cut(s) 504, 624, 676
SfoI GGCGCC 1 cut(s) 199
SfuI TTCGAA 1 cut(s) 1008
SinI GGWCC 1 cut(s) 336
SmiMI CAYNNNNRTG 4 cut(s) 488, 719, 756, 908
SphI GCATGC 1 cut(s) 410
Sse9I AATT 6 cut(s) 151, 177, 659, 690, 774, 1043
SsiI CCGC 3 cut(s) 264, 420, 746
SspDI GGCGCC 1 cut(s) 197
SspMI CTAG 1 cut(s) 299
SstI GAGCTC 1 cut(s) 531
StyD4I CCNGG 5 cut(s) 49, 340, 598, 763, 804
StyI CCWWGG 3 cut(s) 192, 498, 860
TaaI ACNGT 4 cut(s) 43, 836, 892, 907
TaiI ACGT 4 cut(s) 394, 492, 684, 1242
TaqI TCGA 5 cut(s) 21, 30, 156, 354, 1008
TaqII GACCGA 1 cut(s) 387
TasI AATT 6 cut(s) 151, 177, 659, 690, 774, 1043
TatI WGTACW 1 cut(s) 1002
TauI GCSGC 2 cut(s) 422, 749
TfiI GAWTC 1 cut(s) 86
Tru1I TTAA 7 cut(s) 234, 239, 662, 867, 894, 965, 1245
Tru9I TTAA 7 cut(s) 234, 239, 662, 867, 894, 965, 1245
TscAI CASTG 1 cut(s) 1140
TseFI GTSAC 3 cut(s) 424, 886, 901
TseI GCWGC 3 cut(s) 140, 737, 915
Tsp45I GTSAC 3 cut(s) 424, 886, 901
TspDTI ATGAA 5 cut(s) 30, 174, 774, 1124, 1223
TspGWI ACGGA 2 cut(s) 938, 1130
TspRI CASTG 1 cut(s) 1140
VpaK11BI GGWCC 1 cut(s) 336
VspI ATTAAT 1 cut(s) 867
XapI RAATTY 1 cut(s) 1043
XceI RCATGY 1 cut(s) 410
XmnI GAANNNNTTC 2 cut(s) 291, 594
XspI CTAG 1 cut(s) 299
ZraI GACGTC 1 cut(s) 392
ZrmI AGTACT 1 cut(s) 1004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.