AT5G22740

Glycosyl transferase family 21

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
7554689 .. 7560190
5502 bp
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UTR
Exon/CDS
Intron
AT5G22740.1

Sequence Viewer

Length: 1605 bp
ATGGACGGTGTATCACCAAAGTTTGTGTTGCCGGAGACATTCGACGGCGTGAGGATGGAGATCACAGGCCAACTAGGCATGATCTGGGAGCTTGTAAAAGCACCAGTGATTGTCCCTCTTCTTCAATTAGCTGTTTACATCTGTTTGCTTATGTCTGTCATGCTTTTATGTGAGAGGGTTTACATGGGAATCGTCATCGTCCTCGTCAAACTCTTCTGGAAAAAACCAGACAAACGTTACAAGTTCGAGCCCATTCACGATGATGAAGAGCTTGGTAGCTCCAATTTCCCCGTCGTCCTCGTACAAATCCCCATGTTCAACGAACGAGAGGTTTATAAGCTATCAATAGGAGCGGCGTGTGGACTTTCCTGGCCGTCCGATCGTCTCGTGATTCAAGTGTTAGATGACTCTACAGATCCTACTGTTAAGCAAATGGTGGAAGTGGAGTGTCAAAGATGGGCAAGTAAAGGAATCAATATTAGGTATCAAATAAGAGAGAATAGAGTTGGTTACAAAGCCGGTGCTTTAAAGGAAGGACTCAAACGTAGTTATGTCAAGCATTGCGAGTATGTTGTCATCTTCGACGCCGATTTTCAGCCCGAACCTGATTTTCTTCGCCGTAGCATTCCTTTCCTCATGCACAATCCCAACATTGCCTTGGTTCAGGCTCGATGGCGGTTCGTAAATTCTGATGAGTGCTTATTGACGAGAATGCAAGAAATGTCATTGGATTACCATTTCACTGTTGAGCAAGAAGTGGGTTCATCAACACATGCTTTTTTCGGCTTCAACGGAACCGCCGGAATATGGAGAATAGCGGCGATAAATGAAGCTGGTGGGTGGAAAGATCGGACCACCGTGGAAGATATGGATCTCGCCGTCCGAGCAAGTCTTCGCGGCTGGAAATTTCTCTACCTCGGTGACCTTCAGGTGAAAAGTGAGCTTCCAAGTACTTTTAGAGCCTTCCGTTTTCAGCAACATAGATGGTCTTGTGGACCTGCAAATCTCTTTAGGAAAATGGTTATGGAGATCGTAAGAAACAAGAAAGTGAGATTCTGGAAGAAAGTGTACGTGATATACAGCTTCTTCTTTGTGAGGAAAATCATTGCACATTGGGTCACATTTTGTTTCTACTGCGTTGTTCTTCCTCTCACAATTCTCGTCCCGGAGGTTAAAGTTCCGATTTGGGGTTCGGTTTATATCCCATCCATCATCACTATCCTCAATTCCGTCGGTACTCCAAGGTCAATTCATCTGCTGTTCTATTGGATTCTATTCGAGAATGTGATGTCGCTGCACCGGACAAAGGCCACTCTCATTGGTCTGTTTGAGGCAGGAAGGGCTAACGAGTGGGTAGTGACTGCTAAGCTTGGAAGCGGTCAGAGCGCTAAAGGAAACACTAAAGGGATCAAAAGGTTCCCAAGAATCTTCAAATTGCCTGATCGATTGAATACATTGGAGCTTGGATTTGCGGCTTTCTTGTTCGTGTGCGGATGCTATGACTTTGTGCACGGGAAGAACAATTACTTCATCTACCTGTTTCTTCAGACAATGTCTTTCTTCATCAGTGGGCTGGGCTGGATCGGGACTTATGTCCCGAGTTAG

Protein Analysis

534

Amino Acids

61.56

Weight (kDa)

9.22

Isoelectric Point (pI)

41.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_tranf_2_3 PF13641 99 - 332 2.2e-14 Glycosyltransferase like family 2
Glycos_transf_2 PF00535 102 - 262 7.2e-12 Glycosyl transferase family 2
Glyco_trans_2_3 PF13632 190 - 387 6e-21 Glycosyl transferase family group 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 336
Acc36I ACCTGC 1 cut(s) 1006
AccBSI CCGCTC 1 cut(s) 353
AccII CGCG 1 cut(s) 897
AciI CCGC 8 cut(s) 353, 676, 798, 818, 897, 1377, 1472, 1491
AclI AACGTT 1 cut(s) 235
AclWI GGATC 4 cut(s) 410, 879, 1415, 1589
AcoI YGGCCR 1 cut(s) 371
AcsI RAATTY 2 cut(s) 685, 905
AcuI CTGAAG 2 cut(s) 911, 1529
AcyI GRCGYC 1 cut(s) 585
AfaI GTAC 4 cut(s) 303, 952, 1070, 1237
AfeI AGCGCT 1 cut(s) 1387
AfiI CCNNNNNNNGG 3 cut(s) 807, 1187, 1306
AgsI TTSAA 6 cut(s) 125, 319, 395, 790, 1432, 1450
AjnI CCWGG 1 cut(s) 368
Alw21I GWGCWC 1 cut(s) 1512
Alw26I GTCTC 2 cut(s) 29, 389
Alw44I GTGCAC 1 cut(s) 1508
AlwI GGATC 4 cut(s) 410, 879, 1415, 1589
Ama87I CYCGRG 1 cut(s) 1597
Aor51HI AGCGCT 1 cut(s) 1387
AoxI GGCC 3 cut(s) 67, 371, 1308
ApaLI GTGCAC 1 cut(s) 1508
ApeKI GCWGC 1 cut(s) 1294
ApoI RAATTY 2 cut(s) 685, 905
AspLEI GCGC 1 cut(s) 1388
AspS9I GGNCC 2 cut(s) 852, 995
AsuC2I CCSGG 1 cut(s) 1166
AsuHPI GGTGA 3 cut(s) 6, 932, 943
AvaI CYCGRG 1 cut(s) 1597
AvaII GGWCC 2 cut(s) 852, 995
BaeGI GKGCMC 1 cut(s) 1512
BanII GRGCYC 1 cut(s) 252
BarI GAAGNNNNNNTAC 4 cut(s) 1052, 1084, 1508, 1540
BauI CACGAG 1 cut(s) 386
BbsI GAAGAC 1 cut(s) 884
Bbv12I GWGCWC 1 cut(s) 1512
BbvI GCAGC 1 cut(s) 1281
BccI CCATC 6 cut(s) 49, 450, 666, 978, 1213, 1217
BceAI ACGGC 4 cut(s) 61, 358, 603, 863
BciT130I CCWGG 1 cut(s) 370
BcnI CCSGG 1 cut(s) 1166
BcoDI GTCTC 2 cut(s) 29, 389
BfaI CTAG 1 cut(s) 74
BfmI CTRYAG 1 cut(s) 411
BfoI RGCGCY 1 cut(s) 1389
BfuAI ACCTGC 1 cut(s) 1006
BglI GCCNNNNNGGC 1 cut(s) 75
BisI GCNGC 5 cut(s) 354, 819, 898, 1295, 1473
BlpI GCTNAGC 1 cut(s) 1365
BlsI GCNGC 5 cut(s) 355, 820, 899, 1296, 1474
BmcAI AGTACT 1 cut(s) 952
Bme1390I CCNGG 2 cut(s) 370, 1166
Bme18I GGWCC 2 cut(s) 852, 995
BmeT110I CYCGRG 1 cut(s) 1597
BmgT120I GGNCC 2 cut(s) 852, 995
BmiI GGNNCC 2 cut(s) 796, 1418
BmrFI CCNGG 2 cut(s) 370, 1166
BmsI GCATC 1 cut(s) 1484
BoxI GACNNNNGTC 1 cut(s) 1592
BpiI GAAGAC 1 cut(s) 884
Bpu1102I GCTNAGC 1 cut(s) 1365
BpuMI CCSGG 1 cut(s) 1166
Bsa29I ATCGAT 1 cut(s) 1444
BsaAI YACGTR 1 cut(s) 1072
BsaBI GATNNNNATC 2 cut(s) 59, 870
BsaHI GRCGYC 1 cut(s) 585
BsaJI CCNNGG 4 cut(s) 657, 858, 916, 1241
BsaWI WCCGGW 1 cut(s) 1299
Bsc4I CCNNNNNNNGG 3 cut(s) 807, 1187, 1306
Bse118I RCCGGY 1 cut(s) 518
Bse1I ACTGG 1 cut(s) 104
Bse3DI GCAATG 3 cut(s) 559, 651, 1104
Bse8I GATNNNNATC 2 cut(s) 59, 870
BseBI CCWGG 1 cut(s) 370
BseCI ATCGAT 1 cut(s) 1444
BseDI CCNNGG 4 cut(s) 657, 858, 916, 1241
BseGI GGATG 3 cut(s) 60, 1205, 1499
BseJI GATNNNNATC 2 cut(s) 59, 870
BseLI CCNNNNNNNGG 3 cut(s) 807, 1187, 1306
BseMI GCAATG 3 cut(s) 559, 651, 1104
BseNI ACTGG 1 cut(s) 104
BseSI GKGCMC 1 cut(s) 1512
BseXI GCAGC 1 cut(s) 1281
BseYI CCCAGC 1 cut(s) 1573
BsgI GTGCAG 1 cut(s) 1280
Bsh1236I CGCG 1 cut(s) 897
Bsh1285I CGRYCG 1 cut(s) 382
BshFI GGCC 3 cut(s) 69, 373, 1310
BshVI ATCGAT 1 cut(s) 1444
BsiEI CGRYCG 1 cut(s) 382
BsiHKAI GWGCWC 1 cut(s) 1512
BsiHKCI CYCGRG 1 cut(s) 1597
BsiSI CCGG 5 cut(s) 32, 519, 801, 1166, 1300
BslFI GGGAC 4 cut(s) 98, 1148, 1580, 1600
BslI CCNNNNNNNGG 3 cut(s) 807, 1187, 1306
BsmAI GTCTC 2 cut(s) 29, 389
BsmBI CGTCTC 1 cut(s) 389
BsmFI GGGAC 4 cut(s) 98, 1148, 1580, 1600
BsmI GAATGC 2 cut(s) 624, 717
BsnI GGCC 3 cut(s) 69, 373, 1310
BsoBI CYCGRG 1 cut(s) 1597
Bsp1286I GDGCHC 2 cut(s) 252, 1512
Bsp1720I GCTNAGC 1 cut(s) 1365
BspACI CCGC 8 cut(s) 353, 676, 798, 818, 897, 1377, 1472, 1491
BspANI GGCC 3 cut(s) 69, 373, 1310
BspDI ATCGAT 1 cut(s) 1444
BspFNI CGCG 1 cut(s) 897
BspLI GGNNCC 2 cut(s) 796, 1418
BspMI ACCTGC 1 cut(s) 1006
BspPI GGATC 4 cut(s) 410, 879, 1415, 1589
BspQI GCTCTTC 1 cut(s) 261
BsrBI CCGCTC 1 cut(s) 353
BsrDI GCAATG 3 cut(s) 559, 651, 1104
BsrFI RCCGGY 1 cut(s) 518
BsrI ACTGG 1 cut(s) 104
BssAI RCCGGY 1 cut(s) 518
BssECI CCNNGG 4 cut(s) 657, 858, 916, 1241
BssNI GRCGYC 1 cut(s) 585
BssSI CACGAG 1 cut(s) 386
BssT1I CCWWGG 2 cut(s) 657, 1241
Bst2BI CACGAG 1 cut(s) 386
Bst2UI CCWGG 1 cut(s) 370
Bst4CI ACNGT 4 cut(s) 8, 424, 745, 859
Bst6I CTCTTC 3 cut(s) 123, 218, 261
BstACI GRCGYC 1 cut(s) 585
BstBAI YACGTR 1 cut(s) 1072
BstDEI CTNAG 1 cut(s) 1365
BstDSI CCRYGG 1 cut(s) 858
BstEII GGTNACC 1 cut(s) 920
BstF5I GGATG 3 cut(s) 60, 1205, 1499
BstFNI CGCG 1 cut(s) 897
BstH2I RGCGCY 1 cut(s) 1389
BstHHI GCGC 1 cut(s) 1388
BstMAI GTCTC 2 cut(s) 29, 389
BstMCI CGRYCG 1 cut(s) 382
BstMWI GCNNNNNNNGC 4 cut(s) 75, 884, 1340, 1383
BstNI CCWGG 1 cut(s) 370
BstNSI RCATGY 1 cut(s) 776
BstPAI GACNNNNGTC 1 cut(s) 1592
BstPI GGTNACC 1 cut(s) 920
BstSCI CCNGG 2 cut(s) 368, 1164
BstSFI CTRYAG 1 cut(s) 411
BstSLI GKGCMC 1 cut(s) 1512
BstUI CGCG 1 cut(s) 897
BstV1I GCAGC 1 cut(s) 1281
BstV2I GAAGAC 1 cut(s) 884
BstX2I RGATCY 2 cut(s) 415, 871
BstYI RGATCY 2 cut(s) 415, 871
Bsu15I ATCGAT 1 cut(s) 1444
BsuRI GGCC 3 cut(s) 69, 373, 1310
BsuTUI ATCGAT 1 cut(s) 1444
BtgI CCRYGG 1 cut(s) 858
BtsCI GGATG 3 cut(s) 60, 1205, 1499
BtsIMutI CAGTG 3 cut(s) 111, 741, 1573
BveI ACCTGC 1 cut(s) 1006
CfoI GCGC 1 cut(s) 1388
Cfr10I RCCGGY 1 cut(s) 518
Cfr13I GGNCC 2 cut(s) 852, 995
ClaI ATCGAT 1 cut(s) 1444
CseI GACGC 1 cut(s) 593
Csp6I GTAC 4 cut(s) 302, 951, 1069, 1236
CspCI CAANNNNNGTGG 2 cut(s) 1300, 1335
CviAII CATG 6 cut(s) 79, 160, 184, 313, 637, 773
CviQI GTAC 4 cut(s) 302, 951, 1069, 1236
DdeI CTNAG 1 cut(s) 1365
DraI TTTAAA 1 cut(s) 528
EaeI YGGCCR 1 cut(s) 371
Eam1104I CTCTTC 3 cut(s) 123, 218, 261
EarI CTCTTC 3 cut(s) 123, 218, 261
Eco130I CCWWGG 2 cut(s) 657, 1241
Eco24I GRGCYC 1 cut(s) 252
Eco47I GGWCC 2 cut(s) 852, 995
Eco47III AGCGCT 1 cut(s) 1387
Eco57I CTGAAG 2 cut(s) 911, 1529
Eco88I CYCGRG 1 cut(s) 1597
Eco91I GGTNACC 1 cut(s) 920
EcoO65I GGTNACC 1 cut(s) 920
EcoRII CCWGG 1 cut(s) 368
EcoT14I CCWWGG 2 cut(s) 657, 1241
EcoT38I GRGCYC 1 cut(s) 252
ErhI CCWWGG 2 cut(s) 657, 1241
Esp3I CGTCTC 1 cut(s) 389
FaeI CATG 6 cut(s) 82, 163, 187, 316, 640, 776
FaqI GGGAC 4 cut(s) 98, 1148, 1580, 1600
FatI CATG 6 cut(s) 78, 159, 183, 312, 636, 772
Fnu4HI GCNGC 5 cut(s) 354, 819, 898, 1295, 1473
FokI GGATG 3 cut(s) 67, 1192, 1506
FriOI GRGCYC 1 cut(s) 252
Fsp4HI GCNGC 5 cut(s) 354, 819, 898, 1295, 1473
FspBI CTAG 1 cut(s) 74
GlaI GCGC 1 cut(s) 1387
GluI GCNGC 5 cut(s) 354, 819, 898, 1295, 1473
GsaI CCCAGC 1 cut(s) 1577
HaeII RGCGCY 1 cut(s) 1389
HaeIII GGCC 3 cut(s) 69, 373, 1310
HapII CCGG 5 cut(s) 32, 519, 801, 1166, 1300
HgaI GACGC 1 cut(s) 593
HhaI GCGC 1 cut(s) 1388
Hin1I GRCGYC 1 cut(s) 585
Hin1II CATG 6 cut(s) 82, 163, 187, 316, 640, 776
Hin6I GCGC 1 cut(s) 1386
HinP1I GCGC 1 cut(s) 1386
HindIII AAGCTT 1 cut(s) 1367
HinfI GANTC 8 cut(s) 189, 391, 407, 471, 537, 1053, 1270, 1425
HpaII CCGG 5 cut(s) 32, 519, 801, 1166, 1300
HphI GGTGA 3 cut(s) 6, 932, 943
Hpy166II GTNNAC 6 cut(s) 136, 181, 362, 995, 1069, 1510
Hpy188I TCNGA 7 cut(s) 379, 691, 852, 884, 1182, 1383, 1548
Hpy188III TCNNGA 7 cut(s) 217, 257, 388, 1057, 1279, 1585, 1597
Hpy8I GTNNAC 6 cut(s) 136, 181, 362, 995, 1069, 1510
Hpy99I CGWCG 4 cut(s) 47, 296, 587, 1235
HpyAV CCTTC 4 cut(s) 527, 935, 973, 1332
HpyCH4III ACNGT 4 cut(s) 8, 424, 745, 859
HpyCH4IV ACGT 3 cut(s) 235, 544, 1071
HpyCH4V TGCA 6 cut(s) 640, 715, 1001, 1109, 1297, 1510
HpyF10VI GCNNNNNNNGC 4 cut(s) 75, 884, 1340, 1383
HpyF3I CTNAG 1 cut(s) 1365
HpySE526I ACGT 3 cut(s) 235, 544, 1071
Hsp92I GRCGYC 1 cut(s) 585
Hsp92II CATG 6 cut(s) 82, 163, 187, 316, 640, 776
HspAI GCGC 1 cut(s) 1386
LguI GCTCTTC 1 cut(s) 261
LmnI GCTCC 4 cut(s) 88, 284, 350, 1459
Lsp1109I GCAGC 1 cut(s) 1281
LweI GCATC 1 cut(s) 1484
MaeI CTAG 1 cut(s) 74
MaeII ACGT 3 cut(s) 235, 544, 1071
MaeIII GTNAC 5 cut(s) 236, 509, 920, 1117, 1357
MbiI CCGCTC 1 cut(s) 353
MflI RGATCY 2 cut(s) 415, 871
MhlI GDGCHC 2 cut(s) 252, 1512
MluCI AATT 9 cut(s) 125, 283, 685, 905, 1155, 1225, 1248, 1433, 1522
MlyI GAGTC 2 cut(s) 401, 531
MseI TTAA 3 cut(s) 426, 527, 1173
MslI CAYNNNNRTG 1 cut(s) 261
MspI CCGG 5 cut(s) 32, 519, 801, 1166, 1300
MspR9I CCNGG 2 cut(s) 370, 1166
Mva1269I GAATGC 2 cut(s) 624, 717
MvaI CCWGG 1 cut(s) 370
MvnI CGCG 1 cut(s) 897
MwoI GCNNNNNNNGC 4 cut(s) 75, 884, 1340, 1383
NciI CCSGG 1 cut(s) 1166
NlaIII CATG 6 cut(s) 82, 163, 187, 316, 640, 776
NlaIV GGNNCC 2 cut(s) 796, 1418
NmuCI GTSAC 3 cut(s) 920, 1117, 1357
NspI RCATGY 1 cut(s) 776
PciSI GCTCTTC 1 cut(s) 261
PctI GAATGC 2 cut(s) 624, 717
PfeI GAWTC 6 cut(s) 189, 391, 471, 1053, 1270, 1425
PflFI GACNNNGTC 1 cut(s) 1552
PfoI TCCNGGA 1 cut(s) 1164
PkrI GCNGC 5 cut(s) 355, 820, 899, 1296, 1474
Ple19I CGATCG 1 cut(s) 382
PleI GAGTC 2 cut(s) 401, 531
PpsI GAGTC 2 cut(s) 401, 531
Ppu21I YACGTR 1 cut(s) 1072
PshAI GACNNNNGTC 1 cut(s) 1592
PsiI TTATAA 1 cut(s) 336
Psp1406I AACGTT 1 cut(s) 235
Psp6I CCWGG 1 cut(s) 368
PspEI GGTNACC 1 cut(s) 920
PspFI CCCAGC 1 cut(s) 1573
PspGI CCWGG 1 cut(s) 368
PspN4I GGNNCC 2 cut(s) 796, 1418
PspPI GGNCC 2 cut(s) 852, 995
PsuI RGATCY 2 cut(s) 415, 871
PsyI GACNNNGTC 1 cut(s) 1552
PvuI CGATCG 1 cut(s) 382
RsaI GTAC 4 cut(s) 303, 952, 1070, 1237
RsaNI GTAC 4 cut(s) 302, 951, 1069, 1236
RseI CAYNNNNRTG 1 cut(s) 261
SapI GCTCTTC 1 cut(s) 261
SaqAI TTAA 3 cut(s) 426, 527, 1173
SatI GCNGC 5 cut(s) 354, 819, 898, 1295, 1473
Sau96I GGNCC 2 cut(s) 852, 995
ScaI AGTACT 1 cut(s) 952
SchI GAGTC 2 cut(s) 401, 531
ScrFI CCNGG 2 cut(s) 370, 1166
SduI GDGCHC 2 cut(s) 252, 1512
SfaNI GCATC 1 cut(s) 1484
SfcI CTRYAG 1 cut(s) 411
SinI GGWCC 2 cut(s) 852, 995
SmiMI CAYNNNNRTG 1 cut(s) 261
Sse9I AATT 9 cut(s) 125, 283, 685, 905, 1155, 1225, 1248, 1433, 1522
SsiI CCGC 8 cut(s) 353, 676, 798, 818, 897, 1377, 1472, 1491
SspI AATATT 1 cut(s) 478
SspMI CTAG 1 cut(s) 74
StyD4I CCNGG 2 cut(s) 368, 1164
StyI CCWWGG 2 cut(s) 657, 1241
TaaI ACNGT 4 cut(s) 8, 424, 745, 859
TaiI ACGT 3 cut(s) 238, 547, 1074
TaqI TCGA 6 cut(s) 42, 246, 582, 670, 1278, 1444
TasI AATT 9 cut(s) 125, 283, 685, 905, 1155, 1225, 1248, 1433, 1522
TatI WGTACW 1 cut(s) 950
TauI GCSGC 4 cut(s) 356, 821, 900, 1475
TfiI GAWTC 6 cut(s) 189, 391, 471, 1053, 1270, 1425
Tru1I TTAA 3 cut(s) 426, 527, 1173
Tru9I TTAA 3 cut(s) 426, 527, 1173
TscAI CASTG 3 cut(s) 111, 748, 1573
TseFI GTSAC 3 cut(s) 920, 1117, 1357
TseI GCWGC 1 cut(s) 1294
Tsp45I GTSAC 3 cut(s) 920, 1117, 1357
TspDTI ATGAA 6 cut(s) 279, 753, 843, 1241, 1519, 1552
TspGWI ACGGA 3 cut(s) 807, 956, 1219
TspRI CASTG 3 cut(s) 111, 748, 1573
Tth111I GACNNNGTC 1 cut(s) 1552
VneI GTGCAC 1 cut(s) 1508
VpaK11BI GGWCC 2 cut(s) 852, 995
XapI RAATTY 2 cut(s) 685, 905
XceI RCATGY 1 cut(s) 776
XcmI CCANNNNNNNNNTGG 1 cut(s) 655
XspI CTAG 1 cut(s) 74
ZrmI AGTACT 1 cut(s) 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.