Rmu_sc0001673.1_g000029

Glucomannan 4-beta-mannosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001673.1
Physical Location & Seq
Reverse (-)
136034 .. 140113
4080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001673.1_g000029.1.cds

Sequence Viewer

Length: 1464 bp
atggctgagagtaccaaagttctgataccagagacattccagggtgggagtagctttgacattgcaggccaaattgggctgatttgggagctaatcaaagcgccattgatagttcctctgctcagagttggagtctatgtctcactagccatggctctcatgctctttgtggagagggtctacatgggtattgtcattgttttggtcaaaatgttctggaaaaagccagagaagcgctacaactatgagcctattcaggaggatttggaattgggcagttccaattttccggttgtacttgttcaaatccctatgttcaatgaaagagaggtctacaagatctccattggagctgcatgtgggctgtcgtggccgtccgatcgtcttgtgatccaagtcctggatgattcaactgaccctacaatcaagaaaatggtggaggcagagtgtcagaggtgggcgagcaaaggcataaatgtagtgtaccaaatcagagaaactagaggaggatacaaagcaggggcattgaaagaaggtcttaaacgtagctacgtgaaacactgcgagtacgtggccataatggacgccgatttccgacccgagcctgactatctcaggcgagccatccctttcttggttcagaaccccgaaatcgctttggttcaagctcgttggagattcgtgaacgcggacgagtgcttgctgacaagaatgcaagagatgtcattggattaccatttcacagttgaacaagaagttggttcagcaacacatgccttctttggcttcaacggaactgctggtgtgtggagaattgctgctattaatgaggcaggtgggtggaaagatcgtacaacagtggaggatatggatcttgctgtccgagctggtctcagaggctggaaatttttgtaccttggtgaccttcaggtgaaaagtgaacttcctagtaccttcaatgccttccgttaccagcagcaccgatggtcttgtggtccagctaatctgtttaggaaaatggtcatggaaattgcaatgaataagaaagttacattgtggaagaaattctatgtcatctacagcttcttctttgttaggaagatcattgcccacatggtgactttcttcttttactgtgttgtgcttcccctgaccattttggttcctgaagttcgtgttccaatttggggagcagtttatattccttccatcattaccatccttaactcagttggaactccaaggtcaattcaccttttgttttactggatccttttcgagaatgtgatgtccttgcaccggaccaaggcaactttgattggccttttcgaagccgggagagtcaatgagtgggttgtcaccgagaaactgggagatgctgtcaagaaagcagcagatgctgccaagaacaaaccagcccccaaattcttcaagaaaccaaagttcaagtttggcaacaggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

487

Amino Acids

55.75

Weight (kDa)

9.36

Isoelectric Point (pI)

38.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 824
Acc36I ACCTGC 1 cut(s) 824
AccB7I CCANNNNNTGG 1 cut(s) 400
AccI GTMKAC 2 cut(s) 180, 333
AccII CGCG 1 cut(s) 689
AciI CCGC 1 cut(s) 689
AclWI GGATC 4 cut(s) 385, 879, 1264, 1277
AcoI YGGCCR 2 cut(s) 371, 573
AcsI RAATTY 3 cut(s) 905, 1064, 1424
AcuI CTGAAG 2 cut(s) 911, 1188
AcyI GRCGYC 1 cut(s) 585
AdeI CACNNNGTG 1 cut(s) 1117
AfaI GTAC 7 cut(s) 13, 297, 485, 569, 853, 914, 952
AfeI AGCGCT 1 cut(s) 236
AfiI CCNNNNNNNGG 5 cut(s) 400, 634, 1187, 1299, 1306
AjnI CCWGG 2 cut(s) 39, 399
AjuI GAANNNNNNNTTGG 2 cut(s) 741, 773
AluBI AGCT 8 cut(s) 54, 91, 353, 549, 668, 887, 1001, 1083
AluI AGCT 8 cut(s) 54, 91, 353, 549, 668, 887, 1001, 1083
Alw26I GTCTC 3 cut(s) 26, 145, 896
AlwI GGATC 4 cut(s) 385, 879, 1264, 1277
AlwNI CAGNNNCTG 2 cut(s) 900, 1400
Ama87I CYCGRG 1 cut(s) 599
Aor51HI AGCGCT 1 cut(s) 236
AoxI GGCC 4 cut(s) 67, 371, 573, 1321
ApeKI GCWGC 5 cut(s) 353, 818, 976, 1391, 1400
ApoI RAATTY 3 cut(s) 905, 1064, 1424
AseI ATTAAT 1 cut(s) 825
Asp700I GAANNNNTTC 1 cut(s) 1064
AspLEI GCGC 2 cut(s) 103, 237
AspS9I GGNCC 2 cut(s) 995, 1302
AsuC2I CCSGG 1 cut(s) 1336
AsuHPI GGTGA 5 cut(s) 932, 943, 1129, 1244, 1351
AsuII TTCGAA 1 cut(s) 1329
AvaI CYCGRG 1 cut(s) 599
AvaII GGWCC 2 cut(s) 995, 1302
BalI TGGCCA 1 cut(s) 575
BamHI GGATCC 1 cut(s) 1269
BbvI GCAGC 5 cut(s) 340, 805, 988, 1387, 1403
BccI CCATC 4 cut(s) 632, 978, 1217, 1226
BceAI ACGGC 1 cut(s) 358
BciT130I CCWGG 2 cut(s) 41, 401
BciVI GTATCC 1 cut(s) 503
BcnI CCSGG 1 cut(s) 1336
BcoDI GTCTC 3 cut(s) 26, 145, 896
BfaI CTAG 3 cut(s) 146, 501, 948
BfmI CTRYAG 1 cut(s) 1078
BfoI RGCGCY 2 cut(s) 104, 238
BfuAI ACCTGC 1 cut(s) 824
BfuI GTATCC 1 cut(s) 503
BglII AGATCT 1 cut(s) 339
BisI GCNGC 5 cut(s) 354, 819, 977, 1392, 1401
BlsI GCNGC 5 cut(s) 355, 820, 978, 1393, 1402
Bme1390I CCNGG 3 cut(s) 41, 401, 1336
Bme18I GGWCC 2 cut(s) 995, 1302
BmeT110I CYCGRG 1 cut(s) 599
BmgT120I GGNCC 2 cut(s) 995, 1302
BmiI GGNNCC 2 cut(s) 1164, 1271
BmrFI CCNGG 3 cut(s) 41, 401, 1336
BmrI ACTGGG 1 cut(s) 1379
BmsI GCATC 2 cut(s) 1366, 1387
BmuI ACTGGG 1 cut(s) 1379
BplI GAGNNNNNCTC 2 cut(s) 876, 908
Bpu14I TTCGAA 1 cut(s) 1329
BpuMI CCSGG 1 cut(s) 1336
BsaAI YACGTR 2 cut(s) 553, 571
BsaBI GATNNNNATC 1 cut(s) 870
BsaHI GRCGYC 1 cut(s) 585
BsaI GGTCTC 1 cut(s) 896
BsaJI CCNNGG 5 cut(s) 40, 150, 916, 1241, 1305
BsaWI WCCGGW 2 cut(s) 289, 1299
BsaXI ACNNNNNCTCC 8 cut(s) 123, 153, 326, 356, 431, 461, 1365, 1395
Bsc4I CCNNNNNNNGG 5 cut(s) 400, 634, 1187, 1299, 1306
Bse1I ACTGG 2 cut(s) 1271, 1374
Bse3DI GCAATG 3 cut(s) 60, 1041, 1104
Bse8I GATNNNNATC 1 cut(s) 870
BseBI CCWGG 2 cut(s) 41, 401
BseDI CCNNGG 5 cut(s) 40, 150, 916, 1241, 1305
BseGI GGATG 3 cut(s) 409, 624, 1218
BseJI GATNNNNATC 1 cut(s) 870
BseLI CCNNNNNNNGG 5 cut(s) 400, 634, 1187, 1299, 1306
BseMI GCAATG 3 cut(s) 60, 1041, 1104
BseMII CTCAG 4 cut(s) 136, 628, 907, 1242
BseNI ACTGG 2 cut(s) 1271, 1374
BseRI GAGGAG 1 cut(s) 519
BseXI GCAGC 5 cut(s) 340, 805, 988, 1387, 1403
Bsh1236I CGCG 1 cut(s) 689
Bsh1285I CGRYCG 1 cut(s) 382
BshFI GGCC 4 cut(s) 69, 373, 575, 1323
BsiEI CGRYCG 1 cut(s) 382
BsiHKCI CYCGRG 1 cut(s) 599
BsiSI CCGG 3 cut(s) 290, 1300, 1335
BslI CCNNNNNNNGG 5 cut(s) 400, 634, 1187, 1299, 1306
BsmAI GTCTC 3 cut(s) 26, 145, 896
BsmI GAATGC 1 cut(s) 717
BsnI GGCC 4 cut(s) 69, 373, 575, 1323
Bso31I GGTCTC 1 cut(s) 896
BsoBI CYCGRG 1 cut(s) 599
Bsp119I TTCGAA 1 cut(s) 1329
Bsp143I GATC 7 cut(s) 339, 379, 390, 847, 871, 1101, 1269
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 1 cut(s) 689
BspANI GGCC 4 cut(s) 69, 373, 575, 1323
BspCNI CTCAG 4 cut(s) 135, 627, 906, 1241
BspFNI CGCG 1 cut(s) 689
BspLI GGNNCC 2 cut(s) 1164, 1271
BspMI ACCTGC 1 cut(s) 824
BspPI GGATC 4 cut(s) 385, 879, 1264, 1277
BspT104I TTCGAA 1 cut(s) 1329
BspTNI GGTCTC 1 cut(s) 896
BsrDI GCAATG 3 cut(s) 60, 1041, 1104
BsrI ACTGG 2 cut(s) 1271, 1374
BssECI CCNNGG 5 cut(s) 40, 150, 916, 1241, 1305
BssMI GATC 7 cut(s) 339, 379, 390, 847, 871, 1101, 1269
BssNI GRCGYC 1 cut(s) 585
BssT1I CCWWGG 4 cut(s) 150, 916, 1241, 1305
Bst2UI CCWGG 2 cut(s) 41, 401
Bst4CI ACNGT 3 cut(s) 745, 859, 1136
BstACI GRCGYC 1 cut(s) 585
BstAPI GCANNNNNTGC 3 cut(s) 773, 1397, 1400
BstBAI YACGTR 2 cut(s) 553, 571
BstBI TTCGAA 1 cut(s) 1329
BstC8I GCNNGC 4 cut(s) 67, 463, 621, 701
BstDEI CTNAG 5 cut(s) 6, 122, 614, 893, 1228
BstDSI CCRYGG 1 cut(s) 150
BstEII GGTNACC 1 cut(s) 920
BstF5I GGATG 3 cut(s) 409, 624, 1218
BstFNI CGCG 1 cut(s) 689
BstH2I RGCGCY 2 cut(s) 104, 238
BstHHI GCGC 2 cut(s) 103, 237
BstKTI GATC 7 cut(s) 342, 382, 393, 850, 874, 1104, 1272
BstMAI GTCTC 3 cut(s) 26, 145, 896
BstMBI GATC 7 cut(s) 339, 379, 390, 847, 871, 1101, 1269
BstMCI CGRYCG 1 cut(s) 382
BstMWI GCNNNNNNNGC 6 cut(s) 232, 370, 773, 884, 1397, 1400
BstNI CCWGG 2 cut(s) 41, 401
BstNSI RCATGY 2 cut(s) 360, 776
BstPI GGTNACC 1 cut(s) 920
BstSCI CCNGG 3 cut(s) 39, 399, 1334
BstSFI CTRYAG 1 cut(s) 1078
BstUI CGCG 1 cut(s) 689
BstV1I GCAGC 5 cut(s) 340, 805, 988, 1387, 1403
BstX2I RGATCY 3 cut(s) 339, 871, 1269
BstYI RGATCY 3 cut(s) 339, 871, 1269
BsuI GTATCC 1 cut(s) 503
BsuRI GGCC 4 cut(s) 69, 373, 575, 1323
BtgI CCRYGG 1 cut(s) 150
BtsCI GGATG 3 cut(s) 409, 624, 1218
BtsI GCAGTG 1 cut(s) 559
BtsIMutI CAGTG 2 cut(s) 559, 864
BveI ACCTGC 1 cut(s) 824
Cac8I GCNNGC 4 cut(s) 67, 463, 621, 701
CaiI CAGNNNCTG 2 cut(s) 900, 1400
CfoI GCGC 2 cut(s) 103, 237
Cfr13I GGNCC 2 cut(s) 995, 1302
CseI GACGC 1 cut(s) 593
Csp6I GTAC 7 cut(s) 12, 296, 484, 568, 852, 913, 951
CviAII CATG 7 cut(s) 151, 160, 184, 357, 773, 1024, 1114
CviQI GTAC 7 cut(s) 12, 296, 484, 568, 852, 913, 951
DdeI CTNAG 5 cut(s) 6, 122, 614, 893, 1228
DpnI GATC 7 cut(s) 341, 381, 392, 849, 873, 1103, 1271
DpnII GATC 7 cut(s) 339, 379, 390, 847, 871, 1101, 1269
DraIII CACNNNGTG 1 cut(s) 1117
EaeI YGGCCR 2 cut(s) 371, 573
Eco130I CCWWGG 4 cut(s) 150, 916, 1241, 1305
Eco31I GGTCTC 1 cut(s) 896
Eco47I GGWCC 2 cut(s) 995, 1302
Eco47III AGCGCT 1 cut(s) 236
Eco57I CTGAAG 2 cut(s) 911, 1188
Eco88I CYCGRG 1 cut(s) 599
Eco91I GGTNACC 1 cut(s) 920
EcoO65I GGTNACC 1 cut(s) 920
EcoRII CCWGG 2 cut(s) 39, 399
EcoT14I CCWWGG 4 cut(s) 150, 916, 1241, 1305
ErhI CCWWGG 4 cut(s) 150, 916, 1241, 1305
FaeI CATG 7 cut(s) 154, 163, 187, 360, 776, 1027, 1117
FalI AAGNNNNNCTT 2 cut(s) 522, 554
FatI CATG 7 cut(s) 150, 159, 183, 356, 772, 1023, 1113
FblI GTMKAC 2 cut(s) 180, 333
Fnu4HI GCNGC 5 cut(s) 354, 819, 977, 1392, 1401
FokI GGATG 3 cut(s) 416, 611, 1205
Fsp4HI GCNGC 5 cut(s) 354, 819, 977, 1392, 1401
FspBI CTAG 3 cut(s) 146, 501, 948
GlaI GCGC 2 cut(s) 102, 236
GluI GCNGC 5 cut(s) 354, 819, 977, 1392, 1401
HaeII RGCGCY 2 cut(s) 104, 238
HaeIII GGCC 4 cut(s) 69, 373, 575, 1323
HapII CCGG 3 cut(s) 290, 1300, 1335
HgaI GACGC 1 cut(s) 593
HhaI GCGC 2 cut(s) 103, 237
Hin1I GRCGYC 1 cut(s) 585
Hin1II CATG 7 cut(s) 154, 163, 187, 360, 776, 1027, 1117
Hin6I GCGC 2 cut(s) 101, 235
HinP1I GCGC 2 cut(s) 101, 235
HinfI GANTC 4 cut(s) 132, 407, 678, 1341
HpaII CCGG 3 cut(s) 290, 1300, 1335
HphI GGTGA 5 cut(s) 932, 943, 1129, 1244, 1351
Hpy166II GTNNAC 5 cut(s) 181, 334, 484, 685, 941
Hpy188I TCNGA 9 cut(s) 24, 125, 379, 453, 494, 596, 642, 884, 896
Hpy188III TCNNGA 8 cut(s) 217, 257, 427, 682, 1166, 1279, 1384, 1432
Hpy8I GTNNAC 5 cut(s) 181, 334, 484, 685, 941
HpyAV CCTTC 6 cut(s) 527, 787, 935, 964, 973, 1215
HpyCH4III ACNGT 3 cut(s) 745, 859, 1136
HpyCH4IV ACGT 3 cut(s) 544, 552, 570
HpyCH4V TGCA 5 cut(s) 65, 356, 715, 1034, 1297
HpyF10VI GCNNNNNNNGC 6 cut(s) 232, 370, 773, 884, 1397, 1400
HpyF3I CTNAG 5 cut(s) 6, 122, 614, 893, 1228
HpySE526I ACGT 3 cut(s) 544, 552, 570
Hsp92I GRCGYC 1 cut(s) 585
Hsp92II CATG 7 cut(s) 154, 163, 187, 360, 776, 1027, 1117
HspAI GCGC 2 cut(s) 101, 235
Kzo9I GATC 7 cut(s) 339, 379, 390, 847, 871, 1101, 1269
LmnI GCTCC 3 cut(s) 88, 350, 1190
Lsp1109I GCAGC 5 cut(s) 340, 805, 988, 1387, 1403
LweI GCATC 2 cut(s) 1366, 1387
MaeI CTAG 3 cut(s) 146, 501, 948
MaeII ACGT 3 cut(s) 544, 552, 570
MaeIII GTNAC 5 cut(s) 920, 968, 1048, 1117, 1357
MalI GATC 7 cut(s) 341, 381, 392, 849, 873, 1103, 1271
MboI GATC 7 cut(s) 339, 379, 390, 847, 871, 1101, 1269
MboII GAAGA 5 cut(s) 1072, 1078, 1111, 1117, 1420
MflI RGATCY 3 cut(s) 339, 871, 1269
MlsI TGGCCA 1 cut(s) 575
MluNI TGGCCA 1 cut(s) 575
MlyI GAGTC 2 cut(s) 141, 1350
MmeI TCCRAC 4 cut(s) 109, 619, 653, 1213
Mox20I TGGCCA 1 cut(s) 575
MroXI GAANNNNTTC 1 cut(s) 1064
MscI TGGCCA 1 cut(s) 575
MseI TTAA 3 cut(s) 540, 825, 1224
Msp20I TGGCCA 1 cut(s) 575
MspI CCGG 3 cut(s) 290, 1300, 1335
MspR9I CCNGG 3 cut(s) 41, 401, 1336
Mva1269I GAATGC 1 cut(s) 717
MvaI CCWGG 2 cut(s) 41, 401
MvnI CGCG 1 cut(s) 689
MwoI GCNNNNNNNGC 6 cut(s) 232, 370, 773, 884, 1397, 1400
NciI CCSGG 1 cut(s) 1336
NcoI CCATGG 1 cut(s) 150
NdeII GATC 7 cut(s) 339, 379, 390, 847, 871, 1101, 1269
NlaIII CATG 7 cut(s) 154, 163, 187, 360, 776, 1027, 1117
NlaIV GGNNCC 2 cut(s) 1164, 1271
NmuCI GTSAC 3 cut(s) 920, 1117, 1357
NspI RCATGY 2 cut(s) 360, 776
NspV TTCGAA 1 cut(s) 1329
PaqCI CACCTGC 1 cut(s) 824
PctI GAATGC 1 cut(s) 717
PdmI GAANNNNTTC 1 cut(s) 1064
PfeI GAWTC 2 cut(s) 407, 678
PflMI CCANNNNNTGG 1 cut(s) 400
PfoI TCCNGGA 1 cut(s) 399
PkrI GCNGC 5 cut(s) 355, 820, 978, 1393, 1402
Ple19I CGATCG 1 cut(s) 382
PleI GAGTC 2 cut(s) 140, 1349
PpsI GAGTC 2 cut(s) 140, 1349
Ppu21I YACGTR 2 cut(s) 553, 571
PshBI ATTAAT 1 cut(s) 825
Psp6I CCWGG 2 cut(s) 39, 399
PspEI GGTNACC 1 cut(s) 920
PspGI CCWGG 2 cut(s) 39, 399
PspN4I GGNNCC 2 cut(s) 1164, 1271
PspPI GGNCC 2 cut(s) 995, 1302
PstNI CAGNNNCTG 2 cut(s) 900, 1400
PsuI RGATCY 3 cut(s) 339, 871, 1269
PvuI CGATCG 1 cut(s) 382
RsaI GTAC 7 cut(s) 13, 297, 485, 569, 853, 914, 952
RsaNI GTAC 7 cut(s) 12, 296, 484, 568, 852, 913, 951
SaqAI TTAA 3 cut(s) 540, 825, 1224
SatI GCNGC 5 cut(s) 354, 819, 977, 1392, 1401
Sau3AI GATC 7 cut(s) 339, 379, 390, 847, 871, 1101, 1269
Sau96I GGNCC 2 cut(s) 995, 1302
SchI GAGTC 2 cut(s) 141, 1350
ScrFI CCNGG 3 cut(s) 41, 401, 1336
SfaNI GCATC 2 cut(s) 1366, 1387
SfcI CTRYAG 1 cut(s) 1078
SfuI TTCGAA 1 cut(s) 1329
SinI GGWCC 2 cut(s) 995, 1302
SsiI CCGC 1 cut(s) 689
SspMI CTAG 3 cut(s) 146, 501, 948
StyD4I CCNGG 3 cut(s) 39, 399, 1334
StyI CCWWGG 4 cut(s) 150, 916, 1241, 1305
TaaI ACNGT 3 cut(s) 745, 859, 1136
TaiI ACGT 3 cut(s) 547, 555, 573
TaqI TCGA 2 cut(s) 1278, 1329
TatI WGTACW 1 cut(s) 295
TfiI GAWTC 2 cut(s) 407, 678
Tru1I TTAA 3 cut(s) 540, 825, 1224
Tru9I TTAA 3 cut(s) 540, 825, 1224
TscAI CASTG 2 cut(s) 566, 864
TseFI GTSAC 3 cut(s) 920, 1117, 1357
TseI GCWGC 5 cut(s) 353, 818, 976, 1391, 1400
Tsp45I GTSAC 3 cut(s) 920, 1117, 1357
TspDTI ATGAA 2 cut(s) 336, 1052
TspGWI ACGGA 2 cut(s) 807, 956
TspRI CASTG 2 cut(s) 566, 864
Van91I CCANNNNNTGG 1 cut(s) 400
VpaK11BI GGWCC 2 cut(s) 995, 1302
VspI ATTAAT 1 cut(s) 825
XapI RAATTY 3 cut(s) 905, 1064, 1424
XceI RCATGY 2 cut(s) 360, 776
XcmI CCANNNNNNNNNTGG 1 cut(s) 631
XmiI GTMKAC 2 cut(s) 180, 333
XmnI GAANNNNTTC 1 cut(s) 1064
XspI CTAG 3 cut(s) 146, 501, 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.